HEADER TRANSFERASE 24-JAN-19 6J9X TITLE CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI GAMBIENSE GLYCEROL KINASE TITLE 2 PHOSPHORYLATED AT THR12(PYROPHOSPHATASE REACTION) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCEROL KINASE; COMPND 3 CHAIN: A, C; COMPND 4 EC: 2.7.1.30; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GLYCEROL KINASE; COMPND 8 CHAIN: B, D; COMPND 9 EC: 2.7.1.30; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI GAMBIENSE; SOURCE 3 ORGANISM_TAXID: 31285; SOURCE 4 GENE: GK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: JM109 (DE3+PRARE2); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET151/D-TOPO; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI GAMBIENSE; SOURCE 12 ORGANISM_TAXID: 31285; SOURCE 13 GENE: GK; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: JM109 (DE3+PRARE2); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET151/D-TOPO KEYWDS TRYPANOSOMA, GLYCEROL KINASE, SUGAR KINASE SUPERFAMILY, TRANSFERASE, KEYWDS 2 GLYCOSOME EXPDTA X-RAY DIFFRACTION AUTHOR E.O.BALOGUN,T.CHISHIMA,M.ICHINOSE,D.K.INAOKA,Y.KIDO,B.IBRAHIM, AUTHOR 2 F.BRINGAUD,H.DE KONING,J.H.MCKERROW,Y.WATANABE,T.NOZAKI, AUTHOR 3 P.A.M.MICHELS,S.HARADA,K.KITA,T.SHIBA REVDAT 3 09-OCT-24 6J9X 1 REMARK REVDAT 2 22-NOV-23 6J9X 1 REMARK REVDAT 1 29-JAN-20 6J9X 0 JRNL AUTH E.O.BALOGUN JRNL TITL GLYCEROL KINASE OF AFRICAN HUMAN TRYPANOSOMES POSSESSES A JRNL TITL 2 PYROPHOSPHATASE ACTIVITY. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 58606 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3151 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4240 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.3470 REMARK 3 BIN FREE R VALUE SET COUNT : 226 REMARK 3 BIN FREE R VALUE : 0.4080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15836 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 50 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : 0.47000 REMARK 3 B33 (A**2) : -0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.355 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.283 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.999 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 16184 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 15552 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 21894 ; 1.589 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 35760 ; 0.844 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 2048 ; 7.378 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 656 ;36.606 ;22.988 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2802 ;19.552 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 128 ;20.014 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2460 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 18152 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 3696 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 8204 ; 6.967 ; 9.293 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 8203 ; 6.964 ; 9.292 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 10248 ; 9.849 ;13.932 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 10249 ; 9.849 ;13.933 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 7980 ; 7.041 ; 9.858 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 7980 ; 7.041 ; 9.858 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 11647 ;10.180 ;14.563 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 18649 ;13.182 ;75.049 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 18650 ;13.181 ;75.049 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6J9X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300010742. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61873 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.77000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3WXL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8-18% PEG 400, 0.1M HEPES, 11% 1,6 REMARK 280 -HEXANEDIOL, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 59.67000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 ILE A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 LEU A 512 REMARK 465 GLY B -5 REMARK 465 ILE B -4 REMARK 465 ASP B -3 REMARK 465 PRO B -2 REMARK 465 LEU B 512 REMARK 465 GLY C -5 REMARK 465 ILE C -4 REMARK 465 ASP C -3 REMARK 465 PRO C -2 REMARK 465 LEU C 512 REMARK 465 GLY D -5 REMARK 465 ILE D -4 REMARK 465 ASP D -3 REMARK 465 PRO D -2 REMARK 465 LEU D 512 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 0 -133.51 29.44 REMARK 500 SER A 13 166.27 178.85 REMARK 500 ARG A 73 -30.29 -130.12 REMARK 500 GLU A 85 -48.11 70.91 REMARK 500 SER A 178 37.17 -98.30 REMARK 500 THR A 185 -146.58 -123.22 REMARK 500 THR A 188 -72.17 133.07 REMARK 500 SER A 191 -28.90 110.70 REMARK 500 TRP A 203 -156.11 -58.85 REMARK 500 SER A 204 83.11 -165.30 REMARK 500 GLU A 226 -155.62 -139.94 REMARK 500 ASN A 243 -19.29 71.50 REMARK 500 ARG A 245 104.67 -57.80 REMARK 500 ARG A 289 128.61 -22.01 REMARK 500 SER A 291 75.79 -163.19 REMARK 500 LYS A 292 111.67 -12.40 REMARK 500 HIS A 293 -14.60 131.92 REMARK 500 PHE A 301 154.28 173.58 REMARK 500 ASP A 306 66.57 20.82 REMARK 500 ALA A 320 -76.11 -124.35 REMARK 500 ILE A 337 -75.05 -8.43 REMARK 500 SER A 346 4.88 -61.17 REMARK 500 ALA A 358 54.30 -100.62 REMARK 500 LEU A 363 -154.45 -103.45 REMARK 500 ALA A 364 -150.12 70.35 REMARK 500 LYS A 407 -102.42 -111.92 REMARK 500 ARG A 408 -62.24 28.66 REMARK 500 ALA A 410 -74.10 -161.96 REMARK 500 SER A 416 -160.25 -160.01 REMARK 500 GLU A 448 59.00 -54.40 REMARK 500 ALA A 461 5.76 -58.46 REMARK 500 TRP A 481 68.02 -112.28 REMARK 500 PRO A 486 173.90 -58.46 REMARK 500 SER A 487 117.00 170.12 REMARK 500 TRP A 509 -69.53 -153.50 REMARK 500 ALA A 510 139.25 -39.09 REMARK 500 HIS B 39 144.43 -171.38 REMARK 500 LYS B 74 -177.91 -172.54 REMARK 500 GLU B 85 -36.83 64.91 REMARK 500 ALA B 158 -55.56 -26.81 REMARK 500 ARG B 161 -6.83 -59.18 REMARK 500 LYS B 212 71.53 32.50 REMARK 500 ARG B 222 -164.54 -119.13 REMARK 500 GLU B 226 165.10 164.09 REMARK 500 ASN B 243 -68.70 89.97 REMARK 500 GLU B 244 -167.32 -105.68 REMARK 500 ILE B 252 132.04 -171.38 REMARK 500 ALA B 320 -94.65 -108.71 REMARK 500 PRO B 357 50.53 -96.84 REMARK 500 LEU B 363 -121.41 -116.20 REMARK 500 REMARK 500 THIS ENTRY HAS 113 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 291 LYS A 292 135.52 REMARK 500 ASP A 306 GLY A 307 149.39 REMARK 500 LYS A 407 ARG A 408 -142.58 REMARK 500 GLY A 411 LEU A 412 -148.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 717 DISTANCE = 6.89 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 601 DBREF 6J9X A 1 512 UNP D3KVM3 D3KVM3_TRYBG 1 512 DBREF 6J9X B 1 512 UNP D3KVM3 D3KVM3_TRYBG 1 512 DBREF 6J9X C 1 512 UNP D3KVM3 D3KVM3_TRYBG 1 512 DBREF 6J9X D 1 512 UNP D3KVM3 D3KVM3_TRYBG 1 512 SEQADV 6J9X GLY A -5 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X ILE A -4 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X ASP A -3 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X PRO A -2 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X PHE A -1 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X THR A 0 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X GLY B -5 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X ILE B -4 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X ASP B -3 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X PRO B -2 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X PHE B -1 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X THR B 0 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X GLY C -5 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X ILE C -4 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X ASP C -3 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X PRO C -2 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X PHE C -1 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X THR C 0 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X GLY D -5 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X ILE D -4 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X ASP D -3 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X PRO D -2 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X PHE D -1 UNP D3KVM3 EXPRESSION TAG SEQADV 6J9X THR D 0 UNP D3KVM3 EXPRESSION TAG SEQRES 1 A 518 GLY ILE ASP PRO PHE THR MET LYS TYR VAL GLY SER ILE SEQRES 2 A 518 ASP GLN GLY THR TPO SER THR ARG PHE ILE ILE PHE ASP SEQRES 3 A 518 GLU ARG GLN ARG PRO VAL SER VAL HIS GLN VAL PRO HIS SEQRES 4 A 518 THR GLN HIS THR PRO HIS PRO GLY TRP LEU GLU HIS ASP SEQRES 5 A 518 PRO MET GLU ILE PHE ARG SER ALA CYS LYS CYS MET SER SEQRES 6 A 518 VAL ALA ILE ALA LYS LEU ARG GLN LYS ASP ALA SER PHE SEQRES 7 A 518 ARG LYS ILE GLU ALA ILE GLY ILE THR ASN GLN ARG GLU SEQRES 8 A 518 THR THR VAL ALA TRP ASP ARG VAL THR LYS GLU PRO LEU SEQRES 9 A 518 CYS TYR ALA PRO VAL TRP ASN ASP LEU ARG THR TYR ASP SEQRES 10 A 518 ILE THR LYS LYS VAL THR ALA GLU LEU GLY GLY GLY ASP SEQRES 11 A 518 SER MET PHE ALA SER LYS ILE THR GLY LEU PRO VAL SER SEQRES 12 A 518 THR TYR PHE ALA ALA PHE LYS MET ARG TRP MET LEU GLU SEQRES 13 A 518 ASN VAL PRO ALA VAL ALA ASP ALA CYS ARG ARG GLY THR SEQRES 14 A 518 LEU CYS PHE GLY THR ILE ASP THR TRP LEU MET TYR LYS SEQRES 15 A 518 LEU SER GLY GLY LYS ALA PHE VAL THR ASP VAL THR ASN SEQRES 16 A 518 ALA SER ARG THR PHE LEU MET ASP LEU ARG THR ARG LYS SEQRES 17 A 518 TRP SER PRO GLU LEU CYS GLU LYS LEU LYS ILE PRO MET SEQRES 18 A 518 GLU THR LEU PRO GLU ILE ARG SER ASN SER GLU LEU PHE SEQRES 19 A 518 GLY TYR VAL GLU THR ASP GLU CYS GLY VAL ALA ALA ALA SEQRES 20 A 518 LEU ASN GLU ARG THR PRO ILE MET GLY SER ILE GLY ASP SEQRES 21 A 518 GLN GLN SER ALA LEU PHE GLY ASN MET CYS PHE GLU LYS SEQRES 22 A 518 GLY GLU ALA LYS ASN THR TYR GLY THR GLY CYS PHE LEU SEQRES 23 A 518 LEU MET ASN VAL GLY GLU GLU ALA ARG PHE SER LYS HIS SEQRES 24 A 518 GLY LEU LEU SER THR VAL GLY PHE GLN VAL GLY ARG ASP SEQRES 25 A 518 GLY PRO CYS TYR TYR ALA LEU GLU GLY ALA ILE ALA CYS SEQRES 26 A 518 ALA GLY ALA THR VAL GLU TRP MET ARG ARG ASN MET ASN SEQRES 27 A 518 LEU PHE SER HIS ILE THR GLU CYS GLU LYS LEU ALA ARG SEQRES 28 A 518 SER VAL PRO GLY THR GLN GLY ILE VAL PHE VAL PRO ALA SEQRES 29 A 518 PHE SER GLY LEU LEU ALA PRO TYR TRP ASP PRO SER ALA SEQRES 30 A 518 ARG GLY THR ILE VAL GLY MET THR LEU LYS THR THR ARG SEQRES 31 A 518 ALA HIS VAL ILE ARG ALA ALA LEU GLN ALA ILE ALA LEU SEQRES 32 A 518 GLN LEU ASN ASP VAL VAL GLY SER MET LYS ARG ASP ALA SEQRES 33 A 518 GLY LEU ASN LEU SER SER LEU ARG VAL ASP GLY GLY LEU SEQRES 34 A 518 SER LYS ASN GLY LEU LEU MET GLU ILE GLN ALA SER LEU SEQRES 35 A 518 LEU GLY VAL ASP ILE LEU VAL PRO SER MET HIS GLU THR SEQRES 36 A 518 THR ALA LEU GLY ALA ALA LEU CYS ALA GLY LEU ALA ALA SEQRES 37 A 518 GLY VAL TRP THR SER LEU GLU GLU VAL LYS ALA VAL SER SEQRES 38 A 518 ARG ARG GLU ASN SER TRP LYS THR VAL SER PRO SER GLY SEQRES 39 A 518 SER ALA MET GLU ARG GLU ALA MET ILE ALA GLU TRP ARG SEQRES 40 A 518 GLU ALA LEU LYS ARG THR LYS TRP ALA LYS LEU SEQRES 1 B 518 GLY ILE ASP PRO PHE THR MET LYS TYR VAL GLY SER ILE SEQRES 2 B 518 ASP GLN GLY THR THR SER THR ARG PHE ILE ILE PHE ASP SEQRES 3 B 518 GLU ARG GLN ARG PRO VAL SER VAL HIS GLN VAL PRO HIS SEQRES 4 B 518 THR GLN HIS THR PRO HIS PRO GLY TRP LEU GLU HIS ASP SEQRES 5 B 518 PRO MET GLU ILE PHE ARG SER ALA CYS LYS CYS MET SER SEQRES 6 B 518 VAL ALA ILE ALA LYS LEU ARG GLN LYS ASP ALA SER PHE SEQRES 7 B 518 ARG LYS ILE GLU ALA ILE GLY ILE THR ASN GLN ARG GLU SEQRES 8 B 518 THR THR VAL ALA TRP ASP ARG VAL THR LYS GLU PRO LEU SEQRES 9 B 518 CYS TYR ALA PRO VAL TRP ASN ASP LEU ARG THR TYR ASP SEQRES 10 B 518 ILE THR LYS LYS VAL THR ALA GLU LEU GLY GLY GLY ASP SEQRES 11 B 518 SER MET PHE ALA SER LYS ILE THR GLY LEU PRO VAL SER SEQRES 12 B 518 THR TYR PHE ALA ALA PHE LYS MET ARG TRP MET LEU GLU SEQRES 13 B 518 ASN VAL PRO ALA VAL ALA ASP ALA CYS ARG ARG GLY THR SEQRES 14 B 518 LEU CYS PHE GLY THR ILE ASP THR TRP LEU MET TYR LYS SEQRES 15 B 518 LEU SER GLY GLY LYS ALA PHE VAL THR ASP VAL THR ASN SEQRES 16 B 518 ALA SER ARG THR PHE LEU MET ASP LEU ARG THR ARG LYS SEQRES 17 B 518 TRP SER PRO GLU LEU CYS GLU LYS LEU LYS ILE PRO MET SEQRES 18 B 518 GLU THR LEU PRO GLU ILE ARG SER ASN SER GLU LEU PHE SEQRES 19 B 518 GLY TYR VAL GLU THR ASP GLU CYS GLY VAL ALA ALA ALA SEQRES 20 B 518 LEU ASN GLU ARG THR PRO ILE MET GLY SER ILE GLY ASP SEQRES 21 B 518 GLN GLN SER ALA LEU PHE GLY ASN MET CYS PHE GLU LYS SEQRES 22 B 518 GLY GLU ALA LYS ASN THR TYR GLY THR GLY CYS PHE LEU SEQRES 23 B 518 LEU MET ASN VAL GLY GLU GLU ALA ARG PHE SER LYS HIS SEQRES 24 B 518 GLY LEU LEU SER THR VAL GLY PHE GLN VAL GLY ARG ASP SEQRES 25 B 518 GLY PRO CYS TYR TYR ALA LEU GLU GLY ALA ILE ALA CYS SEQRES 26 B 518 ALA GLY ALA THR VAL GLU TRP MET ARG ARG ASN MET ASN SEQRES 27 B 518 LEU PHE SER HIS ILE THR GLU CYS GLU LYS LEU ALA ARG SEQRES 28 B 518 SER VAL PRO GLY THR GLN GLY ILE VAL PHE VAL PRO ALA SEQRES 29 B 518 PHE SER GLY LEU LEU ALA PRO TYR TRP ASP PRO SER ALA SEQRES 30 B 518 ARG GLY THR ILE VAL GLY MET THR LEU LYS THR THR ARG SEQRES 31 B 518 ALA HIS VAL ILE ARG ALA ALA LEU GLN ALA ILE ALA LEU SEQRES 32 B 518 GLN LEU ASN ASP VAL VAL GLY SER MET LYS ARG ASP ALA SEQRES 33 B 518 GLY LEU ASN LEU SER SER LEU ARG VAL ASP GLY GLY LEU SEQRES 34 B 518 SER LYS ASN GLY LEU LEU MET GLU ILE GLN ALA SER LEU SEQRES 35 B 518 LEU GLY VAL ASP ILE LEU VAL PRO SER MET HIS GLU THR SEQRES 36 B 518 THR ALA LEU GLY ALA ALA LEU CYS ALA GLY LEU ALA ALA SEQRES 37 B 518 GLY VAL TRP THR SER LEU GLU GLU VAL LYS ALA VAL SER SEQRES 38 B 518 ARG ARG GLU ASN SER TRP LYS THR VAL SER PRO SER GLY SEQRES 39 B 518 SER ALA MET GLU ARG GLU ALA MET ILE ALA GLU TRP ARG SEQRES 40 B 518 GLU ALA LEU LYS ARG THR LYS TRP ALA LYS LEU SEQRES 1 C 518 GLY ILE ASP PRO PHE THR MET LYS TYR VAL GLY SER ILE SEQRES 2 C 518 ASP GLN GLY THR TPO SER THR ARG PHE ILE ILE PHE ASP SEQRES 3 C 518 GLU ARG GLN ARG PRO VAL SER VAL HIS GLN VAL PRO HIS SEQRES 4 C 518 THR GLN HIS THR PRO HIS PRO GLY TRP LEU GLU HIS ASP SEQRES 5 C 518 PRO MET GLU ILE PHE ARG SER ALA CYS LYS CYS MET SER SEQRES 6 C 518 VAL ALA ILE ALA LYS LEU ARG GLN LYS ASP ALA SER PHE SEQRES 7 C 518 ARG LYS ILE GLU ALA ILE GLY ILE THR ASN GLN ARG GLU SEQRES 8 C 518 THR THR VAL ALA TRP ASP ARG VAL THR LYS GLU PRO LEU SEQRES 9 C 518 CYS TYR ALA PRO VAL TRP ASN ASP LEU ARG THR TYR ASP SEQRES 10 C 518 ILE THR LYS LYS VAL THR ALA GLU LEU GLY GLY GLY ASP SEQRES 11 C 518 SER MET PHE ALA SER LYS ILE THR GLY LEU PRO VAL SER SEQRES 12 C 518 THR TYR PHE ALA ALA PHE LYS MET ARG TRP MET LEU GLU SEQRES 13 C 518 ASN VAL PRO ALA VAL ALA ASP ALA CYS ARG ARG GLY THR SEQRES 14 C 518 LEU CYS PHE GLY THR ILE ASP THR TRP LEU MET TYR LYS SEQRES 15 C 518 LEU SER GLY GLY LYS ALA PHE VAL THR ASP VAL THR ASN SEQRES 16 C 518 ALA SER ARG THR PHE LEU MET ASP LEU ARG THR ARG LYS SEQRES 17 C 518 TRP SER PRO GLU LEU CYS GLU LYS LEU LYS ILE PRO MET SEQRES 18 C 518 GLU THR LEU PRO GLU ILE ARG SER ASN SER GLU LEU PHE SEQRES 19 C 518 GLY TYR VAL GLU THR ASP GLU CYS GLY VAL ALA ALA ALA SEQRES 20 C 518 LEU ASN GLU ARG THR PRO ILE MET GLY SER ILE GLY ASP SEQRES 21 C 518 GLN GLN SER ALA LEU PHE GLY ASN MET CYS PHE GLU LYS SEQRES 22 C 518 GLY GLU ALA LYS ASN THR TYR GLY THR GLY CYS PHE LEU SEQRES 23 C 518 LEU MET ASN VAL GLY GLU GLU ALA ARG PHE SER LYS HIS SEQRES 24 C 518 GLY LEU LEU SER THR VAL GLY PHE GLN VAL GLY ARG ASP SEQRES 25 C 518 GLY PRO CYS TYR TYR ALA LEU GLU GLY ALA ILE ALA CYS SEQRES 26 C 518 ALA GLY ALA THR VAL GLU TRP MET ARG ARG ASN MET ASN SEQRES 27 C 518 LEU PHE SER HIS ILE THR GLU CYS GLU LYS LEU ALA ARG SEQRES 28 C 518 SER VAL PRO GLY THR GLN GLY ILE VAL PHE VAL PRO ALA SEQRES 29 C 518 PHE SER GLY LEU LEU ALA PRO TYR TRP ASP PRO SER ALA SEQRES 30 C 518 ARG GLY THR ILE VAL GLY MET THR LEU LYS THR THR ARG SEQRES 31 C 518 ALA HIS VAL ILE ARG ALA ALA LEU GLN ALA ILE ALA LEU SEQRES 32 C 518 GLN LEU ASN ASP VAL VAL GLY SER MET LYS ARG ASP ALA SEQRES 33 C 518 GLY LEU ASN LEU SER SER LEU ARG VAL ASP GLY GLY LEU SEQRES 34 C 518 SER LYS ASN GLY LEU LEU MET GLU ILE GLN ALA SER LEU SEQRES 35 C 518 LEU GLY VAL ASP ILE LEU VAL PRO SER MET HIS GLU THR SEQRES 36 C 518 THR ALA LEU GLY ALA ALA LEU CYS ALA GLY LEU ALA ALA SEQRES 37 C 518 GLY VAL TRP THR SER LEU GLU GLU VAL LYS ALA VAL SER SEQRES 38 C 518 ARG ARG GLU ASN SER TRP LYS THR VAL SER PRO SER GLY SEQRES 39 C 518 SER ALA MET GLU ARG GLU ALA MET ILE ALA GLU TRP ARG SEQRES 40 C 518 GLU ALA LEU LYS ARG THR LYS TRP ALA LYS LEU SEQRES 1 D 518 GLY ILE ASP PRO PHE THR MET LYS TYR VAL GLY SER ILE SEQRES 2 D 518 ASP GLN GLY THR THR SER THR ARG PHE ILE ILE PHE ASP SEQRES 3 D 518 GLU ARG GLN ARG PRO VAL SER VAL HIS GLN VAL PRO HIS SEQRES 4 D 518 THR GLN HIS THR PRO HIS PRO GLY TRP LEU GLU HIS ASP SEQRES 5 D 518 PRO MET GLU ILE PHE ARG SER ALA CYS LYS CYS MET SER SEQRES 6 D 518 VAL ALA ILE ALA LYS LEU ARG GLN LYS ASP ALA SER PHE SEQRES 7 D 518 ARG LYS ILE GLU ALA ILE GLY ILE THR ASN GLN ARG GLU SEQRES 8 D 518 THR THR VAL ALA TRP ASP ARG VAL THR LYS GLU PRO LEU SEQRES 9 D 518 CYS TYR ALA PRO VAL TRP ASN ASP LEU ARG THR TYR ASP SEQRES 10 D 518 ILE THR LYS LYS VAL THR ALA GLU LEU GLY GLY GLY ASP SEQRES 11 D 518 SER MET PHE ALA SER LYS ILE THR GLY LEU PRO VAL SER SEQRES 12 D 518 THR TYR PHE ALA ALA PHE LYS MET ARG TRP MET LEU GLU SEQRES 13 D 518 ASN VAL PRO ALA VAL ALA ASP ALA CYS ARG ARG GLY THR SEQRES 14 D 518 LEU CYS PHE GLY THR ILE ASP THR TRP LEU MET TYR LYS SEQRES 15 D 518 LEU SER GLY GLY LYS ALA PHE VAL THR ASP VAL THR ASN SEQRES 16 D 518 ALA SER ARG THR PHE LEU MET ASP LEU ARG THR ARG LYS SEQRES 17 D 518 TRP SER PRO GLU LEU CYS GLU LYS LEU LYS ILE PRO MET SEQRES 18 D 518 GLU THR LEU PRO GLU ILE ARG SER ASN SER GLU LEU PHE SEQRES 19 D 518 GLY TYR VAL GLU THR ASP GLU CYS GLY VAL ALA ALA ALA SEQRES 20 D 518 LEU ASN GLU ARG THR PRO ILE MET GLY SER ILE GLY ASP SEQRES 21 D 518 GLN GLN SER ALA LEU PHE GLY ASN MET CYS PHE GLU LYS SEQRES 22 D 518 GLY GLU ALA LYS ASN THR TYR GLY THR GLY CYS PHE LEU SEQRES 23 D 518 LEU MET ASN VAL GLY GLU GLU ALA ARG PHE SER LYS HIS SEQRES 24 D 518 GLY LEU LEU SER THR VAL GLY PHE GLN VAL GLY ARG ASP SEQRES 25 D 518 GLY PRO CYS TYR TYR ALA LEU GLU GLY ALA ILE ALA CYS SEQRES 26 D 518 ALA GLY ALA THR VAL GLU TRP MET ARG ARG ASN MET ASN SEQRES 27 D 518 LEU PHE SER HIS ILE THR GLU CYS GLU LYS LEU ALA ARG SEQRES 28 D 518 SER VAL PRO GLY THR GLN GLY ILE VAL PHE VAL PRO ALA SEQRES 29 D 518 PHE SER GLY LEU LEU ALA PRO TYR TRP ASP PRO SER ALA SEQRES 30 D 518 ARG GLY THR ILE VAL GLY MET THR LEU LYS THR THR ARG SEQRES 31 D 518 ALA HIS VAL ILE ARG ALA ALA LEU GLN ALA ILE ALA LEU SEQRES 32 D 518 GLN LEU ASN ASP VAL VAL GLY SER MET LYS ARG ASP ALA SEQRES 33 D 518 GLY LEU ASN LEU SER SER LEU ARG VAL ASP GLY GLY LEU SEQRES 34 D 518 SER LYS ASN GLY LEU LEU MET GLU ILE GLN ALA SER LEU SEQRES 35 D 518 LEU GLY VAL ASP ILE LEU VAL PRO SER MET HIS GLU THR SEQRES 36 D 518 THR ALA LEU GLY ALA ALA LEU CYS ALA GLY LEU ALA ALA SEQRES 37 D 518 GLY VAL TRP THR SER LEU GLU GLU VAL LYS ALA VAL SER SEQRES 38 D 518 ARG ARG GLU ASN SER TRP LYS THR VAL SER PRO SER GLY SEQRES 39 D 518 SER ALA MET GLU ARG GLU ALA MET ILE ALA GLU TRP ARG SEQRES 40 D 518 GLU ALA LEU LYS ARG THR LYS TRP ALA LYS LEU MODRES 6J9X TPO A 12 THR MODIFIED RESIDUE MODRES 6J9X TPO C 12 THR MODIFIED RESIDUE HET TPO A 12 11 HET TPO C 12 11 HET GOL A 601 6 HET GOL B 601 6 HET GOL C 601 6 HET GOL D 601 6 HETNAM TPO PHOSPHOTHREONINE HETNAM GOL GLYCEROL HETSYN TPO PHOSPHONOTHREONINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 TPO 2(C4 H10 N O6 P) FORMUL 5 GOL 4(C3 H8 O3) FORMUL 9 HOH *50(H2 O) HELIX 1 AA1 ASP A 46 ASP A 69 1 24 HELIX 2 AA2 THR A 109 LEU A 120 1 12 HELIX 3 AA3 SER A 125 PHE A 127 5 3 HELIX 4 AA4 ALA A 128 GLY A 133 1 6 HELIX 5 AA5 PHE A 140 VAL A 152 1 13 HELIX 6 AA6 VAL A 152 ARG A 161 1 10 HELIX 7 AA7 ILE A 169 SER A 178 1 10 HELIX 8 AA8 SER A 204 LEU A 211 1 8 HELIX 9 AA9 GLY A 237 ASN A 243 1 7 HELIX 10 AB1 ASP A 254 ASN A 262 1 9 HELIX 11 AB2 ALA A 320 ASN A 330 1 11 HELIX 12 AB3 THR A 338 SER A 346 1 9 HELIX 13 AB4 THR A 383 MET A 406 1 24 HELIX 14 AB5 ASN A 426 GLY A 438 1 13 HELIX 15 AB6 GLU A 448 ALA A 461 1 14 HELIX 16 AB7 SER A 467 ASN A 479 1 13 HELIX 17 AB8 SER A 489 LYS A 505 1 17 HELIX 18 AB9 ASP B 46 ASP B 69 1 24 HELIX 19 AC1 THR B 109 GLY B 122 1 14 HELIX 20 AC2 ALA B 128 GLY B 133 1 6 HELIX 21 AC3 PHE B 140 VAL B 152 1 13 HELIX 22 AC4 VAL B 152 GLY B 162 1 11 HELIX 23 AC5 ILE B 169 SER B 178 1 10 HELIX 24 AC6 VAL B 187 SER B 191 1 5 HELIX 25 AC7 SER B 204 LEU B 211 1 8 HELIX 26 AC8 PRO B 214 LEU B 218 5 5 HELIX 27 AC9 VAL B 238 ASN B 243 1 6 HELIX 28 AD1 ASP B 254 ASN B 262 1 9 HELIX 29 AD2 ALA B 320 ASN B 330 1 11 HELIX 30 AD3 ILE B 337 SER B 346 1 10 HELIX 31 AD4 THR B 383 GLY B 411 1 29 HELIX 32 AD5 GLY B 422 LYS B 425 5 4 HELIX 33 AD6 ASN B 426 GLY B 438 1 13 HELIX 34 AD7 GLU B 448 ALA B 461 1 14 HELIX 35 AD8 SER B 467 ASN B 479 1 13 HELIX 36 AD9 SER B 489 LYS B 505 1 17 HELIX 37 AE1 ASP C 46 ASP C 69 1 24 HELIX 38 AE2 THR C 109 LEU C 120 1 12 HELIX 39 AE3 ALA C 128 GLY C 133 1 6 HELIX 40 AE4 PHE C 140 VAL C 152 1 13 HELIX 41 AE5 VAL C 152 ARG C 161 1 10 HELIX 42 AE6 ILE C 169 GLY C 179 1 11 HELIX 43 AE7 VAL C 187 SER C 191 1 5 HELIX 44 AE8 SER C 204 LEU C 211 1 8 HELIX 45 AE9 PRO C 214 LEU C 218 5 5 HELIX 46 AF1 GLY C 237 ASN C 243 1 7 HELIX 47 AF2 ASP C 254 ASN C 262 1 9 HELIX 48 AF3 ALA C 320 ASN C 330 1 11 HELIX 49 AF4 ILE C 337 SER C 346 1 10 HELIX 50 AF5 THR C 383 GLY C 411 1 29 HELIX 51 AF6 ASN C 426 GLY C 438 1 13 HELIX 52 AF7 GLU C 448 ALA C 462 1 15 HELIX 53 AF8 SER C 467 ASN C 479 1 13 HELIX 54 AF9 SER C 489 LYS C 508 1 20 HELIX 55 AG1 ASP D 46 ASP D 69 1 24 HELIX 56 AG2 THR D 109 GLY D 121 1 13 HELIX 57 AG3 ALA D 128 GLY D 133 1 6 HELIX 58 AG4 PHE D 140 VAL D 152 1 13 HELIX 59 AG5 VAL D 152 GLY D 162 1 11 HELIX 60 AG6 ILE D 169 SER D 178 1 10 HELIX 61 AG7 VAL D 187 SER D 191 1 5 HELIX 62 AG8 SER D 204 LYS D 212 1 9 HELIX 63 AG9 PRO D 214 LEU D 218 5 5 HELIX 64 AH1 GLY D 237 ASN D 243 1 7 HELIX 65 AH2 ASP D 254 ASN D 262 1 9 HELIX 66 AH3 ALA D 320 ASN D 330 1 11 HELIX 67 AH4 ILE D 337 SER D 346 1 10 HELIX 68 AH5 THR D 383 GLY D 411 1 29 HELIX 69 AH6 GLY D 422 LYS D 425 5 4 HELIX 70 AH7 ASN D 426 GLY D 438 1 13 HELIX 71 AH8 GLU D 448 ALA D 462 1 15 HELIX 72 AH9 SER D 467 ASN D 479 1 13 HELIX 73 AI1 SER D 489 ARG D 506 1 18 SHEET 1 AA1 5 PRO A 25 PRO A 32 0 SHEET 2 AA1 5 SER A 13 ASP A 20 -1 N THR A 14 O VAL A 31 SHEET 3 AA1 5 TYR A 3 GLN A 9 -1 N VAL A 4 O PHE A 19 SHEET 4 AA1 5 ALA A 77 ASN A 82 1 O GLY A 79 N GLY A 5 SHEET 5 AA1 5 ILE A 252 GLY A 253 1 O ILE A 252 N ILE A 80 SHEET 1 AA2 2 GLU A 44 HIS A 45 0 SHEET 2 AA2 2 ALA A 101 PRO A 102 -1 O ALA A 101 N HIS A 45 SHEET 1 AA3 2 THR A 87 ASP A 91 0 SHEET 2 AA3 2 LEU A 164 THR A 168 -1 O GLY A 167 N VAL A 88 SHEET 1 AA4 2 SER A 225 TYR A 230 0 SHEET 2 AA4 2 PRO A 247 GLY A 250 -1 O ILE A 248 N PHE A 228 SHEET 1 AA5 7 LEU A 296 GLN A 302 0 SHEET 2 AA5 7 CYS A 309 ILE A 317 -1 O ALA A 312 N THR A 298 SHEET 3 AA5 7 CYS A 278 ASN A 283 -1 N LEU A 280 O GLY A 315 SHEET 4 AA5 7 ALA A 270 TYR A 274 -1 N LYS A 271 O LEU A 281 SHEET 5 AA5 7 LEU A 417 ASP A 420 1 O ASP A 420 N ASN A 272 SHEET 6 AA5 7 ILE A 441 PRO A 444 1 O LEU A 442 N VAL A 419 SHEET 7 AA5 7 TRP A 481 VAL A 484 -1 O LYS A 482 N VAL A 443 SHEET 1 AA6 4 VAL A 354 VAL A 356 0 SHEET 2 AA6 4 GLY A 373 MET A 378 -1 O VAL A 376 N VAL A 354 SHEET 3 AA6 4 GLY B 373 MET B 378 -1 O ILE B 375 N ILE A 375 SHEET 4 AA6 4 VAL B 354 PRO B 357 -1 N VAL B 356 O THR B 374 SHEET 1 AA7 6 ARG B 24 PRO B 32 0 SHEET 2 AA7 6 SER B 13 ASP B 20 -1 N ILE B 18 O VAL B 26 SHEET 3 AA7 6 TYR B 3 GLN B 9 -1 N SER B 6 O ILE B 17 SHEET 4 AA7 6 ILE B 78 ASN B 82 1 O GLY B 79 N ILE B 7 SHEET 5 AA7 6 PRO B 247 GLY B 253 1 O ILE B 252 N ILE B 80 SHEET 6 AA7 6 SER B 225 TYR B 230 -1 N PHE B 228 O ILE B 248 SHEET 1 AA8 3 GLN B 35 HIS B 36 0 SHEET 2 AA8 3 GLU B 44 HIS B 45 -1 O GLU B 44 N HIS B 36 SHEET 3 AA8 3 ALA B 101 PRO B 102 -1 O ALA B 101 N HIS B 45 SHEET 1 AA9 3 GLU B 96 PRO B 97 0 SHEET 2 AA9 3 THR B 87 ASP B 91 -1 N ASP B 91 O GLU B 96 SHEET 3 AA9 3 LEU B 164 THR B 168 -1 O GLY B 167 N VAL B 88 SHEET 1 AB1 2 VAL B 184 ASP B 186 0 SHEET 2 AB1 2 GLU B 220 ARG B 222 1 O ARG B 222 N THR B 185 SHEET 1 AB2 2 MET B 196 ASP B 197 0 SHEET 2 AB2 2 LYS B 202 TRP B 203 -1 O LYS B 202 N ASP B 197 SHEET 1 AB3 7 LEU B 296 GLN B 302 0 SHEET 2 AB3 7 CYS B 309 ILE B 317 -1 O TYR B 310 N GLY B 300 SHEET 3 AB3 7 CYS B 278 ASN B 283 -1 N LEU B 280 O GLY B 315 SHEET 4 AB3 7 GLU B 269 TYR B 274 -1 N THR B 273 O PHE B 279 SHEET 5 AB3 7 SER B 416 ASP B 420 1 O ASP B 420 N TYR B 274 SHEET 6 AB3 7 ILE B 441 PRO B 444 1 O LEU B 442 N VAL B 419 SHEET 7 AB3 7 TRP B 481 VAL B 484 -1 O VAL B 484 N ILE B 441 SHEET 1 AB4 6 PRO C 25 PRO C 32 0 SHEET 2 AB4 6 SER C 13 ASP C 20 -1 N ILE C 18 O VAL C 26 SHEET 3 AB4 6 TYR C 3 GLN C 9 -1 N VAL C 4 O PHE C 19 SHEET 4 AB4 6 ILE C 78 ASN C 82 1 O GLY C 79 N GLY C 5 SHEET 5 AB4 6 PRO C 247 GLY C 253 1 O ILE C 252 N ILE C 80 SHEET 6 AB4 6 SER C 225 TYR C 230 -1 N PHE C 228 O ILE C 248 SHEET 1 AB5 2 GLU C 44 HIS C 45 0 SHEET 2 AB5 2 ALA C 101 PRO C 102 -1 O ALA C 101 N HIS C 45 SHEET 1 AB6 3 GLU C 96 PRO C 97 0 SHEET 2 AB6 3 THR C 87 ASP C 91 -1 N ASP C 91 O GLU C 96 SHEET 3 AB6 3 LEU C 164 THR C 168 -1 O GLY C 167 N VAL C 88 SHEET 1 AB7 2 VAL C 184 ASP C 186 0 SHEET 2 AB7 2 GLU C 220 ARG C 222 1 O GLU C 220 N THR C 185 SHEET 1 AB8 2 MET C 196 ASP C 197 0 SHEET 2 AB8 2 LYS C 202 TRP C 203 -1 O LYS C 202 N ASP C 197 SHEET 1 AB9 7 LEU C 296 GLN C 302 0 SHEET 2 AB9 7 CYS C 309 ILE C 317 -1 O ALA C 312 N THR C 298 SHEET 3 AB9 7 CYS C 278 ASN C 283 -1 N LEU C 280 O GLY C 315 SHEET 4 AB9 7 GLU C 269 TYR C 274 -1 N GLU C 269 O ASN C 283 SHEET 5 AB9 7 SER C 416 ASP C 420 1 O ASP C 420 N TYR C 274 SHEET 6 AB9 7 ILE C 441 LEU C 442 1 O LEU C 442 N LEU C 417 SHEET 7 AB9 7 THR C 483 VAL C 484 -1 O VAL C 484 N ILE C 441 SHEET 1 AC1 4 VAL C 354 VAL C 356 0 SHEET 2 AC1 4 GLY C 373 MET C 378 -1 O THR C 374 N VAL C 356 SHEET 3 AC1 4 GLY D 373 MET D 378 -1 O ILE D 375 N ILE C 375 SHEET 4 AC1 4 VAL D 354 VAL D 356 -1 N VAL D 354 O VAL D 376 SHEET 1 AC2 6 PRO D 25 PRO D 32 0 SHEET 2 AC2 6 SER D 13 ASP D 20 -1 N ILE D 18 O VAL D 26 SHEET 3 AC2 6 TYR D 3 GLN D 9 -1 N VAL D 4 O PHE D 19 SHEET 4 AC2 6 ALA D 77 ASN D 82 1 O ALA D 77 N GLY D 5 SHEET 5 AC2 6 PRO D 247 GLY D 253 1 O MET D 249 N ILE D 78 SHEET 6 AC2 6 SER D 225 TYR D 230 -1 N PHE D 228 O ILE D 248 SHEET 1 AC3 2 GLU D 44 HIS D 45 0 SHEET 2 AC3 2 ALA D 101 PRO D 102 -1 O ALA D 101 N HIS D 45 SHEET 1 AC4 3 GLU D 96 PRO D 97 0 SHEET 2 AC4 3 THR D 87 ASP D 91 -1 N ASP D 91 O GLU D 96 SHEET 3 AC4 3 LEU D 164 THR D 168 -1 O CYS D 165 N TRP D 90 SHEET 1 AC5 2 VAL D 184 ASP D 186 0 SHEET 2 AC5 2 GLU D 220 ARG D 222 1 O GLU D 220 N THR D 185 SHEET 1 AC6 2 MET D 196 ASP D 197 0 SHEET 2 AC6 2 LYS D 202 TRP D 203 -1 O LYS D 202 N ASP D 197 SHEET 1 AC7 7 LEU D 296 GLN D 302 0 SHEET 2 AC7 7 CYS D 309 ILE D 317 -1 O TYR D 310 N GLY D 300 SHEET 3 AC7 7 CYS D 278 GLY D 285 -1 N LEU D 280 O GLY D 315 SHEET 4 AC7 7 GLU D 269 TYR D 274 -1 N THR D 273 O PHE D 279 SHEET 5 AC7 7 SER D 416 ASP D 420 1 O ASP D 420 N TYR D 274 SHEET 6 AC7 7 ILE D 441 PRO D 444 1 O LEU D 442 N LEU D 417 SHEET 7 AC7 7 TRP D 481 VAL D 484 -1 O VAL D 484 N ILE D 441 LINK C THR A 11 N TPO A 12 1555 1555 1.32 LINK C TPO A 12 N SER A 13 1555 1555 1.32 LINK C THR C 11 N TPO C 12 1555 1555 1.31 LINK C TPO C 12 N SER C 13 1555 1555 1.33 CISPEP 1 ASP A 409 ALA A 410 0 -5.26 CISPEP 2 ALA A 410 GLY A 411 0 6.04 SITE 1 AC1 5 GLN A 83 ARG A 84 TRP A 104 ASP A 254 SITE 2 AC1 5 PHE A 279 SITE 1 AC2 5 ARG B 84 GLU B 85 TRP B 104 ASP B 254 SITE 2 AC2 5 GLN B 255 SITE 1 AC3 8 ARG C 84 GLU C 85 TRP C 104 ARG C 192 SITE 2 AC3 8 ASP C 254 GLN C 255 PHE C 279 HOH C 707 SITE 1 AC4 6 ARG D 84 GLU D 85 TRP D 104 ASP D 254 SITE 2 AC4 6 GLN D 255 PHE D 279 CRYST1 62.380 119.340 154.730 90.00 90.82 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016031 0.000000 0.000229 0.00000 SCALE2 0.000000 0.008379 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006464 0.00000