HEADER PROTEIN BINDING 10-JAN-19 6J56 TITLE CRYSTAL STRUCTURE OF MYOSIN VI CBD IN COMPLEX WITH TOM1 MBM COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCONVENTIONAL MYOSIN-VI; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CBD DOMAIN; COMPND 5 SYNONYM: UNCONVENTIONAL MYOSIN-6; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPTIDE FROM TARGET OF MYB PROTEIN 1; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MYO6, KIAA0389; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TOM1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS MYOSIN VI, TOM1, COMPLEX, AUTOPHAGY, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR S.HU,L.PAN REVDAT 2 22-NOV-23 6J56 1 REMARK REVDAT 1 21-AUG-19 6J56 0 JRNL AUTH S.HU,Y.GUO,Y.WANG,Y.LI,T.FU,Z.ZHOU,Y.WANG,J.LIU,L.PAN JRNL TITL STRUCTURE OF MYOSIN VI/TOM1 COMPLEX REVEALS A CARGO JRNL TITL 2 RECOGNITION MODE OF MYOSIN VI FOR TETHERING. JRNL REF NAT COMMUN V. 10 3459 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31371777 JRNL DOI 10.1038/S41467-019-11481-6 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 25194 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1252 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4456 - 3.7397 0.95 2784 155 0.1593 0.2210 REMARK 3 2 3.7397 - 2.9687 0.98 2857 145 0.1682 0.2244 REMARK 3 3 2.9687 - 2.5935 0.99 2873 134 0.1851 0.2383 REMARK 3 4 2.5935 - 2.3565 0.98 2822 160 0.1793 0.2221 REMARK 3 5 2.3565 - 2.1876 0.99 2837 138 0.1987 0.2817 REMARK 3 6 2.1876 - 2.0586 0.99 2847 139 0.1791 0.2197 REMARK 3 7 2.0586 - 1.9555 0.90 2603 138 0.1776 0.2176 REMARK 3 8 1.9555 - 1.8704 0.79 2255 135 0.2209 0.2912 REMARK 3 9 1.8704 - 1.7984 0.72 2064 108 0.1920 0.2625 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2331 REMARK 3 ANGLE : 1.163 3126 REMARK 3 CHIRALITY : 0.061 313 REMARK 3 PLANARITY : 0.005 410 REMARK 3 DIHEDRAL : 15.418 910 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1158 THROUGH 1165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.3985 21.7206 71.8482 REMARK 3 T TENSOR REMARK 3 T11: 1.6923 T22: 0.6943 REMARK 3 T33: 1.0207 T12: -0.2841 REMARK 3 T13: -0.0043 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 2.0007 L22: 5.8664 REMARK 3 L33: 7.3959 L12: 4.6382 REMARK 3 L13: -7.0415 L23: -4.5753 REMARK 3 S TENSOR REMARK 3 S11: -0.0026 S12: 0.5564 S13: 2.5673 REMARK 3 S21: 0.0871 S22: 1.1237 S23: -0.9143 REMARK 3 S31: -2.5785 S32: 0.2121 S33: -0.7718 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1166 THROUGH 1174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.9742 9.3337 62.4413 REMARK 3 T TENSOR REMARK 3 T11: 0.1557 T22: 0.0625 REMARK 3 T33: 0.0861 T12: -0.0230 REMARK 3 T13: -0.0103 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 6.0937 L22: 3.9094 REMARK 3 L33: 6.8818 L12: -3.3459 REMARK 3 L13: -4.1945 L23: 4.7370 REMARK 3 S TENSOR REMARK 3 S11: 0.1512 S12: -0.1251 S13: 0.2390 REMARK 3 S21: 0.2618 S22: -0.1249 S23: -0.1204 REMARK 3 S31: -0.0072 S32: -0.1216 S33: -0.0774 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1175 THROUGH 1191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.6482 -7.9386 50.3053 REMARK 3 T TENSOR REMARK 3 T11: 0.5182 T22: 0.3826 REMARK 3 T33: 0.3811 T12: 0.1104 REMARK 3 T13: 0.0474 T23: -0.1800 REMARK 3 L TENSOR REMARK 3 L11: 3.3214 L22: 5.9283 REMARK 3 L33: 0.2694 L12: -0.3951 REMARK 3 L13: -0.8849 L23: 0.5665 REMARK 3 S TENSOR REMARK 3 S11: 0.0509 S12: 1.2740 S13: -1.1343 REMARK 3 S21: -0.5581 S22: -0.0382 S23: -0.2025 REMARK 3 S31: 1.5783 S32: 0.8356 S33: 0.0928 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1192 THROUGH 1230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.9052 1.0903 63.4476 REMARK 3 T TENSOR REMARK 3 T11: 0.1305 T22: 0.0702 REMARK 3 T33: 0.0849 T12: -0.0043 REMARK 3 T13: -0.0066 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 3.4513 L22: 2.1043 REMARK 3 L33: 3.8101 L12: 0.8419 REMARK 3 L13: 1.0611 L23: 1.4432 REMARK 3 S TENSOR REMARK 3 S11: 0.0521 S12: -0.2429 S13: -0.2642 REMARK 3 S21: 0.0370 S22: -0.0345 S23: -0.0184 REMARK 3 S31: 0.1789 S32: -0.0729 S33: 0.0044 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1231 THROUGH 1245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 78.5899 6.0483 62.2610 REMARK 3 T TENSOR REMARK 3 T11: 0.1085 T22: 0.2634 REMARK 3 T33: 0.1371 T12: -0.0169 REMARK 3 T13: 0.0001 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 3.6988 L22: 4.4059 REMARK 3 L33: 2.9211 L12: -0.0379 REMARK 3 L13: -2.0397 L23: -1.1908 REMARK 3 S TENSOR REMARK 3 S11: -0.0309 S12: -0.1833 S13: 0.0232 REMARK 3 S21: 0.0001 S22: -0.1098 S23: -0.3980 REMARK 3 S31: -0.0668 S32: 1.1394 S33: 0.1561 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1246 THROUGH 1274 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.9796 8.5931 62.7226 REMARK 3 T TENSOR REMARK 3 T11: 0.1075 T22: 0.1405 REMARK 3 T33: 0.1126 T12: 0.0369 REMARK 3 T13: -0.0189 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 3.9400 L22: 3.3441 REMARK 3 L33: 4.7255 L12: 0.5753 REMARK 3 L13: -0.8570 L23: 0.1929 REMARK 3 S TENSOR REMARK 3 S11: -0.0124 S12: -0.1377 S13: 0.2228 REMARK 3 S21: 0.0253 S22: 0.0548 S23: 0.2129 REMARK 3 S31: -0.2260 S32: -0.5053 S33: -0.0763 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1275 THROUGH 1282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.7823 16.2699 67.6016 REMARK 3 T TENSOR REMARK 3 T11: 0.3438 T22: 0.1899 REMARK 3 T33: 0.2781 T12: 0.0932 REMARK 3 T13: 0.0045 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 5.6525 L22: 6.8858 REMARK 3 L33: 4.1454 L12: -0.0127 REMARK 3 L13: 2.2808 L23: -1.4609 REMARK 3 S TENSOR REMARK 3 S11: 0.1866 S12: 0.1529 S13: 1.4613 REMARK 3 S21: -0.1583 S22: -0.5320 S23: 0.0910 REMARK 3 S31: -1.2433 S32: -0.5908 S33: -0.1992 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 437 THROUGH 457 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.1689 -7.9552 63.7499 REMARK 3 T TENSOR REMARK 3 T11: 0.5125 T22: 0.2621 REMARK 3 T33: 0.3976 T12: 0.1964 REMARK 3 T13: -0.0735 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 2.5000 L22: 7.0146 REMARK 3 L33: 5.7267 L12: 1.0946 REMARK 3 L13: -0.9240 L23: 0.4440 REMARK 3 S TENSOR REMARK 3 S11: 0.5569 S12: -0.0194 S13: -1.2650 REMARK 3 S21: 0.3280 S22: 0.0615 S23: -1.0363 REMARK 3 S31: 1.4028 S32: 1.2137 S33: -0.1698 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 458 THROUGH 463 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.4546 -9.4766 48.6760 REMARK 3 T TENSOR REMARK 3 T11: 0.4186 T22: 0.1019 REMARK 3 T33: 0.2806 T12: -0.0704 REMARK 3 T13: -0.0551 T23: -0.0401 REMARK 3 L TENSOR REMARK 3 L11: 4.8177 L22: 2.4925 REMARK 3 L33: 3.9798 L12: -1.8045 REMARK 3 L13: -1.7176 L23: -0.2001 REMARK 3 S TENSOR REMARK 3 S11: 0.1853 S12: 0.4787 S13: -0.5532 REMARK 3 S21: -0.6480 S22: 0.3736 S23: -0.2258 REMARK 3 S31: 0.9106 S32: -0.0148 S33: -0.3517 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1166 THROUGH 1191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.8666 7.5762 95.1634 REMARK 3 T TENSOR REMARK 3 T11: 0.1691 T22: 0.1134 REMARK 3 T33: 0.1547 T12: 0.0414 REMARK 3 T13: -0.0268 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 4.8354 L22: 3.0912 REMARK 3 L33: 5.8682 L12: -0.2291 REMARK 3 L13: -0.3881 L23: 3.0932 REMARK 3 S TENSOR REMARK 3 S11: 0.0468 S12: -0.1658 S13: 0.3517 REMARK 3 S21: -0.3670 S22: -0.1232 S23: -0.1271 REMARK 3 S31: -0.6019 S32: -0.1071 S33: -0.1397 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1192 THROUGH 1238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.3428 8.3612 88.5816 REMARK 3 T TENSOR REMARK 3 T11: 0.1078 T22: 0.1263 REMARK 3 T33: 0.0939 T12: 0.0134 REMARK 3 T13: -0.0013 T23: 0.0137 REMARK 3 L TENSOR REMARK 3 L11: 4.0315 L22: 1.6621 REMARK 3 L33: 2.7255 L12: -0.6418 REMARK 3 L13: -0.2491 L23: 0.1914 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: 0.3860 S13: 0.2741 REMARK 3 S21: 0.0406 S22: -0.0208 S23: -0.0318 REMARK 3 S31: -0.0493 S32: 0.0202 S33: 0.0046 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1239 THROUGH 1267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.0526 1.0482 93.8432 REMARK 3 T TENSOR REMARK 3 T11: 0.1437 T22: 0.0662 REMARK 3 T33: 0.0899 T12: -0.0030 REMARK 3 T13: 0.0167 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 6.4289 L22: 1.4565 REMARK 3 L33: 3.4345 L12: -0.5076 REMARK 3 L13: 0.9539 L23: -0.3578 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: -0.1913 S13: -0.3091 REMARK 3 S21: 0.1445 S22: 0.1023 S23: 0.0579 REMARK 3 S31: 0.1780 S32: -0.2075 S33: -0.1642 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1268 THROUGH 1282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.7790 -1.8217 82.4014 REMARK 3 T TENSOR REMARK 3 T11: 0.0996 T22: 0.2396 REMARK 3 T33: 0.1614 T12: -0.0690 REMARK 3 T13: -0.0491 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 5.2397 L22: 5.9494 REMARK 3 L33: 5.1852 L12: -1.5653 REMARK 3 L13: 0.6179 L23: 1.4655 REMARK 3 S TENSOR REMARK 3 S11: 0.2475 S12: 0.4824 S13: -0.3644 REMARK 3 S21: -0.4374 S22: 0.0915 S23: 0.3799 REMARK 3 S31: 0.3032 S32: -0.0942 S33: -0.3159 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 437 THROUGH 457 ) REMARK 3 ORIGIN FOR THE GROUP (A): 78.3658 17.7810 88.5528 REMARK 3 T TENSOR REMARK 3 T11: 0.2395 T22: 0.1959 REMARK 3 T33: 0.3407 T12: -0.0185 REMARK 3 T13: 0.0476 T23: 0.0569 REMARK 3 L TENSOR REMARK 3 L11: 2.8933 L22: 4.7396 REMARK 3 L33: 2.8852 L12: -2.0916 REMARK 3 L13: -0.6860 L23: 0.1955 REMARK 3 S TENSOR REMARK 3 S11: 0.4981 S12: 0.8123 S13: 1.2246 REMARK 3 S21: -0.1305 S22: -0.1251 S23: -0.5653 REMARK 3 S31: -0.3781 S32: -0.0387 S33: -0.4035 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 458 THROUGH 463 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.7635 19.6612 104.1423 REMARK 3 T TENSOR REMARK 3 T11: 0.4756 T22: 0.1842 REMARK 3 T33: 0.3819 T12: 0.0391 REMARK 3 T13: 0.1084 T23: -0.0780 REMARK 3 L TENSOR REMARK 3 L11: 7.9994 L22: 9.1960 REMARK 3 L33: 6.1839 L12: -1.5185 REMARK 3 L13: 2.1104 L23: -0.9860 REMARK 3 S TENSOR REMARK 3 S11: -0.1361 S12: -0.7839 S13: 0.4230 REMARK 3 S21: 0.9812 S22: 0.7511 S23: 0.2873 REMARK 3 S31: -0.0759 S32: -0.1779 S33: 0.4777 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J56 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010481. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97774 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26915 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.798 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.1400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3H8D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, SODIUM ACETATE TRIHYDRATE, REMARK 280 TRIS HYDROCHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.43750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1157 REMARK 465 PRO A 1178 REMARK 465 ALA A 1179 REMARK 465 ASP A 1180 REMARK 465 GLN A 1181 REMARK 465 TYR A 1182 REMARK 465 LYS A 1183 REMARK 465 ASP A 1184 REMARK 465 PRO A 1185 REMARK 465 GLN A 1186 REMARK 465 SER A 1187 REMARK 465 LEU A 1283 REMARK 465 LEU A 1284 REMARK 465 LYS A 1285 REMARK 465 ALA B 1157 REMARK 465 ARG B 1158 REMARK 465 GLN B 1159 REMARK 465 ARG B 1160 REMARK 465 GLU B 1161 REMARK 465 ILE B 1162 REMARK 465 GLU B 1163 REMARK 465 MET B 1164 REMARK 465 ASN B 1165 REMARK 465 PRO B 1178 REMARK 465 ALA B 1179 REMARK 465 ASP B 1180 REMARK 465 GLN B 1181 REMARK 465 TYR B 1182 REMARK 465 LYS B 1183 REMARK 465 ASP B 1184 REMARK 465 PRO B 1185 REMARK 465 GLN B 1186 REMARK 465 SER B 1187 REMARK 465 LEU B 1283 REMARK 465 LEU B 1284 REMARK 465 LYS B 1285 DBREF 6J56 A 1157 1285 UNP Q9UM54 MYO6_HUMAN 1166 1294 DBREF 6J56 C 437 463 UNP O60784 TOM1_HUMAN 437 463 DBREF 6J56 B 1157 1285 UNP Q9UM54 MYO6_HUMAN 1166 1294 DBREF 6J56 D 437 463 UNP O60784 TOM1_HUMAN 437 463 SEQRES 1 A 129 ALA ARG GLN ARG GLU ILE GLU MET ASN ARG GLN GLN ARG SEQRES 2 A 129 PHE PHE ARG ILE PRO PHE ILE ARG PRO ALA ASP GLN TYR SEQRES 3 A 129 LYS ASP PRO GLN SER LYS LYS LYS GLY TRP TRP TYR ALA SEQRES 4 A 129 HIS PHE ASP GLY PRO TRP ILE ALA ARG GLN MET GLU LEU SEQRES 5 A 129 HIS PRO ASP LYS PRO PRO ILE LEU LEU VAL ALA GLY LYS SEQRES 6 A 129 ASP ASP MET GLU MET CYS GLU LEU ASN LEU GLU GLU THR SEQRES 7 A 129 GLY LEU THR ARG LYS ARG GLY ALA GLU ILE LEU PRO ARG SEQRES 8 A 129 GLN PHE GLU GLU ILE TRP GLU ARG CYS GLY GLY ILE GLN SEQRES 9 A 129 TYR LEU GLN ASN ALA ILE GLU SER ARG GLN ALA ARG PRO SEQRES 10 A 129 THR TYR ALA THR ALA MET LEU GLN SER LEU LEU LYS SEQRES 1 C 27 GLY VAL THR SER GLU GLY LYS PHE ASP LYS PHE LEU GLU SEQRES 2 C 27 GLU ARG ALA LYS ALA ALA ASP ARG LEU PRO ASN LEU SER SEQRES 3 C 27 SER SEQRES 1 B 129 ALA ARG GLN ARG GLU ILE GLU MET ASN ARG GLN GLN ARG SEQRES 2 B 129 PHE PHE ARG ILE PRO PHE ILE ARG PRO ALA ASP GLN TYR SEQRES 3 B 129 LYS ASP PRO GLN SER LYS LYS LYS GLY TRP TRP TYR ALA SEQRES 4 B 129 HIS PHE ASP GLY PRO TRP ILE ALA ARG GLN MET GLU LEU SEQRES 5 B 129 HIS PRO ASP LYS PRO PRO ILE LEU LEU VAL ALA GLY LYS SEQRES 6 B 129 ASP ASP MET GLU MET CYS GLU LEU ASN LEU GLU GLU THR SEQRES 7 B 129 GLY LEU THR ARG LYS ARG GLY ALA GLU ILE LEU PRO ARG SEQRES 8 B 129 GLN PHE GLU GLU ILE TRP GLU ARG CYS GLY GLY ILE GLN SEQRES 9 B 129 TYR LEU GLN ASN ALA ILE GLU SER ARG GLN ALA ARG PRO SEQRES 10 B 129 THR TYR ALA THR ALA MET LEU GLN SER LEU LEU LYS SEQRES 1 D 27 GLY VAL THR SER GLU GLY LYS PHE ASP LYS PHE LEU GLU SEQRES 2 D 27 GLU ARG ALA LYS ALA ALA ASP ARG LEU PRO ASN LEU SER SEQRES 3 D 27 SER FORMUL 5 HOH *249(H2 O) HELIX 1 AA1 ARG A 1158 MET A 1164 1 7 HELIX 2 AA2 ASP A 1222 MET A 1226 5 5 HELIX 3 AA3 ASN A 1230 GLY A 1235 1 6 HELIX 4 AA4 LEU A 1236 LYS A 1239 5 4 HELIX 5 AA5 LEU A 1245 CYS A 1256 1 12 HELIX 6 AA6 GLY A 1257 SER A 1268 1 12 HELIX 7 AA7 THR A 1274 GLN A 1281 1 8 HELIX 8 AA8 VAL C 438 ALA C 454 1 17 HELIX 9 AA9 ASP B 1222 MET B 1226 5 5 HELIX 10 AB1 ASN B 1230 GLY B 1235 1 6 HELIX 11 AB2 LEU B 1236 LYS B 1239 5 4 HELIX 12 AB3 LEU B 1245 CYS B 1256 1 12 HELIX 13 AB4 GLY B 1257 SER B 1268 1 12 HELIX 14 AB5 THR B 1274 LEU B 1280 1 7 HELIX 15 AB6 VAL D 438 LYS D 453 1 16 HELIX 16 AB7 ALA D 454 ASP D 456 5 3 SHEET 1 AA1 5 ILE A1215 VAL A1218 0 SHEET 2 AA1 5 TRP A1201 LEU A1208 -1 N GLU A1207 O ILE A1215 SHEET 3 AA1 5 TRP A1192 ASP A1198 -1 N HIS A1196 O ALA A1203 SHEET 4 AA1 5 GLN A1168 PRO A1174 -1 N ILE A1173 O TRP A1193 SHEET 5 AA1 5 GLU A1243 ILE A1244 -1 O ILE A1244 N PHE A1170 SHEET 1 AA2 5 ILE B1215 VAL B1218 0 SHEET 2 AA2 5 TRP B1201 LEU B1208 -1 N GLU B1207 O ILE B1215 SHEET 3 AA2 5 TRP B1192 ASP B1198 -1 N HIS B1196 O ALA B1203 SHEET 4 AA2 5 GLN B1168 PRO B1174 -1 N ARG B1169 O PHE B1197 SHEET 5 AA2 5 GLU B1243 ILE B1244 -1 O ILE B1244 N PHE B1170 CRYST1 40.733 74.875 50.873 90.00 106.34 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024550 0.000000 0.007197 0.00000 SCALE2 0.000000 0.013356 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020484 0.00000