HEADER OXIDOREDUCTASE 18-JAN-19 6J87 TITLE CRYSTAL STRUCTURE OF HIND WITH NMFT AND NO COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOCARDICIN N-OXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOALLOTEICHUS HINDUSTANUS; SOURCE 3 ORGANISM_TAXID: 2017; SOURCE 4 GENE: SAMN05444320_102263; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS P450, INDOLACTAM, OXIDATION, NMFT, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.FEI,T.MORI,I.ABE REVDAT 3 22-NOV-23 6J87 1 REMARK REVDAT 2 17-FEB-21 6J87 1 JRNL REVDAT 1 07-AUG-19 6J87 0 JRNL AUTH F.HE,T.MORI,I.MORITA,H.NAKAMURA,M.ALBLOVA,S.HOSHINO, JRNL AUTH 2 T.AWAKAWA,I.ABE JRNL TITL MOLECULAR BASIS FOR THE P450-CATALYZED C-N BOND FORMATION IN JRNL TITL 2 INDOLACTAM BIOSYNTHESIS. JRNL REF NAT.CHEM.BIOL. V. 15 1206 2019 JRNL REFN ESSN 1552-4469 JRNL PMID 31636430 JRNL DOI 10.1038/S41589-019-0380-9 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 33139 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.180 REMARK 3 FREE R VALUE TEST SET COUNT : 2049 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.4126 - 5.5422 0.94 2295 145 0.1840 0.2569 REMARK 3 2 5.5422 - 4.4003 0.93 2259 147 0.1402 0.1960 REMARK 3 3 4.4003 - 3.8444 0.93 2242 143 0.1283 0.2342 REMARK 3 4 3.8444 - 3.4931 0.90 2186 139 0.1492 0.2306 REMARK 3 5 3.4931 - 3.2428 0.88 2135 142 0.1688 0.2347 REMARK 3 6 3.2428 - 3.0516 0.92 2221 144 0.1875 0.3010 REMARK 3 7 3.0516 - 2.8988 0.92 2215 138 0.2002 0.3578 REMARK 3 8 2.8988 - 2.7727 0.92 2244 143 0.2252 0.3472 REMARK 3 9 2.7727 - 2.6660 0.92 2226 143 0.2439 0.3864 REMARK 3 10 2.6660 - 2.5740 0.92 2189 142 0.2605 0.3724 REMARK 3 11 2.5740 - 2.4935 0.92 2229 141 0.2763 0.4160 REMARK 3 12 2.4935 - 2.4222 0.92 2225 145 0.2862 0.4368 REMARK 3 13 2.4222 - 2.3585 0.92 2162 136 0.2933 0.3817 REMARK 3 14 2.3585 - 2.3009 0.92 2287 151 0.2980 0.3906 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6508 REMARK 3 ANGLE : 1.116 8908 REMARK 3 CHIRALITY : 0.051 1004 REMARK 3 PLANARITY : 0.007 1156 REMARK 3 DIHEDRAL : 18.898 2422 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6J87 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JAN-19. REMARK 100 THE DEPOSITION ID IS D_1300010623. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33169 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.472 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.54900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6J82 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES (PH 6.5) CONTAINING 1200 MM REMARK 280 (NH4)2HPO4 AND 100 MM NACL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 77.51450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 399 REMARK 465 GLY A 400 REMARK 465 GLY A 401 REMARK 465 GLU A 402 REMARK 465 ARG A 403 REMARK 465 ALA A 404 REMARK 465 ALA A 405 REMARK 465 ALA A 406 REMARK 465 ALA A 407 REMARK 465 VAL A 408 REMARK 465 GLY A 409 REMARK 465 ALA A 410 REMARK 465 ASP A 411 REMARK 465 ARG A 412 REMARK 465 GLY A 413 REMARK 465 ALA A 414 REMARK 465 GLY A 415 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLY B 3 REMARK 465 GLY B 399 REMARK 465 GLY B 400 REMARK 465 GLY B 401 REMARK 465 GLU B 402 REMARK 465 ARG B 403 REMARK 465 ALA B 404 REMARK 465 ALA B 405 REMARK 465 ALA B 406 REMARK 465 ALA B 407 REMARK 465 VAL B 408 REMARK 465 GLY B 409 REMARK 465 ALA B 410 REMARK 465 ASP B 411 REMARK 465 ARG B 412 REMARK 465 GLY B 413 REMARK 465 ALA B 414 REMARK 465 GLY B 415 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 693 O HOH A 717 2.11 REMARK 500 O HOH B 703 O HOH B 716 2.12 REMARK 500 O HOH A 686 O HOH A 701 2.13 REMARK 500 O GLY A 69 O HOH A 601 2.14 REMARK 500 O HOH B 688 O HOH B 715 2.15 REMARK 500 O HOH B 707 O HOH B 713 2.16 REMARK 500 O HOH A 688 O HOH A 700 2.17 REMARK 500 O ALA B 15 NH2 ARG B 384 2.19 REMARK 500 OD2 ASP A 124 O HOH A 602 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 716 O HOH B 604 1556 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 17 -118.62 43.10 REMARK 500 THR A 58 -19.25 -140.23 REMARK 500 GLU A 72 118.94 -32.77 REMARK 500 SER A 83 -117.69 52.41 REMARK 500 PHE A 139 -62.12 -145.03 REMARK 500 GLU A 204 53.65 -90.38 REMARK 500 HIS A 238 -47.07 -132.91 REMARK 500 GLN A 254 65.65 -105.43 REMARK 500 HIS A 284 -76.01 -145.31 REMARK 500 LEU A 330 -0.16 -57.40 REMARK 500 PRO A 336 48.88 -84.44 REMARK 500 ARG B 17 -122.32 46.89 REMARK 500 THR B 58 1.43 -150.99 REMARK 500 SER B 83 -123.90 52.62 REMARK 500 PHE B 139 -54.77 -151.63 REMARK 500 ILE B 172 -68.35 -100.27 REMARK 500 GLU B 204 60.46 -101.44 REMARK 500 GLN B 254 64.28 -116.36 REMARK 500 HIS B 284 -80.82 -144.85 REMARK 500 GLU B 324 75.59 37.81 REMARK 500 LEU B 330 -7.81 -58.22 REMARK 500 CYS B 347 153.27 -46.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 NO A 502 N REMARK 620 2 HEM A 501 NA 96.6 REMARK 620 3 HEM A 501 NB 94.7 93.4 REMARK 620 4 HEM A 501 NC 94.5 168.9 85.9 REMARK 620 5 HEM A 501 ND 98.9 81.3 165.9 96.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 NO B 502 N REMARK 620 2 HEM B 501 NA 95.0 REMARK 620 3 HEM B 501 NB 89.7 90.9 REMARK 620 4 HEM B 501 NC 101.1 163.4 85.3 REMARK 620 5 HEM B 501 ND 109.5 87.1 160.8 91.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue B9L A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue B9L B 503 DBREF1 6J87 A 1 415 UNP A0A1M4Y7D5_STRHI DBREF2 6J87 A A0A1M4Y7D5 1 415 DBREF1 6J87 B 1 415 UNP A0A1M4Y7D5_STRHI DBREF2 6J87 B A0A1M4Y7D5 1 415 SEQADV 6J87 MET A -19 UNP A0A1M4Y7D INITIATING METHIONINE SEQADV 6J87 GLY A -18 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER A -17 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER A -16 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS A -15 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS A -14 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS A -13 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS A -12 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS A -11 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS A -10 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER A -9 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER A -8 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 GLY A -7 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 LEU A -6 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 VAL A -5 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 PRO A -4 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 ARG A -3 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 GLY A -2 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER A -1 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS A 0 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 MET B -19 UNP A0A1M4Y7D INITIATING METHIONINE SEQADV 6J87 GLY B -18 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER B -17 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER B -16 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS B -15 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS B -14 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS B -13 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS B -12 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS B -11 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS B -10 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER B -9 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER B -8 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 GLY B -7 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 LEU B -6 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 VAL B -5 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 PRO B -4 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 ARG B -3 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 GLY B -2 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 SER B -1 UNP A0A1M4Y7D EXPRESSION TAG SEQADV 6J87 HIS B 0 UNP A0A1M4Y7D EXPRESSION TAG SEQRES 1 A 435 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 435 LEU VAL PRO ARG GLY SER HIS MET THR GLY THR PRO ALA SEQRES 3 A 435 PRO VAL ARG TYR PRO PHE GLY GLU ALA VAL ARG LEU ASP SEQRES 4 A 435 LEU HIS PRO THR TYR ALA GLU LEU ARG GLU ARG ARG THR SEQRES 5 A 435 LEU LEU ARG VAL ARG VAL PRO HIS GLY ASP ASP ALA TRP SEQRES 6 A 435 LEU VAL THR ARG HIS GLU ASP VAL ARG THR VAL LEU THR SEQRES 7 A 435 ASP PRO ARG PHE SER ARG ALA ALA ALA ALA GLY ARG ASP SEQRES 8 A 435 GLU ALA ARG LEU THR PRO LEU VAL ILE ARG THR SER VAL SEQRES 9 A 435 MET GLY VAL ASP PRO PRO ASP HIS THR ARG LEU ARG ARG SEQRES 10 A 435 LEU VAL ALA THR ALA PHE SER ARG ARG GLY VAL GLU HIS SEQRES 11 A 435 LEU ARG PRO GLY ILE THR ALA LEU VAL ARG ARG LEU THR SEQRES 12 A 435 ASP ASP MET VAL GLY GLN GLY PRO PRO VAL ASP LEU VAL SEQRES 13 A 435 ARG SER PHE VAL THR PRO LEU SER GLY LEU VAL ILE CYS SEQRES 14 A 435 ASP LEU LEU GLY VAL PRO TYR ALA ASP ARG SER ARG PHE SEQRES 15 A 435 ARG HIS TRP LEU GLU ALA PHE PHE SER ILE THR ALA LEU SEQRES 16 A 435 PRO ALA ASP GLU VAL ALA VAL ARG ILE GLU ALA MET TYR SEQRES 17 A 435 GLY TYR ILE ALA GLU LEU VAL ALA LEU ARG ARG ALA GLU SEQRES 18 A 435 PRO THR GLU ASP LEU LEU GLY GLY LEU VAL ARG ALA ARG SEQRES 19 A 435 ASP ARG ASP GLY SER CYS SER GLU GLU GLU LEU VAL ASP SEQRES 20 A 435 LEU ALA ASN VAL LEU LEU LEU ALA GLY TYR HIS THR THR SEQRES 21 A 435 ALA SER GLN LEU ALA SER SER LEU PHE VAL LEU LEU THR SEQRES 22 A 435 GLN PRO GLU HIS ALA GLU LEU LEU ARG SER ARG PRO GLU SEQRES 23 A 435 LEU ALA PRO ARG ALA VAL GLU GLU LEU LEU ARG TYR VAL SEQRES 24 A 435 PRO LEU ILE ALA HIS VAL THR PHE ALA ARG TYR ALA THR SEQRES 25 A 435 GLU ASP VAL TRP LEU GLY GLY THR LEU VAL ARG ALA GLY SEQRES 26 A 435 GLU ALA VAL LEU PRO ALA VAL PRO SER ALA ASN ARG ASP SEQRES 27 A 435 ALA GLU VAL PHE ASP GLU PRO ASP ARG LEU ASP LEU THR SEQRES 28 A 435 ARG ARG HIS ASN PRO HIS LEU ALA PHE GLY HIS GLY LEU SEQRES 29 A 435 HIS HIS CYS LEU GLY ALA SER LEU VAL ARG VAL GLN MET SEQRES 30 A 435 GLU VAL ALA LEU THR MET LEU LEU GLY ARG PHE PRO ASP SEQRES 31 A 435 LEU ALA LEU ALA ALA PRO PRO ASP GLU VAL PRO TRP THR SEQRES 32 A 435 ARG GLY MET GLN ALA ARG SER PRO LEU ARG LEU PRO VAL SEQRES 33 A 435 THR TRP GLY GLY GLY GLU ARG ALA ALA ALA ALA VAL GLY SEQRES 34 A 435 ALA ASP ARG GLY ALA GLY SEQRES 1 B 435 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 435 LEU VAL PRO ARG GLY SER HIS MET THR GLY THR PRO ALA SEQRES 3 B 435 PRO VAL ARG TYR PRO PHE GLY GLU ALA VAL ARG LEU ASP SEQRES 4 B 435 LEU HIS PRO THR TYR ALA GLU LEU ARG GLU ARG ARG THR SEQRES 5 B 435 LEU LEU ARG VAL ARG VAL PRO HIS GLY ASP ASP ALA TRP SEQRES 6 B 435 LEU VAL THR ARG HIS GLU ASP VAL ARG THR VAL LEU THR SEQRES 7 B 435 ASP PRO ARG PHE SER ARG ALA ALA ALA ALA GLY ARG ASP SEQRES 8 B 435 GLU ALA ARG LEU THR PRO LEU VAL ILE ARG THR SER VAL SEQRES 9 B 435 MET GLY VAL ASP PRO PRO ASP HIS THR ARG LEU ARG ARG SEQRES 10 B 435 LEU VAL ALA THR ALA PHE SER ARG ARG GLY VAL GLU HIS SEQRES 11 B 435 LEU ARG PRO GLY ILE THR ALA LEU VAL ARG ARG LEU THR SEQRES 12 B 435 ASP ASP MET VAL GLY GLN GLY PRO PRO VAL ASP LEU VAL SEQRES 13 B 435 ARG SER PHE VAL THR PRO LEU SER GLY LEU VAL ILE CYS SEQRES 14 B 435 ASP LEU LEU GLY VAL PRO TYR ALA ASP ARG SER ARG PHE SEQRES 15 B 435 ARG HIS TRP LEU GLU ALA PHE PHE SER ILE THR ALA LEU SEQRES 16 B 435 PRO ALA ASP GLU VAL ALA VAL ARG ILE GLU ALA MET TYR SEQRES 17 B 435 GLY TYR ILE ALA GLU LEU VAL ALA LEU ARG ARG ALA GLU SEQRES 18 B 435 PRO THR GLU ASP LEU LEU GLY GLY LEU VAL ARG ALA ARG SEQRES 19 B 435 ASP ARG ASP GLY SER CYS SER GLU GLU GLU LEU VAL ASP SEQRES 20 B 435 LEU ALA ASN VAL LEU LEU LEU ALA GLY TYR HIS THR THR SEQRES 21 B 435 ALA SER GLN LEU ALA SER SER LEU PHE VAL LEU LEU THR SEQRES 22 B 435 GLN PRO GLU HIS ALA GLU LEU LEU ARG SER ARG PRO GLU SEQRES 23 B 435 LEU ALA PRO ARG ALA VAL GLU GLU LEU LEU ARG TYR VAL SEQRES 24 B 435 PRO LEU ILE ALA HIS VAL THR PHE ALA ARG TYR ALA THR SEQRES 25 B 435 GLU ASP VAL TRP LEU GLY GLY THR LEU VAL ARG ALA GLY SEQRES 26 B 435 GLU ALA VAL LEU PRO ALA VAL PRO SER ALA ASN ARG ASP SEQRES 27 B 435 ALA GLU VAL PHE ASP GLU PRO ASP ARG LEU ASP LEU THR SEQRES 28 B 435 ARG ARG HIS ASN PRO HIS LEU ALA PHE GLY HIS GLY LEU SEQRES 29 B 435 HIS HIS CYS LEU GLY ALA SER LEU VAL ARG VAL GLN MET SEQRES 30 B 435 GLU VAL ALA LEU THR MET LEU LEU GLY ARG PHE PRO ASP SEQRES 31 B 435 LEU ALA LEU ALA ALA PRO PRO ASP GLU VAL PRO TRP THR SEQRES 32 B 435 ARG GLY MET GLN ALA ARG SER PRO LEU ARG LEU PRO VAL SEQRES 33 B 435 THR TRP GLY GLY GLY GLU ARG ALA ALA ALA ALA VAL GLY SEQRES 34 B 435 ALA ASP ARG GLY ALA GLY HET HEM A 501 43 HET NO A 502 2 HET B9L A 503 26 HET HEM B 501 43 HET NO B 502 2 HET B9L B 503 26 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM NO NITRIC OXIDE HETNAM B9L N-[(2S)-1-HYDROXY-3-(1H-INDOL-3-YL)PROPAN-2-YL]-NALPHA- HETNAM 2 B9L METHYL-L-PHENYLALANINAMIDE HETSYN HEM HEME HETSYN NO NITROGEN MONOXIDE FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 NO 2(N O) FORMUL 5 B9L 2(C21 H25 N3 O2) FORMUL 9 HOH *252(H2 O) HELIX 1 AA1 PRO A 22 ARG A 31 1 10 HELIX 2 AA2 ARG A 49 ASP A 59 1 11 HELIX 3 AA3 ARG A 64 ALA A 68 5 5 HELIX 4 AA4 THR A 82 VAL A 87 5 6 HELIX 5 AA5 PRO A 90 ARG A 97 1 8 HELIX 6 AA6 VAL A 99 SER A 104 1 6 HELIX 7 AA7 SER A 104 HIS A 110 1 7 HELIX 8 AA8 LEU A 111 GLY A 130 1 20 HELIX 9 AA9 LEU A 135 PHE A 139 1 5 HELIX 10 AB1 PHE A 139 GLY A 153 1 15 HELIX 11 AB2 PRO A 155 ALA A 157 5 3 HELIX 12 AB3 ASP A 158 SER A 171 1 14 HELIX 13 AB4 PRO A 176 ALA A 200 1 25 HELIX 14 AB5 ASP A 205 GLY A 218 1 14 HELIX 15 AB6 SER A 221 HIS A 238 1 18 HELIX 16 AB7 HIS A 238 GLN A 254 1 17 HELIX 17 AB8 GLN A 254 ARG A 264 1 11 HELIX 18 AB9 LEU A 267 VAL A 279 1 13 HELIX 19 AC1 ALA A 311 ASN A 316 1 6 HELIX 20 AC2 HIS A 342 HIS A 346 5 5 HELIX 21 AC3 GLY A 349 PHE A 368 1 20 HELIX 22 AC4 PRO A 376 VAL A 380 5 5 HELIX 23 AC5 PRO B 22 ARG B 31 1 10 HELIX 24 AC6 ARG B 49 ASP B 59 1 11 HELIX 25 AC7 ALA B 65 ARG B 70 5 6 HELIX 26 AC8 THR B 82 VAL B 87 5 6 HELIX 27 AC9 PRO B 90 ARG B 97 1 8 HELIX 28 AD1 VAL B 99 SER B 104 1 6 HELIX 29 AD2 SER B 104 HIS B 110 1 7 HELIX 30 AD3 LEU B 111 GLY B 130 1 20 HELIX 31 AD4 LEU B 135 PHE B 139 1 5 HELIX 32 AD5 PHE B 139 GLY B 153 1 15 HELIX 33 AD6 PRO B 155 ALA B 157 5 3 HELIX 34 AD7 ASP B 158 SER B 171 1 14 HELIX 35 AD8 PRO B 176 GLU B 201 1 26 HELIX 36 AD9 ASP B 205 GLY B 218 1 14 HELIX 37 AE1 SER B 221 HIS B 238 1 18 HELIX 38 AE2 HIS B 238 GLN B 254 1 17 HELIX 39 AE3 GLN B 254 ARG B 264 1 11 HELIX 40 AE4 LEU B 267 VAL B 279 1 13 HELIX 41 AE5 ALA B 311 ASN B 316 1 6 HELIX 42 AE6 HIS B 342 HIS B 346 5 5 HELIX 43 AE7 GLY B 349 PHE B 368 1 20 HELIX 44 AE8 PRO B 376 VAL B 380 5 5 SHEET 1 AA1 6 VAL A 8 ARG A 9 0 SHEET 2 AA1 6 LEU A 34 ARG A 37 1 O ARG A 37 N VAL A 8 SHEET 3 AA1 6 ALA A 44 VAL A 47 -1 O LEU A 46 N LEU A 34 SHEET 4 AA1 6 ALA A 307 PRO A 310 1 O LEU A 309 N TRP A 45 SHEET 5 AA1 6 ARG A 289 ALA A 291 -1 N ARG A 289 O VAL A 308 SHEET 6 AA1 6 PHE A 62 SER A 63 -1 N SER A 63 O TYR A 290 SHEET 1 AA2 3 VAL A 133 ASP A 134 0 SHEET 2 AA2 3 PRO A 395 THR A 397 -1 O VAL A 396 N VAL A 133 SHEET 3 AA2 3 ALA A 372 LEU A 373 -1 N ALA A 372 O THR A 397 SHEET 1 AA3 2 VAL A 295 LEU A 297 0 SHEET 2 AA3 2 THR A 300 VAL A 302 -1 O VAL A 302 N VAL A 295 SHEET 1 AA4 6 VAL B 8 ARG B 9 0 SHEET 2 AA4 6 LEU B 34 ARG B 37 1 O ARG B 37 N VAL B 8 SHEET 3 AA4 6 ALA B 44 VAL B 47 -1 O ALA B 44 N VAL B 36 SHEET 4 AA4 6 ALA B 307 PRO B 310 1 O LEU B 309 N VAL B 47 SHEET 5 AA4 6 ARG B 289 ALA B 291 -1 N ARG B 289 O VAL B 308 SHEET 6 AA4 6 PHE B 62 SER B 63 -1 N SER B 63 O TYR B 290 SHEET 1 AA5 3 VAL B 133 ASP B 134 0 SHEET 2 AA5 3 PRO B 395 THR B 397 -1 O VAL B 396 N VAL B 133 SHEET 3 AA5 3 ALA B 372 LEU B 373 -1 N ALA B 372 O THR B 397 SHEET 1 AA6 2 VAL B 295 LEU B 297 0 SHEET 2 AA6 2 THR B 300 VAL B 302 -1 O VAL B 302 N VAL B 295 LINK FE HEM A 501 N NO A 502 1555 1555 1.92 LINK FE HEM B 501 N NO B 502 1555 1555 1.83 CISPEP 1 TYR A 10 PRO A 11 0 1.68 CISPEP 2 PRO A 89 PRO A 90 0 -3.00 CISPEP 3 PRO A 131 PRO A 132 0 -2.21 CISPEP 4 TYR B 10 PRO B 11 0 -3.03 CISPEP 5 PRO B 89 PRO B 90 0 4.81 CISPEP 6 PRO B 131 PRO B 132 0 -1.25 SITE 1 AC1 26 LEU A 57 VAL A 84 MET A 85 HIS A 92 SITE 2 AC1 26 ARG A 96 PHE A 103 ILE A 148 LEU A 232 SITE 3 AC1 26 ALA A 235 GLY A 236 THR A 239 THR A 240 SITE 4 AC1 26 GLN A 243 THR A 286 ARG A 289 ALA A 339 SITE 5 AC1 26 PHE A 340 GLY A 341 LEU A 344 HIS A 345 SITE 6 AC1 26 CYS A 347 LEU A 348 GLY A 349 VAL A 353 SITE 7 AC1 26 NO A 502 HOH A 636 SITE 1 AC2 4 ALA A 235 THR A 239 HEM A 501 B9L A 503 SITE 1 AC3 9 MET A 85 PHE A 169 PHE A 170 VAL A 231 SITE 2 AC3 9 VAL A 285 THR A 286 PHE A 287 GLN A 387 SITE 3 AC3 9 NO A 502 SITE 1 AC4 22 VAL B 84 MET B 85 HIS B 92 ARG B 96 SITE 2 AC4 22 ILE B 148 LEU B 232 ALA B 235 GLY B 236 SITE 3 AC4 22 THR B 239 THR B 240 GLN B 243 THR B 286 SITE 4 AC4 22 ARG B 289 ALA B 339 GLY B 341 HIS B 345 SITE 5 AC4 22 CYS B 347 LEU B 348 VAL B 353 NO B 502 SITE 6 AC4 22 B9L B 503 HOH B 642 SITE 1 AC5 4 ALA B 235 THR B 239 HEM B 501 B9L B 503 SITE 1 AC6 11 MET B 85 PHE B 169 PHE B 170 VAL B 231 SITE 2 AC6 11 ILE B 282 VAL B 285 THR B 286 PHE B 287 SITE 3 AC6 11 GLN B 387 HEM B 501 NO B 502 CRYST1 49.212 155.029 56.556 90.00 115.54 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020320 0.000000 0.009708 0.00000 SCALE2 0.000000 0.006450 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019596 0.00000