HEADER TRANSFERASE/TRANSFERASE INHIBITOR 15-JAN-19 6J6M TITLE CO-CRYSTAL STRUCTURE OF BTK KINASE DOMAIN WITH ZANUBRUTINIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE BTK; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AGAMMAGLOBULINEMIA TYROSINE KINASE,ATK,B-CELL PROGENITOR COMPND 5 KINASE,BPK,BRUTON TYROSINE KINASE; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BTK, AGMX1, ATK, BPK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS KINASE, INHIBITOR, COMPLEX, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHOU,Y.HONG REVDAT 2 22-NOV-23 6J6M 1 REMARK REVDAT 1 23-OCT-19 6J6M 0 JRNL AUTH Y.GUO,Y.LIU,N.HU,D.YU,C.ZHOU,G.SHI,B.ZHANG,M.WEI,J.LIU, JRNL AUTH 2 L.LUO,Z.TANG,H.SONG,Y.GUO,X.LIU,D.SU,S.ZHANG,X.SONG,X.ZHOU, JRNL AUTH 3 Y.HONG,S.CHEN,Z.CHENG,S.YOUNG,Q.WEI,H.WANG,Q.WANG,L.LV, JRNL AUTH 4 F.WANG,H.XU,H.SUN,H.XING,N.LI,W.ZHANG,Z.WANG,G.LIU,Z.SUN, JRNL AUTH 5 D.ZHOU,W.LI,L.LIU,L.WANG,Z.WANG JRNL TITL DISCOVERY OF ZANUBRUTINIB (BGB-3111), A NOVEL, POTENT, AND JRNL TITL 2 SELECTIVE COVALENT INHIBITOR OF BRUTON'S TYROSINE KINASE. JRNL REF J.MED.CHEM. V. 62 7923 2019 JRNL REFN ISSN 0022-2623 JRNL PMID 31381333 JRNL DOI 10.1021/ACS.JMEDCHEM.9B00687 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1-2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 75004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.670 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.2911 - 3.0836 1.00 5502 150 0.1595 0.1510 REMARK 3 2 3.0836 - 2.4476 1.00 5303 146 0.1663 0.1612 REMARK 3 3 2.4476 - 2.1382 1.00 5215 143 0.1575 0.1724 REMARK 3 4 2.1382 - 1.9427 1.00 5206 143 0.1543 0.1651 REMARK 3 5 1.9427 - 1.8035 1.00 5154 141 0.1571 0.1750 REMARK 3 6 1.8035 - 1.6971 1.00 5185 142 0.1539 0.1863 REMARK 3 7 1.6971 - 1.6122 1.00 5152 141 0.1455 0.1738 REMARK 3 8 1.6122 - 1.5420 1.00 5134 141 0.1399 0.1536 REMARK 3 9 1.5420 - 1.4826 1.00 5135 140 0.1448 0.1562 REMARK 3 10 1.4826 - 1.4314 1.00 5127 140 0.1474 0.1596 REMARK 3 11 1.4314 - 1.3867 0.99 5126 141 0.1549 0.1545 REMARK 3 12 1.3867 - 1.3470 0.92 4698 129 0.1587 0.1717 REMARK 3 13 1.3470 - 1.3116 0.83 4215 115 0.1629 0.1494 REMARK 3 14 1.3116 - 1.2796 0.74 3831 106 0.1715 0.2109 REMARK 3 15 1.2796 - 1.2505 0.59 3021 82 0.1982 0.1884 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.060 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2348 REMARK 3 ANGLE : 0.939 3154 REMARK 3 CHIRALITY : 0.083 324 REMARK 3 PLANARITY : 0.005 397 REMARK 3 DIHEDRAL : 29.890 907 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -5.8468 19.6840 120.9678 REMARK 3 T TENSOR REMARK 3 T11: 0.0549 T22: 0.0486 REMARK 3 T33: 0.0491 T12: -0.0064 REMARK 3 T13: -0.0001 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.0424 L22: 0.4299 REMARK 3 L33: 0.5953 L12: -0.1253 REMARK 3 L13: -0.0490 L23: -0.0537 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: 0.1295 S13: -0.0792 REMARK 3 S21: -0.0377 S22: -0.0022 S23: 0.0451 REMARK 3 S31: 0.0240 S32: -0.0371 S33: 0.0017 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J6M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010551. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97894 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75073 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 42.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 56.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.26300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5P9J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MIB BUFFER PH7, 25% (W/V) PEG REMARK 280 1500, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.99400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.21450 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.99400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.21450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 391 REMARK 465 SER A 392 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1058 O HOH A 1122 1.89 REMARK 500 O ASN A 526 O HOH A 801 1.92 REMARK 500 O HOH A 846 O HOH A 1178 1.94 REMARK 500 O HOH A 893 O HOH A 1130 1.98 REMARK 500 O HOH A 1018 O HOH A 1228 1.99 REMARK 500 O HOH A 1092 O HOH A 1096 2.04 REMARK 500 O HOH A 1085 O HOH A 1090 2.08 REMARK 500 O HOH A 835 O HOH A 1092 2.08 REMARK 500 OE2 GLU A 455 O HOH A 802 2.09 REMARK 500 OE1 GLU A 608 O HOH A 803 2.10 REMARK 500 O HOH A 1026 O HOH A 1072 2.11 REMARK 500 O HOH A 1118 O HOH A 1140 2.13 REMARK 500 O HOH A 1142 O HOH A 1222 2.13 REMARK 500 O HOH A 1072 O HOH A 1148 2.15 REMARK 500 OE2 GLU A 455 O HOH A 804 2.15 REMARK 500 O HOH A 1148 O HOH A 1161 2.15 REMARK 500 O HOH A 1075 O HOH A 1131 2.17 REMARK 500 O HOH A 1077 O HOH A 1200 2.17 REMARK 500 NE ARG A 468 O HOH A 805 2.18 REMARK 500 O HOH A 835 O HOH A 1066 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 951 O HOH A 980 1655 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 520 -11.37 78.61 REMARK 500 ASP A 521 52.07 -153.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1237 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A1238 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A1239 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH A1240 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A1241 DISTANCE = 7.75 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BA0 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 702 DBREF 6J6M A 393 659 UNP Q06187 BTK_HUMAN 393 659 SEQADV 6J6M GLY A 391 UNP Q06187 EXPRESSION TAG SEQADV 6J6M SER A 392 UNP Q06187 EXPRESSION TAG SEQRES 1 A 269 GLY SER GLY SER TRP GLU ILE ASP PRO LYS ASP LEU THR SEQRES 2 A 269 PHE LEU LYS GLU LEU GLY THR GLY GLN PHE GLY VAL VAL SEQRES 3 A 269 LYS TYR GLY LYS TRP ARG GLY GLN TYR ASP VAL ALA ILE SEQRES 4 A 269 LYS MET ILE LYS GLU GLY SER MET SER GLU ASP GLU PHE SEQRES 5 A 269 ILE GLU GLU ALA LYS VAL MET MET ASN LEU SER HIS GLU SEQRES 6 A 269 LYS LEU VAL GLN LEU TYR GLY VAL CYS THR LYS GLN ARG SEQRES 7 A 269 PRO ILE PHE ILE ILE THR GLU TYR MET ALA ASN GLY CYS SEQRES 8 A 269 LEU LEU ASN TYR LEU ARG GLU MET ARG HIS ARG PHE GLN SEQRES 9 A 269 THR GLN GLN LEU LEU GLU MET CYS LYS ASP VAL CYS GLU SEQRES 10 A 269 ALA MET GLU TYR LEU GLU SER LYS GLN PHE LEU HIS ARG SEQRES 11 A 269 ASP LEU ALA ALA ARG ASN CYS LEU VAL ASN ASP GLN GLY SEQRES 12 A 269 VAL VAL LYS VAL SER ASP PHE GLY LEU SER ARG TYR VAL SEQRES 13 A 269 LEU ASP ASP GLU TYR THR SER SER VAL GLY SER LYS PHE SEQRES 14 A 269 PRO VAL ARG TRP SER PRO PRO GLU VAL LEU MET TYR SER SEQRES 15 A 269 LYS PHE SER SER LYS SER ASP ILE TRP ALA PHE GLY VAL SEQRES 16 A 269 LEU MET TRP GLU ILE TYR SER LEU GLY LYS MET PRO TYR SEQRES 17 A 269 GLU ARG PHE THR ASN SER GLU THR ALA GLU HIS ILE ALA SEQRES 18 A 269 GLN GLY LEU ARG LEU TYR ARG PRO HIS LEU ALA SER GLU SEQRES 19 A 269 LYS VAL TYR THR ILE MET TYR SER CYS TRP HIS GLU LYS SEQRES 20 A 269 ALA ASP GLU ARG PRO THR PHE LYS ILE LEU LEU SER ASN SEQRES 21 A 269 ILE LEU ASP VAL MET ASP GLU GLU SER HET BA0 A 701 35 HET IMD A 702 10 HETNAM BA0 (7S)-2-(4-PHENOXYPHENYL)-7-(1-PROPANOYLPIPERIDIN-4-YL)- HETNAM 2 BA0 4,5,6,7-TETRAHYDROPYRAZOLO[1,5-A]PYRIMIDINE-3- HETNAM 3 BA0 CARBOXAMIDE HETNAM IMD IMIDAZOLE HETSYN BA0 ZANUBRUTINIB FORMUL 2 BA0 C27 H31 N5 O3 FORMUL 3 IMD C3 H5 N2 1+ FORMUL 4 HOH *441(H2 O) HELIX 1 AA1 ASP A 398 LYS A 400 5 3 HELIX 2 AA2 SER A 438 ASN A 451 1 14 HELIX 3 AA3 LEU A 482 GLU A 488 1 7 HELIX 4 AA4 MET A 489 ARG A 492 5 4 HELIX 5 AA5 GLN A 494 LYS A 515 1 22 HELIX 6 AA6 ALA A 523 ARG A 525 5 3 HELIX 7 AA7 GLY A 541 VAL A 546 5 6 HELIX 8 AA8 ASP A 548 THR A 552 5 5 HELIX 9 AA9 PRO A 560 SER A 564 5 5 HELIX 10 AB1 PRO A 565 SER A 572 1 8 HELIX 11 AB2 SER A 575 SER A 592 1 18 HELIX 12 AB3 THR A 602 GLN A 612 1 11 HELIX 13 AB4 SER A 623 CYS A 633 1 11 HELIX 14 AB5 LYS A 637 ARG A 641 5 5 HELIX 15 AB6 THR A 643 SER A 659 1 17 SHEET 1 AA1 5 LEU A 402 GLY A 411 0 SHEET 2 AA1 5 GLY A 414 TRP A 421 -1 O TYR A 418 N LYS A 406 SHEET 3 AA1 5 TYR A 425 ILE A 432 -1 O ILE A 429 N LYS A 417 SHEET 4 AA1 5 ILE A 470 THR A 474 -1 O ILE A 470 N ILE A 432 SHEET 5 AA1 5 LEU A 460 CYS A 464 -1 N GLY A 462 O ILE A 473 SHEET 1 AA2 3 GLY A 480 CYS A 481 0 SHEET 2 AA2 3 CYS A 527 VAL A 529 -1 O VAL A 529 N GLY A 480 SHEET 3 AA2 3 VAL A 535 VAL A 537 -1 O LYS A 536 N LEU A 528 LINK SG CYS A 481 C15 BA0 A 701 1555 1555 1.81 CISPEP 1 ARG A 468 PRO A 469 0 2.12 SITE 1 AC1 20 LEU A 408 VAL A 416 ALA A 428 LYS A 430 SITE 2 AC1 20 MET A 449 THR A 474 GLU A 475 TYR A 476 SITE 3 AC1 20 MET A 477 GLY A 480 CYS A 481 ARG A 525 SITE 4 AC1 20 LEU A 528 SER A 538 ASP A 539 PHE A 540 SITE 5 AC1 20 HOH A 987 HOH A1013 HOH A1048 HOH A1070 SITE 1 AC2 8 ARG A 562 MET A 596 GLU A 599 PHE A 601 SITE 2 AC2 8 SER A 649 LEU A 652 ASP A 653 HOH A 969 CRYST1 37.924 71.988 104.429 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026369 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009576 0.00000