HEADER MEMBRANE PROTEIN 10-FEB-19 6JFM TITLE MITOFUSIN2 (MFN2)_T111D COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOFUSIN-2,MITOFUSIN-2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TRANSMEMBRANE GTPASE MFN2; COMPND 5 EC: 3.6.5.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, MACACA MULATTA; SOURCE 3 ORGANISM_COMMON: HUMAN, RHESUS MACAQUE; SOURCE 4 ORGANISM_TAXID: 9606, 9544; SOURCE 5 GENE: MFN2, CPRP1, KIAA0214, MFN2, EGK_00242; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MITOCHONDRIRAL FUSION, GTPASE ACTIVITY, CMT2A, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.J.LI,Y.L.CAO,J.X.FENG,Y.B.QI,S.X.MENG,J.F.YANG,Y.T.ZHONG,S.S.KANG, AUTHOR 2 X.X.CHEN,L.LAN,L.LUO,B.YU,S.D.CHEN,D.C.CHAN,J.J.HU,S.GAO REVDAT 2 22-NOV-23 6JFM 1 LINK REVDAT 1 13-NOV-19 6JFM 0 JRNL AUTH Y.J.LI,Y.L.CAO,J.X.FENG,Y.QI,S.MENG,J.F.YANG,Y.T.ZHONG, JRNL AUTH 2 S.KANG,X.CHEN,L.LAN,L.LUO,B.YU,S.CHEN,D.C.CHAN,J.HU,S.GAO JRNL TITL STRUCTURAL INSIGHTS OF HUMAN MITOFUSIN-2 INTO MITOCHONDRIAL JRNL TITL 2 FUSION AND CMT2A ONSET. JRNL REF NAT COMMUN V. 10 4914 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31664033 JRNL DOI 10.1038/S41467-019-12912-0 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 50316 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2467 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.6444 - 5.4685 0.98 2688 130 0.1703 0.1757 REMARK 3 2 5.4685 - 4.3441 0.99 2685 125 0.1447 0.2002 REMARK 3 3 4.3441 - 3.7960 0.99 2716 114 0.1476 0.1868 REMARK 3 4 3.7960 - 3.4494 0.97 2573 152 0.1588 0.2284 REMARK 3 5 3.4494 - 3.2024 0.98 2645 131 0.1788 0.2483 REMARK 3 6 3.2024 - 3.0137 0.99 2703 136 0.1838 0.2460 REMARK 3 7 3.0137 - 2.8629 0.99 2663 121 0.1892 0.2861 REMARK 3 8 2.8629 - 2.7384 1.00 2676 153 0.1849 0.2332 REMARK 3 9 2.7384 - 2.6330 1.00 2656 148 0.1918 0.2529 REMARK 3 10 2.6330 - 2.5422 0.99 2703 132 0.1908 0.2495 REMARK 3 11 2.5422 - 2.4627 0.98 2626 131 0.2002 0.2613 REMARK 3 12 2.4627 - 2.3923 0.97 2619 139 0.2095 0.2329 REMARK 3 13 2.3923 - 2.3294 0.98 2596 143 0.2047 0.2741 REMARK 3 14 2.3294 - 2.2726 0.99 2639 165 0.2050 0.2957 REMARK 3 15 2.2726 - 2.2209 0.99 2610 152 0.2183 0.2651 REMARK 3 16 2.2209 - 2.1737 1.00 2713 148 0.2178 0.2735 REMARK 3 17 2.1737 - 2.1302 0.99 2650 127 0.2216 0.2816 REMARK 3 18 2.1302 - 2.0900 0.99 2688 120 0.2185 0.2566 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6951 REMARK 3 ANGLE : 0.943 9367 REMARK 3 CHIRALITY : 0.048 1032 REMARK 3 PLANARITY : 0.006 1229 REMARK 3 DIHEDRAL : 12.131 5951 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -7.2694 -12.3214 16.5388 REMARK 3 T TENSOR REMARK 3 T11: 0.2389 T22: 0.1982 REMARK 3 T33: 0.2652 T12: -0.0035 REMARK 3 T13: -0.0221 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 0.2519 L22: 0.2332 REMARK 3 L33: 0.8423 L12: -0.0858 REMARK 3 L13: 0.2375 L23: -0.1248 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: 0.0117 S13: 0.0159 REMARK 3 S21: 0.0162 S22: -0.0025 S23: -0.0705 REMARK 3 S31: -0.0793 S32: -0.0228 S33: 0.0328 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JFM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1300010452. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97914 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50379 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 126.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.57300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6JFK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.16 M CALCIUM ACETATE 0.08 M SODIUM REMARK 280 CACODYLATE PH 6.5 14.4% (W/V) PEG 8000 20% (V/V) GLYCEROL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 63.28150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 70 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 60 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 15 REMARK 465 PRO A 16 REMARK 465 HIS A 17 REMARK 465 MET A 18 REMARK 465 GLY A 19 REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 ALA A 22 REMARK 465 GLU A 23 REMARK 465 VAL A 24 REMARK 465 GLY A 127 REMARK 465 HIS A 128 REMARK 465 THR A 129 REMARK 465 GLY A 323 REMARK 465 GLY A 324 REMARK 465 GLY A 325 REMARK 465 ALA A 326 REMARK 465 SER A 756 REMARK 465 ARG A 757 REMARK 465 GLY B 15 REMARK 465 PRO B 16 REMARK 465 HIS B 17 REMARK 465 MET B 18 REMARK 465 GLY B 19 REMARK 465 GLY B 20 REMARK 465 SER B 21 REMARK 465 ALA B 22 REMARK 465 GLU B 23 REMARK 465 HIS B 128 REMARK 465 GLU B 322 REMARK 465 GLY B 323 REMARK 465 GLY B 324 REMARK 465 GLY B 325 REMARK 465 ALA B 326 REMARK 465 ARG B 757 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 187 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OXT ACT A 901 O HOH A 1001 2.09 REMARK 500 NZ LYS A 37 O HOH A 1002 2.18 REMARK 500 OG SER B 263 O HOH B 901 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CE LYS A 154 N GLU B 65 2656 2.01 REMARK 500 NZ LYS A 154 N ALA B 64 2656 2.12 REMARK 500 NZ LYS A 154 C ALA B 64 2656 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 154 CD - CE - NZ ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 132 -168.51 -111.81 REMARK 500 ASP A 193 31.94 -88.08 REMARK 500 ARG A 400 -168.50 -111.04 REMARK 500 ASN B 131 73.65 -111.18 REMARK 500 ALA B 227 -165.88 -121.90 REMARK 500 ARG B 400 -161.13 -107.91 REMARK 500 PRO B 755 72.27 -56.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 131 CYS A 132 -149.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1134 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1135 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A1136 DISTANCE = 6.93 ANGSTROMS REMARK 525 HOH A1137 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH B1028 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH B1029 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH B1030 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH B1031 DISTANCE = 7.25 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 904 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 73 OE1 REMARK 620 2 ASP A 77 OD1 123.1 REMARK 620 3 ASP A 77 OD2 87.1 52.0 REMARK 620 4 ACT A 902 OXT 75.9 129.9 88.3 REMARK 620 5 HOH A1029 O 65.9 103.7 125.1 125.5 REMARK 620 6 HOH A1082 O 153.1 61.3 76.2 82.6 140.9 REMARK 620 7 GLU B 395 OE2 151.8 78.8 95.6 76.1 130.7 20.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 903 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 206 OG1 REMARK 620 2 GLU A 391 OE2 69.8 REMARK 620 3 GLU B 268 OE2 67.1 3.6 REMARK 620 4 HOH B1010 O 68.6 3.0 1.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 801 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 399 OD1 REMARK 620 2 GLU B 73 OE1 150.0 REMARK 620 3 ASP B 77 OD2 149.2 1.6 REMARK 620 4 HOH B 906 O 151.0 1.5 1.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 801 DBREF 6JFM A 22 400 UNP O95140 MFN2_HUMAN 22 400 DBREF 6JFM A 706 757 UNP G7MGV9 G7MGV9_MACMU 706 757 DBREF 6JFM B 22 400 UNP O95140 MFN2_HUMAN 22 400 DBREF 6JFM B 706 757 UNP G7MGV9 G7MGV9_MACMU 706 757 SEQADV 6JFM GLY A 15 UNP O95140 EXPRESSION TAG SEQADV 6JFM PRO A 16 UNP O95140 EXPRESSION TAG SEQADV 6JFM HIS A 17 UNP O95140 EXPRESSION TAG SEQADV 6JFM MET A 18 UNP O95140 EXPRESSION TAG SEQADV 6JFM GLY A 19 UNP O95140 EXPRESSION TAG SEQADV 6JFM GLY A 20 UNP O95140 EXPRESSION TAG SEQADV 6JFM SER A 21 UNP O95140 EXPRESSION TAG SEQADV 6JFM ASP A 111 UNP O95140 THR 111 ENGINEERED MUTATION SEQADV 6JFM GLY B 15 UNP O95140 EXPRESSION TAG SEQADV 6JFM PRO B 16 UNP O95140 EXPRESSION TAG SEQADV 6JFM HIS B 17 UNP O95140 EXPRESSION TAG SEQADV 6JFM MET B 18 UNP O95140 EXPRESSION TAG SEQADV 6JFM GLY B 19 UNP O95140 EXPRESSION TAG SEQADV 6JFM GLY B 20 UNP O95140 EXPRESSION TAG SEQADV 6JFM SER B 21 UNP O95140 EXPRESSION TAG SEQADV 6JFM ASP B 111 UNP O95140 THR 111 ENGINEERED MUTATION SEQRES 1 A 438 GLY PRO HIS MET GLY GLY SER ALA GLU VAL ASN ALA SER SEQRES 2 A 438 PRO LEU LYS HIS PHE VAL THR ALA LYS LYS LYS ILE ASN SEQRES 3 A 438 GLY ILE PHE GLU GLN LEU GLY ALA TYR ILE GLN GLU SER SEQRES 4 A 438 ALA THR PHE LEU GLU ASP THR TYR ARG ASN ALA GLU LEU SEQRES 5 A 438 ASP PRO VAL THR THR GLU GLU GLN VAL LEU ASP VAL LYS SEQRES 6 A 438 GLY TYR LEU SER LYS VAL ARG GLY ILE SER GLU VAL LEU SEQRES 7 A 438 ALA ARG ARG HIS MET LYS VAL ALA PHE PHE GLY ARG THR SEQRES 8 A 438 SER ASN GLY LYS SER ASP VAL ILE ASN ALA MET LEU TRP SEQRES 9 A 438 ASP LYS VAL LEU PRO SER GLY ILE GLY HIS THR THR ASN SEQRES 10 A 438 CYS PHE LEU ARG VAL GLU GLY THR ASP GLY HIS GLU ALA SEQRES 11 A 438 PHE LEU LEU THR GLU GLY SER GLU GLU LYS ARG SER ALA SEQRES 12 A 438 LYS THR VAL ASN GLN LEU ALA HIS ALA LEU HIS GLN ASP SEQRES 13 A 438 LYS GLN LEU HIS ALA GLY SER LEU VAL SER VAL MET TRP SEQRES 14 A 438 PRO ASN SER LYS CYS PRO LEU LEU LYS ASP ASP LEU VAL SEQRES 15 A 438 LEU MET ASP SER PRO GLY ILE ASP VAL THR THR GLU LEU SEQRES 16 A 438 ASP SER TRP ILE ASP LYS PHE CYS LEU ASP ALA ASP VAL SEQRES 17 A 438 PHE VAL LEU VAL ALA ASN SER GLU SER THR LEU MET GLN SEQRES 18 A 438 THR GLU LYS HIS PHE PHE HIS LYS VAL SER GLU ARG LEU SEQRES 19 A 438 SER ARG PRO ASN ILE PHE ILE LEU ASN ASN ARG TRP ASP SEQRES 20 A 438 ALA SER ALA SER GLU PRO GLU TYR MET GLU GLU VAL ARG SEQRES 21 A 438 ARG GLN HIS MET GLU ARG CYS THR SER PHE LEU VAL ASP SEQRES 22 A 438 GLU LEU GLY VAL VAL ASP ARG SER GLN ALA GLY ASP ARG SEQRES 23 A 438 ILE PHE PHE VAL SER ALA LYS GLU VAL LEU ASN ALA ARG SEQRES 24 A 438 ILE GLN LYS ALA GLN GLY MET PRO GLU GLY GLY GLY ALA SEQRES 25 A 438 LEU ALA GLU GLY PHE GLN VAL ARG MET PHE GLU PHE GLN SEQRES 26 A 438 ASN PHE GLU ARG ARG PHE GLU GLU CYS ILE SER GLN SER SEQRES 27 A 438 ALA VAL LYS THR LYS PHE GLU GLN HIS THR VAL ARG ALA SEQRES 28 A 438 LYS GLN ILE ALA GLU ALA VAL ARG LEU ILE MET ASP SER SEQRES 29 A 438 LEU HIS MET ALA ALA ARG GLU GLN GLN VAL TYR CYS GLU SEQRES 30 A 438 GLU MET ARG GLU GLU ARG GLN ASP ARG THR ARG GLU ASN SEQRES 31 A 438 LEU GLU GLN GLU ILE ALA ALA MET ASN LYS LYS ILE GLU SEQRES 32 A 438 VAL LEU ASP SER LEU GLN SER LYS ALA LYS LEU LEU ARG SEQRES 33 A 438 ASN LYS ALA GLY TRP LEU ASP SER GLU LEU ASN MET PHE SEQRES 34 A 438 THR HIS GLN TYR LEU GLN PRO SER ARG SEQRES 1 B 438 GLY PRO HIS MET GLY GLY SER ALA GLU VAL ASN ALA SER SEQRES 2 B 438 PRO LEU LYS HIS PHE VAL THR ALA LYS LYS LYS ILE ASN SEQRES 3 B 438 GLY ILE PHE GLU GLN LEU GLY ALA TYR ILE GLN GLU SER SEQRES 4 B 438 ALA THR PHE LEU GLU ASP THR TYR ARG ASN ALA GLU LEU SEQRES 5 B 438 ASP PRO VAL THR THR GLU GLU GLN VAL LEU ASP VAL LYS SEQRES 6 B 438 GLY TYR LEU SER LYS VAL ARG GLY ILE SER GLU VAL LEU SEQRES 7 B 438 ALA ARG ARG HIS MET LYS VAL ALA PHE PHE GLY ARG THR SEQRES 8 B 438 SER ASN GLY LYS SER ASP VAL ILE ASN ALA MET LEU TRP SEQRES 9 B 438 ASP LYS VAL LEU PRO SER GLY ILE GLY HIS THR THR ASN SEQRES 10 B 438 CYS PHE LEU ARG VAL GLU GLY THR ASP GLY HIS GLU ALA SEQRES 11 B 438 PHE LEU LEU THR GLU GLY SER GLU GLU LYS ARG SER ALA SEQRES 12 B 438 LYS THR VAL ASN GLN LEU ALA HIS ALA LEU HIS GLN ASP SEQRES 13 B 438 LYS GLN LEU HIS ALA GLY SER LEU VAL SER VAL MET TRP SEQRES 14 B 438 PRO ASN SER LYS CYS PRO LEU LEU LYS ASP ASP LEU VAL SEQRES 15 B 438 LEU MET ASP SER PRO GLY ILE ASP VAL THR THR GLU LEU SEQRES 16 B 438 ASP SER TRP ILE ASP LYS PHE CYS LEU ASP ALA ASP VAL SEQRES 17 B 438 PHE VAL LEU VAL ALA ASN SER GLU SER THR LEU MET GLN SEQRES 18 B 438 THR GLU LYS HIS PHE PHE HIS LYS VAL SER GLU ARG LEU SEQRES 19 B 438 SER ARG PRO ASN ILE PHE ILE LEU ASN ASN ARG TRP ASP SEQRES 20 B 438 ALA SER ALA SER GLU PRO GLU TYR MET GLU GLU VAL ARG SEQRES 21 B 438 ARG GLN HIS MET GLU ARG CYS THR SER PHE LEU VAL ASP SEQRES 22 B 438 GLU LEU GLY VAL VAL ASP ARG SER GLN ALA GLY ASP ARG SEQRES 23 B 438 ILE PHE PHE VAL SER ALA LYS GLU VAL LEU ASN ALA ARG SEQRES 24 B 438 ILE GLN LYS ALA GLN GLY MET PRO GLU GLY GLY GLY ALA SEQRES 25 B 438 LEU ALA GLU GLY PHE GLN VAL ARG MET PHE GLU PHE GLN SEQRES 26 B 438 ASN PHE GLU ARG ARG PHE GLU GLU CYS ILE SER GLN SER SEQRES 27 B 438 ALA VAL LYS THR LYS PHE GLU GLN HIS THR VAL ARG ALA SEQRES 28 B 438 LYS GLN ILE ALA GLU ALA VAL ARG LEU ILE MET ASP SER SEQRES 29 B 438 LEU HIS MET ALA ALA ARG GLU GLN GLN VAL TYR CYS GLU SEQRES 30 B 438 GLU MET ARG GLU GLU ARG GLN ASP ARG THR ARG GLU ASN SEQRES 31 B 438 LEU GLU GLN GLU ILE ALA ALA MET ASN LYS LYS ILE GLU SEQRES 32 B 438 VAL LEU ASP SER LEU GLN SER LYS ALA LYS LEU LEU ARG SEQRES 33 B 438 ASN LYS ALA GLY TRP LEU ASP SER GLU LEU ASN MET PHE SEQRES 34 B 438 THR HIS GLN TYR LEU GLN PRO SER ARG HET ACT A 901 4 HET ACT A 902 4 HET CA A 903 1 HET CA A 904 1 HET CA B 801 1 HETNAM ACT ACETATE ION HETNAM CA CALCIUM ION FORMUL 3 ACT 2(C2 H3 O2 1-) FORMUL 5 CA 3(CA 2+) FORMUL 8 HOH *268(H2 O) HELIX 1 AA1 PRO A 28 ARG A 62 1 35 HELIX 2 AA2 THR A 71 ARG A 95 1 25 HELIX 3 AA3 ARG A 104 ASN A 107 5 4 HELIX 4 AA4 GLY A 108 TRP A 118 1 11 HELIX 5 AA5 THR A 159 ASP A 170 1 12 HELIX 6 AA6 CYS A 188 ASP A 193 1 6 HELIX 7 AA7 SER A 211 CYS A 217 1 7 HELIX 8 AA8 MET A 234 LEU A 248 1 15 HELIX 9 AA9 ARG A 259 SER A 265 5 7 HELIX 10 AB1 GLU A 266 ASP A 287 1 22 HELIX 11 AB2 ASP A 293 ASP A 299 5 7 HELIX 12 AB3 SER A 305 GLN A 318 1 14 HELIX 13 AB4 GLY A 330 GLN A 398 1 69 HELIX 14 AB5 ASN A 709 LEU A 753 1 45 HELIX 15 AB6 LEU B 29 ASN B 63 1 35 HELIX 16 AB7 THR B 71 ARG B 95 1 25 HELIX 17 AB8 THR B 105 ASN B 107 5 3 HELIX 18 AB9 GLY B 108 TRP B 118 1 11 HELIX 19 AC1 THR B 159 ASP B 170 1 12 HELIX 20 AC2 CYS B 188 ASP B 193 1 6 HELIX 21 AC3 SER B 211 CYS B 217 1 7 HELIX 22 AC4 MET B 234 LEU B 248 1 15 HELIX 23 AC5 ARG B 259 SER B 265 5 7 HELIX 24 AC6 GLU B 266 ASP B 287 1 22 HELIX 25 AC7 ASP B 293 ASP B 299 5 7 HELIX 26 AC8 SER B 305 GLY B 319 1 15 HELIX 27 AC9 GLY B 330 GLN B 398 1 69 HELIX 28 AD1 ASN B 709 LEU B 753 1 45 SHEET 1 AA1 9 LYS A 154 SER A 156 0 SHEET 2 AA1 9 PHE A 145 THR A 148 -1 N LEU A 146 O ARG A 155 SHEET 3 AA1 9 LEU A 178 PRO A 184 -1 O SER A 180 N LEU A 147 SHEET 4 AA1 9 PHE A 133 THR A 139 1 N GLU A 137 O TRP A 183 SHEET 5 AA1 9 LEU A 195 ASP A 199 -1 O LEU A 197 N VAL A 136 SHEET 6 AA1 9 MET A 97 PHE A 102 1 N VAL A 99 O MET A 198 SHEET 7 AA1 9 VAL A 222 ASN A 228 1 O VAL A 224 N PHE A 102 SHEET 8 AA1 9 ASN A 252 ASN A 258 1 O ASN A 252 N PHE A 223 SHEET 9 AA1 9 ILE A 301 PHE A 303 1 O PHE A 302 N ASN A 257 SHEET 1 AA2 9 ARG B 155 SER B 156 0 SHEET 2 AA2 9 PHE B 145 LEU B 147 -1 N LEU B 146 O ARG B 155 SHEET 3 AA2 9 LEU B 178 PRO B 184 -1 O MET B 182 N PHE B 145 SHEET 4 AA2 9 PHE B 133 THR B 139 1 N GLU B 137 O TRP B 183 SHEET 5 AA2 9 LEU B 195 ASP B 199 -1 O LEU B 197 N VAL B 136 SHEET 6 AA2 9 MET B 97 GLY B 103 1 N VAL B 99 O MET B 198 SHEET 7 AA2 9 VAL B 222 ASN B 228 1 O VAL B 224 N PHE B 102 SHEET 8 AA2 9 ASN B 252 ASN B 258 1 O LEU B 256 N LEU B 225 SHEET 9 AA2 9 ILE B 301 PHE B 303 1 O PHE B 302 N ASN B 257 LINK NZ LYS A 154 N GLU B 65 1555 2656 1.36 LINK OE1 GLU A 73 CA CA A 904 1555 1555 2.39 LINK OD1 ASP A 77 CA CA A 904 1555 1555 2.47 LINK OD2 ASP A 77 CA CA A 904 1555 1555 2.51 LINK OG1 THR A 206 CA CA A 903 1555 1656 2.79 LINK OE2 GLU A 391 CA CA A 903 1555 1555 2.89 LINK OD1 ASP A 399 CA CA B 801 1555 2455 2.67 LINK OXT ACT A 902 CA CA A 904 1555 1555 2.88 LINK CA CA A 903 OE2 GLU B 268 1555 1555 2.64 LINK CA CA A 903 O HOH B1010 1555 1555 2.49 LINK CA CA A 904 O HOH A1029 1555 1555 2.38 LINK CA CA A 904 O HOH A1082 1555 1555 3.12 LINK CA CA A 904 OE2 GLU B 395 2546 1555 2.72 LINK OE1 GLU B 73 CA CA B 801 1555 1555 2.92 LINK OD2 ASP B 77 CA CA B 801 1555 1555 2.50 LINK CA CA B 801 O HOH B 906 1555 1555 2.51 SITE 1 AC1 5 HIS A 31 GLN A 751 HOH A1001 HOH B 955 SITE 2 AC1 5 HOH B1006 SITE 1 AC2 2 GLU A 73 CA A 904 SITE 1 AC3 4 THR A 206 GLU A 391 GLU B 268 HOH B1010 SITE 1 AC4 4 GLU A 73 ASP A 77 ACT A 902 HOH A1029 SITE 1 AC5 3 GLU B 73 ASP B 77 HOH B 906 CRYST1 44.437 126.563 79.972 90.00 102.46 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022504 0.000000 0.004971 0.00000 SCALE2 0.000000 0.007901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012806 0.00000