data_6JO2 # _entry.id 6JO2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6JO2 pdb_00006jo2 10.2210/pdb6jo2/pdb WWPDB D_1300011455 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details '6IRI and This protein are the ferredoxin proteins in T. elongatus' _pdbx_database_related.db_id 6IRI _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6JO2 _pdbx_database_status.recvd_initial_deposition_date 2019-03-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Motomura, T.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-9646-7347 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country NE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biochim Biophys Acta Bioenerg' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1879-2650 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 1860 _citation.language ? _citation.page_first 148084 _citation.page_last 148084 _citation.title 'An alternative plant-like cyanobacterial ferredoxin with unprecedented structural and functional properties.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbabio.2019.148084 _citation.pdbx_database_id_PubMed 31520614 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Motomura, T.' 1 ? primary 'Zuccarello, L.' 2 ? primary 'Setif, P.' 3 ? primary 'Boussac, A.' 4 ? primary 'Umena, Y.' 5 ? primary 'Lemaire, D.' 6 ? primary 'Tripathy, J.N.' 7 ? primary 'Sugiura, M.' 8 ? primary 'Hienerwadel, R.' 9 ? primary 'Shen, J.R.' 10 ? primary 'Berthomieu, C.' 11 ? # _cell.length_a 56.172 _cell.length_b 53.222 _cell.length_c 32.293 _cell.angle_alpha 90.000 _cell.angle_beta 92.670 _cell.angle_gamma 90.000 _cell.entry_id 6JO2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 6JO2 _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Ferredoxin-1 10722.764 1 ? ? ? ? 2 non-polymer syn BENZAMIDINE 120.152 2 ? ? ? ? 3 non-polymer syn 'FE2/S2 (INORGANIC) CLUSTER' 175.820 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 96 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ferredoxin I' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVA YPRSDCKILTNQEEELY ; _entity_poly.pdbx_seq_one_letter_code_can ;ATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVA YPRSDCKILTNQEEELY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 TYR n 1 4 LYS n 1 5 VAL n 1 6 THR n 1 7 LEU n 1 8 VAL n 1 9 ARG n 1 10 PRO n 1 11 ASP n 1 12 GLY n 1 13 SER n 1 14 GLU n 1 15 THR n 1 16 THR n 1 17 ILE n 1 18 ASP n 1 19 VAL n 1 20 PRO n 1 21 GLU n 1 22 ASP n 1 23 GLU n 1 24 TYR n 1 25 ILE n 1 26 LEU n 1 27 ASP n 1 28 VAL n 1 29 ALA n 1 30 GLU n 1 31 GLU n 1 32 GLN n 1 33 GLY n 1 34 LEU n 1 35 ASP n 1 36 LEU n 1 37 PRO n 1 38 PHE n 1 39 SER n 1 40 CYS n 1 41 ARG n 1 42 ALA n 1 43 GLY n 1 44 ALA n 1 45 CYS n 1 46 SER n 1 47 THR n 1 48 CYS n 1 49 ALA n 1 50 GLY n 1 51 LYS n 1 52 LEU n 1 53 LEU n 1 54 GLU n 1 55 GLY n 1 56 GLU n 1 57 VAL n 1 58 ASP n 1 59 GLN n 1 60 SER n 1 61 ASP n 1 62 GLN n 1 63 SER n 1 64 PHE n 1 65 LEU n 1 66 ASP n 1 67 ASP n 1 68 ASP n 1 69 GLN n 1 70 ILE n 1 71 GLU n 1 72 LYS n 1 73 GLY n 1 74 PHE n 1 75 VAL n 1 76 LEU n 1 77 THR n 1 78 CYS n 1 79 VAL n 1 80 ALA n 1 81 TYR n 1 82 PRO n 1 83 ARG n 1 84 SER n 1 85 ASP n 1 86 CYS n 1 87 LYS n 1 88 ILE n 1 89 LEU n 1 90 THR n 1 91 ASN n 1 92 GLN n 1 93 GLU n 1 94 GLU n 1 95 GLU n 1 96 LEU n 1 97 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 97 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'petF1, petF, tsl1009' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermosynechococcus elongatus BP-1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 197221 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Thermosynechococcus elongatus BP-1' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 197221 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FER_THEEB _struct_ref.pdbx_db_accession P0A3C9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVA YPRSDCKILTNQEEELY ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6JO2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 97 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A3C9 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 98 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 98 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BEN non-polymer . BENZAMIDINE ? 'C7 H8 N2' 120.152 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FES non-polymer . 'FE2/S2 (INORGANIC) CLUSTER' ? 'Fe2 S2' 175.820 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6JO2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.30 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;100 mM Sodium Citrate (pH 6.5) 2.5 M ammonium Sulfate 0.2%(w/v) benzamidine hydrochloride 3%(w/v) 1,6-hexanediol ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-02-09 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6JO2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 38.610 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13408 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.30 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.04 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.55 1.64 ? 2.90 ? ? ? ? 1983 90.1 ? ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? ? ? ? ? ? ? 1 1 ? ? 1.64 1.75 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 ? ? 1.75 1.90 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 ? ? 1.90 2.08 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 ? ? 2.08 2.32 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 ? ? 2.32 2.68 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 6 1 ? ? 2.68 3.27 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 7 1 ? ? 3.27 4.61 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 8 1 ? ? 4.61 38.610 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 9 1 ? ? # _refine.entry_id 6JO2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.5500 _refine.ls_d_res_low 38.6100 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.5100 _refine.ls_number_reflns_obs 12752 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1349 _refine.ls_R_factor_R_work 0.1327 _refine.ls_wR_factor_R_work 0.1339 _refine.ls_R_factor_R_free 0.1759 _refine.ls_wR_factor_R_free 0.1783 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_number_reflns_R_free 655 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 14.9380 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.6700 _refine.aniso_B[2][2] 1.7400 _refine.aniso_B[3][3] -1.0100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.5900 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9710 _refine.correlation_coeff_Fo_to_Fc_free 0.9570 _refine.overall_SU_R_Cruickshank_DPI 0.1031 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free 0.0771 _refine.pdbx_overall_ESU_R 0.1030 _refine.pdbx_overall_ESU_R_Free 0.0770 _refine.overall_SU_ML 0.0530 _refine.overall_SU_B 3.3210 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 5AUI _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8757 _refine.B_iso_max 54.460 _refine.B_iso_min 4.260 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.5500 _refine_hist.d_res_low 38.6100 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 872 _refine_hist.pdbx_number_residues_total 97 _refine_hist.pdbx_B_iso_mean_ligand 23.68 _refine_hist.pdbx_B_iso_mean_solvent 29.39 _refine_hist.pdbx_number_atoms_protein 748 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 895 0.011 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 801 0.000 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1225 1.408 1.984 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 1871 1.011 2.983 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 122 6.920 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 45 38.714 26.667 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 154 13.263 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 4 25.090 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 138 0.118 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1058 0.012 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 182 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 1696 5.493 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 23 32.914 5.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 1744 8.663 5.000 ? ? # _refine_ls_shell.d_res_high 1.5480 _refine_ls_shell.d_res_low 1.5880 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 86.3000 _refine_ls_shell.number_reflns_R_work 820 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2170 _refine_ls_shell.R_factor_R_free 0.3430 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 24 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.number_reflns_all 844 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 6JO2 _struct.title 'Ferredoxin I from Thermosynechococcus elongatus' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6JO2 _struct_keywords.text 'Photosynthesis, ELECTRON TRANSPORT' _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 24 ? GLN A 32 ? TYR A 25 GLN A 33 1 ? 9 HELX_P HELX_P2 AA2 ASP A 66 ? LYS A 72 ? ASP A 67 LYS A 73 1 ? 7 HELX_P HELX_P3 AA3 CYS A 78 ? ALA A 80 ? CYS A 79 ALA A 81 5 ? 3 HELX_P HELX_P4 AA4 GLN A 92 ? TYR A 97 ? GLN A 93 TYR A 98 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 40 SG ? ? ? 1_555 D FES . FE1 ? ? A CYS 41 A FES 103 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc2 metalc ? ? A CYS 45 SG ? ? ? 1_555 D FES . FE1 ? ? A CYS 46 A FES 103 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc3 metalc ? ? A CYS 48 SG ? ? ? 1_555 D FES . FE2 ? ? A CYS 49 A FES 103 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc4 metalc ? ? A CYS 78 SG ? ? ? 1_555 D FES . FE2 ? ? A CYS 79 A FES 103 1_555 ? ? ? ? ? ? ? 2.310 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 14 ? PRO A 20 ? GLU A 15 PRO A 21 AA1 2 THR A 2 ? VAL A 8 ? THR A 3 VAL A 9 AA1 3 CYS A 86 ? LEU A 89 ? CYS A 87 LEU A 90 AA1 4 ALA A 49 ? GLU A 54 ? ALA A 50 GLU A 55 AA1 5 PHE A 74 ? LEU A 76 ? PHE A 75 LEU A 77 AA2 1 VAL A 57 ? ASP A 58 ? VAL A 58 ASP A 59 AA2 2 TYR A 81 ? PRO A 82 ? TYR A 82 PRO A 83 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 19 ? O VAL A 20 N TYR A 3 ? N TYR A 4 AA1 2 3 N THR A 6 ? N THR A 7 O ILE A 88 ? O ILE A 89 AA1 3 4 O LEU A 89 ? O LEU A 90 N LYS A 51 ? N LYS A 52 AA1 4 5 N GLY A 50 ? N GLY A 51 O VAL A 75 ? O VAL A 76 AA2 1 2 N ASP A 58 ? N ASP A 59 O TYR A 81 ? O TYR A 82 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BEN 101 ? 8 'binding site for residue BEN A 101' AC2 Software A BEN 102 ? 7 'binding site for residue BEN A 102' AC3 Software A FES 103 ? 8 'binding site for residue FES A 103' AC4 Software A SO4 104 ? 7 'binding site for residue SO4 A 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 THR A 15 ? THR A 16 . ? 1_555 ? 2 AC1 8 GLN A 32 ? GLN A 33 . ? 1_555 ? 3 AC1 8 LEU A 34 ? LEU A 35 . ? 1_555 ? 4 AC1 8 GLN A 62 ? GLN A 63 . ? 1_554 ? 5 AC1 8 SER A 63 ? SER A 64 . ? 1_554 ? 6 AC1 8 PHE A 64 ? PHE A 65 . ? 1_554 ? 7 AC1 8 LEU A 65 ? LEU A 66 . ? 1_554 ? 8 AC1 8 SO4 E . ? SO4 A 104 . ? 1_555 ? 9 AC2 7 ARG A 9 ? ARG A 10 . ? 2_455 ? 10 AC2 7 PRO A 10 ? PRO A 11 . ? 2_455 ? 11 AC2 7 ASP A 11 ? ASP A 12 . ? 2_455 ? 12 AC2 7 SER A 13 ? SER A 14 . ? 2_455 ? 13 AC2 7 GLU A 93 ? GLU A 94 . ? 1_555 ? 14 AC2 7 TYR A 97 ? TYR A 98 . ? 1_555 ? 15 AC2 7 SO4 E . ? SO4 A 104 . ? 2_455 ? 16 AC3 8 SER A 39 ? SER A 40 . ? 1_555 ? 17 AC3 8 CYS A 40 ? CYS A 41 . ? 1_555 ? 18 AC3 8 ARG A 41 ? ARG A 42 . ? 1_555 ? 19 AC3 8 GLY A 43 ? GLY A 44 . ? 1_555 ? 20 AC3 8 ALA A 44 ? ALA A 45 . ? 1_555 ? 21 AC3 8 CYS A 45 ? CYS A 46 . ? 1_555 ? 22 AC3 8 CYS A 48 ? CYS A 49 . ? 1_555 ? 23 AC3 8 CYS A 78 ? CYS A 79 . ? 1_555 ? 24 AC4 7 BEN B . ? BEN A 101 . ? 1_555 ? 25 AC4 7 BEN C . ? BEN A 102 . ? 2_455 ? 26 AC4 7 HOH F . ? HOH A 202 . ? 1_555 ? 27 AC4 7 HOH F . ? HOH A 203 . ? 1_555 ? 28 AC4 7 HOH F . ? HOH A 204 . ? 1_555 ? 29 AC4 7 HOH F . ? HOH A 211 . ? 1_555 ? 30 AC4 7 HOH F . ? HOH A 240 . ? 1_555 ? # _atom_sites.entry_id 6JO2 _atom_sites.fract_transf_matrix[1][1] 0.017802 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000831 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018789 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031000 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 2 2 ALA ALA A . n A 1 2 THR 2 3 3 THR THR A . n A 1 3 TYR 3 4 4 TYR TYR A . n A 1 4 LYS 4 5 5 LYS LYS A . n A 1 5 VAL 5 6 6 VAL VAL A . n A 1 6 THR 6 7 7 THR THR A . n A 1 7 LEU 7 8 8 LEU LEU A . n A 1 8 VAL 8 9 9 VAL VAL A . n A 1 9 ARG 9 10 10 ARG ARG A . n A 1 10 PRO 10 11 11 PRO PRO A . n A 1 11 ASP 11 12 12 ASP ASP A . n A 1 12 GLY 12 13 13 GLY GLY A . n A 1 13 SER 13 14 14 SER SER A . n A 1 14 GLU 14 15 15 GLU GLU A . n A 1 15 THR 15 16 16 THR THR A . n A 1 16 THR 16 17 17 THR THR A . n A 1 17 ILE 17 18 18 ILE ILE A . n A 1 18 ASP 18 19 19 ASP ASP A . n A 1 19 VAL 19 20 20 VAL VAL A . n A 1 20 PRO 20 21 21 PRO PRO A . n A 1 21 GLU 21 22 22 GLU GLU A . n A 1 22 ASP 22 23 23 ASP ASP A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 TYR 24 25 25 TYR TYR A . n A 1 25 ILE 25 26 26 ILE ILE A . n A 1 26 LEU 26 27 27 LEU LEU A . n A 1 27 ASP 27 28 28 ASP ASP A . n A 1 28 VAL 28 29 29 VAL VAL A . n A 1 29 ALA 29 30 30 ALA ALA A . n A 1 30 GLU 30 31 31 GLU GLU A . n A 1 31 GLU 31 32 32 GLU GLU A . n A 1 32 GLN 32 33 33 GLN GLN A . n A 1 33 GLY 33 34 34 GLY GLY A . n A 1 34 LEU 34 35 35 LEU LEU A . n A 1 35 ASP 35 36 36 ASP ASP A . n A 1 36 LEU 36 37 37 LEU LEU A . n A 1 37 PRO 37 38 38 PRO PRO A . n A 1 38 PHE 38 39 39 PHE PHE A . n A 1 39 SER 39 40 40 SER SER A . n A 1 40 CYS 40 41 41 CYS CYS A . n A 1 41 ARG 41 42 42 ARG ARG A . n A 1 42 ALA 42 43 43 ALA ALA A . n A 1 43 GLY 43 44 44 GLY GLY A . n A 1 44 ALA 44 45 45 ALA ALA A . n A 1 45 CYS 45 46 46 CYS CYS A . n A 1 46 SER 46 47 47 SER SER A . n A 1 47 THR 47 48 48 THR THR A . n A 1 48 CYS 48 49 49 CYS CYS A . n A 1 49 ALA 49 50 50 ALA ALA A . n A 1 50 GLY 50 51 51 GLY GLY A . n A 1 51 LYS 51 52 52 LYS LYS A . n A 1 52 LEU 52 53 53 LEU LEU A . n A 1 53 LEU 53 54 54 LEU LEU A . n A 1 54 GLU 54 55 55 GLU GLU A . n A 1 55 GLY 55 56 56 GLY GLY A . n A 1 56 GLU 56 57 57 GLU GLU A . n A 1 57 VAL 57 58 58 VAL VAL A . n A 1 58 ASP 58 59 59 ASP ASP A . n A 1 59 GLN 59 60 60 GLN GLN A . n A 1 60 SER 60 61 61 SER SER A . n A 1 61 ASP 61 62 62 ASP ASP A . n A 1 62 GLN 62 63 63 GLN GLN A . n A 1 63 SER 63 64 64 SER SER A . n A 1 64 PHE 64 65 65 PHE PHE A . n A 1 65 LEU 65 66 66 LEU LEU A . n A 1 66 ASP 66 67 67 ASP ASP A . n A 1 67 ASP 67 68 68 ASP ASP A . n A 1 68 ASP 68 69 69 ASP ASP A . n A 1 69 GLN 69 70 70 GLN GLN A . n A 1 70 ILE 70 71 71 ILE ILE A . n A 1 71 GLU 71 72 72 GLU GLU A . n A 1 72 LYS 72 73 73 LYS LYS A . n A 1 73 GLY 73 74 74 GLY GLY A . n A 1 74 PHE 74 75 75 PHE PHE A . n A 1 75 VAL 75 76 76 VAL VAL A . n A 1 76 LEU 76 77 77 LEU LEU A . n A 1 77 THR 77 78 78 THR THR A . n A 1 78 CYS 78 79 79 CYS CYS A . n A 1 79 VAL 79 80 80 VAL VAL A . n A 1 80 ALA 80 81 81 ALA ALA A . n A 1 81 TYR 81 82 82 TYR TYR A . n A 1 82 PRO 82 83 83 PRO PRO A . n A 1 83 ARG 83 84 84 ARG ARG A . n A 1 84 SER 84 85 85 SER SER A . n A 1 85 ASP 85 86 86 ASP ASP A . n A 1 86 CYS 86 87 87 CYS CYS A . n A 1 87 LYS 87 88 88 LYS LYS A . n A 1 88 ILE 88 89 89 ILE ILE A . n A 1 89 LEU 89 90 90 LEU LEU A . n A 1 90 THR 90 91 91 THR THR A . n A 1 91 ASN 91 92 92 ASN ASN A . n A 1 92 GLN 92 93 93 GLN GLN A . n A 1 93 GLU 93 94 94 GLU GLU A . n A 1 94 GLU 94 95 95 GLU GLU A . n A 1 95 GLU 95 96 96 GLU GLU A . n A 1 96 LEU 96 97 97 LEU LEU A . n A 1 97 TYR 97 98 98 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BEN 1 101 1 BEN BAM A . C 2 BEN 1 102 2 BEN BAM A . D 3 FES 1 103 1 FES FES A . E 4 SO4 1 104 1 SO4 SO4 A . F 5 HOH 1 201 59 HOH HOH A . F 5 HOH 2 202 72 HOH HOH A . F 5 HOH 3 203 89 HOH HOH A . F 5 HOH 4 204 57 HOH HOH A . F 5 HOH 5 205 82 HOH HOH A . F 5 HOH 6 206 46 HOH HOH A . F 5 HOH 7 207 47 HOH HOH A . F 5 HOH 8 208 15 HOH HOH A . F 5 HOH 9 209 71 HOH HOH A . F 5 HOH 10 210 26 HOH HOH A . F 5 HOH 11 211 76 HOH HOH A . F 5 HOH 12 212 41 HOH HOH A . F 5 HOH 13 213 27 HOH HOH A . F 5 HOH 14 214 18 HOH HOH A . F 5 HOH 15 215 30 HOH HOH A . F 5 HOH 16 216 32 HOH HOH A . F 5 HOH 17 217 65 HOH HOH A . F 5 HOH 18 218 81 HOH HOH A . F 5 HOH 19 219 14 HOH HOH A . F 5 HOH 20 220 75 HOH HOH A . F 5 HOH 21 221 13 HOH HOH A . F 5 HOH 22 222 19 HOH HOH A . F 5 HOH 23 223 31 HOH HOH A . F 5 HOH 24 224 22 HOH HOH A . F 5 HOH 25 225 64 HOH HOH A . F 5 HOH 26 226 40 HOH HOH A . F 5 HOH 27 227 17 HOH HOH A . F 5 HOH 28 228 66 HOH HOH A . F 5 HOH 29 229 54 HOH HOH A . F 5 HOH 30 230 37 HOH HOH A . F 5 HOH 31 231 85 HOH HOH A . F 5 HOH 32 232 1 HOH HOH A . F 5 HOH 33 233 52 HOH HOH A . F 5 HOH 34 234 5 HOH HOH A . F 5 HOH 35 235 62 HOH HOH A . F 5 HOH 36 236 53 HOH HOH A . F 5 HOH 37 237 20 HOH HOH A . F 5 HOH 38 238 2 HOH HOH A . F 5 HOH 39 239 60 HOH HOH A . F 5 HOH 40 240 25 HOH HOH A . F 5 HOH 41 241 12 HOH HOH A . F 5 HOH 42 242 92 HOH HOH A . F 5 HOH 43 243 87 HOH HOH A . F 5 HOH 44 244 34 HOH HOH A . F 5 HOH 45 245 16 HOH HOH A . F 5 HOH 46 246 58 HOH HOH A . F 5 HOH 47 247 51 HOH HOH A . F 5 HOH 48 248 3 HOH HOH A . F 5 HOH 49 249 48 HOH HOH A . F 5 HOH 50 250 50 HOH HOH A . F 5 HOH 51 251 61 HOH HOH A . F 5 HOH 52 252 28 HOH HOH A . F 5 HOH 53 253 33 HOH HOH A . F 5 HOH 54 254 10 HOH HOH A . F 5 HOH 55 255 38 HOH HOH A . F 5 HOH 56 256 77 HOH HOH A . F 5 HOH 57 257 21 HOH HOH A . F 5 HOH 58 258 29 HOH HOH A . F 5 HOH 59 259 69 HOH HOH A . F 5 HOH 60 260 9 HOH HOH A . F 5 HOH 61 261 23 HOH HOH A . F 5 HOH 62 262 11 HOH HOH A . F 5 HOH 63 263 45 HOH HOH A . F 5 HOH 64 264 68 HOH HOH A . F 5 HOH 65 265 8 HOH HOH A . F 5 HOH 66 266 74 HOH HOH A . F 5 HOH 67 267 44 HOH HOH A . F 5 HOH 68 268 86 HOH HOH A . F 5 HOH 69 269 42 HOH HOH A . F 5 HOH 70 270 73 HOH HOH A . F 5 HOH 71 271 7 HOH HOH A . F 5 HOH 72 272 63 HOH HOH A . F 5 HOH 73 273 4 HOH HOH A . F 5 HOH 74 274 6 HOH HOH A . F 5 HOH 75 275 84 HOH HOH A . F 5 HOH 76 276 88 HOH HOH A . F 5 HOH 77 277 24 HOH HOH A . F 5 HOH 78 278 67 HOH HOH A . F 5 HOH 79 279 79 HOH HOH A . F 5 HOH 80 280 55 HOH HOH A . F 5 HOH 81 281 36 HOH HOH A . F 5 HOH 82 282 56 HOH HOH A . F 5 HOH 83 283 43 HOH HOH A . F 5 HOH 84 284 39 HOH HOH A . F 5 HOH 85 285 91 HOH HOH A . F 5 HOH 86 286 78 HOH HOH A . F 5 HOH 87 287 49 HOH HOH A . F 5 HOH 88 288 83 HOH HOH A . F 5 HOH 89 289 90 HOH HOH A . F 5 HOH 90 290 70 HOH HOH A . F 5 HOH 91 291 93 HOH HOH A . F 5 HOH 92 292 35 HOH HOH A . F 5 HOH 93 293 96 HOH HOH A . F 5 HOH 94 294 95 HOH HOH A . F 5 HOH 95 295 94 HOH HOH A . F 5 HOH 96 296 80 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 240 ? 1 MORE -16 ? 1 'SSA (A^2)' 5090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 40 ? A CYS 41 ? 1_555 FE1 ? D FES . ? A FES 103 ? 1_555 S1 ? D FES . ? A FES 103 ? 1_555 120.9 ? 2 SG ? A CYS 40 ? A CYS 41 ? 1_555 FE1 ? D FES . ? A FES 103 ? 1_555 S2 ? D FES . ? A FES 103 ? 1_555 102.7 ? 3 S1 ? D FES . ? A FES 103 ? 1_555 FE1 ? D FES . ? A FES 103 ? 1_555 S2 ? D FES . ? A FES 103 ? 1_555 102.3 ? 4 SG ? A CYS 40 ? A CYS 41 ? 1_555 FE1 ? D FES . ? A FES 103 ? 1_555 SG ? A CYS 45 ? A CYS 46 ? 1_555 104.6 ? 5 S1 ? D FES . ? A FES 103 ? 1_555 FE1 ? D FES . ? A FES 103 ? 1_555 SG ? A CYS 45 ? A CYS 46 ? 1_555 107.5 ? 6 S2 ? D FES . ? A FES 103 ? 1_555 FE1 ? D FES . ? A FES 103 ? 1_555 SG ? A CYS 45 ? A CYS 46 ? 1_555 119.8 ? 7 SG ? A CYS 48 ? A CYS 49 ? 1_555 FE2 ? D FES . ? A FES 103 ? 1_555 S1 ? D FES . ? A FES 103 ? 1_555 111.2 ? 8 SG ? A CYS 48 ? A CYS 49 ? 1_555 FE2 ? D FES . ? A FES 103 ? 1_555 S2 ? D FES . ? A FES 103 ? 1_555 111.7 ? 9 S1 ? D FES . ? A FES 103 ? 1_555 FE2 ? D FES . ? A FES 103 ? 1_555 S2 ? D FES . ? A FES 103 ? 1_555 105.7 ? 10 SG ? A CYS 48 ? A CYS 49 ? 1_555 FE2 ? D FES . ? A FES 103 ? 1_555 SG ? A CYS 78 ? A CYS 79 ? 1_555 106.3 ? 11 S1 ? D FES . ? A FES 103 ? 1_555 FE2 ? D FES . ? A FES 103 ? 1_555 SG ? A CYS 78 ? A CYS 79 ? 1_555 118.0 ? 12 S2 ? D FES . ? A FES 103 ? 1_555 FE2 ? D FES . ? A FES 103 ? 1_555 SG ? A CYS 78 ? A CYS 79 ? 1_555 103.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-09-18 2 'Structure model' 1 1 2019-12-11 3 'Structure model' 2 0 2021-08-18 4 'Structure model' 2 1 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Non-polymer description' 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' atom_site 3 3 'Structure model' atom_site_anisotrop 4 3 'Structure model' chem_comp 5 3 'Structure model' database_2 6 3 'Structure model' entity 7 3 'Structure model' pdbx_entity_nonpoly 8 3 'Structure model' pdbx_nonpoly_scheme 9 3 'Structure model' struct_site 10 3 'Structure model' struct_site_gen 11 4 'Structure model' chem_comp_atom 12 4 'Structure model' chem_comp_bond 13 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_ISSN' 2 2 'Structure model' '_citation.journal_volume' 3 2 'Structure model' '_citation.page_first' 4 2 'Structure model' '_citation.page_last' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 3 'Structure model' '_atom_site.B_iso_or_equiv' 9 3 'Structure model' '_atom_site.Cartn_x' 10 3 'Structure model' '_atom_site.Cartn_y' 11 3 'Structure model' '_atom_site.Cartn_z' 12 3 'Structure model' '_atom_site.auth_comp_id' 13 3 'Structure model' '_atom_site.label_comp_id' 14 3 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 3 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 3 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 3 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 3 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 3 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 21 3 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 22 3 'Structure model' '_chem_comp.formula' 23 3 'Structure model' '_chem_comp.formula_weight' 24 3 'Structure model' '_chem_comp.id' 25 3 'Structure model' '_database_2.pdbx_DOI' 26 3 'Structure model' '_database_2.pdbx_database_accession' 27 3 'Structure model' '_entity.formula_weight' 28 3 'Structure model' '_pdbx_entity_nonpoly.comp_id' 29 3 'Structure model' '_pdbx_nonpoly_scheme.mon_id' 30 3 'Structure model' '_pdbx_nonpoly_scheme.pdb_mon_id' 31 3 'Structure model' '_struct_site.details' 32 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 3 'Structure model' '_struct_site_gen.auth_comp_id' 34 3 'Structure model' '_struct_site_gen.label_comp_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -15.9120 _pdbx_refine_tls.origin_y -0.1129 _pdbx_refine_tls.origin_z 1.8159 _pdbx_refine_tls.T[1][1] 0.0158 _pdbx_refine_tls.T[2][2] 0.0035 _pdbx_refine_tls.T[3][3] 0.0461 _pdbx_refine_tls.T[1][2] 0.0030 _pdbx_refine_tls.T[1][3] -0.0033 _pdbx_refine_tls.T[2][3] -0.0038 _pdbx_refine_tls.L[1][1] 0.4441 _pdbx_refine_tls.L[2][2] 0.2530 _pdbx_refine_tls.L[3][3] 0.6061 _pdbx_refine_tls.L[1][2] 0.1969 _pdbx_refine_tls.L[1][3] -0.2533 _pdbx_refine_tls.L[2][3] 0.1243 _pdbx_refine_tls.S[1][1] -0.0200 _pdbx_refine_tls.S[2][2] -0.0105 _pdbx_refine_tls.S[3][3] 0.0305 _pdbx_refine_tls.S[1][2] 0.0055 _pdbx_refine_tls.S[1][3] 0.0293 _pdbx_refine_tls.S[2][3] -0.0047 _pdbx_refine_tls.S[2][1] 0.0063 _pdbx_refine_tls.S[3][1] 0.0366 _pdbx_refine_tls.S[3][2] -0.0306 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 98 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 1 ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 2 ? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 3 ? phasing ? ? 'Alexei Vaguine' alexei@ysbl.york.ac.uk ? ? ? ? Fortran_77 http://www.ccp4.ac.uk/dist/html/molrep.html ? MOLREP ? ? program . 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 40 ? ? -139.87 -71.47 2 1 SER A 40 ? ? -138.48 -74.11 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BEN C1 C Y N 74 BEN C2 C Y N 75 BEN C3 C Y N 76 BEN C4 C Y N 77 BEN C5 C Y N 78 BEN C6 C Y N 79 BEN C C N N 80 BEN N1 N N N 81 BEN N2 N N N 82 BEN H2 H N N 83 BEN H3 H N N 84 BEN H4 H N N 85 BEN H5 H N N 86 BEN H6 H N N 87 BEN HN1 H N N 88 BEN HN21 H N N 89 BEN HN22 H N N 90 CYS N N N N 91 CYS CA C N R 92 CYS C C N N 93 CYS O O N N 94 CYS CB C N N 95 CYS SG S N N 96 CYS OXT O N N 97 CYS H H N N 98 CYS H2 H N N 99 CYS HA H N N 100 CYS HB2 H N N 101 CYS HB3 H N N 102 CYS HG H N N 103 CYS HXT H N N 104 FES FE1 FE N N 105 FES FE2 FE N N 106 FES S1 S N N 107 FES S2 S N N 108 GLN N N N N 109 GLN CA C N S 110 GLN C C N N 111 GLN O O N N 112 GLN CB C N N 113 GLN CG C N N 114 GLN CD C N N 115 GLN OE1 O N N 116 GLN NE2 N N N 117 GLN OXT O N N 118 GLN H H N N 119 GLN H2 H N N 120 GLN HA H N N 121 GLN HB2 H N N 122 GLN HB3 H N N 123 GLN HG2 H N N 124 GLN HG3 H N N 125 GLN HE21 H N N 126 GLN HE22 H N N 127 GLN HXT H N N 128 GLU N N N N 129 GLU CA C N S 130 GLU C C N N 131 GLU O O N N 132 GLU CB C N N 133 GLU CG C N N 134 GLU CD C N N 135 GLU OE1 O N N 136 GLU OE2 O N N 137 GLU OXT O N N 138 GLU H H N N 139 GLU H2 H N N 140 GLU HA H N N 141 GLU HB2 H N N 142 GLU HB3 H N N 143 GLU HG2 H N N 144 GLU HG3 H N N 145 GLU HE2 H N N 146 GLU HXT H N N 147 GLY N N N N 148 GLY CA C N N 149 GLY C C N N 150 GLY O O N N 151 GLY OXT O N N 152 GLY H H N N 153 GLY H2 H N N 154 GLY HA2 H N N 155 GLY HA3 H N N 156 GLY HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 PHE N N N N 230 PHE CA C N S 231 PHE C C N N 232 PHE O O N N 233 PHE CB C N N 234 PHE CG C Y N 235 PHE CD1 C Y N 236 PHE CD2 C Y N 237 PHE CE1 C Y N 238 PHE CE2 C Y N 239 PHE CZ C Y N 240 PHE OXT O N N 241 PHE H H N N 242 PHE H2 H N N 243 PHE HA H N N 244 PHE HB2 H N N 245 PHE HB3 H N N 246 PHE HD1 H N N 247 PHE HD2 H N N 248 PHE HE1 H N N 249 PHE HE2 H N N 250 PHE HZ H N N 251 PHE HXT H N N 252 PRO N N N N 253 PRO CA C N S 254 PRO C C N N 255 PRO O O N N 256 PRO CB C N N 257 PRO CG C N N 258 PRO CD C N N 259 PRO OXT O N N 260 PRO H H N N 261 PRO HA H N N 262 PRO HB2 H N N 263 PRO HB3 H N N 264 PRO HG2 H N N 265 PRO HG3 H N N 266 PRO HD2 H N N 267 PRO HD3 H N N 268 PRO HXT H N N 269 SER N N N N 270 SER CA C N S 271 SER C C N N 272 SER O O N N 273 SER CB C N N 274 SER OG O N N 275 SER OXT O N N 276 SER H H N N 277 SER H2 H N N 278 SER HA H N N 279 SER HB2 H N N 280 SER HB3 H N N 281 SER HG H N N 282 SER HXT H N N 283 SO4 S S N N 284 SO4 O1 O N N 285 SO4 O2 O N N 286 SO4 O3 O N N 287 SO4 O4 O N N 288 THR N N N N 289 THR CA C N S 290 THR C C N N 291 THR O O N N 292 THR CB C N R 293 THR OG1 O N N 294 THR CG2 C N N 295 THR OXT O N N 296 THR H H N N 297 THR H2 H N N 298 THR HA H N N 299 THR HB H N N 300 THR HG1 H N N 301 THR HG21 H N N 302 THR HG22 H N N 303 THR HG23 H N N 304 THR HXT H N N 305 TYR N N N N 306 TYR CA C N S 307 TYR C C N N 308 TYR O O N N 309 TYR CB C N N 310 TYR CG C Y N 311 TYR CD1 C Y N 312 TYR CD2 C Y N 313 TYR CE1 C Y N 314 TYR CE2 C Y N 315 TYR CZ C Y N 316 TYR OH O N N 317 TYR OXT O N N 318 TYR H H N N 319 TYR H2 H N N 320 TYR HA H N N 321 TYR HB2 H N N 322 TYR HB3 H N N 323 TYR HD1 H N N 324 TYR HD2 H N N 325 TYR HE1 H N N 326 TYR HE2 H N N 327 TYR HH H N N 328 TYR HXT H N N 329 VAL N N N N 330 VAL CA C N S 331 VAL C C N N 332 VAL O O N N 333 VAL CB C N N 334 VAL CG1 C N N 335 VAL CG2 C N N 336 VAL OXT O N N 337 VAL H H N N 338 VAL H2 H N N 339 VAL HA H N N 340 VAL HB H N N 341 VAL HG11 H N N 342 VAL HG12 H N N 343 VAL HG13 H N N 344 VAL HG21 H N N 345 VAL HG22 H N N 346 VAL HG23 H N N 347 VAL HXT H N N 348 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BEN C1 C2 doub Y N 70 BEN C1 C6 sing Y N 71 BEN C1 C sing N N 72 BEN C2 C3 sing Y N 73 BEN C2 H2 sing N N 74 BEN C3 C4 doub Y N 75 BEN C3 H3 sing N N 76 BEN C4 C5 sing Y N 77 BEN C4 H4 sing N N 78 BEN C5 C6 doub Y N 79 BEN C5 H5 sing N N 80 BEN C6 H6 sing N N 81 BEN C N1 doub N E 82 BEN C N2 sing N N 83 BEN N1 HN1 sing N N 84 BEN N2 HN21 sing N N 85 BEN N2 HN22 sing N N 86 CYS N CA sing N N 87 CYS N H sing N N 88 CYS N H2 sing N N 89 CYS CA C sing N N 90 CYS CA CB sing N N 91 CYS CA HA sing N N 92 CYS C O doub N N 93 CYS C OXT sing N N 94 CYS CB SG sing N N 95 CYS CB HB2 sing N N 96 CYS CB HB3 sing N N 97 CYS SG HG sing N N 98 CYS OXT HXT sing N N 99 FES FE1 S1 sing N N 100 FES FE1 S2 sing N N 101 FES FE2 S1 sing N N 102 FES FE2 S2 sing N N 103 GLN N CA sing N N 104 GLN N H sing N N 105 GLN N H2 sing N N 106 GLN CA C sing N N 107 GLN CA CB sing N N 108 GLN CA HA sing N N 109 GLN C O doub N N 110 GLN C OXT sing N N 111 GLN CB CG sing N N 112 GLN CB HB2 sing N N 113 GLN CB HB3 sing N N 114 GLN CG CD sing N N 115 GLN CG HG2 sing N N 116 GLN CG HG3 sing N N 117 GLN CD OE1 doub N N 118 GLN CD NE2 sing N N 119 GLN NE2 HE21 sing N N 120 GLN NE2 HE22 sing N N 121 GLN OXT HXT sing N N 122 GLU N CA sing N N 123 GLU N H sing N N 124 GLU N H2 sing N N 125 GLU CA C sing N N 126 GLU CA CB sing N N 127 GLU CA HA sing N N 128 GLU C O doub N N 129 GLU C OXT sing N N 130 GLU CB CG sing N N 131 GLU CB HB2 sing N N 132 GLU CB HB3 sing N N 133 GLU CG CD sing N N 134 GLU CG HG2 sing N N 135 GLU CG HG3 sing N N 136 GLU CD OE1 doub N N 137 GLU CD OE2 sing N N 138 GLU OE2 HE2 sing N N 139 GLU OXT HXT sing N N 140 GLY N CA sing N N 141 GLY N H sing N N 142 GLY N H2 sing N N 143 GLY CA C sing N N 144 GLY CA HA2 sing N N 145 GLY CA HA3 sing N N 146 GLY C O doub N N 147 GLY C OXT sing N N 148 GLY OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 PHE N CA sing N N 218 PHE N H sing N N 219 PHE N H2 sing N N 220 PHE CA C sing N N 221 PHE CA CB sing N N 222 PHE CA HA sing N N 223 PHE C O doub N N 224 PHE C OXT sing N N 225 PHE CB CG sing N N 226 PHE CB HB2 sing N N 227 PHE CB HB3 sing N N 228 PHE CG CD1 doub Y N 229 PHE CG CD2 sing Y N 230 PHE CD1 CE1 sing Y N 231 PHE CD1 HD1 sing N N 232 PHE CD2 CE2 doub Y N 233 PHE CD2 HD2 sing N N 234 PHE CE1 CZ doub Y N 235 PHE CE1 HE1 sing N N 236 PHE CE2 CZ sing Y N 237 PHE CE2 HE2 sing N N 238 PHE CZ HZ sing N N 239 PHE OXT HXT sing N N 240 PRO N CA sing N N 241 PRO N CD sing N N 242 PRO N H sing N N 243 PRO CA C sing N N 244 PRO CA CB sing N N 245 PRO CA HA sing N N 246 PRO C O doub N N 247 PRO C OXT sing N N 248 PRO CB CG sing N N 249 PRO CB HB2 sing N N 250 PRO CB HB3 sing N N 251 PRO CG CD sing N N 252 PRO CG HG2 sing N N 253 PRO CG HG3 sing N N 254 PRO CD HD2 sing N N 255 PRO CD HD3 sing N N 256 PRO OXT HXT sing N N 257 SER N CA sing N N 258 SER N H sing N N 259 SER N H2 sing N N 260 SER CA C sing N N 261 SER CA CB sing N N 262 SER CA HA sing N N 263 SER C O doub N N 264 SER C OXT sing N N 265 SER CB OG sing N N 266 SER CB HB2 sing N N 267 SER CB HB3 sing N N 268 SER OG HG sing N N 269 SER OXT HXT sing N N 270 SO4 S O1 doub N N 271 SO4 S O2 doub N N 272 SO4 S O3 sing N N 273 SO4 S O4 sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TYR N CA sing N N 291 TYR N H sing N N 292 TYR N H2 sing N N 293 TYR CA C sing N N 294 TYR CA CB sing N N 295 TYR CA HA sing N N 296 TYR C O doub N N 297 TYR C OXT sing N N 298 TYR CB CG sing N N 299 TYR CB HB2 sing N N 300 TYR CB HB3 sing N N 301 TYR CG CD1 doub Y N 302 TYR CG CD2 sing Y N 303 TYR CD1 CE1 sing Y N 304 TYR CD1 HD1 sing N N 305 TYR CD2 CE2 doub Y N 306 TYR CD2 HD2 sing N N 307 TYR CE1 CZ doub Y N 308 TYR CE1 HE1 sing N N 309 TYR CE2 CZ sing Y N 310 TYR CE2 HE2 sing N N 311 TYR CZ OH sing N N 312 TYR OH HH sing N N 313 TYR OXT HXT sing N N 314 VAL N CA sing N N 315 VAL N H sing N N 316 VAL N H2 sing N N 317 VAL CA C sing N N 318 VAL CA CB sing N N 319 VAL CA HA sing N N 320 VAL C O doub N N 321 VAL C OXT sing N N 322 VAL CB CG1 sing N N 323 VAL CB CG2 sing N N 324 VAL CB HB sing N N 325 VAL CG1 HG11 sing N N 326 VAL CG1 HG12 sing N N 327 VAL CG1 HG13 sing N N 328 VAL CG2 HG21 sing N N 329 VAL CG2 HG22 sing N N 330 VAL CG2 HG23 sing N N 331 VAL OXT HXT sing N N 332 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 BENZAMIDINE BEN 3 'FE2/S2 (INORGANIC) CLUSTER' FES 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5AUI _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? #