data_6JC3 # _entry.id 6JC3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6JC3 pdb_00006jc3 10.2210/pdb6jc3/pdb WWPDB D_1300010128 ? ? EMDB EMD-9793 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-07 2 'Structure model' 1 1 2019-08-14 3 'Structure model' 1 2 2019-11-06 4 'Structure model' 1 3 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' Other 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' cell 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.title' 2 2 'Structure model' '_citation_author.identifier_ORCID' 3 3 'Structure model' '_cell.Z_PDB' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6JC3 _pdbx_database_status.recvd_initial_deposition_date 2019-01-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'The Cryo-EM structure of nucleoprotein-RNA complex of Newcastle disease virus' _pdbx_database_related.db_id EMD-9793 _pdbx_database_related.content_type 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Song, X.' 1 ? 'Shan, H.' 2 ? 'Zhu, Y.' 3 ? 'Ding, W.' 4 ? 'Ouyang, S.' 5 ? 'Shen, Q.T.' 6 ? 'Liu, Z.J.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Self-capping of nucleoprotein filaments protects the Newcastle disease virus genome.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.45057 _citation.pdbx_database_id_PubMed 31290740 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Song, X.' 1 0000-0002-5088-3783 primary 'Shan, H.' 2 ? primary 'Zhu, Y.' 3 ? primary 'Hu, S.' 4 ? primary 'Xue, L.' 5 ? primary 'Chen, Y.' 6 ? primary 'Ding, W.' 7 ? primary 'Niu, T.' 8 ? primary 'Gu, J.' 9 ? primary 'Ouyang, S.' 10 ? primary 'Shen, Q.T.' 11 ? primary 'Liu, Z.J.' 12 0000-0001-7279-2893 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Nucleocapsid 43830.703 1 ? ? ? ? 2 polymer syn polyU 1792.037 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Nucleocapsid protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSSVFDEYEQLLAAQTRPNGALGGGEKGSTLKVEVPVFTLNSDDPEDRWNFAVFCLRIAVSEDANKPLRQGALISLLCSH SQVMRNHVALAGKQNEATLAVLEIDGFTNGVPQFNNRSGVSEERAQRFMMIAGSLPRACSNGTPFVTAGVEDDAPEDITD TLERILSIQAQVWVTVAKAMTAYETADESETRRINKYMQQGRVQKKYILHPVCRSAIQLTIRQSLAVRIFLVSELKRGRN TAGGTSTYYNLVGDVDSYIRNTGLTAFFLTLKYGINTKTSALALSSLSGDIQKMKQLMRLYRMKGDNAPYMTLLGDSDQM SFAPAEYAQLYSFAMGMASVLDKGTGKYQFARDFMSTSFWRLGVEYAQAQGSSINEDMAAELKLTPAARRGLAAAAQR ; ;MSSVFDEYEQLLAAQTRPNGALGGGEKGSTLKVEVPVFTLNSDDPEDRWNFAVFCLRIAVSEDANKPLRQGALISLLCSH SQVMRNHVALAGKQNEATLAVLEIDGFTNGVPQFNNRSGVSEERAQRFMMIAGSLPRACSNGTPFVTAGVEDDAPEDITD TLERILSIQAQVWVTVAKAMTAYETADESETRRINKYMQQGRVQKKYILHPVCRSAIQLTIRQSLAVRIFLVSELKRGRN TAGGTSTYYNLVGDVDSYIRNTGLTAFFLTLKYGINTKTSALALSSLSGDIQKMKQLMRLYRMKGDNAPYMTLLGDSDQM SFAPAEYAQLYSFAMGMASVLDKGTGKYQFARDFMSTSFWRLGVEYAQAQGSSINEDMAAELKLTPAARRGLAAAAQR ; A ? 2 polyribonucleotide no no UUUUUU UUUUUU N ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 SER n 1 4 VAL n 1 5 PHE n 1 6 ASP n 1 7 GLU n 1 8 TYR n 1 9 GLU n 1 10 GLN n 1 11 LEU n 1 12 LEU n 1 13 ALA n 1 14 ALA n 1 15 GLN n 1 16 THR n 1 17 ARG n 1 18 PRO n 1 19 ASN n 1 20 GLY n 1 21 ALA n 1 22 LEU n 1 23 GLY n 1 24 GLY n 1 25 GLY n 1 26 GLU n 1 27 LYS n 1 28 GLY n 1 29 SER n 1 30 THR n 1 31 LEU n 1 32 LYS n 1 33 VAL n 1 34 GLU n 1 35 VAL n 1 36 PRO n 1 37 VAL n 1 38 PHE n 1 39 THR n 1 40 LEU n 1 41 ASN n 1 42 SER n 1 43 ASP n 1 44 ASP n 1 45 PRO n 1 46 GLU n 1 47 ASP n 1 48 ARG n 1 49 TRP n 1 50 ASN n 1 51 PHE n 1 52 ALA n 1 53 VAL n 1 54 PHE n 1 55 CYS n 1 56 LEU n 1 57 ARG n 1 58 ILE n 1 59 ALA n 1 60 VAL n 1 61 SER n 1 62 GLU n 1 63 ASP n 1 64 ALA n 1 65 ASN n 1 66 LYS n 1 67 PRO n 1 68 LEU n 1 69 ARG n 1 70 GLN n 1 71 GLY n 1 72 ALA n 1 73 LEU n 1 74 ILE n 1 75 SER n 1 76 LEU n 1 77 LEU n 1 78 CYS n 1 79 SER n 1 80 HIS n 1 81 SER n 1 82 GLN n 1 83 VAL n 1 84 MET n 1 85 ARG n 1 86 ASN n 1 87 HIS n 1 88 VAL n 1 89 ALA n 1 90 LEU n 1 91 ALA n 1 92 GLY n 1 93 LYS n 1 94 GLN n 1 95 ASN n 1 96 GLU n 1 97 ALA n 1 98 THR n 1 99 LEU n 1 100 ALA n 1 101 VAL n 1 102 LEU n 1 103 GLU n 1 104 ILE n 1 105 ASP n 1 106 GLY n 1 107 PHE n 1 108 THR n 1 109 ASN n 1 110 GLY n 1 111 VAL n 1 112 PRO n 1 113 GLN n 1 114 PHE n 1 115 ASN n 1 116 ASN n 1 117 ARG n 1 118 SER n 1 119 GLY n 1 120 VAL n 1 121 SER n 1 122 GLU n 1 123 GLU n 1 124 ARG n 1 125 ALA n 1 126 GLN n 1 127 ARG n 1 128 PHE n 1 129 MET n 1 130 MET n 1 131 ILE n 1 132 ALA n 1 133 GLY n 1 134 SER n 1 135 LEU n 1 136 PRO n 1 137 ARG n 1 138 ALA n 1 139 CYS n 1 140 SER n 1 141 ASN n 1 142 GLY n 1 143 THR n 1 144 PRO n 1 145 PHE n 1 146 VAL n 1 147 THR n 1 148 ALA n 1 149 GLY n 1 150 VAL n 1 151 GLU n 1 152 ASP n 1 153 ASP n 1 154 ALA n 1 155 PRO n 1 156 GLU n 1 157 ASP n 1 158 ILE n 1 159 THR n 1 160 ASP n 1 161 THR n 1 162 LEU n 1 163 GLU n 1 164 ARG n 1 165 ILE n 1 166 LEU n 1 167 SER n 1 168 ILE n 1 169 GLN n 1 170 ALA n 1 171 GLN n 1 172 VAL n 1 173 TRP n 1 174 VAL n 1 175 THR n 1 176 VAL n 1 177 ALA n 1 178 LYS n 1 179 ALA n 1 180 MET n 1 181 THR n 1 182 ALA n 1 183 TYR n 1 184 GLU n 1 185 THR n 1 186 ALA n 1 187 ASP n 1 188 GLU n 1 189 SER n 1 190 GLU n 1 191 THR n 1 192 ARG n 1 193 ARG n 1 194 ILE n 1 195 ASN n 1 196 LYS n 1 197 TYR n 1 198 MET n 1 199 GLN n 1 200 GLN n 1 201 GLY n 1 202 ARG n 1 203 VAL n 1 204 GLN n 1 205 LYS n 1 206 LYS n 1 207 TYR n 1 208 ILE n 1 209 LEU n 1 210 HIS n 1 211 PRO n 1 212 VAL n 1 213 CYS n 1 214 ARG n 1 215 SER n 1 216 ALA n 1 217 ILE n 1 218 GLN n 1 219 LEU n 1 220 THR n 1 221 ILE n 1 222 ARG n 1 223 GLN n 1 224 SER n 1 225 LEU n 1 226 ALA n 1 227 VAL n 1 228 ARG n 1 229 ILE n 1 230 PHE n 1 231 LEU n 1 232 VAL n 1 233 SER n 1 234 GLU n 1 235 LEU n 1 236 LYS n 1 237 ARG n 1 238 GLY n 1 239 ARG n 1 240 ASN n 1 241 THR n 1 242 ALA n 1 243 GLY n 1 244 GLY n 1 245 THR n 1 246 SER n 1 247 THR n 1 248 TYR n 1 249 TYR n 1 250 ASN n 1 251 LEU n 1 252 VAL n 1 253 GLY n 1 254 ASP n 1 255 VAL n 1 256 ASP n 1 257 SER n 1 258 TYR n 1 259 ILE n 1 260 ARG n 1 261 ASN n 1 262 THR n 1 263 GLY n 1 264 LEU n 1 265 THR n 1 266 ALA n 1 267 PHE n 1 268 PHE n 1 269 LEU n 1 270 THR n 1 271 LEU n 1 272 LYS n 1 273 TYR n 1 274 GLY n 1 275 ILE n 1 276 ASN n 1 277 THR n 1 278 LYS n 1 279 THR n 1 280 SER n 1 281 ALA n 1 282 LEU n 1 283 ALA n 1 284 LEU n 1 285 SER n 1 286 SER n 1 287 LEU n 1 288 SER n 1 289 GLY n 1 290 ASP n 1 291 ILE n 1 292 GLN n 1 293 LYS n 1 294 MET n 1 295 LYS n 1 296 GLN n 1 297 LEU n 1 298 MET n 1 299 ARG n 1 300 LEU n 1 301 TYR n 1 302 ARG n 1 303 MET n 1 304 LYS n 1 305 GLY n 1 306 ASP n 1 307 ASN n 1 308 ALA n 1 309 PRO n 1 310 TYR n 1 311 MET n 1 312 THR n 1 313 LEU n 1 314 LEU n 1 315 GLY n 1 316 ASP n 1 317 SER n 1 318 ASP n 1 319 GLN n 1 320 MET n 1 321 SER n 1 322 PHE n 1 323 ALA n 1 324 PRO n 1 325 ALA n 1 326 GLU n 1 327 TYR n 1 328 ALA n 1 329 GLN n 1 330 LEU n 1 331 TYR n 1 332 SER n 1 333 PHE n 1 334 ALA n 1 335 MET n 1 336 GLY n 1 337 MET n 1 338 ALA n 1 339 SER n 1 340 VAL n 1 341 LEU n 1 342 ASP n 1 343 LYS n 1 344 GLY n 1 345 THR n 1 346 GLY n 1 347 LYS n 1 348 TYR n 1 349 GLN n 1 350 PHE n 1 351 ALA n 1 352 ARG n 1 353 ASP n 1 354 PHE n 1 355 MET n 1 356 SER n 1 357 THR n 1 358 SER n 1 359 PHE n 1 360 TRP n 1 361 ARG n 1 362 LEU n 1 363 GLY n 1 364 VAL n 1 365 GLU n 1 366 TYR n 1 367 ALA n 1 368 GLN n 1 369 ALA n 1 370 GLN n 1 371 GLY n 1 372 SER n 1 373 SER n 1 374 ILE n 1 375 ASN n 1 376 GLU n 1 377 ASP n 1 378 MET n 1 379 ALA n 1 380 ALA n 1 381 GLU n 1 382 LEU n 1 383 LYS n 1 384 LEU n 1 385 THR n 1 386 PRO n 1 387 ALA n 1 388 ALA n 1 389 ARG n 1 390 ARG n 1 391 GLY n 1 392 LEU n 1 393 ALA n 1 394 ALA n 1 395 ALA n 1 396 ALA n 1 397 GLN n 1 398 ARG n 2 1 U n 2 2 U n 2 3 U n 2 4 U n 2 5 U n 2 6 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 398 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP, N' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Avian avulavirus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11176 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'Escherichia coli' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 562 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ASN 19 19 ? ? ? A . n A 1 20 GLY 20 20 ? ? ? A . n A 1 21 ALA 21 21 ? ? ? A . n A 1 22 LEU 22 22 ? ? ? A . n A 1 23 GLY 23 23 ? ? ? A . n A 1 24 GLY 24 24 ? ? ? A . n A 1 25 GLY 25 25 ? ? ? A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 TRP 49 49 49 TRP TRP A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 CYS 55 55 55 CYS CYS A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 CYS 78 78 78 CYS CYS A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 MET 84 84 84 MET MET A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 MET 129 129 129 MET MET A . n A 1 130 MET 130 130 130 MET MET A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 SER 134 134 134 SER SER A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 CYS 139 139 139 CYS CYS A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 THR 161 161 161 THR THR A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 GLN 171 171 171 GLN GLN A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 TRP 173 173 173 TRP TRP A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 MET 180 180 180 MET MET A . n A 1 181 THR 181 181 181 THR THR A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 TYR 183 183 183 TYR TYR A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 THR 185 185 185 THR THR A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 ARG 192 192 192 ARG ARG A . n A 1 193 ARG 193 193 193 ARG ARG A . n A 1 194 ILE 194 194 194 ILE ILE A . n A 1 195 ASN 195 195 195 ASN ASN A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 TYR 197 197 197 TYR TYR A . n A 1 198 MET 198 198 198 MET MET A . n A 1 199 GLN 199 199 199 GLN GLN A . n A 1 200 GLN 200 200 200 GLN GLN A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 GLN 204 204 204 GLN GLN A . n A 1 205 LYS 205 205 205 LYS LYS A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 TYR 207 207 207 TYR TYR A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 LEU 209 209 209 LEU LEU A . n A 1 210 HIS 210 210 210 HIS HIS A . n A 1 211 PRO 211 211 211 PRO PRO A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 CYS 213 213 213 CYS CYS A . n A 1 214 ARG 214 214 214 ARG ARG A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 ILE 217 217 217 ILE ILE A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 ILE 221 221 221 ILE ILE A . n A 1 222 ARG 222 222 222 ARG ARG A . n A 1 223 GLN 223 223 223 GLN GLN A . n A 1 224 SER 224 224 224 SER SER A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 ALA 226 226 226 ALA ALA A . n A 1 227 VAL 227 227 227 VAL VAL A . n A 1 228 ARG 228 228 228 ARG ARG A . n A 1 229 ILE 229 229 229 ILE ILE A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 SER 233 233 233 SER SER A . n A 1 234 GLU 234 234 234 GLU GLU A . n A 1 235 LEU 235 235 235 LEU LEU A . n A 1 236 LYS 236 236 236 LYS LYS A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 GLY 238 238 238 GLY GLY A . n A 1 239 ARG 239 239 239 ARG ARG A . n A 1 240 ASN 240 240 240 ASN ASN A . n A 1 241 THR 241 241 241 THR THR A . n A 1 242 ALA 242 242 242 ALA ALA A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 GLY 244 244 244 GLY GLY A . n A 1 245 THR 245 245 245 THR THR A . n A 1 246 SER 246 246 246 SER SER A . n A 1 247 THR 247 247 247 THR THR A . n A 1 248 TYR 248 248 248 TYR TYR A . n A 1 249 TYR 249 249 249 TYR TYR A . n A 1 250 ASN 250 250 250 ASN ASN A . n A 1 251 LEU 251 251 251 LEU LEU A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 GLY 253 253 253 GLY GLY A . n A 1 254 ASP 254 254 254 ASP ASP A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 TYR 258 258 258 TYR TYR A . n A 1 259 ILE 259 259 259 ILE ILE A . n A 1 260 ARG 260 260 260 ARG ARG A . n A 1 261 ASN 261 261 261 ASN ASN A . n A 1 262 THR 262 262 262 THR THR A . n A 1 263 GLY 263 263 263 GLY GLY A . n A 1 264 LEU 264 264 264 LEU LEU A . n A 1 265 THR 265 265 265 THR THR A . n A 1 266 ALA 266 266 266 ALA ALA A . n A 1 267 PHE 267 267 267 PHE PHE A . n A 1 268 PHE 268 268 268 PHE PHE A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 THR 270 270 270 THR THR A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 LYS 272 272 272 LYS LYS A . n A 1 273 TYR 273 273 273 TYR TYR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 ASN 276 276 276 ASN ASN A . n A 1 277 THR 277 277 277 THR THR A . n A 1 278 LYS 278 278 278 LYS LYS A . n A 1 279 THR 279 279 279 THR THR A . n A 1 280 SER 280 280 280 SER SER A . n A 1 281 ALA 281 281 281 ALA ALA A . n A 1 282 LEU 282 282 282 LEU LEU A . n A 1 283 ALA 283 283 283 ALA ALA A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 SER 285 285 285 SER SER A . n A 1 286 SER 286 286 286 SER SER A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 SER 288 288 288 SER SER A . n A 1 289 GLY 289 289 289 GLY GLY A . n A 1 290 ASP 290 290 290 ASP ASP A . n A 1 291 ILE 291 291 291 ILE ILE A . n A 1 292 GLN 292 292 292 GLN GLN A . n A 1 293 LYS 293 293 293 LYS LYS A . n A 1 294 MET 294 294 294 MET MET A . n A 1 295 LYS 295 295 295 LYS LYS A . n A 1 296 GLN 296 296 296 GLN GLN A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 MET 298 298 298 MET MET A . n A 1 299 ARG 299 299 299 ARG ARG A . n A 1 300 LEU 300 300 300 LEU LEU A . n A 1 301 TYR 301 301 301 TYR TYR A . n A 1 302 ARG 302 302 302 ARG ARG A . n A 1 303 MET 303 303 303 MET MET A . n A 1 304 LYS 304 304 304 LYS LYS A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 ASP 306 306 306 ASP ASP A . n A 1 307 ASN 307 307 307 ASN ASN A . n A 1 308 ALA 308 308 308 ALA ALA A . n A 1 309 PRO 309 309 309 PRO PRO A . n A 1 310 TYR 310 310 310 TYR TYR A . n A 1 311 MET 311 311 311 MET MET A . n A 1 312 THR 312 312 312 THR THR A . n A 1 313 LEU 313 313 313 LEU LEU A . n A 1 314 LEU 314 314 314 LEU LEU A . n A 1 315 GLY 315 315 315 GLY GLY A . n A 1 316 ASP 316 316 316 ASP ASP A . n A 1 317 SER 317 317 317 SER SER A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 GLN 319 319 319 GLN GLN A . n A 1 320 MET 320 320 320 MET MET A . n A 1 321 SER 321 321 321 SER SER A . n A 1 322 PHE 322 322 322 PHE PHE A . n A 1 323 ALA 323 323 323 ALA ALA A . n A 1 324 PRO 324 324 324 PRO PRO A . n A 1 325 ALA 325 325 325 ALA ALA A . n A 1 326 GLU 326 326 326 GLU GLU A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ALA 328 328 328 ALA ALA A . n A 1 329 GLN 329 329 329 GLN GLN A . n A 1 330 LEU 330 330 330 LEU LEU A . n A 1 331 TYR 331 331 331 TYR TYR A . n A 1 332 SER 332 332 332 SER SER A . n A 1 333 PHE 333 333 333 PHE PHE A . n A 1 334 ALA 334 334 334 ALA ALA A . n A 1 335 MET 335 335 335 MET MET A . n A 1 336 GLY 336 336 336 GLY GLY A . n A 1 337 MET 337 337 337 MET MET A . n A 1 338 ALA 338 338 338 ALA ALA A . n A 1 339 SER 339 339 339 SER SER A . n A 1 340 VAL 340 340 340 VAL VAL A . n A 1 341 LEU 341 341 341 LEU LEU A . n A 1 342 ASP 342 342 342 ASP ASP A . n A 1 343 LYS 343 343 343 LYS LYS A . n A 1 344 GLY 344 344 344 GLY GLY A . n A 1 345 THR 345 345 345 THR THR A . n A 1 346 GLY 346 346 346 GLY GLY A . n A 1 347 LYS 347 347 347 LYS LYS A . n A 1 348 TYR 348 348 348 TYR TYR A . n A 1 349 GLN 349 349 349 GLN GLN A . n A 1 350 PHE 350 350 350 PHE PHE A . n A 1 351 ALA 351 351 351 ALA ALA A . n A 1 352 ARG 352 352 352 ARG ARG A . n A 1 353 ASP 353 353 353 ASP ASP A . n A 1 354 PHE 354 354 354 PHE PHE A . n A 1 355 MET 355 355 355 MET MET A . n A 1 356 SER 356 356 356 SER SER A . n A 1 357 THR 357 357 357 THR THR A . n A 1 358 SER 358 358 358 SER SER A . n A 1 359 PHE 359 359 359 PHE PHE A . n A 1 360 TRP 360 360 360 TRP TRP A . n A 1 361 ARG 361 361 361 ARG ARG A . n A 1 362 LEU 362 362 362 LEU LEU A . n A 1 363 GLY 363 363 363 GLY GLY A . n A 1 364 VAL 364 364 364 VAL VAL A . n A 1 365 GLU 365 365 365 GLU GLU A . n A 1 366 TYR 366 366 366 TYR TYR A . n A 1 367 ALA 367 367 367 ALA ALA A . n A 1 368 GLN 368 368 368 GLN GLN A . n A 1 369 ALA 369 369 369 ALA ALA A . n A 1 370 GLN 370 370 370 GLN GLN A . n A 1 371 GLY 371 371 371 GLY GLY A . n A 1 372 SER 372 372 372 SER SER A . n A 1 373 SER 373 373 373 SER SER A . n A 1 374 ILE 374 374 374 ILE ILE A . n A 1 375 ASN 375 375 375 ASN ASN A . n A 1 376 GLU 376 376 376 GLU GLU A . n A 1 377 ASP 377 377 377 ASP ASP A . n A 1 378 MET 378 378 378 MET MET A . n A 1 379 ALA 379 379 379 ALA ALA A . n A 1 380 ALA 380 380 380 ALA ALA A . n A 1 381 GLU 381 381 381 GLU GLU A . n A 1 382 LEU 382 382 382 LEU LEU A . n A 1 383 LYS 383 383 383 LYS LYS A . n A 1 384 LEU 384 384 384 LEU LEU A . n A 1 385 THR 385 385 385 THR THR A . n A 1 386 PRO 386 386 386 PRO PRO A . n A 1 387 ALA 387 387 387 ALA ALA A . n A 1 388 ALA 388 388 388 ALA ALA A . n A 1 389 ARG 389 389 389 ARG ARG A . n A 1 390 ARG 390 390 390 ARG ARG A . n A 1 391 GLY 391 391 391 GLY GLY A . n A 1 392 LEU 392 392 392 LEU LEU A . n A 1 393 ALA 393 393 393 ALA ALA A . n A 1 394 ALA 394 394 394 ALA ALA A . n A 1 395 ALA 395 395 395 ALA ALA A . n A 1 396 ALA 396 396 396 ALA ALA A . n A 1 397 GLN 397 397 397 GLN GLN A . n A 1 398 ARG 398 398 398 ARG ARG A . n B 2 1 U 1 34 34 U U N . n B 2 2 U 2 35 35 U U N . n B 2 3 U 3 36 36 U U N . n B 2 4 U 4 37 37 U U N . n B 2 5 U 5 38 38 U U N . n B 2 6 U 6 39 39 U U N . n # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 90 _cell.angle_gamma_esd ? _cell.entry_id 6JC3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1 _cell.length_a_esd ? _cell.length_b 1 _cell.length_b_esd ? _cell.length_c 1 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JC3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6JC3 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6JC3 _struct.title 'The Cryo-EM structure of nucleoprotein-RNA complex of Newcastle disease virus' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6JC3 _struct_keywords.text 'self-capping helical structure complex, NUCLEAR PROTEIN, NUCLEAR PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'NUCLEAR PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP D6R3F6_9MONO D6R3F6 ? 1 ;MSSVFDEYEQLLAAQTRPNGALGGGEKGSTLKVEVPVFTLNSDDPEDRWNFAVFCLRIAVSEDANKPLRQGALISLLCSH SQVMRNHVALAGKQNEATLAVLEIDGFTNGVPQFNNRSGVSEERAQRFMMIAGSLPRACSNGTPFVTAGVEDDAPEDITD TLERILSIQAQVWVTVAKAMTAYETADESETRRINKYMQQGRVQKKYILHPVCRSAIQLTIRQSLAVRIFLVSELKRGRN TAGGTSTYYNLVGDVDSYIRNTGLTAFFLTLKYGINTKTSALALSSLSGDIQKMKQLMRLYRMKGDNAPYMTLLGDSDQM SFAPAEYAQLYSFAMGMASVLDKGTGKYQFARDFMSTSFWRLGVEYAQAQGSSINEDMAAELKLTPAARRGLAAAAQR ; 1 2 PDB 6JC3 6JC3 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6JC3 A 1 ? 398 ? D6R3F6 1 ? 398 ? 1 398 2 2 6JC3 N 1 ? 6 ? 6JC3 34 ? 39 ? 34 39 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1380 ? 1 MORE -15 ? 1 'SSA (A^2)' 24060 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'assay for oligomerization' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 3 ? GLN A 15 ? SER A 3 GLN A 15 1 ? 13 HELX_P HELX_P2 AA2 ASP A 44 ? VAL A 60 ? ASP A 44 VAL A 60 1 ? 17 HELX_P HELX_P3 AA3 ASN A 65 ? SER A 79 ? ASN A 65 SER A 79 1 ? 15 HELX_P HELX_P4 AA4 MET A 84 ? LYS A 93 ? MET A 84 LYS A 93 1 ? 10 HELX_P HELX_P5 AA5 GLU A 123 ? GLY A 133 ? GLU A 123 GLY A 133 1 ? 11 HELX_P HELX_P6 AA6 THR A 147 ? GLU A 151 ? THR A 147 GLU A 151 5 ? 5 HELX_P HELX_P7 AA7 ASP A 157 ? THR A 175 ? ASP A 157 THR A 175 1 ? 19 HELX_P HELX_P8 AA8 ALA A 186 ? GLY A 201 ? ALA A 186 GLY A 201 1 ? 16 HELX_P HELX_P9 AA9 GLN A 204 ? ILE A 208 ? GLN A 204 ILE A 208 5 ? 5 HELX_P HELX_P10 AB1 HIS A 210 ? SER A 224 ? HIS A 210 SER A 224 1 ? 15 HELX_P HELX_P11 AB2 SER A 224 ? THR A 241 ? SER A 224 THR A 241 1 ? 18 HELX_P HELX_P12 AB3 SER A 246 ? ARG A 260 ? SER A 246 ARG A 260 1 ? 15 HELX_P HELX_P13 AB4 LEU A 264 ? TYR A 273 ? LEU A 264 TYR A 273 1 ? 10 HELX_P HELX_P14 AB5 THR A 279 ? ALA A 283 ? THR A 279 ALA A 283 5 ? 5 HELX_P HELX_P15 AB6 LEU A 287 ? MET A 303 ? LEU A 287 MET A 303 1 ? 17 HELX_P HELX_P16 AB7 ASN A 307 ? PRO A 309 ? ASN A 307 PRO A 309 5 ? 3 HELX_P HELX_P17 AB8 TYR A 310 ? GLY A 315 ? TYR A 310 GLY A 315 1 ? 6 HELX_P HELX_P18 AB9 ASP A 316 ? ALA A 323 ? ASP A 316 ALA A 323 5 ? 8 HELX_P HELX_P19 AC1 PRO A 324 ? GLU A 326 ? PRO A 324 GLU A 326 5 ? 3 HELX_P HELX_P20 AC2 TYR A 327 ? ASP A 342 ? TYR A 327 ASP A 342 1 ? 16 HELX_P HELX_P21 AC3 SER A 356 ? ALA A 369 ? SER A 356 ALA A 369 1 ? 14 HELX_P HELX_P22 AC4 ASN A 375 ? LYS A 383 ? ASN A 375 LYS A 383 1 ? 9 HELX_P HELX_P23 AC5 THR A 385 ? GLN A 397 ? THR A 385 GLN A 397 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CD2 A LEU 314 ? ? OD1 A ASP 316 ? ? 1.51 2 1 NE2 A GLN 319 ? ? N A MET 320 ? ? 1.63 3 1 CE2 A PHE 107 ? ? CA A PHE 114 ? ? 1.90 4 1 O A PHE 128 ? ? N A ALA 132 ? ? 1.92 5 1 O A ASP 318 ? ? OG A SER 321 ? ? 2.00 6 1 CG A MET 180 ? ? OE2 A GLU 184 ? ? 2.00 7 1 O A GLN 319 ? ? N A PHE 322 ? ? 2.00 8 1 O A SER 286 ? ? N A SER 288 ? ? 2.01 9 1 CG A PHE 107 ? ? O A GLN 113 ? ? 2.06 10 1 O A GLY 336 ? ? OG A SER 339 ? ? 2.09 11 1 CZ A PHE 107 ? ? CB A PHE 114 ? ? 2.13 12 1 CZ A PHE 107 ? ? CA A PHE 114 ? ? 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N3 _pdbx_validate_rmsd_angle.auth_asym_id_1 N _pdbx_validate_rmsd_angle.auth_comp_id_1 U _pdbx_validate_rmsd_angle.auth_seq_id_1 37 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C2 _pdbx_validate_rmsd_angle.auth_asym_id_2 N _pdbx_validate_rmsd_angle.auth_comp_id_2 U _pdbx_validate_rmsd_angle.auth_seq_id_2 37 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 O2 _pdbx_validate_rmsd_angle.auth_asym_id_3 N _pdbx_validate_rmsd_angle.auth_comp_id_3 U _pdbx_validate_rmsd_angle.auth_seq_id_3 37 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.51 _pdbx_validate_rmsd_angle.angle_target_value 122.20 _pdbx_validate_rmsd_angle.angle_deviation -4.69 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 82 ? ? -90.29 -79.90 2 1 ALA A 97 ? ? -93.12 -159.51 3 1 VAL A 101 ? ? -96.37 -60.08 4 1 GLU A 103 ? ? -60.81 93.56 5 1 ASP A 105 ? ? 51.36 8.85 6 1 ASN A 141 ? ? 57.47 -2.47 7 1 ASP A 152 ? ? -82.51 45.74 8 1 ALA A 242 ? ? -76.73 -159.53 9 1 THR A 245 ? ? -164.52 -154.28 10 1 LEU A 264 ? ? -93.51 30.62 11 1 LEU A 287 ? ? -39.17 -10.75 12 1 LYS A 304 ? ? -69.49 -73.98 13 1 PRO A 309 ? ? -65.55 10.07 14 1 MET A 320 ? ? -37.91 -32.38 15 1 PHE A 322 ? ? -78.63 39.35 16 1 GLN A 329 ? ? -65.36 -70.86 17 1 LYS A 343 ? ? -105.59 67.61 18 1 PHE A 350 ? ? -111.88 74.72 19 1 ALA A 369 ? ? -118.09 78.77 20 1 GLN A 370 ? ? -74.96 27.07 21 1 SER A 373 ? ? -60.52 88.44 22 1 GLN A 397 ? ? -67.71 6.05 # _em_3d_fitting.entry_id 6JC3 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6JC3 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 75290 _em_3d_reconstruction.resolution 4.8 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.0 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'Ternary complex of nucleoprotein-RNA of Newcastle disease virus' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list '1, 2' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 6JC3 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.details 'GLOW DISCHARGED' _em_sample_support.specimen_id 1 _em_sample_support.grid_type ? _em_sample_support.method ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 6JC3 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6JC3 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 19 ? A ASN 19 2 1 Y 1 A GLY 20 ? A GLY 20 3 1 Y 1 A ALA 21 ? A ALA 21 4 1 Y 1 A LEU 22 ? A LEU 22 5 1 Y 1 A GLY 23 ? A GLY 23 6 1 Y 1 A GLY 24 ? A GLY 24 7 1 Y 1 A GLY 25 ? A GLY 25 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 U OP3 O N N 369 U P P N N 370 U OP1 O N N 371 U OP2 O N N 372 U "O5'" O N N 373 U "C5'" C N N 374 U "C4'" C N R 375 U "O4'" O N N 376 U "C3'" C N S 377 U "O3'" O N N 378 U "C2'" C N R 379 U "O2'" O N N 380 U "C1'" C N R 381 U N1 N N N 382 U C2 C N N 383 U O2 O N N 384 U N3 N N N 385 U C4 C N N 386 U O4 O N N 387 U C5 C N N 388 U C6 C N N 389 U HOP3 H N N 390 U HOP2 H N N 391 U "H5'" H N N 392 U "H5''" H N N 393 U "H4'" H N N 394 U "H3'" H N N 395 U "HO3'" H N N 396 U "H2'" H N N 397 U "HO2'" H N N 398 U "H1'" H N N 399 U H3 H N N 400 U H5 H N N 401 U H6 H N N 402 VAL N N N N 403 VAL CA C N S 404 VAL C C N N 405 VAL O O N N 406 VAL CB C N N 407 VAL CG1 C N N 408 VAL CG2 C N N 409 VAL OXT O N N 410 VAL H H N N 411 VAL H2 H N N 412 VAL HA H N N 413 VAL HB H N N 414 VAL HG11 H N N 415 VAL HG12 H N N 416 VAL HG13 H N N 417 VAL HG21 H N N 418 VAL HG22 H N N 419 VAL HG23 H N N 420 VAL HXT H N N 421 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 U OP3 P sing N N 356 U OP3 HOP3 sing N N 357 U P OP1 doub N N 358 U P OP2 sing N N 359 U P "O5'" sing N N 360 U OP2 HOP2 sing N N 361 U "O5'" "C5'" sing N N 362 U "C5'" "C4'" sing N N 363 U "C5'" "H5'" sing N N 364 U "C5'" "H5''" sing N N 365 U "C4'" "O4'" sing N N 366 U "C4'" "C3'" sing N N 367 U "C4'" "H4'" sing N N 368 U "O4'" "C1'" sing N N 369 U "C3'" "O3'" sing N N 370 U "C3'" "C2'" sing N N 371 U "C3'" "H3'" sing N N 372 U "O3'" "HO3'" sing N N 373 U "C2'" "O2'" sing N N 374 U "C2'" "C1'" sing N N 375 U "C2'" "H2'" sing N N 376 U "O2'" "HO2'" sing N N 377 U "C1'" N1 sing N N 378 U "C1'" "H1'" sing N N 379 U N1 C2 sing N N 380 U N1 C6 sing N N 381 U C2 O2 doub N N 382 U C2 N3 sing N N 383 U N3 C4 sing N N 384 U N3 H3 sing N N 385 U C4 O4 doub N N 386 U C4 C5 sing N N 387 U C5 C6 doub N N 388 U C5 H5 sing N N 389 U C6 H6 sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 11176 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Newcastle disease virus' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 41 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? SerialEM 3-6-11 ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? CTFFIND 3 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? RELION 2.0 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _atom_sites.entry_id 6JC3 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_