HEADER TRANSFERASE 06-FEB-19 6JEL TITLE STRUCTURE OF PHYTOLACCA AMERICANA APO UGT2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.4.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHYTOLACCA AMERICANA; SOURCE 3 ORGANISM_COMMON: AMERICAN POKEWEED; SOURCE 4 ORGANISM_TAXID: 3527; SOURCE 5 GENE: PAGT2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCOLD KEYWDS GLYCOSYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.MAHARJAN,Y.FUKUDA,T.NAKAYAMA,H.HAMADA,S.OZAKI,T.INOUE REVDAT 4 22-NOV-23 6JEL 1 REMARK REVDAT 3 05-AUG-20 6JEL 1 JRNL REVDAT 2 22-JUL-20 6JEL 1 JRNL REVDAT 1 11-MAR-20 6JEL 0 JRNL AUTH R.MAHARJAN,Y.FUKUDA,N.SHIMOMURA,T.NAKAYAMA,Y.OKIMOTO, JRNL AUTH 2 K.KAWAKAMI,T.NAKAYAMA,H.HAMADA,T.INOUE,S.I.OZAKI JRNL TITL AN AMBIDEXTROUS POLYPHENOL GLYCOSYLTRANSFERASEPAGT2 JRNL TITL 2 FROMPHYTOLACCA AMERICANA. JRNL REF BIOCHEMISTRY V. 59 2551 2020 JRNL REFN ISSN 0006-2960 JRNL PMID 32525309 JRNL DOI 10.1021/ACS.BIOCHEM.0C00224 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 42879 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2231 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3095 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 153 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6971 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 149 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.362 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.240 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7146 ; 0.006 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9744 ; 1.034 ; 1.626 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 900 ; 5.529 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 326 ;34.980 ;22.454 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1148 ;15.608 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;15.313 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 925 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5426 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3615 ; 1.999 ; 5.016 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4510 ; 3.449 ; 7.512 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3531 ; 2.060 ; 5.204 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10498 ; 6.430 ;67.499 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 5 466 B 5 466 13681 0.12 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JEL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300010968. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45171 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.95900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2VCH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MAGNESIUM FORMATE 0.1 M MOPS PH REMARK 280 7.0 17% W/V PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.84350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.63650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.41100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.63650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.84350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.41100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 ASN A -18 REMARK 465 HIS A -17 REMARK 465 LYS A -16 REMARK 465 VAL A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 LEU A -8 REMARK 465 GLN A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 MET A 3 REMARK 465 GLU A 4 REMARK 465 GLY A 244 REMARK 465 LEU A 245 REMARK 465 ASP A 246 REMARK 465 ASP A 247 REMARK 465 ASP A 248 REMARK 465 SER A 249 REMARK 465 HIS A 250 REMARK 465 GLY A 251 REMARK 465 CYS A 467 REMARK 465 LYS A 468 REMARK 465 SER A 469 REMARK 465 MET B -19 REMARK 465 ASN B -18 REMARK 465 HIS B -17 REMARK 465 LYS B -16 REMARK 465 VAL B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 LEU B -8 REMARK 465 GLN B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 MET B 3 REMARK 465 GLU B 4 REMARK 465 LEU B 245 REMARK 465 ASP B 246 REMARK 465 ASP B 247 REMARK 465 ASP B 248 REMARK 465 SER B 249 REMARK 465 HIS B 250 REMARK 465 GLY B 251 REMARK 465 THR B 315 REMARK 465 GLN B 316 REMARK 465 SER B 317 REMARK 465 GLN B 318 REMARK 465 CYS B 467 REMARK 465 LYS B 468 REMARK 465 SER B 469 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N SER A 13 OD2 ASP A 115 1.93 REMARK 500 N SER B 13 OD2 ASP B 115 1.95 REMARK 500 OD1 ASP A 115 O HOH A 501 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 116 -8.49 -57.21 REMARK 500 SER A 138 -168.10 -110.57 REMARK 500 GLU A 217 58.57 -142.28 REMARK 500 SER A 342 -56.03 70.92 REMARK 500 LEU A 382 -71.59 -124.34 REMARK 500 ALA A 384 -123.93 57.33 REMARK 500 LEU B 116 -8.48 -56.58 REMARK 500 SER B 138 -167.55 -111.25 REMARK 500 GLU B 217 58.48 -141.88 REMARK 500 SER B 342 -59.39 70.36 REMARK 500 LEU B 382 -54.69 -126.03 REMARK 500 ALA B 384 -125.73 59.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE DATABASE WITH ID B5MGN7 CONTAINS RESIDUE TYR AT REMARK 999 POSITION 211. HOWEVER, AFTER OBSERVING THE DISCREPANCY, AUTHORS REMARK 999 CONFIRMED THAT RESIDUE AT 211 IS ASN AND NOT TYR. THE DEPOSITERS REMARK 999 WILL SOON CORRECT THE SEQUENCE IN THE DATABASE. DBREF 6JEL A 1 469 UNP B5MGN7 B5MGN7_PHYAM 1 469 DBREF 6JEL B 1 469 UNP B5MGN7 B5MGN7_PHYAM 1 469 SEQADV 6JEL MET A -19 UNP B5MGN7 INITIATING METHIONINE SEQADV 6JEL ASN A -18 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS A -17 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL LYS A -16 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL VAL A -15 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS A -14 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS A -13 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS A -12 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS A -11 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS A -10 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS A -9 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL LEU A -8 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL GLN A -7 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL GLU A -6 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL ASN A -5 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL LEU A -4 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL TYR A -3 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL PHE A -2 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL GLN A -1 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL GLY A 0 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL ASN A 211 UNP B5MGN7 TYR 211 SEE SEQUENCE DETAILS SEQADV 6JEL MET B -19 UNP B5MGN7 INITIATING METHIONINE SEQADV 6JEL ASN B -18 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS B -17 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL LYS B -16 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL VAL B -15 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS B -14 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS B -13 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS B -12 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS B -11 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS B -10 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL HIS B -9 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL LEU B -8 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL GLN B -7 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL GLU B -6 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL ASN B -5 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL LEU B -4 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL TYR B -3 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL PHE B -2 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL GLN B -1 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL GLY B 0 UNP B5MGN7 EXPRESSION TAG SEQADV 6JEL ASN B 211 UNP B5MGN7 TYR 211 SEE SEQUENCE DETAILS SEQRES 1 A 489 MET ASN HIS LYS VAL HIS HIS HIS HIS HIS HIS LEU GLN SEQRES 2 A 489 GLU ASN LEU TYR PHE GLN GLY MET GLU MET GLU ALA PRO SEQRES 3 A 489 LEU ILE VAL ILE VAL PRO SER PRO GLY MET GLY HIS LEU SEQRES 4 A 489 ILE PRO LEU VAL GLU PHE ALA LYS VAL LEU VAL SER ARG SEQRES 5 A 489 PHE HIS PHE SER VAL SER LEU LEU LEU PRO THR THR ALA SEQRES 6 A 489 GLN PRO THR LYS ALA GLN THR THR LEU LEU ASN SER LEU SEQRES 7 A 489 PRO SER SER VAL SER HIS ASN PHE LEU PRO THR VAL ASP SEQRES 8 A 489 PRO ALA HIS LEU PRO ASP GLY VAL ALA HIS GLU VAL THR SEQRES 9 A 489 ILE SER LEU THR HIS ALA HIS SER LEU SER SER ILE ARG SEQRES 10 A 489 ALA ALA LEU GLY SER LEU ALA GLN GLN ALA GLN VAL VAL SEQRES 11 A 489 ALA LEU ILE THR ASP LEU PHE GLY THR GLY LEU TYR THR SEQRES 12 A 489 VAL ALA ARG ASP LEU GLY ILE PRO PRO TYR LEU TYR PHE SEQRES 13 A 489 THR SER THR ALA MET CYS LEU LEU PHE LEU PHE HIS LEU SEQRES 14 A 489 PRO LYS LEU ASP GLU THR VAL SER CYS GLU TYR ARG ASP SEQRES 15 A 489 MET PRO GLU PRO LEU VAL LEU PRO GLY CYS VAL PRO LEU SEQRES 16 A 489 HIS GLY LYS ASP PHE VAL ASP PRO ALA GLN ASP ARG GLN SEQRES 17 A 489 ASP GLN ALA TYR HIS VAL LEU LEU ASP HIS VAL LYS ARG SEQRES 18 A 489 TYR VAL LEU ALA GLU GLY ILE PHE VAL ASN THR PHE VAL SEQRES 19 A 489 ASP LEU GLU PRO GLY ALA ILE LYS THR LEU GLN THR GLU SEQRES 20 A 489 ASP PRO ASN VAL PRO PRO VAL TYR PRO VAL GLY PRO ILE SEQRES 21 A 489 ILE GLN SER GLY LEU ASP ASP ASP SER HIS GLY SER ASP SEQRES 22 A 489 CYS LEU LYS TRP LEU ASP ARG GLN PRO SER GLY SER VAL SEQRES 23 A 489 LEU PHE VAL SER PHE GLY SER GLY GLY THR LEU SER ASN SEQRES 24 A 489 GLU GLN LEU ASN GLU LEU ALA ILE GLY LEU GLU ILE SER SEQRES 25 A 489 GLY HIS ARG PHE LEU TRP VAL VAL ARG SER PRO ASN ASP SEQRES 26 A 489 HIS SER SER PHE GLY SER PHE PHE SER THR GLN SER GLN SEQRES 27 A 489 ASP ASP PRO PHE GLY PHE LEU PRO THR GLY PHE VAL ASP SEQRES 28 A 489 ARG ILE LYS ASP ARG GLY LEU LEU VAL PRO SER TRP ALA SEQRES 29 A 489 PRO GLN ILE LYS VAL LEU SER HIS GLY SER THR GLY GLY SEQRES 30 A 489 PHE LEU THR HIS CYS GLY TRP ASN SER THR LEU GLU SER SEQRES 31 A 489 ILE VAL ASN GLY VAL PRO LEU ILE VAL TRP PRO LEU TYR SEQRES 32 A 489 ALA GLU GLN ARG MET ASN ALA VAL MET LEU ASN GLN GLY SEQRES 33 A 489 LEU LYS VAL ALA LEU ARG PRO ASN ALA SER GLN ARG GLY SEQRES 34 A 489 LEU VAL GLU ALA ASP GLU ILE ALA ARG VAL VAL LYS GLU SEQRES 35 A 489 LEU MET ASP GLY ASP GLU GLY LYS LYS ALA ARG TYR LYS SEQRES 36 A 489 MET ARG GLU LEU SER ASP SER ALA LYS ARG VAL THR SER SEQRES 37 A 489 GLU ASN GLY GLU SER THR LYS LEU LEU SER GLU VAL ALA SEQRES 38 A 489 SER LYS TRP SER GLN CYS LYS SER SEQRES 1 B 489 MET ASN HIS LYS VAL HIS HIS HIS HIS HIS HIS LEU GLN SEQRES 2 B 489 GLU ASN LEU TYR PHE GLN GLY MET GLU MET GLU ALA PRO SEQRES 3 B 489 LEU ILE VAL ILE VAL PRO SER PRO GLY MET GLY HIS LEU SEQRES 4 B 489 ILE PRO LEU VAL GLU PHE ALA LYS VAL LEU VAL SER ARG SEQRES 5 B 489 PHE HIS PHE SER VAL SER LEU LEU LEU PRO THR THR ALA SEQRES 6 B 489 GLN PRO THR LYS ALA GLN THR THR LEU LEU ASN SER LEU SEQRES 7 B 489 PRO SER SER VAL SER HIS ASN PHE LEU PRO THR VAL ASP SEQRES 8 B 489 PRO ALA HIS LEU PRO ASP GLY VAL ALA HIS GLU VAL THR SEQRES 9 B 489 ILE SER LEU THR HIS ALA HIS SER LEU SER SER ILE ARG SEQRES 10 B 489 ALA ALA LEU GLY SER LEU ALA GLN GLN ALA GLN VAL VAL SEQRES 11 B 489 ALA LEU ILE THR ASP LEU PHE GLY THR GLY LEU TYR THR SEQRES 12 B 489 VAL ALA ARG ASP LEU GLY ILE PRO PRO TYR LEU TYR PHE SEQRES 13 B 489 THR SER THR ALA MET CYS LEU LEU PHE LEU PHE HIS LEU SEQRES 14 B 489 PRO LYS LEU ASP GLU THR VAL SER CYS GLU TYR ARG ASP SEQRES 15 B 489 MET PRO GLU PRO LEU VAL LEU PRO GLY CYS VAL PRO LEU SEQRES 16 B 489 HIS GLY LYS ASP PHE VAL ASP PRO ALA GLN ASP ARG GLN SEQRES 17 B 489 ASP GLN ALA TYR HIS VAL LEU LEU ASP HIS VAL LYS ARG SEQRES 18 B 489 TYR VAL LEU ALA GLU GLY ILE PHE VAL ASN THR PHE VAL SEQRES 19 B 489 ASP LEU GLU PRO GLY ALA ILE LYS THR LEU GLN THR GLU SEQRES 20 B 489 ASP PRO ASN VAL PRO PRO VAL TYR PRO VAL GLY PRO ILE SEQRES 21 B 489 ILE GLN SER GLY LEU ASP ASP ASP SER HIS GLY SER ASP SEQRES 22 B 489 CYS LEU LYS TRP LEU ASP ARG GLN PRO SER GLY SER VAL SEQRES 23 B 489 LEU PHE VAL SER PHE GLY SER GLY GLY THR LEU SER ASN SEQRES 24 B 489 GLU GLN LEU ASN GLU LEU ALA ILE GLY LEU GLU ILE SER SEQRES 25 B 489 GLY HIS ARG PHE LEU TRP VAL VAL ARG SER PRO ASN ASP SEQRES 26 B 489 HIS SER SER PHE GLY SER PHE PHE SER THR GLN SER GLN SEQRES 27 B 489 ASP ASP PRO PHE GLY PHE LEU PRO THR GLY PHE VAL ASP SEQRES 28 B 489 ARG ILE LYS ASP ARG GLY LEU LEU VAL PRO SER TRP ALA SEQRES 29 B 489 PRO GLN ILE LYS VAL LEU SER HIS GLY SER THR GLY GLY SEQRES 30 B 489 PHE LEU THR HIS CYS GLY TRP ASN SER THR LEU GLU SER SEQRES 31 B 489 ILE VAL ASN GLY VAL PRO LEU ILE VAL TRP PRO LEU TYR SEQRES 32 B 489 ALA GLU GLN ARG MET ASN ALA VAL MET LEU ASN GLN GLY SEQRES 33 B 489 LEU LYS VAL ALA LEU ARG PRO ASN ALA SER GLN ARG GLY SEQRES 34 B 489 LEU VAL GLU ALA ASP GLU ILE ALA ARG VAL VAL LYS GLU SEQRES 35 B 489 LEU MET ASP GLY ASP GLU GLY LYS LYS ALA ARG TYR LYS SEQRES 36 B 489 MET ARG GLU LEU SER ASP SER ALA LYS ARG VAL THR SER SEQRES 37 B 489 GLU ASN GLY GLU SER THR LYS LEU LEU SER GLU VAL ALA SEQRES 38 B 489 SER LYS TRP SER GLN CYS LYS SER FORMUL 3 HOH *149(H2 O) HELIX 1 AA1 GLY A 15 PHE A 33 1 19 HELIX 2 AA2 THR A 48 SER A 57 1 10 HELIX 3 AA3 ASP A 71 LEU A 75 5 5 HELIX 4 AA4 ALA A 80 SER A 92 1 13 HELIX 5 AA5 SER A 92 ALA A 107 1 16 HELIX 6 AA6 GLY A 120 LEU A 128 1 9 HELIX 7 AA7 THR A 139 VAL A 156 1 18 HELIX 8 AA8 GLU A 159 MET A 163 5 5 HELIX 9 AA9 HIS A 176 PHE A 180 5 5 HELIX 10 AB1 VAL A 181 ASP A 186 5 6 HELIX 11 AB2 ASP A 189 LYS A 200 1 12 HELIX 12 AB3 ARG A 201 ALA A 205 5 5 HELIX 13 AB4 PHE A 213 LEU A 216 5 4 HELIX 14 AB5 GLU A 217 GLU A 227 1 11 HELIX 15 AB6 ASP A 253 ARG A 260 1 8 HELIX 16 AB7 SER A 278 GLY A 293 1 16 HELIX 17 AB8 GLY A 328 ILE A 333 1 6 HELIX 18 AB9 PRO A 345 HIS A 352 1 8 HELIX 19 AC1 GLY A 363 GLY A 374 1 12 HELIX 20 AC2 GLU A 385 GLN A 395 1 11 HELIX 21 AC3 GLU A 412 ASP A 425 1 14 HELIX 22 AC4 GLY A 426 THR A 447 1 22 HELIX 23 AC5 GLY A 451 SER A 465 1 15 HELIX 24 AC6 GLY B 15 PHE B 33 1 19 HELIX 25 AC7 THR B 48 SER B 57 1 10 HELIX 26 AC8 ASP B 71 LEU B 75 5 5 HELIX 27 AC9 ALA B 80 ALA B 107 1 28 HELIX 28 AD1 GLY B 118 GLY B 120 5 3 HELIX 29 AD2 LEU B 121 LEU B 128 1 8 HELIX 30 AD3 THR B 139 HIS B 148 1 10 HELIX 31 AD4 HIS B 148 VAL B 156 1 9 HELIX 32 AD5 GLU B 159 MET B 163 5 5 HELIX 33 AD6 HIS B 176 PHE B 180 5 5 HELIX 34 AD7 VAL B 181 ASP B 186 5 6 HELIX 35 AD8 ASP B 189 LYS B 200 1 12 HELIX 36 AD9 ARG B 201 ALA B 205 5 5 HELIX 37 AE1 PHE B 213 LEU B 216 5 4 HELIX 38 AE2 GLU B 217 GLU B 227 1 11 HELIX 39 AE3 ASP B 253 ARG B 260 1 8 HELIX 40 AE4 SER B 278 GLY B 293 1 16 HELIX 41 AE5 GLY B 328 ILE B 333 1 6 HELIX 42 AE6 PRO B 345 HIS B 352 1 8 HELIX 43 AE7 GLY B 363 GLY B 374 1 12 HELIX 44 AE8 GLU B 385 GLN B 395 1 11 HELIX 45 AE9 GLU B 412 GLY B 426 1 15 HELIX 46 AF1 GLY B 426 THR B 447 1 22 HELIX 47 AF2 GLY B 451 SER B 465 1 15 SHEET 1 AA1 7 VAL A 62 PHE A 66 0 SHEET 2 AA1 7 SER A 36 LEU A 41 1 N LEU A 39 O SER A 63 SHEET 3 AA1 7 LEU A 7 VAL A 11 1 N ILE A 8 O SER A 36 SHEET 4 AA1 7 VAL A 109 THR A 114 1 O ILE A 113 N VAL A 9 SHEET 5 AA1 7 PRO A 132 PHE A 136 1 O TYR A 133 N LEU A 112 SHEET 6 AA1 7 GLY A 207 VAL A 210 1 O PHE A 209 N PHE A 136 SHEET 7 AA1 7 VAL A 234 PRO A 236 1 O TYR A 235 N ILE A 208 SHEET 1 AA2 6 GLY A 337 PRO A 341 0 SHEET 2 AA2 6 ARG A 295 VAL A 300 1 N TRP A 298 O VAL A 340 SHEET 3 AA2 6 VAL A 266 VAL A 269 1 N VAL A 269 O LEU A 297 SHEET 4 AA2 6 THR A 355 THR A 360 1 O LEU A 359 N PHE A 268 SHEET 5 AA2 6 LEU A 377 VAL A 379 1 O ILE A 378 N THR A 360 SHEET 6 AA2 6 ALA A 400 LEU A 401 1 O LEU A 401 N LEU A 377 SHEET 1 AA3 7 VAL B 62 PHE B 66 0 SHEET 2 AA3 7 SER B 36 LEU B 41 1 N LEU B 39 O SER B 63 SHEET 3 AA3 7 LEU B 7 VAL B 11 1 N ILE B 8 O SER B 36 SHEET 4 AA3 7 VAL B 109 THR B 114 1 O ILE B 113 N VAL B 9 SHEET 5 AA3 7 PRO B 132 PHE B 136 1 O TYR B 133 N LEU B 112 SHEET 6 AA3 7 GLY B 207 VAL B 210 1 O PHE B 209 N PHE B 136 SHEET 7 AA3 7 VAL B 234 PRO B 236 1 O TYR B 235 N ILE B 208 SHEET 1 AA4 6 GLY B 337 PRO B 341 0 SHEET 2 AA4 6 ARG B 295 VAL B 300 1 N TRP B 298 O VAL B 340 SHEET 3 AA4 6 VAL B 266 VAL B 269 1 N VAL B 269 O LEU B 297 SHEET 4 AA4 6 THR B 355 THR B 360 1 O LEU B 359 N PHE B 268 SHEET 5 AA4 6 LEU B 377 VAL B 379 1 O ILE B 378 N THR B 360 SHEET 6 AA4 6 ALA B 400 LEU B 401 1 O LEU B 401 N LEU B 377 CISPEP 1 GLY A 238 PRO A 239 0 -3.19 CISPEP 2 GLY B 238 PRO B 239 0 -3.27 CRYST1 91.687 94.822 115.273 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010907 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008675 0.00000