data_6J7V # _entry.id 6J7V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6J7V pdb_00006j7v 10.2210/pdb6j7v/pdb WWPDB D_1300010445 ? ? EMDB EMD-9779 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-03-06 2 'Structure model' 1 1 2020-08-05 3 'Structure model' 1 2 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' em_imaging_optics 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' em_3d_fitting_list 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_em_imaging_optics.phase_plate' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_em_3d_fitting_list.accession_code' 5 3 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 6 3 'Structure model' '_em_3d_fitting_list.source_name' 7 3 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6J7V _pdbx_database_status.recvd_initial_deposition_date 2019-01-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '6QGL contains the same protein before fitting' 6Q6L unspecified EMDB 'Structure of HRPV6 VP5 fitted in the cryoEM density of the spike' EMD-9779 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'El Omari, K.' 1 ? 'Li, S.' 2 ? 'Huiskonen, J.T.' 3 ? 'Stuart, D.I.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 846 _citation.page_last 846 _citation.title 'The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-019-08728-7 _citation.pdbx_database_id_PubMed 30783086 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'El Omari, K.' 1 0000-0003-3506-6045 primary 'Li, S.' 2 0000-0002-9353-0355 primary 'Kotecha, A.' 3 0000-0002-4480-5439 primary 'Walter, T.S.' 4 0000-0002-0030-7235 primary 'Bignon, E.A.' 5 ? primary 'Harlos, K.' 6 0000-0002-7266-4354 primary 'Somerharju, P.' 7 0000-0003-0623-7538 primary 'De Haas, F.' 8 0000-0002-4544-5156 primary 'Clare, D.K.' 9 ? primary 'Molin, M.' 10 0000-0002-4444-1276 primary 'Hurtado, F.' 11 ? primary 'Li, M.' 12 0000-0002-1905-9497 primary 'Grimes, J.M.' 13 0000-0001-9698-0389 primary 'Bamford, D.H.' 14 0000-0002-6438-8118 primary 'Tischler, N.D.' 15 0000-0002-4578-4780 primary 'Huiskonen, J.T.' 16 ? primary 'Stuart, D.I.' 17 0000-0002-3426-4210 primary 'Roine, E.' 18 0000-0001-8946-7018 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description VP5 _entity.formula_weight 57333.914 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IAPLVGYAIGAAAISAVGGIGVGWTLREFEVVGSDDPAEGLTPDVLRNQLSDSVVKRKSNNQSTMVDNQNILDGVEHTAY TEAKIAAIEELNAGSSESAVLSAANSAIDSYETTVRTNFYKSWNETVRELEAMTQTVIAHADVGLSYITDFGDPRFGNLA SGTSPNTLKDTTVSMPDGTNFTLLTFRHNTGWDSGNAAYSVVEYNPKEVVTSTNSNTYNTVDGTQYMKFSEWNAVETEMD TVFQNVRNGISTWVTNVYGDVQSGAIEISDLVTPRERATMMAQEEGMSQAIADLIALNVPVDAEREATITIQDTGATLPG TFALTDSSDGPLSAGQTYDPSTFSGDVYFTADMSLVEGPWDAINSGVDGGTITITSEPYEGTAIEVTTVESETVSVPAAD WTDNGDGTWSYDASGDLETTITNVDSARFVSTATETTYDTLQLKGAFTVDKLVNKQSGEEVSSTSFTSSEPQTDSNYITQ DEWDQLEQQNKELIEKYEQSQSGGGLDLGGLDMFGVPGEMVAVGAAAVIGFLMLGNN ; _entity_poly.pdbx_seq_one_letter_code_can ;IAPLVGYAIGAAAISAVGGIGVGWTLREFEVVGSDDPAEGLTPDVLRNQLSDSVVKRKSNNQSTMVDNQNILDGVEHTAY TEAKIAAIEELNAGSSESAVLSAANSAIDSYETTVRTNFYKSWNETVRELEAMTQTVIAHADVGLSYITDFGDPRFGNLA SGTSPNTLKDTTVSMPDGTNFTLLTFRHNTGWDSGNAAYSVVEYNPKEVVTSTNSNTYNTVDGTQYMKFSEWNAVETEMD TVFQNVRNGISTWVTNVYGDVQSGAIEISDLVTPRERATMMAQEEGMSQAIADLIALNVPVDAEREATITIQDTGATLPG TFALTDSSDGPLSAGQTYDPSTFSGDVYFTADMSLVEGPWDAINSGVDGGTITITSEPYEGTAIEVTTVESETVSVPAAD WTDNGDGTWSYDASGDLETTITNVDSARFVSTATETTYDTLQLKGAFTVDKLVNKQSGEEVSSTSFTSSEPQTDSNYITQ DEWDQLEQQNKELIEKYEQSQSGGGLDLGGLDMFGVPGEMVAVGAAAVIGFLMLGNN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ALA n 1 3 PRO n 1 4 LEU n 1 5 VAL n 1 6 GLY n 1 7 TYR n 1 8 ALA n 1 9 ILE n 1 10 GLY n 1 11 ALA n 1 12 ALA n 1 13 ALA n 1 14 ILE n 1 15 SER n 1 16 ALA n 1 17 VAL n 1 18 GLY n 1 19 GLY n 1 20 ILE n 1 21 GLY n 1 22 VAL n 1 23 GLY n 1 24 TRP n 1 25 THR n 1 26 LEU n 1 27 ARG n 1 28 GLU n 1 29 PHE n 1 30 GLU n 1 31 VAL n 1 32 VAL n 1 33 GLY n 1 34 SER n 1 35 ASP n 1 36 ASP n 1 37 PRO n 1 38 ALA n 1 39 GLU n 1 40 GLY n 1 41 LEU n 1 42 THR n 1 43 PRO n 1 44 ASP n 1 45 VAL n 1 46 LEU n 1 47 ARG n 1 48 ASN n 1 49 GLN n 1 50 LEU n 1 51 SER n 1 52 ASP n 1 53 SER n 1 54 VAL n 1 55 VAL n 1 56 LYS n 1 57 ARG n 1 58 LYS n 1 59 SER n 1 60 ASN n 1 61 ASN n 1 62 GLN n 1 63 SER n 1 64 THR n 1 65 MET n 1 66 VAL n 1 67 ASP n 1 68 ASN n 1 69 GLN n 1 70 ASN n 1 71 ILE n 1 72 LEU n 1 73 ASP n 1 74 GLY n 1 75 VAL n 1 76 GLU n 1 77 HIS n 1 78 THR n 1 79 ALA n 1 80 TYR n 1 81 THR n 1 82 GLU n 1 83 ALA n 1 84 LYS n 1 85 ILE n 1 86 ALA n 1 87 ALA n 1 88 ILE n 1 89 GLU n 1 90 GLU n 1 91 LEU n 1 92 ASN n 1 93 ALA n 1 94 GLY n 1 95 SER n 1 96 SER n 1 97 GLU n 1 98 SER n 1 99 ALA n 1 100 VAL n 1 101 LEU n 1 102 SER n 1 103 ALA n 1 104 ALA n 1 105 ASN n 1 106 SER n 1 107 ALA n 1 108 ILE n 1 109 ASP n 1 110 SER n 1 111 TYR n 1 112 GLU n 1 113 THR n 1 114 THR n 1 115 VAL n 1 116 ARG n 1 117 THR n 1 118 ASN n 1 119 PHE n 1 120 TYR n 1 121 LYS n 1 122 SER n 1 123 TRP n 1 124 ASN n 1 125 GLU n 1 126 THR n 1 127 VAL n 1 128 ARG n 1 129 GLU n 1 130 LEU n 1 131 GLU n 1 132 ALA n 1 133 MET n 1 134 THR n 1 135 GLN n 1 136 THR n 1 137 VAL n 1 138 ILE n 1 139 ALA n 1 140 HIS n 1 141 ALA n 1 142 ASP n 1 143 VAL n 1 144 GLY n 1 145 LEU n 1 146 SER n 1 147 TYR n 1 148 ILE n 1 149 THR n 1 150 ASP n 1 151 PHE n 1 152 GLY n 1 153 ASP n 1 154 PRO n 1 155 ARG n 1 156 PHE n 1 157 GLY n 1 158 ASN n 1 159 LEU n 1 160 ALA n 1 161 SER n 1 162 GLY n 1 163 THR n 1 164 SER n 1 165 PRO n 1 166 ASN n 1 167 THR n 1 168 LEU n 1 169 LYS n 1 170 ASP n 1 171 THR n 1 172 THR n 1 173 VAL n 1 174 SER n 1 175 MET n 1 176 PRO n 1 177 ASP n 1 178 GLY n 1 179 THR n 1 180 ASN n 1 181 PHE n 1 182 THR n 1 183 LEU n 1 184 LEU n 1 185 THR n 1 186 PHE n 1 187 ARG n 1 188 HIS n 1 189 ASN n 1 190 THR n 1 191 GLY n 1 192 TRP n 1 193 ASP n 1 194 SER n 1 195 GLY n 1 196 ASN n 1 197 ALA n 1 198 ALA n 1 199 TYR n 1 200 SER n 1 201 VAL n 1 202 VAL n 1 203 GLU n 1 204 TYR n 1 205 ASN n 1 206 PRO n 1 207 LYS n 1 208 GLU n 1 209 VAL n 1 210 VAL n 1 211 THR n 1 212 SER n 1 213 THR n 1 214 ASN n 1 215 SER n 1 216 ASN n 1 217 THR n 1 218 TYR n 1 219 ASN n 1 220 THR n 1 221 VAL n 1 222 ASP n 1 223 GLY n 1 224 THR n 1 225 GLN n 1 226 TYR n 1 227 MET n 1 228 LYS n 1 229 PHE n 1 230 SER n 1 231 GLU n 1 232 TRP n 1 233 ASN n 1 234 ALA n 1 235 VAL n 1 236 GLU n 1 237 THR n 1 238 GLU n 1 239 MET n 1 240 ASP n 1 241 THR n 1 242 VAL n 1 243 PHE n 1 244 GLN n 1 245 ASN n 1 246 VAL n 1 247 ARG n 1 248 ASN n 1 249 GLY n 1 250 ILE n 1 251 SER n 1 252 THR n 1 253 TRP n 1 254 VAL n 1 255 THR n 1 256 ASN n 1 257 VAL n 1 258 TYR n 1 259 GLY n 1 260 ASP n 1 261 VAL n 1 262 GLN n 1 263 SER n 1 264 GLY n 1 265 ALA n 1 266 ILE n 1 267 GLU n 1 268 ILE n 1 269 SER n 1 270 ASP n 1 271 LEU n 1 272 VAL n 1 273 THR n 1 274 PRO n 1 275 ARG n 1 276 GLU n 1 277 ARG n 1 278 ALA n 1 279 THR n 1 280 MET n 1 281 MET n 1 282 ALA n 1 283 GLN n 1 284 GLU n 1 285 GLU n 1 286 GLY n 1 287 MET n 1 288 SER n 1 289 GLN n 1 290 ALA n 1 291 ILE n 1 292 ALA n 1 293 ASP n 1 294 LEU n 1 295 ILE n 1 296 ALA n 1 297 LEU n 1 298 ASN n 1 299 VAL n 1 300 PRO n 1 301 VAL n 1 302 ASP n 1 303 ALA n 1 304 GLU n 1 305 ARG n 1 306 GLU n 1 307 ALA n 1 308 THR n 1 309 ILE n 1 310 THR n 1 311 ILE n 1 312 GLN n 1 313 ASP n 1 314 THR n 1 315 GLY n 1 316 ALA n 1 317 THR n 1 318 LEU n 1 319 PRO n 1 320 GLY n 1 321 THR n 1 322 PHE n 1 323 ALA n 1 324 LEU n 1 325 THR n 1 326 ASP n 1 327 SER n 1 328 SER n 1 329 ASP n 1 330 GLY n 1 331 PRO n 1 332 LEU n 1 333 SER n 1 334 ALA n 1 335 GLY n 1 336 GLN n 1 337 THR n 1 338 TYR n 1 339 ASP n 1 340 PRO n 1 341 SER n 1 342 THR n 1 343 PHE n 1 344 SER n 1 345 GLY n 1 346 ASP n 1 347 VAL n 1 348 TYR n 1 349 PHE n 1 350 THR n 1 351 ALA n 1 352 ASP n 1 353 MET n 1 354 SER n 1 355 LEU n 1 356 VAL n 1 357 GLU n 1 358 GLY n 1 359 PRO n 1 360 TRP n 1 361 ASP n 1 362 ALA n 1 363 ILE n 1 364 ASN n 1 365 SER n 1 366 GLY n 1 367 VAL n 1 368 ASP n 1 369 GLY n 1 370 GLY n 1 371 THR n 1 372 ILE n 1 373 THR n 1 374 ILE n 1 375 THR n 1 376 SER n 1 377 GLU n 1 378 PRO n 1 379 TYR n 1 380 GLU n 1 381 GLY n 1 382 THR n 1 383 ALA n 1 384 ILE n 1 385 GLU n 1 386 VAL n 1 387 THR n 1 388 THR n 1 389 VAL n 1 390 GLU n 1 391 SER n 1 392 GLU n 1 393 THR n 1 394 VAL n 1 395 SER n 1 396 VAL n 1 397 PRO n 1 398 ALA n 1 399 ALA n 1 400 ASP n 1 401 TRP n 1 402 THR n 1 403 ASP n 1 404 ASN n 1 405 GLY n 1 406 ASP n 1 407 GLY n 1 408 THR n 1 409 TRP n 1 410 SER n 1 411 TYR n 1 412 ASP n 1 413 ALA n 1 414 SER n 1 415 GLY n 1 416 ASP n 1 417 LEU n 1 418 GLU n 1 419 THR n 1 420 THR n 1 421 ILE n 1 422 THR n 1 423 ASN n 1 424 VAL n 1 425 ASP n 1 426 SER n 1 427 ALA n 1 428 ARG n 1 429 PHE n 1 430 VAL n 1 431 SER n 1 432 THR n 1 433 ALA n 1 434 THR n 1 435 GLU n 1 436 THR n 1 437 THR n 1 438 TYR n 1 439 ASP n 1 440 THR n 1 441 LEU n 1 442 GLN n 1 443 LEU n 1 444 LYS n 1 445 GLY n 1 446 ALA n 1 447 PHE n 1 448 THR n 1 449 VAL n 1 450 ASP n 1 451 LYS n 1 452 LEU n 1 453 VAL n 1 454 ASN n 1 455 LYS n 1 456 GLN n 1 457 SER n 1 458 GLY n 1 459 GLU n 1 460 GLU n 1 461 VAL n 1 462 SER n 1 463 SER n 1 464 THR n 1 465 SER n 1 466 PHE n 1 467 THR n 1 468 SER n 1 469 SER n 1 470 GLU n 1 471 PRO n 1 472 GLN n 1 473 THR n 1 474 ASP n 1 475 SER n 1 476 ASN n 1 477 TYR n 1 478 ILE n 1 479 THR n 1 480 GLN n 1 481 ASP n 1 482 GLU n 1 483 TRP n 1 484 ASP n 1 485 GLN n 1 486 LEU n 1 487 GLU n 1 488 GLN n 1 489 GLN n 1 490 ASN n 1 491 LYS n 1 492 GLU n 1 493 LEU n 1 494 ILE n 1 495 GLU n 1 496 LYS n 1 497 TYR n 1 498 GLU n 1 499 GLN n 1 500 SER n 1 501 GLN n 1 502 SER n 1 503 GLY n 1 504 GLY n 1 505 GLY n 1 506 LEU n 1 507 ASP n 1 508 LEU n 1 509 GLY n 1 510 GLY n 1 511 LEU n 1 512 ASP n 1 513 MET n 1 514 PHE n 1 515 GLY n 1 516 VAL n 1 517 PRO n 1 518 GLY n 1 519 GLU n 1 520 MET n 1 521 VAL n 1 522 ALA n 1 523 VAL n 1 524 GLY n 1 525 ALA n 1 526 ALA n 1 527 ALA n 1 528 VAL n 1 529 ILE n 1 530 GLY n 1 531 PHE n 1 532 LEU n 1 533 MET n 1 534 LEU n 1 535 GLY n 1 536 ASN n 1 537 ASN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 537 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Halorubrum pleomorphic virus 6' _entity_src_nat.pdbx_ncbi_taxonomy_id 1156721 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 PRO 3 3 ? ? ? A . n A 1 4 LEU 4 4 ? ? ? A . n A 1 5 VAL 5 5 ? ? ? A . n A 1 6 GLY 6 6 ? ? ? A . n A 1 7 TYR 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 ILE 9 9 9 ILE ALA A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 TRP 24 24 24 TRP TRP A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 MET 65 65 65 MET MET A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 HIS 77 77 77 HIS HIS A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 PHE 119 119 119 PHE PHE A . n A 1 120 TYR 120 120 120 TYR TYR A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 MET 133 133 133 MET MET A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 PHE 151 151 151 PHE PHE A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 ASN 166 166 166 ASN ASN A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 LYS 169 169 169 LYS LYS A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 MET 175 175 175 MET MET A . n A 1 176 PRO 176 176 176 PRO PRO A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 ASN 180 180 180 ASN ASN A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 THR 182 182 182 THR THR A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 THR 185 185 185 THR THR A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 ARG 187 187 187 ARG ARG A . n A 1 188 HIS 188 188 188 HIS HIS A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 TRP 192 192 192 TRP TRP A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 ASN 196 196 196 ASN ASN A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 TYR 199 199 199 TYR TYR A . n A 1 200 SER 200 200 200 SER SER A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 VAL 202 202 202 VAL VAL A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 TYR 204 204 204 TYR TYR A . n A 1 205 ASN 205 205 205 ASN ASN A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 THR 211 211 211 THR THR A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 THR 213 213 213 THR THR A . n A 1 214 ASN 214 214 214 ASN ASN A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 TYR 218 218 218 TYR TYR A . n A 1 219 ASN 219 219 219 ASN ASN A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 GLY 223 223 223 GLY GLY A . n A 1 224 THR 224 224 224 THR THR A . n A 1 225 GLN 225 225 225 GLN GLN A . n A 1 226 TYR 226 226 226 TYR TYR A . n A 1 227 MET 227 227 227 MET MET A . n A 1 228 LYS 228 228 228 LYS LYS A . n A 1 229 PHE 229 229 229 PHE PHE A . n A 1 230 SER 230 230 230 SER SER A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 TRP 232 232 232 TRP TRP A . n A 1 233 ASN 233 233 233 ASN ASN A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 VAL 235 235 235 VAL VAL A . n A 1 236 GLU 236 236 236 GLU GLU A . n A 1 237 THR 237 237 237 THR THR A . n A 1 238 GLU 238 238 238 GLU GLU A . n A 1 239 MET 239 239 239 MET MET A . n A 1 240 ASP 240 240 240 ASP ASP A . n A 1 241 THR 241 241 241 THR THR A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 PHE 243 243 243 PHE PHE A . n A 1 244 GLN 244 244 244 GLN GLN A . n A 1 245 ASN 245 245 245 ASN ASN A . n A 1 246 VAL 246 246 246 VAL VAL A . n A 1 247 ARG 247 247 247 ARG ARG A . n A 1 248 ASN 248 248 248 ASN ASN A . n A 1 249 GLY 249 249 249 GLY GLY A . n A 1 250 ILE 250 250 250 ILE ILE A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 THR 252 252 252 THR THR A . n A 1 253 TRP 253 253 253 TRP TRP A . n A 1 254 VAL 254 254 254 VAL VAL A . n A 1 255 THR 255 255 255 THR THR A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 VAL 257 257 257 VAL VAL A . n A 1 258 TYR 258 258 258 TYR TYR A . n A 1 259 GLY 259 259 259 GLY GLY A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 VAL 261 261 261 VAL VAL A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 SER 263 263 263 SER SER A . n A 1 264 GLY 264 264 264 GLY GLY A . n A 1 265 ALA 265 265 265 ALA ALA A . n A 1 266 ILE 266 266 266 ILE ILE A . n A 1 267 GLU 267 267 267 GLU GLU A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 SER 269 269 269 SER SER A . n A 1 270 ASP 270 270 270 ASP ASP A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 VAL 272 272 272 VAL VAL A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 PRO 274 274 274 PRO PRO A . n A 1 275 ARG 275 275 275 ARG ARG A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 ARG 277 277 277 ARG ARG A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 THR 279 279 279 THR THR A . n A 1 280 MET 280 280 280 MET MET A . n A 1 281 MET 281 281 281 MET MET A . n A 1 282 ALA 282 282 282 ALA ALA A . n A 1 283 GLN 283 283 283 GLN GLN A . n A 1 284 GLU 284 284 284 GLU GLU A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 GLY 286 286 286 GLY GLY A . n A 1 287 MET 287 287 287 MET MET A . n A 1 288 SER 288 288 288 SER SER A . n A 1 289 GLN 289 289 289 GLN GLN A . n A 1 290 ALA 290 290 290 ALA ALA A . n A 1 291 ILE 291 291 291 ILE ILE A . n A 1 292 ALA 292 292 292 ALA ALA A . n A 1 293 ASP 293 293 293 ASP ASP A . n A 1 294 LEU 294 294 294 LEU LEU A . n A 1 295 ILE 295 295 295 ILE ILE A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 ASN 298 298 298 ASN ASN A . n A 1 299 VAL 299 299 299 VAL VAL A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 VAL 301 301 301 VAL VAL A . n A 1 302 ASP 302 302 302 ASP ASP A . n A 1 303 ALA 303 303 303 ALA ALA A . n A 1 304 GLU 304 304 304 GLU GLU A . n A 1 305 ARG 305 305 305 ARG ARG A . n A 1 306 GLU 306 306 306 GLU GLU A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 THR 308 308 308 THR THR A . n A 1 309 ILE 309 309 309 ILE ILE A . n A 1 310 THR 310 310 310 THR THR A . n A 1 311 ILE 311 311 311 ILE ILE A . n A 1 312 GLN 312 312 312 GLN GLN A . n A 1 313 ASP 313 313 313 ASP ASP A . n A 1 314 THR 314 314 314 THR THR A . n A 1 315 GLY 315 315 315 GLY GLY A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 THR 317 317 317 THR THR A . n A 1 318 LEU 318 318 318 LEU LEU A . n A 1 319 PRO 319 319 319 PRO PRO A . n A 1 320 GLY 320 320 320 GLY GLY A . n A 1 321 THR 321 321 321 THR THR A . n A 1 322 PHE 322 322 322 PHE PHE A . n A 1 323 ALA 323 323 323 ALA ALA A . n A 1 324 LEU 324 324 324 LEU LEU A . n A 1 325 THR 325 325 325 THR THR A . n A 1 326 ASP 326 326 326 ASP ASP A . n A 1 327 SER 327 327 327 SER SER A . n A 1 328 SER 328 328 328 SER SER A . n A 1 329 ASP 329 329 329 ASP ASP A . n A 1 330 GLY 330 330 330 GLY GLY A . n A 1 331 PRO 331 331 331 PRO PRO A . n A 1 332 LEU 332 332 332 LEU LEU A . n A 1 333 SER 333 333 333 SER SER A . n A 1 334 ALA 334 334 334 ALA ALA A . n A 1 335 GLY 335 335 335 GLY GLY A . n A 1 336 GLN 336 336 336 GLN GLN A . n A 1 337 THR 337 337 337 THR THR A . n A 1 338 TYR 338 338 338 TYR TYR A . n A 1 339 ASP 339 339 339 ASP ASP A . n A 1 340 PRO 340 340 340 PRO PRO A . n A 1 341 SER 341 341 341 SER SER A . n A 1 342 THR 342 342 342 THR THR A . n A 1 343 PHE 343 343 343 PHE PHE A . n A 1 344 SER 344 344 344 SER SER A . n A 1 345 GLY 345 345 345 GLY GLY A . n A 1 346 ASP 346 346 346 ASP ASP A . n A 1 347 VAL 347 347 347 VAL VAL A . n A 1 348 TYR 348 348 348 TYR TYR A . n A 1 349 PHE 349 349 349 PHE PHE A . n A 1 350 THR 350 350 350 THR THR A . n A 1 351 ALA 351 351 351 ALA ALA A . n A 1 352 ASP 352 352 352 ASP ASP A . n A 1 353 MET 353 353 353 MET MET A . n A 1 354 SER 354 354 354 SER SER A . n A 1 355 LEU 355 355 355 LEU LEU A . n A 1 356 VAL 356 356 356 VAL VAL A . n A 1 357 GLU 357 357 357 GLU GLU A . n A 1 358 GLY 358 358 358 GLY GLY A . n A 1 359 PRO 359 359 359 PRO PRO A . n A 1 360 TRP 360 360 360 TRP TRP A . n A 1 361 ASP 361 361 361 ASP ASP A . n A 1 362 ALA 362 362 362 ALA ALA A . n A 1 363 ILE 363 363 363 ILE ILE A . n A 1 364 ASN 364 364 364 ASN ASN A . n A 1 365 SER 365 365 365 SER SER A . n A 1 366 GLY 366 366 366 GLY GLY A . n A 1 367 VAL 367 367 367 VAL VAL A . n A 1 368 ASP 368 368 368 ASP ASP A . n A 1 369 GLY 369 369 369 GLY GLY A . n A 1 370 GLY 370 370 370 GLY GLY A . n A 1 371 THR 371 371 371 THR THR A . n A 1 372 ILE 372 372 372 ILE ILE A . n A 1 373 THR 373 373 373 THR THR A . n A 1 374 ILE 374 374 374 ILE ILE A . n A 1 375 THR 375 375 375 THR THR A . n A 1 376 SER 376 376 376 SER SER A . n A 1 377 GLU 377 377 377 GLU GLU A . n A 1 378 PRO 378 378 378 PRO PRO A . n A 1 379 TYR 379 379 379 TYR TYR A . n A 1 380 GLU 380 380 380 GLU GLU A . n A 1 381 GLY 381 381 381 GLY GLY A . n A 1 382 THR 382 382 382 THR THR A . n A 1 383 ALA 383 383 383 ALA ALA A . n A 1 384 ILE 384 384 384 ILE ILE A . n A 1 385 GLU 385 385 385 GLU GLU A . n A 1 386 VAL 386 386 386 VAL VAL A . n A 1 387 THR 387 387 387 THR THR A . n A 1 388 THR 388 388 388 THR THR A . n A 1 389 VAL 389 389 389 VAL VAL A . n A 1 390 GLU 390 390 390 GLU GLU A . n A 1 391 SER 391 391 391 SER SER A . n A 1 392 GLU 392 392 392 GLU GLU A . n A 1 393 THR 393 393 393 THR THR A . n A 1 394 VAL 394 394 394 VAL VAL A . n A 1 395 SER 395 395 395 SER SER A . n A 1 396 VAL 396 396 396 VAL VAL A . n A 1 397 PRO 397 397 397 PRO PRO A . n A 1 398 ALA 398 398 398 ALA ALA A . n A 1 399 ALA 399 399 399 ALA ALA A . n A 1 400 ASP 400 400 400 ASP ASP A . n A 1 401 TRP 401 401 401 TRP TRP A . n A 1 402 THR 402 402 402 THR THR A . n A 1 403 ASP 403 403 403 ASP ASP A . n A 1 404 ASN 404 404 404 ASN ASN A . n A 1 405 GLY 405 405 405 GLY GLY A . n A 1 406 ASP 406 406 406 ASP ASP A . n A 1 407 GLY 407 407 407 GLY GLY A . n A 1 408 THR 408 408 408 THR THR A . n A 1 409 TRP 409 409 409 TRP TRP A . n A 1 410 SER 410 410 410 SER SER A . n A 1 411 TYR 411 411 411 TYR TYR A . n A 1 412 ASP 412 412 412 ASP ASP A . n A 1 413 ALA 413 413 413 ALA ALA A . n A 1 414 SER 414 414 414 SER SER A . n A 1 415 GLY 415 415 415 GLY GLY A . n A 1 416 ASP 416 416 416 ASP ASP A . n A 1 417 LEU 417 417 417 LEU LEU A . n A 1 418 GLU 418 418 418 GLU GLU A . n A 1 419 THR 419 419 419 THR THR A . n A 1 420 THR 420 420 420 THR THR A . n A 1 421 ILE 421 421 421 ILE ILE A . n A 1 422 THR 422 422 422 THR THR A . n A 1 423 ASN 423 423 423 ASN ASN A . n A 1 424 VAL 424 424 424 VAL VAL A . n A 1 425 ASP 425 425 425 ASP ASP A . n A 1 426 SER 426 426 426 SER SER A . n A 1 427 ALA 427 427 427 ALA ALA A . n A 1 428 ARG 428 428 428 ARG ARG A . n A 1 429 PHE 429 429 429 PHE PHE A . n A 1 430 VAL 430 430 430 VAL VAL A . n A 1 431 SER 431 431 431 SER SER A . n A 1 432 THR 432 432 432 THR THR A . n A 1 433 ALA 433 433 433 ALA ALA A . n A 1 434 THR 434 434 434 THR THR A . n A 1 435 GLU 435 435 435 GLU GLU A . n A 1 436 THR 436 436 436 THR THR A . n A 1 437 THR 437 437 437 THR THR A . n A 1 438 TYR 438 438 438 TYR TYR A . n A 1 439 ASP 439 439 439 ASP ASP A . n A 1 440 THR 440 440 440 THR THR A . n A 1 441 LEU 441 441 441 LEU LEU A . n A 1 442 GLN 442 442 442 GLN GLN A . n A 1 443 LEU 443 443 443 LEU LEU A . n A 1 444 LYS 444 444 444 LYS LYS A . n A 1 445 GLY 445 445 445 GLY GLY A . n A 1 446 ALA 446 446 446 ALA ALA A . n A 1 447 PHE 447 447 447 PHE PHE A . n A 1 448 THR 448 448 448 THR THR A . n A 1 449 VAL 449 449 449 VAL VAL A . n A 1 450 ASP 450 450 450 ASP ASP A . n A 1 451 LYS 451 451 451 LYS LYS A . n A 1 452 LEU 452 452 452 LEU LEU A . n A 1 453 VAL 453 453 453 VAL VAL A . n A 1 454 ASN 454 454 454 ASN ASN A . n A 1 455 LYS 455 455 455 LYS LYS A . n A 1 456 GLN 456 456 456 GLN GLN A . n A 1 457 SER 457 457 457 SER SER A . n A 1 458 GLY 458 458 458 GLY GLY A . n A 1 459 GLU 459 459 459 GLU GLU A . n A 1 460 GLU 460 460 460 GLU GLU A . n A 1 461 VAL 461 461 461 VAL VAL A . n A 1 462 SER 462 462 462 SER SER A . n A 1 463 SER 463 463 463 SER SER A . n A 1 464 THR 464 464 464 THR THR A . n A 1 465 SER 465 465 465 SER SER A . n A 1 466 PHE 466 466 466 PHE PHE A . n A 1 467 THR 467 467 467 THR THR A . n A 1 468 SER 468 468 468 SER SER A . n A 1 469 SER 469 469 469 SER SER A . n A 1 470 GLU 470 470 470 GLU GLU A . n A 1 471 PRO 471 471 471 PRO PRO A . n A 1 472 GLN 472 472 472 GLN GLN A . n A 1 473 THR 473 473 473 THR THR A . n A 1 474 ASP 474 474 474 ASP ASP A . n A 1 475 SER 475 475 475 SER SER A . n A 1 476 ASN 476 476 476 ASN ASN A . n A 1 477 TYR 477 477 477 TYR TYR A . n A 1 478 ILE 478 478 478 ILE ILE A . n A 1 479 THR 479 479 479 THR THR A . n A 1 480 GLN 480 480 480 GLN GLN A . n A 1 481 ASP 481 481 481 ASP ASP A . n A 1 482 GLU 482 482 482 GLU GLU A . n A 1 483 TRP 483 483 483 TRP TRP A . n A 1 484 ASP 484 484 484 ASP ASP A . n A 1 485 GLN 485 485 485 GLN GLN A . n A 1 486 LEU 486 486 486 LEU LEU A . n A 1 487 GLU 487 487 487 GLU GLU A . n A 1 488 GLN 488 488 488 GLN GLN A . n A 1 489 GLN 489 489 489 GLN GLN A . n A 1 490 ASN 490 490 490 ASN ASN A . n A 1 491 LYS 491 491 491 LYS LYS A . n A 1 492 GLU 492 492 492 GLU GLU A . n A 1 493 LEU 493 493 493 LEU LEU A . n A 1 494 ILE 494 494 494 ILE ILE A . n A 1 495 GLU 495 495 495 GLU GLU A . n A 1 496 LYS 496 496 496 LYS LYS A . n A 1 497 TYR 497 497 497 TYR TYR A . n A 1 498 GLU 498 498 498 GLU GLU A . n A 1 499 GLN 499 499 ? ? ? A . n A 1 500 SER 500 500 ? ? ? A . n A 1 501 GLN 501 501 ? ? ? A . n A 1 502 SER 502 502 ? ? ? A . n A 1 503 GLY 503 503 ? ? ? A . n A 1 504 GLY 504 504 ? ? ? A . n A 1 505 GLY 505 505 ? ? ? A . n A 1 506 LEU 506 506 ? ? ? A . n A 1 507 ASP 507 507 ? ? ? A . n A 1 508 LEU 508 508 ? ? ? A . n A 1 509 GLY 509 509 ? ? ? A . n A 1 510 GLY 510 510 ? ? ? A . n A 1 511 LEU 511 511 ? ? ? A . n A 1 512 ASP 512 512 ? ? ? A . n A 1 513 MET 513 513 ? ? ? A . n A 1 514 PHE 514 514 ? ? ? A . n A 1 515 GLY 515 515 ? ? ? A . n A 1 516 VAL 516 516 ? ? ? A . n A 1 517 PRO 517 517 ? ? ? A . n A 1 518 GLY 518 518 ? ? ? A . n A 1 519 GLU 519 519 ? ? ? A . n A 1 520 MET 520 520 ? ? ? A . n A 1 521 VAL 521 521 ? ? ? A . n A 1 522 ALA 522 522 ? ? ? A . n A 1 523 VAL 523 523 ? ? ? A . n A 1 524 GLY 524 524 ? ? ? A . n A 1 525 ALA 525 525 ? ? ? A . n A 1 526 ALA 526 526 ? ? ? A . n A 1 527 ALA 527 527 ? ? ? A . n A 1 528 VAL 528 528 ? ? ? A . n A 1 529 ILE 529 529 ? ? ? A . n A 1 530 GLY 530 530 ? ? ? A . n A 1 531 PHE 531 531 ? ? ? A . n A 1 532 LEU 532 532 ? ? ? A . n A 1 533 MET 533 533 ? ? ? A . n A 1 534 LEU 534 534 ? ? ? A . n A 1 535 GLY 535 535 ? ? ? A . n A 1 536 ASN 536 536 ? ? ? A . n A 1 537 ASN 537 537 ? ? ? A . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 9 ? CG1 ? A ILE 9 CG1 2 1 Y 1 A ILE 9 ? CG2 ? A ILE 9 CG2 3 1 Y 1 A ILE 9 ? CD1 ? A ILE 9 CD1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6J7V _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6J7V _struct.title 'Structure of HRPV6 VP5 fitted in the cryoEM density of the spike' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6J7V _struct_keywords.text 'HRPV6, spike, envelope protein, fusion protein, archaea, haloarchaea, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code H9ABP6_9VIRU _struct_ref.pdbx_db_accession H9ABP6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IAPLVGYAIGAAAISAVGGIGVGWTLREFEVVGSDDPAEGLTPDVLRNQLSDSVVKRKSNNQSTMVDNQNILDGVEHTAY TEAKIAAIEELNAGSSESAVLSAANSAIDSYETTVRTNFYKSWNETVRELEAMTQTVIAHADVGLSYITDFGDPRFGNLA SGTSPNTLKDTTVSMPDGTNFTLLTFRHNTGWDSGNAAYSVVEYNPKEVVTSTNSNTYNTVDGTQYMKFSEWNAVETEMD TVFQNVRNGISTWVTNVYGDVQSGAIEISDLVTPRERATMMAQEEGMSQAIADLIALNVPVDAEREATITIQDTGATLPG TFALTDSSDGPLSAGQTYDPSTFSGDVYFTADMSLVEGPWDAINSGVDGGTITITSEPYEGTAIEVTTVESETVSVPAAD WTDNGDGTWSYDASGDLETTITNVDSARFVSTATETTYDTLQLKGAFTVDKLVNKQSGEEVSSTSFTSSEPQTDSNYITQ DEWDQLEQQNKELIEKYEQSQSGGGLDLGGLDMFGVPGEMVAVGAAAVIGFLMLGNN ; _struct_ref.pdbx_align_begin 33 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6J7V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 537 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession H9ABP6 _struct_ref_seq.db_align_beg 33 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 569 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 537 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 22 ? LEU A 26 ? VAL A 22 LEU A 26 5 ? 5 HELX_P HELX_P2 AA2 THR A 42 ? MET A 65 ? THR A 42 MET A 65 1 ? 24 HELX_P HELX_P3 AA3 ASN A 68 ? ILE A 71 ? ASN A 68 ILE A 71 5 ? 4 HELX_P HELX_P4 AA4 LEU A 72 ? ALA A 93 ? LEU A 72 ALA A 93 1 ? 22 HELX_P HELX_P5 AA5 SER A 96 ? ALA A 141 ? SER A 96 ALA A 141 1 ? 46 HELX_P HELX_P6 AA6 GLY A 144 ? THR A 149 ? GLY A 144 THR A 149 1 ? 6 HELX_P HELX_P7 AA7 LYS A 228 ? TYR A 258 ? LYS A 228 TYR A 258 1 ? 31 HELX_P HELX_P8 AA8 THR A 273 ? GLU A 284 ? THR A 273 GLU A 284 1 ? 12 HELX_P HELX_P9 AA9 SER A 288 ? LEU A 297 ? SER A 288 LEU A 297 1 ? 10 HELX_P HELX_P10 AB1 ASP A 326 ? GLY A 330 ? ASP A 326 GLY A 330 5 ? 5 HELX_P HELX_P11 AB2 ALA A 399 ? TRP A 401 ? ALA A 399 TRP A 401 5 ? 3 HELX_P HELX_P12 AB3 THR A 479 ? TYR A 497 ? THR A 479 TYR A 497 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 12 A . ? ALA 12 A ALA 13 A ? ALA 13 A 1 1.57 2 ILE 20 A . ? ILE 20 A GLY 21 A ? GLY 21 A 1 -2.04 3 LYS 455 A . ? LYS 455 A GLN 456 A ? GLN 456 A 1 -1.67 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 6 ? AA4 ? 3 ? AA5 ? 4 ? AA6 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 166 ? SER A 174 ? ASN A 166 SER A 174 AA1 2 ASN A 180 ? ASN A 189 ? ASN A 180 ASN A 189 AA1 3 VAL A 201 ? TYR A 204 ? VAL A 201 TYR A 204 AA1 4 VAL A 209 ? THR A 213 ? VAL A 209 THR A 213 AA2 1 ASN A 219 ? VAL A 221 ? ASN A 219 VAL A 221 AA2 2 THR A 224 ? TYR A 226 ? THR A 224 TYR A 226 AA3 1 THR A 337 ? TYR A 338 ? THR A 337 TYR A 338 AA3 2 PHE A 447 ? ASN A 454 ? PHE A 447 ASN A 454 AA3 3 ARG A 305 ? ILE A 311 ? ARG A 305 ILE A 311 AA3 4 THR A 317 ? LEU A 324 ? THR A 317 LEU A 324 AA3 5 VAL A 347 ? ASP A 352 ? VAL A 347 ASP A 352 AA3 6 TYR A 438 ? LEU A 443 ? TYR A 438 LEU A 443 AA4 1 GLU A 357 ? PRO A 359 ? GLU A 357 PRO A 359 AA4 2 THR A 422 ? SER A 431 ? THR A 422 SER A 431 AA4 3 GLY A 366 ? VAL A 367 ? GLY A 366 VAL A 367 AA5 1 GLU A 357 ? PRO A 359 ? GLU A 357 PRO A 359 AA5 2 THR A 422 ? SER A 431 ? THR A 422 SER A 431 AA5 3 THR A 382 ? THR A 388 ? THR A 382 THR A 388 AA5 4 THR A 393 ? PRO A 397 ? THR A 393 PRO A 397 AA6 1 THR A 371 ? ILE A 374 ? THR A 371 ILE A 374 AA6 2 TRP A 409 ? ASP A 412 ? TRP A 409 ASP A 412 AA6 3 THR A 402 ? ASP A 403 ? THR A 402 ASP A 403 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 169 ? N LYS A 169 O THR A 185 ? O THR A 185 AA1 2 3 N HIS A 188 ? N HIS A 188 O VAL A 202 ? O VAL A 202 AA1 3 4 N VAL A 201 ? N VAL A 201 O THR A 213 ? O THR A 213 AA2 1 2 N ASN A 219 ? N ASN A 219 O TYR A 226 ? O TYR A 226 AA3 1 2 N TYR A 338 ? N TYR A 338 O PHE A 447 ? O PHE A 447 AA3 2 3 O VAL A 453 ? O VAL A 453 N GLU A 306 ? N GLU A 306 AA3 3 4 N ALA A 307 ? N ALA A 307 O GLY A 320 ? O GLY A 320 AA3 4 5 N ALA A 323 ? N ALA A 323 O TYR A 348 ? O TYR A 348 AA3 5 6 N PHE A 349 ? N PHE A 349 O LEU A 441 ? O LEU A 441 AA4 1 2 N GLY A 358 ? N GLY A 358 O PHE A 429 ? O PHE A 429 AA4 2 3 O THR A 422 ? O THR A 422 N VAL A 367 ? N VAL A 367 AA5 1 2 N GLY A 358 ? N GLY A 358 O PHE A 429 ? O PHE A 429 AA5 2 3 O ARG A 428 ? O ARG A 428 N GLU A 385 ? N GLU A 385 AA5 3 4 N ILE A 384 ? N ILE A 384 O VAL A 396 ? O VAL A 396 AA6 1 2 N ILE A 374 ? N ILE A 374 O TRP A 409 ? O TRP A 409 AA6 2 3 O SER A 410 ? O SER A 410 N THR A 402 ? N THR A 402 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 15 ? ? -39.73 -28.41 2 1 THR A 64 ? ? -110.47 -79.47 3 1 ASN A 68 ? ? -108.29 47.34 4 1 THR A 217 ? ? -92.70 43.26 5 1 THR A 422 ? ? -152.81 -158.37 # _em_3d_fitting.entry_id 6J7V _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'RIGID BODY FIT' _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria 'cross correlation' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id A _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 6QGL _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 6QGL # _em_3d_reconstruction.entry_id 6J7V _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 6057 _em_3d_reconstruction.resolution 16 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.2 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name Halorubrum _em_entity_assembly.source NATURAL _em_entity_assembly.type VIRUS _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 6J7V _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.details ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty NO _em_virus_entity.enveloped YES _em_virus_entity.virus_isolate SPECIES _em_virus_entity.virus_type VIRION _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 6J7V _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6J7V _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SUBTOMOGRAM AVERAGING' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 6J7V _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 1 ? A ILE 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A PRO 3 ? A PRO 3 4 1 Y 1 A LEU 4 ? A LEU 4 5 1 Y 1 A VAL 5 ? A VAL 5 6 1 Y 1 A GLY 6 ? A GLY 6 7 1 Y 1 A TYR 7 ? A TYR 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A GLN 499 ? A GLN 499 10 1 Y 1 A SER 500 ? A SER 500 11 1 Y 1 A GLN 501 ? A GLN 501 12 1 Y 1 A SER 502 ? A SER 502 13 1 Y 1 A GLY 503 ? A GLY 503 14 1 Y 1 A GLY 504 ? A GLY 504 15 1 Y 1 A GLY 505 ? A GLY 505 16 1 Y 1 A LEU 506 ? A LEU 506 17 1 Y 1 A ASP 507 ? A ASP 507 18 1 Y 1 A LEU 508 ? A LEU 508 19 1 Y 1 A GLY 509 ? A GLY 509 20 1 Y 1 A GLY 510 ? A GLY 510 21 1 Y 1 A LEU 511 ? A LEU 511 22 1 Y 1 A ASP 512 ? A ASP 512 23 1 Y 1 A MET 513 ? A MET 513 24 1 Y 1 A PHE 514 ? A PHE 514 25 1 Y 1 A GLY 515 ? A GLY 515 26 1 Y 1 A VAL 516 ? A VAL 516 27 1 Y 1 A PRO 517 ? A PRO 517 28 1 Y 1 A GLY 518 ? A GLY 518 29 1 Y 1 A GLU 519 ? A GLU 519 30 1 Y 1 A MET 520 ? A MET 520 31 1 Y 1 A VAL 521 ? A VAL 521 32 1 Y 1 A ALA 522 ? A ALA 522 33 1 Y 1 A VAL 523 ? A VAL 523 34 1 Y 1 A GLY 524 ? A GLY 524 35 1 Y 1 A ALA 525 ? A ALA 525 36 1 Y 1 A ALA 526 ? A ALA 526 37 1 Y 1 A ALA 527 ? A ALA 527 38 1 Y 1 A VAL 528 ? A VAL 528 39 1 Y 1 A ILE 529 ? A ILE 529 40 1 Y 1 A GLY 530 ? A GLY 530 41 1 Y 1 A PHE 531 ? A PHE 531 42 1 Y 1 A LEU 532 ? A LEU 532 43 1 Y 1 A MET 533 ? A MET 533 44 1 Y 1 A LEU 534 ? A LEU 534 45 1 Y 1 A GLY 535 ? A GLY 535 46 1 Y 1 A ASN 536 ? A ASN 536 47 1 Y 1 A ASN 537 ? A ASN 537 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TRP N N N N 304 TRP CA C N S 305 TRP C C N N 306 TRP O O N N 307 TRP CB C N N 308 TRP CG C Y N 309 TRP CD1 C Y N 310 TRP CD2 C Y N 311 TRP NE1 N Y N 312 TRP CE2 C Y N 313 TRP CE3 C Y N 314 TRP CZ2 C Y N 315 TRP CZ3 C Y N 316 TRP CH2 C Y N 317 TRP OXT O N N 318 TRP H H N N 319 TRP H2 H N N 320 TRP HA H N N 321 TRP HB2 H N N 322 TRP HB3 H N N 323 TRP HD1 H N N 324 TRP HE1 H N N 325 TRP HE3 H N N 326 TRP HZ2 H N N 327 TRP HZ3 H N N 328 TRP HH2 H N N 329 TRP HXT H N N 330 TYR N N N N 331 TYR CA C N S 332 TYR C C N N 333 TYR O O N N 334 TYR CB C N N 335 TYR CG C Y N 336 TYR CD1 C Y N 337 TYR CD2 C Y N 338 TYR CE1 C Y N 339 TYR CE2 C Y N 340 TYR CZ C Y N 341 TYR OH O N N 342 TYR OXT O N N 343 TYR H H N N 344 TYR H2 H N N 345 TYR HA H N N 346 TYR HB2 H N N 347 TYR HB3 H N N 348 TYR HD1 H N N 349 TYR HD2 H N N 350 TYR HE1 H N N 351 TYR HE2 H N N 352 TYR HH H N N 353 TYR HXT H N N 354 VAL N N N N 355 VAL CA C N S 356 VAL C C N N 357 VAL O O N N 358 VAL CB C N N 359 VAL CG1 C N N 360 VAL CG2 C N N 361 VAL OXT O N N 362 VAL H H N N 363 VAL H2 H N N 364 VAL HA H N N 365 VAL HB H N N 366 VAL HG11 H N N 367 VAL HG12 H N N 368 VAL HG13 H N N 369 VAL HG21 H N N 370 VAL HG22 H N N 371 VAL HG23 H N N 372 VAL HXT H N N 373 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # _em_buffer_component.buffer_id 1 _em_buffer_component.id 1 _em_buffer_component.concentration 1.6 _em_buffer_component.concentration_units M _em_buffer_component.formula NaCl _em_buffer_component.name 'sodium chloride' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.057 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 56688 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism Halorubrum _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 1.6 _em_image_recording.average_exposure_time 1.6 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 QUANTUM (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name 'GIF Quantum LS' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.phase_plate 'VOLTA PHASE PLATE' _em_imaging_optics.sph_aberration_corrector ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'VOLUME SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? 'UCSF Chimera' ? ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 10 'FINAL EULER ASSIGNMENT' ? Dynamo ? 1 ? ? 11 CLASSIFICATION ? ? ? 1 ? ? 12 RECONSTRUCTION ? Dynamo ? 1 ? ? 13 'MODEL REFINEMENT' ? ? ? ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.id 1 _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.ncbi_tax_id 56688 _em_virus_natural_host.organism Halorubrum _em_virus_natural_host.strain ? # _em_virus_shell.id 1 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.diameter ? _em_virus_shell.name Envelope _em_virus_shell.triangulation ? # _em_volume_selection.id 1 _em_volume_selection.details ? _em_volume_selection.image_processing_id 1 _em_volume_selection.method ? _em_volume_selection.num_tomograms 10 _em_volume_selection.num_volumes_extracted 8953 _em_volume_selection.reference_model ? # _pdbx_audit_support.funding_organization 'European Research Council' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number 649053 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6QGL # _atom_sites.entry_id 6J7V _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_