HEADER HYDROLASE 14-JAN-19 6J65 TITLE CRYSTAL STRUCTURE OF HUMAN HINT1 MUTANT COMPLEXING WITH AP4A II COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1; COMPND 3 CHAIN: A, B, D, E; COMPND 4 SYNONYM: ADENOSINE 5'-MONOPHOSPHORAMIDASE,PROTEIN KINASE C INHIBITOR COMPND 5 1,PROTEIN KINASE C-INTERACTING PROTEIN 1,PKCI-1; COMPND 6 EC: 3.-.-.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HINT1, HINT, PKCI1, PRKCNH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE, NUCLEOTIDE BINDING, REGULATION OF TRANSCRIPTION, SIGNAL KEYWDS 2 TRANSDUCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.WANG,P.FANG,M.GUO REVDAT 3 22-NOV-23 6J65 1 REMARK REVDAT 2 08-APR-20 6J65 1 JRNL REVDAT 1 25-SEP-19 6J65 0 JRNL AUTH J.YU,Z.LIU,Y.LIANG,F.LUO,J.ZHANG,C.TIAN,A.MOTZIK,M.ZHENG, JRNL AUTH 2 J.KANG,G.ZHONG,C.LIU,P.FANG,M.GUO,E.RAZIN,J.WANG JRNL TITL SECOND MESSENGER AP4A POLYMERIZES TARGET PROTEIN HINT1 TO JRNL TITL 2 TRANSDUCE SIGNALS IN FC EPSILON RI-ACTIVATED MAST CELLS. JRNL REF NAT COMMUN V. 10 4664 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31604935 JRNL DOI 10.1038/S41467-019-12710-8 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.3 REMARK 3 NUMBER OF REFLECTIONS : 78691 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.4726 - 4.3087 0.98 2930 154 0.1411 0.1554 REMARK 3 2 4.3087 - 3.4212 0.50 1493 78 0.1319 0.1499 REMARK 3 3 3.4212 - 2.9891 0.98 2933 154 0.1472 0.1546 REMARK 3 4 2.9891 - 2.7159 0.91 2723 134 0.1603 0.1791 REMARK 3 5 2.7159 - 2.5213 0.94 2845 147 0.1652 0.2079 REMARK 3 6 2.5213 - 2.3727 0.95 2839 168 0.1709 0.1995 REMARK 3 7 2.3727 - 2.2539 0.82 2214 119 0.1877 0.2096 REMARK 3 8 2.2539 - 2.1558 0.67 1567 78 0.1981 0.1961 REMARK 3 9 2.1558 - 2.0729 0.95 2795 178 0.1778 0.2037 REMARK 3 10 2.0729 - 2.0013 0.95 2863 137 0.1769 0.2364 REMARK 3 11 2.0013 - 1.9388 0.92 2757 143 0.2188 0.2323 REMARK 3 12 1.9388 - 1.8834 0.70 2116 102 0.3152 0.3604 REMARK 3 13 1.8834 - 1.8338 0.89 2673 121 0.2278 0.2959 REMARK 3 14 1.8338 - 1.7890 0.95 2821 164 0.1678 0.2003 REMARK 3 15 1.7890 - 1.7484 0.95 2852 147 0.1675 0.2215 REMARK 3 16 1.7484 - 1.7112 0.94 2794 165 0.1755 0.2397 REMARK 3 17 1.7112 - 1.6769 0.94 2838 157 0.1733 0.1877 REMARK 3 18 1.6769 - 1.6453 0.94 2780 135 0.1840 0.2152 REMARK 3 19 1.6453 - 1.6159 0.94 2822 166 0.1810 0.2003 REMARK 3 20 1.6159 - 1.5885 0.94 2806 131 0.1825 0.2231 REMARK 3 21 1.5885 - 1.5629 0.94 2803 148 0.1925 0.2312 REMARK 3 22 1.5629 - 1.5389 0.94 2791 134 0.2014 0.2108 REMARK 3 23 1.5389 - 1.5162 0.93 2788 165 0.2026 0.2790 REMARK 3 24 1.5162 - 1.4949 0.93 2756 141 0.2187 0.2507 REMARK 3 25 1.4949 - 1.4747 0.93 2870 145 0.2407 0.2760 REMARK 3 26 1.4747 - 1.4555 0.92 2696 145 0.2641 0.2929 REMARK 3 27 1.4555 - 1.4373 0.93 2816 156 0.2649 0.3066 REMARK 3 28 1.4373 - 1.4200 0.92 2757 141 0.2844 0.3197 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -0.0535 0.0334 -0.0090 REMARK 3 T TENSOR REMARK 3 T11: 0.0885 T22: 0.1850 REMARK 3 T33: 0.1037 T12: -0.0172 REMARK 3 T13: -0.0063 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 0.0505 L22: 0.1325 REMARK 3 L33: 0.3241 L12: -0.0151 REMARK 3 L13: -0.0303 L23: 0.1870 REMARK 3 S TENSOR REMARK 3 S11: -0.0047 S12: -0.0014 S13: -0.0008 REMARK 3 S21: -0.0012 S22: 0.0039 S23: -0.0019 REMARK 3 S31: -0.0015 S32: 0.0226 S33: -0.0047 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J65 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010541. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78869 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.47 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4EQE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES PH 7.5, PEG3 350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 LEU A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 ILE A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 ALA A 8 REMARK 465 GLN A 9 REMARK 465 VAL A 10 REMARK 465 ALA A 11 REMARK 465 ARG A 12 REMARK 465 PRO A 13 REMARK 465 GLY A 14 REMARK 465 GLY A 15 REMARK 465 SER B -1 REMARK 465 LEU B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ASP B 3 REMARK 465 GLU B 4 REMARK 465 ILE B 5 REMARK 465 ALA B 6 REMARK 465 LYS B 7 REMARK 465 ALA B 8 REMARK 465 GLN B 9 REMARK 465 VAL B 10 REMARK 465 ALA B 11 REMARK 465 SER D -1 REMARK 465 LEU D 0 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 ASP D 3 REMARK 465 GLU D 4 REMARK 465 ILE D 5 REMARK 465 ALA D 6 REMARK 465 LYS D 7 REMARK 465 ALA D 8 REMARK 465 GLN D 9 REMARK 465 VAL D 10 REMARK 465 ALA D 11 REMARK 465 ARG D 12 REMARK 465 PRO D 13 REMARK 465 GLY D 14 REMARK 465 GLY D 15 REMARK 465 SER E -1 REMARK 465 LEU E 0 REMARK 465 MET E 1 REMARK 465 ALA E 2 REMARK 465 ASP E 3 REMARK 465 GLU E 4 REMARK 465 ILE E 5 REMARK 465 ALA E 6 REMARK 465 LYS E 7 REMARK 465 ALA E 8 REMARK 465 GLN E 9 REMARK 465 VAL E 10 REMARK 465 ALA E 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 67 CG CD OE1 OE2 REMARK 470 ASP A 68 CG OD1 OD2 REMARK 470 ARG B 12 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 LYS D 30 CD CE NZ REMARK 470 GLU D 67 CG CD OE1 OE2 REMARK 470 ASP E 69 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 35 -158.84 -137.09 REMARK 500 ASP E 16 74.19 -106.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 366 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH A 367 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH B 502 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 503 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 504 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH B 505 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B 506 DISTANCE = 7.53 ANGSTROMS REMARK 525 HOH B 507 DISTANCE = 7.65 ANGSTROMS REMARK 525 HOH B 508 DISTANCE = 7.77 ANGSTROMS REMARK 525 HOH D 388 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH D 389 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH D 390 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH D 391 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH D 392 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH D 393 DISTANCE = 7.85 ANGSTROMS REMARK 525 HOH D 394 DISTANCE = 8.75 ANGSTROMS REMARK 525 HOH E 498 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH E 499 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH E 500 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH E 501 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH E 502 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH E 503 DISTANCE = 7.33 ANGSTROMS REMARK 525 HOH E 504 DISTANCE = 7.58 ANGSTROMS REMARK 525 HOH E 505 DISTANCE = 8.62 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue B4P B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE E 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ED3 RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 5ED6 RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 6J53 RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 6J58 RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 6J5S RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 6J5Z RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 6J64 RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION DBREF 6J65 A 1 126 UNP P49773 HINT1_HUMAN 1 126 DBREF 6J65 B 1 126 UNP P49773 HINT1_HUMAN 1 126 DBREF 6J65 D 1 126 UNP P49773 HINT1_HUMAN 1 126 DBREF 6J65 E 1 126 UNP P49773 HINT1_HUMAN 1 126 SEQADV 6J65 SER A -1 UNP P49773 EXPRESSION TAG SEQADV 6J65 LEU A 0 UNP P49773 EXPRESSION TAG SEQADV 6J65 ALA A 114 UNP P49773 HIS 114 ENGINEERED MUTATION SEQADV 6J65 SER B -1 UNP P49773 EXPRESSION TAG SEQADV 6J65 LEU B 0 UNP P49773 EXPRESSION TAG SEQADV 6J65 ALA B 114 UNP P49773 HIS 114 ENGINEERED MUTATION SEQADV 6J65 SER D -1 UNP P49773 EXPRESSION TAG SEQADV 6J65 LEU D 0 UNP P49773 EXPRESSION TAG SEQADV 6J65 ALA D 114 UNP P49773 HIS 114 ENGINEERED MUTATION SEQADV 6J65 SER E -1 UNP P49773 EXPRESSION TAG SEQADV 6J65 LEU E 0 UNP P49773 EXPRESSION TAG SEQADV 6J65 ALA E 114 UNP P49773 HIS 114 ENGINEERED MUTATION SEQRES 1 A 128 SER LEU MET ALA ASP GLU ILE ALA LYS ALA GLN VAL ALA SEQRES 2 A 128 ARG PRO GLY GLY ASP THR ILE PHE GLY LYS ILE ILE ARG SEQRES 3 A 128 LYS GLU ILE PRO ALA LYS ILE ILE PHE GLU ASP ASP ARG SEQRES 4 A 128 CYS LEU ALA PHE HIS ASP ILE SER PRO GLN ALA PRO THR SEQRES 5 A 128 HIS PHE LEU VAL ILE PRO LYS LYS HIS ILE SER GLN ILE SEQRES 6 A 128 SER VAL ALA GLU ASP ASP ASP GLU SER LEU LEU GLY HIS SEQRES 7 A 128 LEU MET ILE VAL GLY LYS LYS CYS ALA ALA ASP LEU GLY SEQRES 8 A 128 LEU ASN LYS GLY TYR ARG MET VAL VAL ASN GLU GLY SER SEQRES 9 A 128 ASP GLY GLY GLN SER VAL TYR HIS VAL HIS LEU ALA VAL SEQRES 10 A 128 LEU GLY GLY ARG GLN MET HIS TRP PRO PRO GLY SEQRES 1 B 128 SER LEU MET ALA ASP GLU ILE ALA LYS ALA GLN VAL ALA SEQRES 2 B 128 ARG PRO GLY GLY ASP THR ILE PHE GLY LYS ILE ILE ARG SEQRES 3 B 128 LYS GLU ILE PRO ALA LYS ILE ILE PHE GLU ASP ASP ARG SEQRES 4 B 128 CYS LEU ALA PHE HIS ASP ILE SER PRO GLN ALA PRO THR SEQRES 5 B 128 HIS PHE LEU VAL ILE PRO LYS LYS HIS ILE SER GLN ILE SEQRES 6 B 128 SER VAL ALA GLU ASP ASP ASP GLU SER LEU LEU GLY HIS SEQRES 7 B 128 LEU MET ILE VAL GLY LYS LYS CYS ALA ALA ASP LEU GLY SEQRES 8 B 128 LEU ASN LYS GLY TYR ARG MET VAL VAL ASN GLU GLY SER SEQRES 9 B 128 ASP GLY GLY GLN SER VAL TYR HIS VAL HIS LEU ALA VAL SEQRES 10 B 128 LEU GLY GLY ARG GLN MET HIS TRP PRO PRO GLY SEQRES 1 D 128 SER LEU MET ALA ASP GLU ILE ALA LYS ALA GLN VAL ALA SEQRES 2 D 128 ARG PRO GLY GLY ASP THR ILE PHE GLY LYS ILE ILE ARG SEQRES 3 D 128 LYS GLU ILE PRO ALA LYS ILE ILE PHE GLU ASP ASP ARG SEQRES 4 D 128 CYS LEU ALA PHE HIS ASP ILE SER PRO GLN ALA PRO THR SEQRES 5 D 128 HIS PHE LEU VAL ILE PRO LYS LYS HIS ILE SER GLN ILE SEQRES 6 D 128 SER VAL ALA GLU ASP ASP ASP GLU SER LEU LEU GLY HIS SEQRES 7 D 128 LEU MET ILE VAL GLY LYS LYS CYS ALA ALA ASP LEU GLY SEQRES 8 D 128 LEU ASN LYS GLY TYR ARG MET VAL VAL ASN GLU GLY SER SEQRES 9 D 128 ASP GLY GLY GLN SER VAL TYR HIS VAL HIS LEU ALA VAL SEQRES 10 D 128 LEU GLY GLY ARG GLN MET HIS TRP PRO PRO GLY SEQRES 1 E 128 SER LEU MET ALA ASP GLU ILE ALA LYS ALA GLN VAL ALA SEQRES 2 E 128 ARG PRO GLY GLY ASP THR ILE PHE GLY LYS ILE ILE ARG SEQRES 3 E 128 LYS GLU ILE PRO ALA LYS ILE ILE PHE GLU ASP ASP ARG SEQRES 4 E 128 CYS LEU ALA PHE HIS ASP ILE SER PRO GLN ALA PRO THR SEQRES 5 E 128 HIS PHE LEU VAL ILE PRO LYS LYS HIS ILE SER GLN ILE SEQRES 6 E 128 SER VAL ALA GLU ASP ASP ASP GLU SER LEU LEU GLY HIS SEQRES 7 E 128 LEU MET ILE VAL GLY LYS LYS CYS ALA ALA ASP LEU GLY SEQRES 8 E 128 LEU ASN LYS GLY TYR ARG MET VAL VAL ASN GLU GLY SER SEQRES 9 E 128 ASP GLY GLY GLN SER VAL TYR HIS VAL HIS LEU ALA VAL SEQRES 10 E 128 LEU GLY GLY ARG GLN MET HIS TRP PRO PRO GLY HET B4P B 201 53 HET EPE E 201 15 HETNAM B4P BIS(ADENOSINE)-5'-TETRAPHOSPHATE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EPE HEPES FORMUL 5 B4P C20 H28 N10 O19 P4 FORMUL 6 EPE C8 H18 N2 O4 S FORMUL 7 HOH *776(H2 O) HELIX 1 AA1 THR A 17 ARG A 24 1 8 HELIX 2 AA2 GLN A 62 ALA A 66 5 5 HELIX 3 AA3 GLU A 67 ASP A 69 5 3 HELIX 4 AA4 ASP A 70 LEU A 88 1 19 HELIX 5 AA5 GLY A 101 GLY A 105 1 5 HELIX 6 AA6 THR B 17 ARG B 24 1 8 HELIX 7 AA7 GLN B 62 ALA B 66 5 5 HELIX 8 AA8 GLU B 67 ASP B 69 5 3 HELIX 9 AA9 ASP B 70 LEU B 88 1 19 HELIX 10 AB1 GLY B 101 GLY B 105 1 5 HELIX 11 AB2 THR D 17 ARG D 24 1 8 HELIX 12 AB3 GLN D 62 ALA D 66 5 5 HELIX 13 AB4 GLU D 67 ASP D 69 5 3 HELIX 14 AB5 ASP D 70 LEU D 88 1 19 HELIX 15 AB6 GLY D 101 GLY D 105 1 5 HELIX 16 AB7 THR E 17 ARG E 24 1 8 HELIX 17 AB8 GLN E 62 ALA E 66 5 5 HELIX 18 AB9 GLU E 67 ASP E 69 5 3 HELIX 19 AC1 ASP E 70 LEU E 88 1 19 HELIX 20 AC2 GLY E 101 GLY E 105 1 5 SHEET 1 AA110 ILE A 31 GLU A 34 0 SHEET 2 AA110 CYS A 38 HIS A 42 -1 O ALA A 40 N ILE A 32 SHEET 3 AA110 THR A 50 PRO A 56 -1 O ILE A 55 N LEU A 39 SHEET 4 AA110 LEU A 113 GLY A 117 -1 O VAL A 115 N PHE A 52 SHEET 5 AA110 TYR A 94 GLU A 100 -1 N VAL A 97 O ALA A 114 SHEET 6 AA110 TYR B 94 GLU B 100 -1 O MET B 96 N VAL A 98 SHEET 7 AA110 LEU B 113 GLY B 117 -1 O ALA B 114 N VAL B 97 SHEET 8 AA110 THR B 50 PRO B 56 -1 N PHE B 52 O VAL B 115 SHEET 9 AA110 CYS B 38 HIS B 42 -1 N PHE B 41 O LEU B 53 SHEET 10 AA110 ILE B 31 GLU B 34 -1 N ILE B 32 O ALA B 40 SHEET 1 AA210 ILE D 31 GLU D 34 0 SHEET 2 AA210 CYS D 38 HIS D 42 -1 O ALA D 40 N ILE D 32 SHEET 3 AA210 THR D 50 PRO D 56 -1 O LEU D 53 N PHE D 41 SHEET 4 AA210 LEU D 113 GLY D 117 -1 O VAL D 115 N PHE D 52 SHEET 5 AA210 TYR D 94 GLU D 100 -1 N VAL D 97 O ALA D 114 SHEET 6 AA210 TYR E 94 GLU E 100 -1 O MET E 96 N VAL D 98 SHEET 7 AA210 LEU E 113 GLY E 117 -1 O ALA E 114 N VAL E 97 SHEET 8 AA210 THR E 50 PRO E 56 -1 N VAL E 54 O LEU E 113 SHEET 9 AA210 CYS E 38 HIS E 42 -1 N PHE E 41 O LEU E 53 SHEET 10 AA210 ILE E 31 GLU E 34 -1 N ILE E 32 O ALA E 40 CISPEP 1 TRP A 123 PRO A 124 0 4.28 CISPEP 2 TRP B 123 PRO B 124 0 -0.81 CISPEP 3 TRP D 123 PRO D 124 0 6.06 CISPEP 4 TRP E 123 PRO E 124 0 -0.38 SITE 1 AC1 36 ILE B 18 PHE B 19 PHE B 41 HIS B 42 SITE 2 AC1 36 ASP B 43 ILE B 44 SER B 45 LEU B 53 SITE 3 AC1 36 GLY B 105 SER B 107 VAL B 108 HIS B 112 SITE 4 AC1 36 HOH B 303 HOH B 307 HOH B 310 HOH B 320 SITE 5 AC1 36 HOH B 344 HOH B 355 HOH B 356 HOH B 371 SITE 6 AC1 36 HOH B 375 HOH B 377 HOH B 384 HOH B 388 SITE 7 AC1 36 HOH B 407 HOH B 412 HOH B 413 ILE E 18 SITE 8 AC1 36 ILE E 22 ILE E 44 SER E 107 VAL E 108 SITE 9 AC1 36 EPE E 201 HOH E 301 HOH E 363 HOH E 378 SITE 1 AC2 11 THR B 17 ILE B 18 ILE B 44 VAL B 108 SITE 2 AC2 11 B4P B 201 SER E 107 VAL E 108 TYR E 109 SITE 3 AC2 11 HOH E 301 HOH E 331 HOH E 398 CRYST1 46.300 46.573 64.246 98.06 89.82 118.25 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021598 0.011604 0.001783 0.00000 SCALE2 0.000000 0.024374 0.003889 0.00000 SCALE3 0.000000 0.000000 0.015762 0.00000