data_6JDB # _entry.id 6JDB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6JDB pdb_00006jdb 10.2210/pdb6jdb/pdb WWPDB D_1300010716 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6JDB _pdbx_database_status.recvd_initial_deposition_date 2019-02-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Thanuja, G.' 1 0000-0002-3162-8138 'Ramaswamy, S.' 2 0000-0002-6709-190X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Omega' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2470-1343 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 5 _citation.language ? _citation.page_first 30923 _citation.page_last 30926 _citation.title 'Structure and Function of N‐Acetylmannosamine Kinases from Pathogenic Bacteria.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acsomega.0c03699 _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thanuja, G.' 1 0000-0002-3162-8138 primary 'Ramaswamy, S.' 2 0000-0002-6709-190X # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6JDB _cell.details ? _cell.formula_units_Z ? _cell.length_a 92.591 _cell.length_a_esd ? _cell.length_b 92.591 _cell.length_b_esd ? _cell.length_c 183.321 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JDB _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'N-acetylmannosamine kinase' 30976.268 1 2.7.1.60 ? ? ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose 301.188 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 water nat water 18.015 12 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ManNAc kinase,N-acetyl-D-mannosamine kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRCLALDIGGTKIAAAIVKNEIEQRQQIHTPRENVVEGMHQALGKLLADYEGQFDYVAVASTGIINNGILSALNPKNLGG LAEFPLKASIAKHTDKPIGLLNDAQAATYAEYQLQNFEQVSNFVFITVSTGVGGGIVLNQILQTGSRGIAGHIGHTLADP NGAICGCGRRGCVEAIASGRAIEAVSSQWEDPCDPKEVFERFRKNDEKATALVERSAKAIANLIADLVISLDIQKIAIGG SVGLAEGYLSLVEKYLQDFPSIYCCEIETAKFGQDAGLIGAAYWVKDVLL ; _entity_poly.pdbx_seq_one_letter_code_can ;MRCLALDIGGTKIAAAIVKNEIEQRQQIHTPRENVVEGMHQALGKLLADYEGQFDYVAVASTGIINNGILSALNPKNLGG LAEFPLKASIAKHTDKPIGLLNDAQAATYAEYQLQNFEQVSNFVFITVSTGVGGGIVLNQILQTGSRGIAGHIGHTLADP NGAICGCGRRGCVEAIASGRAIEAVSSQWEDPCDPKEVFERFRKNDEKATALVERSAKAIANLIADLVISLDIQKIAIGG SVGLAEGYLSLVEKYLQDFPSIYCCEIETAKFGQDAGLIGAAYWVKDVLL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 CYS n 1 4 LEU n 1 5 ALA n 1 6 LEU n 1 7 ASP n 1 8 ILE n 1 9 GLY n 1 10 GLY n 1 11 THR n 1 12 LYS n 1 13 ILE n 1 14 ALA n 1 15 ALA n 1 16 ALA n 1 17 ILE n 1 18 VAL n 1 19 LYS n 1 20 ASN n 1 21 GLU n 1 22 ILE n 1 23 GLU n 1 24 GLN n 1 25 ARG n 1 26 GLN n 1 27 GLN n 1 28 ILE n 1 29 HIS n 1 30 THR n 1 31 PRO n 1 32 ARG n 1 33 GLU n 1 34 ASN n 1 35 VAL n 1 36 VAL n 1 37 GLU n 1 38 GLY n 1 39 MET n 1 40 HIS n 1 41 GLN n 1 42 ALA n 1 43 LEU n 1 44 GLY n 1 45 LYS n 1 46 LEU n 1 47 LEU n 1 48 ALA n 1 49 ASP n 1 50 TYR n 1 51 GLU n 1 52 GLY n 1 53 GLN n 1 54 PHE n 1 55 ASP n 1 56 TYR n 1 57 VAL n 1 58 ALA n 1 59 VAL n 1 60 ALA n 1 61 SER n 1 62 THR n 1 63 GLY n 1 64 ILE n 1 65 ILE n 1 66 ASN n 1 67 ASN n 1 68 GLY n 1 69 ILE n 1 70 LEU n 1 71 SER n 1 72 ALA n 1 73 LEU n 1 74 ASN n 1 75 PRO n 1 76 LYS n 1 77 ASN n 1 78 LEU n 1 79 GLY n 1 80 GLY n 1 81 LEU n 1 82 ALA n 1 83 GLU n 1 84 PHE n 1 85 PRO n 1 86 LEU n 1 87 LYS n 1 88 ALA n 1 89 SER n 1 90 ILE n 1 91 ALA n 1 92 LYS n 1 93 HIS n 1 94 THR n 1 95 ASP n 1 96 LYS n 1 97 PRO n 1 98 ILE n 1 99 GLY n 1 100 LEU n 1 101 LEU n 1 102 ASN n 1 103 ASP n 1 104 ALA n 1 105 GLN n 1 106 ALA n 1 107 ALA n 1 108 THR n 1 109 TYR n 1 110 ALA n 1 111 GLU n 1 112 TYR n 1 113 GLN n 1 114 LEU n 1 115 GLN n 1 116 ASN n 1 117 PHE n 1 118 GLU n 1 119 GLN n 1 120 VAL n 1 121 SER n 1 122 ASN n 1 123 PHE n 1 124 VAL n 1 125 PHE n 1 126 ILE n 1 127 THR n 1 128 VAL n 1 129 SER n 1 130 THR n 1 131 GLY n 1 132 VAL n 1 133 GLY n 1 134 GLY n 1 135 GLY n 1 136 ILE n 1 137 VAL n 1 138 LEU n 1 139 ASN n 1 140 GLN n 1 141 ILE n 1 142 LEU n 1 143 GLN n 1 144 THR n 1 145 GLY n 1 146 SER n 1 147 ARG n 1 148 GLY n 1 149 ILE n 1 150 ALA n 1 151 GLY n 1 152 HIS n 1 153 ILE n 1 154 GLY n 1 155 HIS n 1 156 THR n 1 157 LEU n 1 158 ALA n 1 159 ASP n 1 160 PRO n 1 161 ASN n 1 162 GLY n 1 163 ALA n 1 164 ILE n 1 165 CYS n 1 166 GLY n 1 167 CYS n 1 168 GLY n 1 169 ARG n 1 170 ARG n 1 171 GLY n 1 172 CYS n 1 173 VAL n 1 174 GLU n 1 175 ALA n 1 176 ILE n 1 177 ALA n 1 178 SER n 1 179 GLY n 1 180 ARG n 1 181 ALA n 1 182 ILE n 1 183 GLU n 1 184 ALA n 1 185 VAL n 1 186 SER n 1 187 SER n 1 188 GLN n 1 189 TRP n 1 190 GLU n 1 191 ASP n 1 192 PRO n 1 193 CYS n 1 194 ASP n 1 195 PRO n 1 196 LYS n 1 197 GLU n 1 198 VAL n 1 199 PHE n 1 200 GLU n 1 201 ARG n 1 202 PHE n 1 203 ARG n 1 204 LYS n 1 205 ASN n 1 206 ASP n 1 207 GLU n 1 208 LYS n 1 209 ALA n 1 210 THR n 1 211 ALA n 1 212 LEU n 1 213 VAL n 1 214 GLU n 1 215 ARG n 1 216 SER n 1 217 ALA n 1 218 LYS n 1 219 ALA n 1 220 ILE n 1 221 ALA n 1 222 ASN n 1 223 LEU n 1 224 ILE n 1 225 ALA n 1 226 ASP n 1 227 LEU n 1 228 VAL n 1 229 ILE n 1 230 SER n 1 231 LEU n 1 232 ASP n 1 233 ILE n 1 234 GLN n 1 235 LYS n 1 236 ILE n 1 237 ALA n 1 238 ILE n 1 239 GLY n 1 240 GLY n 1 241 SER n 1 242 VAL n 1 243 GLY n 1 244 LEU n 1 245 ALA n 1 246 GLU n 1 247 GLY n 1 248 TYR n 1 249 LEU n 1 250 SER n 1 251 LEU n 1 252 VAL n 1 253 GLU n 1 254 LYS n 1 255 TYR n 1 256 LEU n 1 257 GLN n 1 258 ASP n 1 259 PHE n 1 260 PRO n 1 261 SER n 1 262 ILE n 1 263 TYR n 1 264 CYS n 1 265 CYS n 1 266 GLU n 1 267 ILE n 1 268 GLU n 1 269 THR n 1 270 ALA n 1 271 LYS n 1 272 PHE n 1 273 GLY n 1 274 GLN n 1 275 ASP n 1 276 ALA n 1 277 GLY n 1 278 LEU n 1 279 ILE n 1 280 GLY n 1 281 ALA n 1 282 ALA n 1 283 TYR n 1 284 TRP n 1 285 VAL n 1 286 LYS n 1 287 ASP n 1 288 VAL n 1 289 LEU n 1 290 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 290 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene nanK _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 86-028NP _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus influenzae 86-028NP' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 281310 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NANK_HAEI8 _struct_ref.pdbx_db_accession Q4QP43 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRCLALDIGGTKIAAAIVKNGEIEQRQQIHTPRENVVEGMHQALGKLLADYEGQFDYVAVASTGIINNGILSALNPKNLG GLAEFPLKASIAKHTDKPIGLLNDAQAATYAEYQLQNFEQVSNFVFITVSTGVGGGIVLNQILQTGSRGIAGHIGHTLAD PNGAICGCGRRGCVEAIASGRAIEAVSSQWEDPCDPKEVFERFRKNDEKATALVERSAKAIANLIADLVISLDIQKIAIG GSVGLAEGYLSLVEKYLQDFPSIYCCEIETAKFGQDAGLIGAAYWVKDVLL ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6JDB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 290 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q4QP43 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 291 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 291 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6JDB _struct_ref_seq_dif.mon_id ? _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num ? _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q4QP43 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 21 _struct_ref_seq_dif.details deletion _struct_ref_seq_dif.pdbx_auth_seq_num ? _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMX 'D-saccharide, alpha linking' n 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose ;2-(ACETYLAMINO)-2-DEOXY-6-O-PHOSPHONO-ALPHA-D-MANNOPYRANOSE; N-acetyl-6-O-phosphono-alpha-D-mannosamine; 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannose; 2-acetamido-2-deoxy-6-O-phosphono-D-mannose; 2-acetamido-2-deoxy-6-O-phosphono-mannose ; 'C8 H16 N O9 P' 301.188 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6JDB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.2M Ammonium phosphate monobasic, 0.1M Tris pH 8.5, 50% v/v MPD ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-09-29 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list '0.97857 A' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6JDB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.640 _reflns.d_resolution_low 46.300 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12021 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.600 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.900 _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.104 _reflns.pdbx_Rpim_I_all 0.043 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.640 2.770 ? ? ? ? ? ? 1528 98.000 ? ? ? ? 0.947 ? ? ? ? ? ? ? ? 6.200 ? ? ? ? 1.035 0.412 ? 1 1 0.828 ? 8.770 46.300 ? ? ? ? ? ? 386 98.300 ? ? ? ? 0.032 ? ? ? ? ? ? ? ? 4.800 ? ? ? ? 0.037 0.017 ? 2 1 0.999 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 112.790 _refine.B_iso_mean 64.7796 _refine.B_iso_min 34.820 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'SF FILE CONTAINS FRIEDEL PAIRS UNDER I/F_MINUS AND I/F_PLUS COLUMNS.' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6JDB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.6500 _refine.ls_d_res_low 29.2800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11928 _refine.ls_number_reflns_R_free 572 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.5600 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2165 _refine.ls_R_factor_R_free 0.2756 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2135 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6JDA _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.9000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.6500 _refine_hist.d_res_low 29.2800 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 2234 _refine_hist.pdbx_number_residues_total 290 _refine_hist.pdbx_B_iso_mean_ligand 69.93 _refine_hist.pdbx_B_iso_mean_solvent 57.78 _refine_hist.pdbx_number_atoms_protein 2175 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.6501 2.9165 2913 . 139 2774 99.0000 . . . 0.4075 0.0000 0.3035 . . . . . . 4 . . . 'X-RAY DIFFRACTION' 2.9165 3.3381 2939 . 150 2789 100.0000 . . . 0.3032 0.0000 0.2606 . . . . . . 4 . . . 'X-RAY DIFFRACTION' 3.3381 4.2036 2971 . 133 2838 100.0000 . . . 0.2916 0.0000 0.2137 . . . . . . 4 . . . 'X-RAY DIFFRACTION' 4.2036 29.2816 3105 . 150 2955 99.0000 . . . 0.2384 0.0000 0.1845 . . . . . . 4 . . . # _struct.entry_id 6JDB _struct.title 'Crystal structure of N-acetyl mannosmaine kinase in complex with ManNAc-6P and ADP from Haemophilus influenzae' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6JDB _struct_keywords.text 'Kinase, ManNAc binding protein, two domain protein, phosphorylation, SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 34 ? ASP A 49 ? ASN A 35 ASP A 50 1 ? 16 HELX_P HELX_P2 AA2 ASN A 74 ? GLY A 79 ? ASN A 75 GLY A 80 5 ? 6 HELX_P HELX_P3 AA3 LEU A 86 ? LYS A 92 ? LEU A 87 LYS A 93 1 ? 7 HELX_P HELX_P4 AA4 ASP A 103 ? GLN A 113 ? ASP A 104 GLN A 114 1 ? 11 HELX_P HELX_P5 AA5 HIS A 152 ? THR A 156 ? HIS A 153 THR A 157 5 ? 5 HELX_P HELX_P6 AA6 VAL A 173 ? SER A 178 ? VAL A 174 SER A 179 1 ? 6 HELX_P HELX_P7 AA7 SER A 178 ? SER A 187 ? SER A 179 SER A 188 1 ? 10 HELX_P HELX_P8 AA8 ASP A 194 ? LYS A 204 ? ASP A 195 LYS A 205 1 ? 11 HELX_P HELX_P9 AA9 ASP A 206 ? ASP A 232 ? ASP A 207 ASP A 233 1 ? 27 HELX_P HELX_P10 AB1 GLY A 247 ? GLN A 257 ? GLY A 248 GLN A 258 1 ? 11 HELX_P HELX_P11 AB2 ASP A 258 ? PHE A 259 ? ASP A 259 PHE A 260 5 ? 2 HELX_P HELX_P12 AB3 PRO A 260 ? CYS A 264 ? PRO A 261 CYS A 265 5 ? 5 HELX_P HELX_P13 AB4 PHE A 272 ? GLN A 274 ? PHE A 273 GLN A 275 5 ? 3 HELX_P HELX_P14 AB5 ASP A 275 ? VAL A 288 ? ASP A 276 VAL A 289 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 155 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 156 A ZN 303 1_555 ? ? ? ? ? ? ? 2.010 ? ? metalc2 metalc ? ? A CYS 165 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 166 A ZN 303 1_555 ? ? ? ? ? ? ? 2.403 ? ? metalc3 metalc ? ? A CYS 167 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 168 A ZN 303 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc4 metalc ? ? A CYS 172 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 173 A ZN 303 1_555 ? ? ? ? ? ? ? 2.509 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? parallel AA3 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 22 ? HIS A 29 ? ILE A 23 HIS A 30 AA1 2 LYS A 12 ? VAL A 18 ? LYS A 12 VAL A 18 AA1 3 CYS A 3 ? ILE A 8 ? CYS A 3 ILE A 8 AA1 4 TYR A 56 ? SER A 61 ? TYR A 57 SER A 62 AA1 5 ILE A 98 ? ASN A 102 ? ILE A 99 ASN A 103 AA2 1 ILE A 64 ? ASN A 66 ? ILE A 65 ASN A 67 AA2 2 ILE A 69 ? SER A 71 ? ILE A 70 SER A 72 AA2 3 GLU A 83 ? PRO A 85 ? GLU A 84 PRO A 86 AA3 1 ILE A 141 ? GLN A 143 ? ILE A 142 GLN A 144 AA3 2 VAL A 132 ? LEU A 138 ? VAL A 133 LEU A 139 AA3 3 ASN A 122 ? VAL A 128 ? ASN A 123 VAL A 129 AA3 4 LYS A 235 ? GLY A 239 ? LYS A 236 GLY A 240 AA3 5 GLU A 266 ? THR A 269 ? GLU A 267 THR A 270 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLN A 26 ? O GLN A 27 N ALA A 15 ? N ALA A 15 AA1 2 3 O ALA A 16 ? O ALA A 16 N ALA A 5 ? N ALA A 5 AA1 3 4 N LEU A 6 ? N LEU A 6 O ALA A 60 ? O ALA A 61 AA1 4 5 N VAL A 57 ? N VAL A 58 O GLY A 99 ? O GLY A 100 AA2 1 2 N ILE A 64 ? N ILE A 65 O SER A 71 ? O SER A 72 AA2 2 3 N LEU A 70 ? N LEU A 71 O PHE A 84 ? O PHE A 85 AA3 1 2 O GLN A 143 ? O GLN A 144 N ILE A 136 ? N ILE A 137 AA3 2 3 O VAL A 137 ? O VAL A 138 N PHE A 123 ? N PHE A 124 AA3 3 4 N ILE A 126 ? N ILE A 127 O ALA A 237 ? O ALA A 238 AA3 4 5 N ILE A 236 ? N ILE A 237 O GLU A 266 ? O GLU A 267 # _atom_sites.entry_id 6JDB _atom_sites.fract_transf_matrix[1][1] 0.010800 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010800 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005455 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 GLU 21 22 22 GLU GLU A . n A 1 22 ILE 22 23 23 ILE ILE A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 GLN 24 25 25 GLN GLN A . n A 1 25 ARG 25 26 26 ARG ARG A . n A 1 26 GLN 26 27 27 GLN GLN A . n A 1 27 GLN 27 28 28 GLN GLN A . n A 1 28 ILE 28 29 29 ILE ILE A . n A 1 29 HIS 29 30 30 HIS HIS A . n A 1 30 THR 30 31 31 THR THR A . n A 1 31 PRO 31 32 32 PRO PRO A . n A 1 32 ARG 32 33 33 ARG ARG A . n A 1 33 GLU 33 34 34 GLU GLU A . n A 1 34 ASN 34 35 35 ASN ASN A . n A 1 35 VAL 35 36 36 VAL VAL A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 GLU 37 38 38 GLU GLU A . n A 1 38 GLY 38 39 39 GLY GLY A . n A 1 39 MET 39 40 40 MET MET A . n A 1 40 HIS 40 41 41 HIS HIS A . n A 1 41 GLN 41 42 42 GLN GLN A . n A 1 42 ALA 42 43 43 ALA ALA A . n A 1 43 LEU 43 44 44 LEU LEU A . n A 1 44 GLY 44 45 45 GLY GLY A . n A 1 45 LYS 45 46 46 LYS LYS A . n A 1 46 LEU 46 47 47 LEU LEU A . n A 1 47 LEU 47 48 48 LEU LEU A . n A 1 48 ALA 48 49 49 ALA ALA A . n A 1 49 ASP 49 50 50 ASP ASP A . n A 1 50 TYR 50 51 51 TYR TYR A . n A 1 51 GLU 51 52 52 GLU GLU A . n A 1 52 GLY 52 53 53 GLY GLY A . n A 1 53 GLN 53 54 54 GLN GLN A . n A 1 54 PHE 54 55 55 PHE PHE A . n A 1 55 ASP 55 56 56 ASP ASP A . n A 1 56 TYR 56 57 57 TYR TYR A . n A 1 57 VAL 57 58 58 VAL VAL A . n A 1 58 ALA 58 59 59 ALA ALA A . n A 1 59 VAL 59 60 60 VAL VAL A . n A 1 60 ALA 60 61 61 ALA ALA A . n A 1 61 SER 61 62 62 SER SER A . n A 1 62 THR 62 63 63 THR THR A . n A 1 63 GLY 63 64 64 GLY GLY A . n A 1 64 ILE 64 65 65 ILE ILE A . n A 1 65 ILE 65 66 66 ILE ILE A . n A 1 66 ASN 66 67 67 ASN ASN A . n A 1 67 ASN 67 68 68 ASN ASN A . n A 1 68 GLY 68 69 69 GLY GLY A . n A 1 69 ILE 69 70 70 ILE ILE A . n A 1 70 LEU 70 71 71 LEU LEU A . n A 1 71 SER 71 72 72 SER SER A . n A 1 72 ALA 72 73 73 ALA ALA A . n A 1 73 LEU 73 74 74 LEU LEU A . n A 1 74 ASN 74 75 75 ASN ASN A . n A 1 75 PRO 75 76 76 PRO PRO A . n A 1 76 LYS 76 77 77 LYS LYS A . n A 1 77 ASN 77 78 78 ASN ASN A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 GLY 79 80 80 GLY GLY A . n A 1 80 GLY 80 81 81 GLY GLY A . n A 1 81 LEU 81 82 82 LEU LEU A . n A 1 82 ALA 82 83 83 ALA ALA A . n A 1 83 GLU 83 84 84 GLU GLU A . n A 1 84 PHE 84 85 85 PHE PHE A . n A 1 85 PRO 85 86 86 PRO PRO A . n A 1 86 LEU 86 87 87 LEU LEU A . n A 1 87 LYS 87 88 88 LYS LYS A . n A 1 88 ALA 88 89 89 ALA ALA A . n A 1 89 SER 89 90 90 SER SER A . n A 1 90 ILE 90 91 91 ILE ILE A . n A 1 91 ALA 91 92 92 ALA ALA A . n A 1 92 LYS 92 93 93 LYS LYS A . n A 1 93 HIS 93 94 94 HIS HIS A . n A 1 94 THR 94 95 95 THR THR A . n A 1 95 ASP 95 96 96 ASP ASP A . n A 1 96 LYS 96 97 97 LYS LYS A . n A 1 97 PRO 97 98 98 PRO PRO A . n A 1 98 ILE 98 99 99 ILE ILE A . n A 1 99 GLY 99 100 100 GLY GLY A . n A 1 100 LEU 100 101 101 LEU LEU A . n A 1 101 LEU 101 102 102 LEU LEU A . n A 1 102 ASN 102 103 103 ASN ASN A . n A 1 103 ASP 103 104 104 ASP ASP A . n A 1 104 ALA 104 105 105 ALA ALA A . n A 1 105 GLN 105 106 106 GLN GLN A . n A 1 106 ALA 106 107 107 ALA ALA A . n A 1 107 ALA 107 108 108 ALA ALA A . n A 1 108 THR 108 109 109 THR THR A . n A 1 109 TYR 109 110 110 TYR TYR A . n A 1 110 ALA 110 111 111 ALA ALA A . n A 1 111 GLU 111 112 112 GLU GLU A . n A 1 112 TYR 112 113 113 TYR TYR A . n A 1 113 GLN 113 114 114 GLN GLN A . n A 1 114 LEU 114 115 115 LEU LEU A . n A 1 115 GLN 115 116 116 GLN GLN A . n A 1 116 ASN 116 117 117 ASN ASN A . n A 1 117 PHE 117 118 118 PHE PHE A . n A 1 118 GLU 118 119 119 GLU GLU A . n A 1 119 GLN 119 120 120 GLN GLN A . n A 1 120 VAL 120 121 121 VAL VAL A . n A 1 121 SER 121 122 122 SER SER A . n A 1 122 ASN 122 123 123 ASN ASN A . n A 1 123 PHE 123 124 124 PHE PHE A . n A 1 124 VAL 124 125 125 VAL VAL A . n A 1 125 PHE 125 126 126 PHE PHE A . n A 1 126 ILE 126 127 127 ILE ILE A . n A 1 127 THR 127 128 128 THR THR A . n A 1 128 VAL 128 129 129 VAL VAL A . n A 1 129 SER 129 130 130 SER SER A . n A 1 130 THR 130 131 131 THR THR A . n A 1 131 GLY 131 132 132 GLY GLY A . n A 1 132 VAL 132 133 133 VAL VAL A . n A 1 133 GLY 133 134 134 GLY GLY A . n A 1 134 GLY 134 135 135 GLY GLY A . n A 1 135 GLY 135 136 136 GLY GLY A . n A 1 136 ILE 136 137 137 ILE ILE A . n A 1 137 VAL 137 138 138 VAL VAL A . n A 1 138 LEU 138 139 139 LEU LEU A . n A 1 139 ASN 139 140 140 ASN ASN A . n A 1 140 GLN 140 141 141 GLN GLN A . n A 1 141 ILE 141 142 142 ILE ILE A . n A 1 142 LEU 142 143 143 LEU LEU A . n A 1 143 GLN 143 144 144 GLN GLN A . n A 1 144 THR 144 145 145 THR THR A . n A 1 145 GLY 145 146 146 GLY GLY A . n A 1 146 SER 146 147 147 SER SER A . n A 1 147 ARG 147 148 148 ARG ARG A . n A 1 148 GLY 148 149 149 GLY GLY A . n A 1 149 ILE 149 150 150 ILE ILE A . n A 1 150 ALA 150 151 151 ALA ALA A . n A 1 151 GLY 151 152 152 GLY GLY A . n A 1 152 HIS 152 153 153 HIS HIS A . n A 1 153 ILE 153 154 154 ILE ILE A . n A 1 154 GLY 154 155 155 GLY GLY A . n A 1 155 HIS 155 156 156 HIS HIS A . n A 1 156 THR 156 157 157 THR THR A . n A 1 157 LEU 157 158 158 LEU LEU A . n A 1 158 ALA 158 159 159 ALA ALA A . n A 1 159 ASP 159 160 160 ASP ASP A . n A 1 160 PRO 160 161 161 PRO PRO A . n A 1 161 ASN 161 162 162 ASN ASN A . n A 1 162 GLY 162 163 163 GLY GLY A . n A 1 163 ALA 163 164 164 ALA ALA A . n A 1 164 ILE 164 165 165 ILE ILE A . n A 1 165 CYS 165 166 166 CYS CYS A . n A 1 166 GLY 166 167 167 GLY GLY A . n A 1 167 CYS 167 168 168 CYS CYS A . n A 1 168 GLY 168 169 169 GLY GLY A . n A 1 169 ARG 169 170 170 ARG ARG A . n A 1 170 ARG 170 171 171 ARG ARG A . n A 1 171 GLY 171 172 172 GLY GLY A . n A 1 172 CYS 172 173 173 CYS CYS A . n A 1 173 VAL 173 174 174 VAL VAL A . n A 1 174 GLU 174 175 175 GLU GLU A . n A 1 175 ALA 175 176 176 ALA ALA A . n A 1 176 ILE 176 177 177 ILE ILE A . n A 1 177 ALA 177 178 178 ALA ALA A . n A 1 178 SER 178 179 179 SER SER A . n A 1 179 GLY 179 180 180 GLY GLY A . n A 1 180 ARG 180 181 181 ARG ARG A . n A 1 181 ALA 181 182 182 ALA ALA A . n A 1 182 ILE 182 183 183 ILE ILE A . n A 1 183 GLU 183 184 184 GLU GLU A . n A 1 184 ALA 184 185 185 ALA ALA A . n A 1 185 VAL 185 186 186 VAL VAL A . n A 1 186 SER 186 187 187 SER SER A . n A 1 187 SER 187 188 188 SER SER A . n A 1 188 GLN 188 189 189 GLN GLN A . n A 1 189 TRP 189 190 190 TRP TRP A . n A 1 190 GLU 190 191 191 GLU GLU A . n A 1 191 ASP 191 192 192 ASP ASP A . n A 1 192 PRO 192 193 193 PRO PRO A . n A 1 193 CYS 193 194 194 CYS CYS A . n A 1 194 ASP 194 195 195 ASP ASP A . n A 1 195 PRO 195 196 196 PRO PRO A . n A 1 196 LYS 196 197 197 LYS LYS A . n A 1 197 GLU 197 198 198 GLU GLU A . n A 1 198 VAL 198 199 199 VAL VAL A . n A 1 199 PHE 199 200 200 PHE PHE A . n A 1 200 GLU 200 201 201 GLU GLU A . n A 1 201 ARG 201 202 202 ARG ARG A . n A 1 202 PHE 202 203 203 PHE PHE A . n A 1 203 ARG 203 204 204 ARG ARG A . n A 1 204 LYS 204 205 205 LYS LYS A . n A 1 205 ASN 205 206 206 ASN ASN A . n A 1 206 ASP 206 207 207 ASP ASP A . n A 1 207 GLU 207 208 208 GLU GLU A . n A 1 208 LYS 208 209 209 LYS LYS A . n A 1 209 ALA 209 210 210 ALA ALA A . n A 1 210 THR 210 211 211 THR THR A . n A 1 211 ALA 211 212 212 ALA ALA A . n A 1 212 LEU 212 213 213 LEU LEU A . n A 1 213 VAL 213 214 214 VAL VAL A . n A 1 214 GLU 214 215 215 GLU GLU A . n A 1 215 ARG 215 216 216 ARG ARG A . n A 1 216 SER 216 217 217 SER SER A . n A 1 217 ALA 217 218 218 ALA ALA A . n A 1 218 LYS 218 219 219 LYS LYS A . n A 1 219 ALA 219 220 220 ALA ALA A . n A 1 220 ILE 220 221 221 ILE ILE A . n A 1 221 ALA 221 222 222 ALA ALA A . n A 1 222 ASN 222 223 223 ASN ASN A . n A 1 223 LEU 223 224 224 LEU LEU A . n A 1 224 ILE 224 225 225 ILE ILE A . n A 1 225 ALA 225 226 226 ALA ALA A . n A 1 226 ASP 226 227 227 ASP ASP A . n A 1 227 LEU 227 228 228 LEU LEU A . n A 1 228 VAL 228 229 229 VAL VAL A . n A 1 229 ILE 229 230 230 ILE ILE A . n A 1 230 SER 230 231 231 SER SER A . n A 1 231 LEU 231 232 232 LEU LEU A . n A 1 232 ASP 232 233 233 ASP ASP A . n A 1 233 ILE 233 234 234 ILE ILE A . n A 1 234 GLN 234 235 235 GLN GLN A . n A 1 235 LYS 235 236 236 LYS LYS A . n A 1 236 ILE 236 237 237 ILE ILE A . n A 1 237 ALA 237 238 238 ALA ALA A . n A 1 238 ILE 238 239 239 ILE ILE A . n A 1 239 GLY 239 240 240 GLY GLY A . n A 1 240 GLY 240 241 241 GLY GLY A . n A 1 241 SER 241 242 242 SER SER A . n A 1 242 VAL 242 243 243 VAL VAL A . n A 1 243 GLY 243 244 244 GLY GLY A . n A 1 244 LEU 244 245 245 LEU LEU A . n A 1 245 ALA 245 246 246 ALA ALA A . n A 1 246 GLU 246 247 247 GLU GLU A . n A 1 247 GLY 247 248 248 GLY GLY A . n A 1 248 TYR 248 249 249 TYR TYR A . n A 1 249 LEU 249 250 250 LEU LEU A . n A 1 250 SER 250 251 251 SER SER A . n A 1 251 LEU 251 252 252 LEU LEU A . n A 1 252 VAL 252 253 253 VAL VAL A . n A 1 253 GLU 253 254 254 GLU GLU A . n A 1 254 LYS 254 255 255 LYS LYS A . n A 1 255 TYR 255 256 256 TYR TYR A . n A 1 256 LEU 256 257 257 LEU LEU A . n A 1 257 GLN 257 258 258 GLN GLN A . n A 1 258 ASP 258 259 259 ASP ASP A . n A 1 259 PHE 259 260 260 PHE PHE A . n A 1 260 PRO 260 261 261 PRO PRO A . n A 1 261 SER 261 262 262 SER SER A . n A 1 262 ILE 262 263 263 ILE ILE A . n A 1 263 TYR 263 264 264 TYR TYR A . n A 1 264 CYS 264 265 265 CYS CYS A . n A 1 265 CYS 265 266 266 CYS CYS A . n A 1 266 GLU 266 267 267 GLU GLU A . n A 1 267 ILE 267 268 268 ILE ILE A . n A 1 268 GLU 268 269 269 GLU GLU A . n A 1 269 THR 269 270 270 THR THR A . n A 1 270 ALA 270 271 271 ALA ALA A . n A 1 271 LYS 271 272 272 LYS LYS A . n A 1 272 PHE 272 273 273 PHE PHE A . n A 1 273 GLY 273 274 274 GLY GLY A . n A 1 274 GLN 274 275 275 GLN GLN A . n A 1 275 ASP 275 276 276 ASP ASP A . n A 1 276 ALA 276 277 277 ALA ALA A . n A 1 277 GLY 277 278 278 GLY GLY A . n A 1 278 LEU 278 279 279 LEU LEU A . n A 1 279 ILE 279 280 280 ILE ILE A . n A 1 280 GLY 280 281 281 GLY GLY A . n A 1 281 ALA 281 282 282 ALA ALA A . n A 1 282 ALA 282 283 283 ALA ALA A . n A 1 283 TYR 283 284 284 TYR TYR A . n A 1 284 TRP 284 285 285 TRP TRP A . n A 1 285 VAL 285 286 286 VAL VAL A . n A 1 286 LYS 286 287 287 LYS LYS A . n A 1 287 ASP 287 288 288 ASP ASP A . n A 1 288 VAL 288 289 289 VAL VAL A . n A 1 289 LEU 289 290 290 LEU LEU A . n A 1 290 LEU 290 291 291 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP 1 301 1 ADP ADP A . C 3 BMX 1 302 1 BMX BMX A . D 4 ZN 1 303 1 ZN ZN A . E 5 HOH 1 401 10 HOH HOH A . E 5 HOH 2 402 2 HOH HOH A . E 5 HOH 3 403 1 HOH HOH A . E 5 HOH 4 404 5 HOH HOH A . E 5 HOH 5 405 4 HOH HOH A . E 5 HOH 6 406 9 HOH HOH A . E 5 HOH 7 407 8 HOH HOH A . E 5 HOH 8 408 6 HOH HOH A . E 5 HOH 9 409 12 HOH HOH A . E 5 HOH 10 410 11 HOH HOH A . E 5 HOH 11 411 7 HOH HOH A . E 5 HOH 12 412 3 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4570 ? 1 MORE -37 ? 1 'SSA (A^2)' 22520 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+1 0.0000000000 -1.0000000000 0.0000000000 92.5910000000 -1.0000000000 0.0000000000 0.0000000000 92.5910000000 0.0000000000 0.0000000000 -1.0000000000 183.3210000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 155 ? A HIS 156 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 SG ? A CYS 165 ? A CYS 166 ? 1_555 103.7 ? 2 ND1 ? A HIS 155 ? A HIS 156 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 SG ? A CYS 167 ? A CYS 168 ? 1_555 119.7 ? 3 SG ? A CYS 165 ? A CYS 166 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 SG ? A CYS 167 ? A CYS 168 ? 1_555 109.2 ? 4 ND1 ? A HIS 155 ? A HIS 156 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 SG ? A CYS 172 ? A CYS 173 ? 1_555 113.7 ? 5 SG ? A CYS 165 ? A CYS 166 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 SG ? A CYS 172 ? A CYS 173 ? 1_555 103.6 ? 6 SG ? A CYS 167 ? A CYS 168 ? 1_555 ZN ? D ZN . ? A ZN 303 ? 1_555 SG ? A CYS 172 ? A CYS 173 ? 1_555 105.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-02-05 2 'Structure model' 1 1 2020-07-29 3 'Structure model' 1 2 2020-12-16 4 'Structure model' 1 3 2023-11-22 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Structure summary' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_entity_nonpoly 5 2 'Structure model' struct_site 6 2 'Structure model' struct_site_gen 7 3 'Structure model' chem_comp 8 3 'Structure model' citation 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' database_2 12 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.mon_nstd_flag' 2 2 'Structure model' '_chem_comp.name' 3 2 'Structure model' '_chem_comp.type' 4 2 'Structure model' '_entity.pdbx_description' 5 2 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_chem_comp.pdbx_synonyms' 7 3 'Structure model' '_citation.country' 8 3 'Structure model' '_citation.journal_abbrev' 9 3 'Structure model' '_citation.journal_id_CSD' 10 3 'Structure model' '_citation.journal_id_ISSN' 11 3 'Structure model' '_citation.journal_volume' 12 3 'Structure model' '_citation.page_first' 13 3 'Structure model' '_citation.page_last' 14 3 'Structure model' '_citation.pdbx_database_id_DOI' 15 3 'Structure model' '_citation.title' 16 3 'Structure model' '_citation.year' 17 4 'Structure model' '_database_2.pdbx_DOI' 18 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.2 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.14_3211: ???)' 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 19 ? ? -73.15 -72.00 2 1 GLN A 28 ? ? -161.55 85.63 3 1 ASP A 50 ? ? -64.17 2.01 4 1 LEU A 102 ? ? -172.32 141.86 5 1 SER A 130 ? ? -114.41 -127.40 6 1 PRO A 161 ? ? -67.35 1.03 7 1 ASN A 206 ? ? 73.05 33.84 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 BMX C1 C N S 116 BMX C2 C N S 117 BMX C3 C N R 118 BMX C4 C N S 119 BMX C5 C N R 120 BMX C6 C N N 121 BMX C7 C N N 122 BMX C8 C N N 123 BMX N2 N N N 124 BMX O1 O N N 125 BMX O3 O N N 126 BMX O4 O N N 127 BMX O5 O N N 128 BMX O6 O N N 129 BMX O7 O N N 130 BMX P P N N 131 BMX O19 O N N 132 BMX O17 O N N 133 BMX O18 O N N 134 BMX H1 H N N 135 BMX HO1 H N N 136 BMX H2 H N N 137 BMX HN2 H N N 138 BMX H3 H N N 139 BMX H81 H N N 140 BMX H82 H N N 141 BMX H83 H N N 142 BMX HO3 H N N 143 BMX H4 H N N 144 BMX HO4 H N N 145 BMX H5 H N N 146 BMX H61 H N N 147 BMX H62 H N N 148 BMX H18 H N N 149 BMX H19 H N N 150 CYS N N N N 151 CYS CA C N R 152 CYS C C N N 153 CYS O O N N 154 CYS CB C N N 155 CYS SG S N N 156 CYS OXT O N N 157 CYS H H N N 158 CYS H2 H N N 159 CYS HA H N N 160 CYS HB2 H N N 161 CYS HB3 H N N 162 CYS HG H N N 163 CYS HXT H N N 164 GLN N N N N 165 GLN CA C N S 166 GLN C C N N 167 GLN O O N N 168 GLN CB C N N 169 GLN CG C N N 170 GLN CD C N N 171 GLN OE1 O N N 172 GLN NE2 N N N 173 GLN OXT O N N 174 GLN H H N N 175 GLN H2 H N N 176 GLN HA H N N 177 GLN HB2 H N N 178 GLN HB3 H N N 179 GLN HG2 H N N 180 GLN HG3 H N N 181 GLN HE21 H N N 182 GLN HE22 H N N 183 GLN HXT H N N 184 GLU N N N N 185 GLU CA C N S 186 GLU C C N N 187 GLU O O N N 188 GLU CB C N N 189 GLU CG C N N 190 GLU CD C N N 191 GLU OE1 O N N 192 GLU OE2 O N N 193 GLU OXT O N N 194 GLU H H N N 195 GLU H2 H N N 196 GLU HA H N N 197 GLU HB2 H N N 198 GLU HB3 H N N 199 GLU HG2 H N N 200 GLU HG3 H N N 201 GLU HE2 H N N 202 GLU HXT H N N 203 GLY N N N N 204 GLY CA C N N 205 GLY C C N N 206 GLY O O N N 207 GLY OXT O N N 208 GLY H H N N 209 GLY H2 H N N 210 GLY HA2 H N N 211 GLY HA3 H N N 212 GLY HXT H N N 213 HIS N N N N 214 HIS CA C N S 215 HIS C C N N 216 HIS O O N N 217 HIS CB C N N 218 HIS CG C Y N 219 HIS ND1 N Y N 220 HIS CD2 C Y N 221 HIS CE1 C Y N 222 HIS NE2 N Y N 223 HIS OXT O N N 224 HIS H H N N 225 HIS H2 H N N 226 HIS HA H N N 227 HIS HB2 H N N 228 HIS HB3 H N N 229 HIS HD1 H N N 230 HIS HD2 H N N 231 HIS HE1 H N N 232 HIS HE2 H N N 233 HIS HXT H N N 234 HOH O O N N 235 HOH H1 H N N 236 HOH H2 H N N 237 ILE N N N N 238 ILE CA C N S 239 ILE C C N N 240 ILE O O N N 241 ILE CB C N S 242 ILE CG1 C N N 243 ILE CG2 C N N 244 ILE CD1 C N N 245 ILE OXT O N N 246 ILE H H N N 247 ILE H2 H N N 248 ILE HA H N N 249 ILE HB H N N 250 ILE HG12 H N N 251 ILE HG13 H N N 252 ILE HG21 H N N 253 ILE HG22 H N N 254 ILE HG23 H N N 255 ILE HD11 H N N 256 ILE HD12 H N N 257 ILE HD13 H N N 258 ILE HXT H N N 259 LEU N N N N 260 LEU CA C N S 261 LEU C C N N 262 LEU O O N N 263 LEU CB C N N 264 LEU CG C N N 265 LEU CD1 C N N 266 LEU CD2 C N N 267 LEU OXT O N N 268 LEU H H N N 269 LEU H2 H N N 270 LEU HA H N N 271 LEU HB2 H N N 272 LEU HB3 H N N 273 LEU HG H N N 274 LEU HD11 H N N 275 LEU HD12 H N N 276 LEU HD13 H N N 277 LEU HD21 H N N 278 LEU HD22 H N N 279 LEU HD23 H N N 280 LEU HXT H N N 281 LYS N N N N 282 LYS CA C N S 283 LYS C C N N 284 LYS O O N N 285 LYS CB C N N 286 LYS CG C N N 287 LYS CD C N N 288 LYS CE C N N 289 LYS NZ N N N 290 LYS OXT O N N 291 LYS H H N N 292 LYS H2 H N N 293 LYS HA H N N 294 LYS HB2 H N N 295 LYS HB3 H N N 296 LYS HG2 H N N 297 LYS HG3 H N N 298 LYS HD2 H N N 299 LYS HD3 H N N 300 LYS HE2 H N N 301 LYS HE3 H N N 302 LYS HZ1 H N N 303 LYS HZ2 H N N 304 LYS HZ3 H N N 305 LYS HXT H N N 306 MET N N N N 307 MET CA C N S 308 MET C C N N 309 MET O O N N 310 MET CB C N N 311 MET CG C N N 312 MET SD S N N 313 MET CE C N N 314 MET OXT O N N 315 MET H H N N 316 MET H2 H N N 317 MET HA H N N 318 MET HB2 H N N 319 MET HB3 H N N 320 MET HG2 H N N 321 MET HG3 H N N 322 MET HE1 H N N 323 MET HE2 H N N 324 MET HE3 H N N 325 MET HXT H N N 326 PHE N N N N 327 PHE CA C N S 328 PHE C C N N 329 PHE O O N N 330 PHE CB C N N 331 PHE CG C Y N 332 PHE CD1 C Y N 333 PHE CD2 C Y N 334 PHE CE1 C Y N 335 PHE CE2 C Y N 336 PHE CZ C Y N 337 PHE OXT O N N 338 PHE H H N N 339 PHE H2 H N N 340 PHE HA H N N 341 PHE HB2 H N N 342 PHE HB3 H N N 343 PHE HD1 H N N 344 PHE HD2 H N N 345 PHE HE1 H N N 346 PHE HE2 H N N 347 PHE HZ H N N 348 PHE HXT H N N 349 PRO N N N N 350 PRO CA C N S 351 PRO C C N N 352 PRO O O N N 353 PRO CB C N N 354 PRO CG C N N 355 PRO CD C N N 356 PRO OXT O N N 357 PRO H H N N 358 PRO HA H N N 359 PRO HB2 H N N 360 PRO HB3 H N N 361 PRO HG2 H N N 362 PRO HG3 H N N 363 PRO HD2 H N N 364 PRO HD3 H N N 365 PRO HXT H N N 366 SER N N N N 367 SER CA C N S 368 SER C C N N 369 SER O O N N 370 SER CB C N N 371 SER OG O N N 372 SER OXT O N N 373 SER H H N N 374 SER H2 H N N 375 SER HA H N N 376 SER HB2 H N N 377 SER HB3 H N N 378 SER HG H N N 379 SER HXT H N N 380 THR N N N N 381 THR CA C N S 382 THR C C N N 383 THR O O N N 384 THR CB C N R 385 THR OG1 O N N 386 THR CG2 C N N 387 THR OXT O N N 388 THR H H N N 389 THR H2 H N N 390 THR HA H N N 391 THR HB H N N 392 THR HG1 H N N 393 THR HG21 H N N 394 THR HG22 H N N 395 THR HG23 H N N 396 THR HXT H N N 397 TRP N N N N 398 TRP CA C N S 399 TRP C C N N 400 TRP O O N N 401 TRP CB C N N 402 TRP CG C Y N 403 TRP CD1 C Y N 404 TRP CD2 C Y N 405 TRP NE1 N Y N 406 TRP CE2 C Y N 407 TRP CE3 C Y N 408 TRP CZ2 C Y N 409 TRP CZ3 C Y N 410 TRP CH2 C Y N 411 TRP OXT O N N 412 TRP H H N N 413 TRP H2 H N N 414 TRP HA H N N 415 TRP HB2 H N N 416 TRP HB3 H N N 417 TRP HD1 H N N 418 TRP HE1 H N N 419 TRP HE3 H N N 420 TRP HZ2 H N N 421 TRP HZ3 H N N 422 TRP HH2 H N N 423 TRP HXT H N N 424 TYR N N N N 425 TYR CA C N S 426 TYR C C N N 427 TYR O O N N 428 TYR CB C N N 429 TYR CG C Y N 430 TYR CD1 C Y N 431 TYR CD2 C Y N 432 TYR CE1 C Y N 433 TYR CE2 C Y N 434 TYR CZ C Y N 435 TYR OH O N N 436 TYR OXT O N N 437 TYR H H N N 438 TYR H2 H N N 439 TYR HA H N N 440 TYR HB2 H N N 441 TYR HB3 H N N 442 TYR HD1 H N N 443 TYR HD2 H N N 444 TYR HE1 H N N 445 TYR HE2 H N N 446 TYR HH H N N 447 TYR HXT H N N 448 VAL N N N N 449 VAL CA C N S 450 VAL C C N N 451 VAL O O N N 452 VAL CB C N N 453 VAL CG1 C N N 454 VAL CG2 C N N 455 VAL OXT O N N 456 VAL H H N N 457 VAL H2 H N N 458 VAL HA H N N 459 VAL HB H N N 460 VAL HG11 H N N 461 VAL HG12 H N N 462 VAL HG13 H N N 463 VAL HG21 H N N 464 VAL HG22 H N N 465 VAL HG23 H N N 466 VAL HXT H N N 467 ZN ZN ZN N N 468 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 BMX C1 O1 sing N N 114 BMX C1 C2 sing N N 115 BMX C1 O5 sing N N 116 BMX C2 N2 sing N N 117 BMX C2 C3 sing N N 118 BMX N2 C7 sing N N 119 BMX C7 O7 doub N N 120 BMX C7 C8 sing N N 121 BMX C3 O3 sing N N 122 BMX C3 C4 sing N N 123 BMX C4 O4 sing N N 124 BMX C4 C5 sing N N 125 BMX C5 C6 sing N N 126 BMX C5 O5 sing N N 127 BMX C6 O6 sing N N 128 BMX O6 P sing N N 129 BMX P O17 doub N N 130 BMX P O18 sing N N 131 BMX P O19 sing N N 132 BMX C1 H1 sing N N 133 BMX O1 HO1 sing N N 134 BMX C2 H2 sing N N 135 BMX N2 HN2 sing N N 136 BMX C3 H3 sing N N 137 BMX C8 H81 sing N N 138 BMX C8 H82 sing N N 139 BMX C8 H83 sing N N 140 BMX O3 HO3 sing N N 141 BMX C4 H4 sing N N 142 BMX O4 HO4 sing N N 143 BMX C5 H5 sing N N 144 BMX C6 H61 sing N N 145 BMX C6 H62 sing N N 146 BMX O18 H18 sing N N 147 BMX O19 H19 sing N N 148 CYS N CA sing N N 149 CYS N H sing N N 150 CYS N H2 sing N N 151 CYS CA C sing N N 152 CYS CA CB sing N N 153 CYS CA HA sing N N 154 CYS C O doub N N 155 CYS C OXT sing N N 156 CYS CB SG sing N N 157 CYS CB HB2 sing N N 158 CYS CB HB3 sing N N 159 CYS SG HG sing N N 160 CYS OXT HXT sing N N 161 GLN N CA sing N N 162 GLN N H sing N N 163 GLN N H2 sing N N 164 GLN CA C sing N N 165 GLN CA CB sing N N 166 GLN CA HA sing N N 167 GLN C O doub N N 168 GLN C OXT sing N N 169 GLN CB CG sing N N 170 GLN CB HB2 sing N N 171 GLN CB HB3 sing N N 172 GLN CG CD sing N N 173 GLN CG HG2 sing N N 174 GLN CG HG3 sing N N 175 GLN CD OE1 doub N N 176 GLN CD NE2 sing N N 177 GLN NE2 HE21 sing N N 178 GLN NE2 HE22 sing N N 179 GLN OXT HXT sing N N 180 GLU N CA sing N N 181 GLU N H sing N N 182 GLU N H2 sing N N 183 GLU CA C sing N N 184 GLU CA CB sing N N 185 GLU CA HA sing N N 186 GLU C O doub N N 187 GLU C OXT sing N N 188 GLU CB CG sing N N 189 GLU CB HB2 sing N N 190 GLU CB HB3 sing N N 191 GLU CG CD sing N N 192 GLU CG HG2 sing N N 193 GLU CG HG3 sing N N 194 GLU CD OE1 doub N N 195 GLU CD OE2 sing N N 196 GLU OE2 HE2 sing N N 197 GLU OXT HXT sing N N 198 GLY N CA sing N N 199 GLY N H sing N N 200 GLY N H2 sing N N 201 GLY CA C sing N N 202 GLY CA HA2 sing N N 203 GLY CA HA3 sing N N 204 GLY C O doub N N 205 GLY C OXT sing N N 206 GLY OXT HXT sing N N 207 HIS N CA sing N N 208 HIS N H sing N N 209 HIS N H2 sing N N 210 HIS CA C sing N N 211 HIS CA CB sing N N 212 HIS CA HA sing N N 213 HIS C O doub N N 214 HIS C OXT sing N N 215 HIS CB CG sing N N 216 HIS CB HB2 sing N N 217 HIS CB HB3 sing N N 218 HIS CG ND1 sing Y N 219 HIS CG CD2 doub Y N 220 HIS ND1 CE1 doub Y N 221 HIS ND1 HD1 sing N N 222 HIS CD2 NE2 sing Y N 223 HIS CD2 HD2 sing N N 224 HIS CE1 NE2 sing Y N 225 HIS CE1 HE1 sing N N 226 HIS NE2 HE2 sing N N 227 HIS OXT HXT sing N N 228 HOH O H1 sing N N 229 HOH O H2 sing N N 230 ILE N CA sing N N 231 ILE N H sing N N 232 ILE N H2 sing N N 233 ILE CA C sing N N 234 ILE CA CB sing N N 235 ILE CA HA sing N N 236 ILE C O doub N N 237 ILE C OXT sing N N 238 ILE CB CG1 sing N N 239 ILE CB CG2 sing N N 240 ILE CB HB sing N N 241 ILE CG1 CD1 sing N N 242 ILE CG1 HG12 sing N N 243 ILE CG1 HG13 sing N N 244 ILE CG2 HG21 sing N N 245 ILE CG2 HG22 sing N N 246 ILE CG2 HG23 sing N N 247 ILE CD1 HD11 sing N N 248 ILE CD1 HD12 sing N N 249 ILE CD1 HD13 sing N N 250 ILE OXT HXT sing N N 251 LEU N CA sing N N 252 LEU N H sing N N 253 LEU N H2 sing N N 254 LEU CA C sing N N 255 LEU CA CB sing N N 256 LEU CA HA sing N N 257 LEU C O doub N N 258 LEU C OXT sing N N 259 LEU CB CG sing N N 260 LEU CB HB2 sing N N 261 LEU CB HB3 sing N N 262 LEU CG CD1 sing N N 263 LEU CG CD2 sing N N 264 LEU CG HG sing N N 265 LEU CD1 HD11 sing N N 266 LEU CD1 HD12 sing N N 267 LEU CD1 HD13 sing N N 268 LEU CD2 HD21 sing N N 269 LEU CD2 HD22 sing N N 270 LEU CD2 HD23 sing N N 271 LEU OXT HXT sing N N 272 LYS N CA sing N N 273 LYS N H sing N N 274 LYS N H2 sing N N 275 LYS CA C sing N N 276 LYS CA CB sing N N 277 LYS CA HA sing N N 278 LYS C O doub N N 279 LYS C OXT sing N N 280 LYS CB CG sing N N 281 LYS CB HB2 sing N N 282 LYS CB HB3 sing N N 283 LYS CG CD sing N N 284 LYS CG HG2 sing N N 285 LYS CG HG3 sing N N 286 LYS CD CE sing N N 287 LYS CD HD2 sing N N 288 LYS CD HD3 sing N N 289 LYS CE NZ sing N N 290 LYS CE HE2 sing N N 291 LYS CE HE3 sing N N 292 LYS NZ HZ1 sing N N 293 LYS NZ HZ2 sing N N 294 LYS NZ HZ3 sing N N 295 LYS OXT HXT sing N N 296 MET N CA sing N N 297 MET N H sing N N 298 MET N H2 sing N N 299 MET CA C sing N N 300 MET CA CB sing N N 301 MET CA HA sing N N 302 MET C O doub N N 303 MET C OXT sing N N 304 MET CB CG sing N N 305 MET CB HB2 sing N N 306 MET CB HB3 sing N N 307 MET CG SD sing N N 308 MET CG HG2 sing N N 309 MET CG HG3 sing N N 310 MET SD CE sing N N 311 MET CE HE1 sing N N 312 MET CE HE2 sing N N 313 MET CE HE3 sing N N 314 MET OXT HXT sing N N 315 PHE N CA sing N N 316 PHE N H sing N N 317 PHE N H2 sing N N 318 PHE CA C sing N N 319 PHE CA CB sing N N 320 PHE CA HA sing N N 321 PHE C O doub N N 322 PHE C OXT sing N N 323 PHE CB CG sing N N 324 PHE CB HB2 sing N N 325 PHE CB HB3 sing N N 326 PHE CG CD1 doub Y N 327 PHE CG CD2 sing Y N 328 PHE CD1 CE1 sing Y N 329 PHE CD1 HD1 sing N N 330 PHE CD2 CE2 doub Y N 331 PHE CD2 HD2 sing N N 332 PHE CE1 CZ doub Y N 333 PHE CE1 HE1 sing N N 334 PHE CE2 CZ sing Y N 335 PHE CE2 HE2 sing N N 336 PHE CZ HZ sing N N 337 PHE OXT HXT sing N N 338 PRO N CA sing N N 339 PRO N CD sing N N 340 PRO N H sing N N 341 PRO CA C sing N N 342 PRO CA CB sing N N 343 PRO CA HA sing N N 344 PRO C O doub N N 345 PRO C OXT sing N N 346 PRO CB CG sing N N 347 PRO CB HB2 sing N N 348 PRO CB HB3 sing N N 349 PRO CG CD sing N N 350 PRO CG HG2 sing N N 351 PRO CG HG3 sing N N 352 PRO CD HD2 sing N N 353 PRO CD HD3 sing N N 354 PRO OXT HXT sing N N 355 SER N CA sing N N 356 SER N H sing N N 357 SER N H2 sing N N 358 SER CA C sing N N 359 SER CA CB sing N N 360 SER CA HA sing N N 361 SER C O doub N N 362 SER C OXT sing N N 363 SER CB OG sing N N 364 SER CB HB2 sing N N 365 SER CB HB3 sing N N 366 SER OG HG sing N N 367 SER OXT HXT sing N N 368 THR N CA sing N N 369 THR N H sing N N 370 THR N H2 sing N N 371 THR CA C sing N N 372 THR CA CB sing N N 373 THR CA HA sing N N 374 THR C O doub N N 375 THR C OXT sing N N 376 THR CB OG1 sing N N 377 THR CB CG2 sing N N 378 THR CB HB sing N N 379 THR OG1 HG1 sing N N 380 THR CG2 HG21 sing N N 381 THR CG2 HG22 sing N N 382 THR CG2 HG23 sing N N 383 THR OXT HXT sing N N 384 TRP N CA sing N N 385 TRP N H sing N N 386 TRP N H2 sing N N 387 TRP CA C sing N N 388 TRP CA CB sing N N 389 TRP CA HA sing N N 390 TRP C O doub N N 391 TRP C OXT sing N N 392 TRP CB CG sing N N 393 TRP CB HB2 sing N N 394 TRP CB HB3 sing N N 395 TRP CG CD1 doub Y N 396 TRP CG CD2 sing Y N 397 TRP CD1 NE1 sing Y N 398 TRP CD1 HD1 sing N N 399 TRP CD2 CE2 doub Y N 400 TRP CD2 CE3 sing Y N 401 TRP NE1 CE2 sing Y N 402 TRP NE1 HE1 sing N N 403 TRP CE2 CZ2 sing Y N 404 TRP CE3 CZ3 doub Y N 405 TRP CE3 HE3 sing N N 406 TRP CZ2 CH2 doub Y N 407 TRP CZ2 HZ2 sing N N 408 TRP CZ3 CH2 sing Y N 409 TRP CZ3 HZ3 sing N N 410 TRP CH2 HH2 sing N N 411 TRP OXT HXT sing N N 412 TYR N CA sing N N 413 TYR N H sing N N 414 TYR N H2 sing N N 415 TYR CA C sing N N 416 TYR CA CB sing N N 417 TYR CA HA sing N N 418 TYR C O doub N N 419 TYR C OXT sing N N 420 TYR CB CG sing N N 421 TYR CB HB2 sing N N 422 TYR CB HB3 sing N N 423 TYR CG CD1 doub Y N 424 TYR CG CD2 sing Y N 425 TYR CD1 CE1 sing Y N 426 TYR CD1 HD1 sing N N 427 TYR CD2 CE2 doub Y N 428 TYR CD2 HD2 sing N N 429 TYR CE1 CZ doub Y N 430 TYR CE1 HE1 sing N N 431 TYR CE2 CZ sing Y N 432 TYR CE2 HE2 sing N N 433 TYR CZ OH sing N N 434 TYR OH HH sing N N 435 TYR OXT HXT sing N N 436 VAL N CA sing N N 437 VAL N H sing N N 438 VAL N H2 sing N N 439 VAL CA C sing N N 440 VAL CA CB sing N N 441 VAL CA HA sing N N 442 VAL C O doub N N 443 VAL C OXT sing N N 444 VAL CB CG1 sing N N 445 VAL CB CG2 sing N N 446 VAL CB HB sing N N 447 VAL CG1 HG11 sing N N 448 VAL CG1 HG12 sing N N 449 VAL CG1 HG13 sing N N 450 VAL CG2 HG21 sing N N 451 VAL CG2 HG22 sing N N 452 VAL CG2 HG23 sing N N 453 VAL OXT HXT sing N N 454 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Department of Biotechnology (India)' India BT/IN/Sweden/06/SR/2017-18 1 'Department of Biotechnology (India)' India 'BT/PR12422/MED/31/287/ 2014' 2 # _pdbx_chem_comp_identifier.comp_id BMX _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier a-D-ManpNAc6PO3 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 ADP ? ? ADP ? ? 'SUBJECT OF INVESTIGATION' ? 2 BMX ? ? BMX ? ? 'SUBJECT OF INVESTIGATION' ? 3 ZN ? ? ZN ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose BMX 4 'ZINC ION' ZN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6JDA _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? #