HEADER CARBOHYDRATE 25-MAR-19 6JOY TITLE THE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF BRANCHING ENZYME FROM TITLE 2 RHODOTHERMUS OBAMENSIS STB05 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1,4-ALPHA-GLUCAN BRANCHING ENZYME GLGB; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-ALPHA-D-GLUCAN:1,4-ALPHA-D-GLUCAN 6-GLUCOSYL- COMPND 5 TRANSFERASE,ALPHA-(1->4)-GLUCAN BRANCHING ENZYME,GLYCOGEN BRANCHING COMPND 6 ENZYME,BE; COMPND 7 EC: 2.4.1.18; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOTHERMUS MARINUS; SOURCE 3 ORGANISM_COMMON: RHODOTHERMUS OBAMENSIS; SOURCE 4 ORGANISM_TAXID: 29549; SOURCE 5 GENE: GLGB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BRANCHING ENZYME, CARBOHYDRATE EXPDTA X-RAY DIFFRACTION AUTHOR Z.F.LI,X.F.BAN,H.M.JIANG,Z.WANG,T.C.JIN,C.M.LI,Z.B.GU REVDAT 3 27-MAR-24 6JOY 1 JRNL REMARK REVDAT 2 17-MAR-21 6JOY 1 JRNL REVDAT 1 04-MAR-20 6JOY 0 JRNL AUTH H.JIANG,X.XIE,X.BAN,Z.GU,L.CHENG,Y.HONG,C.LI,Z.LI JRNL TITL FLEXIBLE LOOP IN CARBOHYDRATE-BINDING MODULE 48 JRNL TITL 2 ALLOSTERICALLY MODULATES SUBSTRATE BINDING OF THE JRNL TITL 3 1,4-ALPHA-GLUCAN BRANCHING ENZYME. JRNL REF J.AGRIC.FOOD CHEM. V. 69 5755 2021 JRNL REFN ESSN 1520-5118 JRNL PMID 33988022 JRNL DOI 10.1021/ACS.JAFC.1C00293 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Z.WANG,C.XIN,C.LI,Z.GU,L.CHENG,Y.HONG,X.BAN,Z.LI REMARK 1 TITL EXPRESSION AND CHARACTERIZATION OF AN EXTREMELY THERMOPHILIC REMARK 1 TITL 2 1,4-ALPHA-GLUCAN BRANCHING ENZYME FROM RHODOTHERMUS REMARK 1 TITL 3 OBAMENSIS STB05. REMARK 1 REF PROTEIN EXPR.PURIF. V. 164 05478 2019 REMARK 1 REFN ESSN 1096-0279 REMARK 1 PMID 31421223 REMARK 1 DOI 10.1016/J.PEP.2019.105478 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 63390 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3205 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.4204 - 6.7813 0.89 2640 140 0.2417 0.2544 REMARK 3 2 6.7813 - 5.3913 0.96 2669 141 0.2578 0.3015 REMARK 3 3 5.3913 - 4.7124 0.97 2681 155 0.2205 0.2452 REMARK 3 4 4.7124 - 4.2827 0.98 2715 130 0.2139 0.2195 REMARK 3 5 4.2827 - 3.9764 0.99 2702 132 0.2248 0.2653 REMARK 3 6 3.9764 - 3.7423 0.99 2710 127 0.2328 0.2918 REMARK 3 7 3.7423 - 3.5552 0.99 2698 119 0.2365 0.2488 REMARK 3 8 3.5552 - 3.4006 0.99 2685 146 0.2482 0.2455 REMARK 3 9 3.4006 - 3.2699 1.00 2700 141 0.2563 0.2907 REMARK 3 10 3.2699 - 3.1571 1.00 2650 154 0.2547 0.2913 REMARK 3 11 3.1571 - 3.0585 1.00 2686 145 0.2683 0.3283 REMARK 3 12 3.0585 - 2.9711 1.00 2661 164 0.2701 0.3494 REMARK 3 13 2.9711 - 2.8930 1.00 2686 144 0.2685 0.2925 REMARK 3 14 2.8930 - 2.8224 1.00 2692 123 0.2624 0.3064 REMARK 3 15 2.8224 - 2.7583 1.00 2668 134 0.2550 0.3156 REMARK 3 16 2.7583 - 2.6997 1.00 2642 154 0.2617 0.3239 REMARK 3 17 2.6997 - 2.6457 1.00 2642 155 0.2666 0.2972 REMARK 3 18 2.6457 - 2.5958 1.00 2665 157 0.2762 0.2800 REMARK 3 19 2.5958 - 2.5494 0.99 2649 132 0.2779 0.3183 REMARK 3 20 2.5494 - 2.5062 0.97 2566 146 0.2974 0.3473 REMARK 3 21 2.5062 - 2.4658 0.95 2505 131 0.3188 0.3336 REMARK 3 22 2.4658 - 2.4279 0.85 2274 125 0.3507 0.3532 REMARK 3 23 2.4279 - 2.3922 0.75 1999 110 0.3624 0.3692 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5336 REMARK 3 ANGLE : 1.114 7280 REMARK 3 CHIRALITY : 0.060 698 REMARK 3 PLANARITY : 0.007 945 REMARK 3 DIHEDRAL : 4.268 3003 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JOY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-APR-19. REMARK 100 THE DEPOSITION ID IS D_1300011485. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978910 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63390 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 31.418 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 2.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 10.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, HEPES, AMMONIA SULFATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 102.69350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 62.83550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 62.83550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 154.04025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 62.83550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 62.83550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.34675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 62.83550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.83550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 154.04025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 62.83550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.83550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 51.34675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 102.69350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 178 CG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 273 O HOH A 701 1.89 REMARK 500 O ARG A 134 N GLY A 136 1.95 REMARK 500 O ALA A 540 N ARG A 542 2.05 REMARK 500 O PRO A 159 N GLU A 161 2.11 REMARK 500 NE ARG A 134 O HOH A 702 2.12 REMARK 500 OD1 ASP A 53 O HOH A 703 2.13 REMARK 500 O HOH A 701 O HOH A 826 2.13 REMARK 500 NH2 ARG A 542 O HOH A 704 2.13 REMARK 500 O GLU A 104 OG1 THR A 107 2.15 REMARK 500 NZ LYS A 83 O HOH A 705 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 781 O HOH A 850 3444 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 534 CB CYS A 534 SG -0.110 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -160.70 -117.68 REMARK 500 ALA A 39 64.37 -162.32 REMARK 500 ASP A 53 58.05 -101.71 REMARK 500 PRO A 56 -5.80 -58.99 REMARK 500 SER A 109 -28.01 155.51 REMARK 500 GLU A 112 31.61 135.78 REMARK 500 LEU A 114 107.32 -166.57 REMARK 500 ARG A 134 12.71 -57.08 REMARK 500 LYS A 135 66.18 -45.44 REMARK 500 PRO A 137 -131.92 -80.06 REMARK 500 ALA A 138 82.40 -61.01 REMARK 500 ARG A 158 -160.53 50.16 REMARK 500 PRO A 159 -148.73 -61.48 REMARK 500 GLN A 201 -70.57 -85.42 REMARK 500 VAL A 202 110.52 88.17 REMARK 500 THR A 209 -162.46 122.13 REMARK 500 PHE A 210 12.73 -142.91 REMARK 500 HIS A 240 155.52 179.05 REMARK 500 PHE A 250 -101.80 64.16 REMARK 500 PHE A 251 -54.58 105.68 REMARK 500 LEU A 256 -72.09 -97.28 REMARK 500 TYR A 266 -136.01 61.37 REMARK 500 HIS A 267 132.08 69.56 REMARK 500 PRO A 268 95.59 -47.10 REMARK 500 ASP A 269 84.91 -63.49 REMARK 500 THR A 272 -150.17 72.48 REMARK 500 TYR A 273 -66.14 75.92 REMARK 500 TYR A 315 -59.07 62.66 REMARK 500 GLU A 319 -70.27 -137.54 REMARK 500 TRP A 320 -82.01 -78.08 REMARK 500 THR A 321 157.55 150.85 REMARK 500 PRO A 322 -97.36 -95.12 REMARK 500 ASN A 323 -116.55 62.96 REMARK 500 ILE A 324 49.98 -155.02 REMARK 500 GLU A 350 19.14 57.80 REMARK 500 HIS A 428 -133.60 60.52 REMARK 500 SER A 432 172.27 -59.74 REMARK 500 GLU A 475 150.87 -43.41 REMARK 500 ASP A 524 130.67 -171.37 REMARK 500 ASP A 527 66.73 -69.30 REMARK 500 ASN A 539 -141.88 -137.66 REMARK 500 PRO A 594 31.84 -77.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 51 ASN A 52 143.44 REMARK 500 SER A 109 PRO A 110 148.81 REMARK 500 GLY A 136 PRO A 137 -135.78 REMARK 500 PRO A 137 ALA A 138 127.15 REMARK 500 ARG A 317 LYS A 318 -149.20 REMARK 500 GLU A 350 ALA A 351 143.91 REMARK 500 REMARK 500 REMARK: NULL DBREF 6JOY A 1 621 UNP Q93HU3 GLGB_RHOMR 1 621 SEQRES 1 A 621 MET SER TRP LEU THR GLU GLU ASP ILE ARG ARG TRP GLU SEQRES 2 A 621 SER GLY THR PHE TYR ASP SER TYR ARG LYS LEU GLY ALA SEQRES 3 A 621 HIS PRO ASP ASP GLU GLY THR TRP PHE CYS VAL TRP ALA SEQRES 4 A 621 PRO HIS ALA ASP GLY VAL SER VAL LEU GLY ALA PHE ASN SEQRES 5 A 621 ASP TRP ASN PRO GLU ALA ASN PRO LEU GLU ARG TYR GLY SEQRES 6 A 621 GLY GLY LEU TRP ALA GLY TYR VAL PRO GLY ALA ARG PRO SEQRES 7 A 621 GLY HIS THR TYR LYS TYR ARG ILE ARG HIS GLY PHE TYR SEQRES 8 A 621 GLN ALA ASP LYS THR ASP PRO TYR ALA PHE ALA MET GLU SEQRES 9 A 621 PRO PRO THR GLY SER PRO ILE GLU GLY LEU ALA SER ILE SEQRES 10 A 621 ILE THR ARG LEU ASP TYR THR TRP HIS ASP ASP GLU TRP SEQRES 11 A 621 MET ARG ARG ARG LYS GLY PRO ALA SER LEU TYR GLU PRO SEQRES 12 A 621 VAL SER ILE TYR GLU VAL HIS LEU GLY SER TRP ARG HIS SEQRES 13 A 621 LYS ARG PRO GLY GLU SER PHE SER TYR ARG GLU ILE ALA SEQRES 14 A 621 GLU PRO LEU ALA ASP TYR VAL GLN GLU MET GLY PHE THR SEQRES 15 A 621 HIS VAL GLU LEU LEU PRO VAL MET GLU HIS PRO TYR TYR SEQRES 16 A 621 GLY SER TRP GLY TYR GLN VAL VAL GLY TYR TYR ALA PRO SEQRES 17 A 621 THR PHE ARG TYR GLY SER PRO GLN ASP LEU MET TYR LEU SEQRES 18 A 621 ILE ASP TYR LEU HIS GLN ARG GLY ILE GLY VAL ILE LEU SEQRES 19 A 621 ASP TRP VAL PRO SER HIS PHE ALA ALA ASP PRO GLN GLY SEQRES 20 A 621 LEU VAL PHE PHE ASP GLY THR THR LEU PHE GLU TYR ASP SEQRES 21 A 621 ASP PRO LYS MET ARG TYR HIS PRO ASP TRP GLY THR TYR SEQRES 22 A 621 VAL PHE ASP TYR ASN LYS PRO GLY VAL ARG ASN PHE LEU SEQRES 23 A 621 ILE SER ASN ALA LEU PHE TRP LEU GLU LYS TYR HIS VAL SEQRES 24 A 621 ASP GLY LEU ARG VAL ASP ALA VAL ALA SER MET LEU TYR SEQRES 25 A 621 ARG ASP TYR SER ARG LYS GLU TRP THR PRO ASN ILE PHE SEQRES 26 A 621 GLY GLY ARG GLU ASN LEU GLU ALA ILE ASP PHE ILE LYS SEQRES 27 A 621 LYS PHE ASN GLU THR VAL TYR LEU HIS PHE PRO GLU ALA SEQRES 28 A 621 MET THR ILE ALA GLU GLU SER THR ALA TRP PRO GLY VAL SEQRES 29 A 621 SER ALA PRO THR TYR ASN ASN GLY LEU GLY PHE LEU TYR SEQRES 30 A 621 LYS TRP ASN MET GLY TRP MET HIS ASP THR LEU ASP TYR SEQRES 31 A 621 ILE GLN ARG ASP PRO ILE TYR ARG LYS TYR HIS HIS ASP SEQRES 32 A 621 GLU LEU THR PHE SER LEU TRP TYR ALA PHE SER GLU HIS SEQRES 33 A 621 TYR VAL LEU PRO LEU SER HIS ASP GLU VAL VAL HIS GLY SEQRES 34 A 621 LYS GLY SER LEU TRP GLY LYS MET PRO GLY ASP ASP TRP SEQRES 35 A 621 GLN LYS ALA ALA ASN LEU ARG LEU LEU PHE GLY HIS MET SEQRES 36 A 621 TRP GLY HIS PRO GLY LYS LYS LEU LEU PHE MET GLY GLY SEQRES 37 A 621 GLU PHE GLY GLN HIS HIS GLU TRP ASN HIS ASP THR GLN SEQRES 38 A 621 LEU GLU TRP HIS LEU LEU ASP GLN PRO TYR HIS ARG GLY SEQRES 39 A 621 ILE GLN LEU TRP VAL CYS ASP LEU ASN HIS LEU TYR ARG SEQRES 40 A 621 THR ASN PRO ALA LEU TRP HIS ASP GLY PRO GLU GLY PHE SEQRES 41 A 621 GLU TRP ILE ASP PHE SER ASP ARG ASP GLN SER VAL ILE SEQRES 42 A 621 CYS TYR LEU ARG LYS ASN ALA GLY ARG MET LEU LEU PHE SEQRES 43 A 621 VAL LEU ASN PHE THR PRO VAL PRO ARG GLU HIS TYR ARG SEQRES 44 A 621 VAL GLY VAL PRO ILE GLY GLY PRO TRP HIS GLU VAL LEU SEQRES 45 A 621 ASN SER ASP ALA VAL ALA TYR GLY GLY SER GLY MET GLY SEQRES 46 A 621 ASN PHE GLY ARG VAL GLU ALA VAL PRO GLU SER TRP HIS SEQRES 47 A 621 GLY ARG PRO PHE HIS LEU GLU LEU THR LEU PRO PRO LEU SEQRES 48 A 621 ALA ALA LEU ILE LEU GLU PRO GLU HIS GLY FORMUL 2 HOH *156(H2 O) HELIX 1 AA1 THR A 5 SER A 14 1 10 HELIX 2 AA2 ASP A 19 LYS A 23 5 5 HELIX 3 AA3 ASP A 127 ARG A 134 1 8 HELIX 4 AA4 ALA A 138 GLU A 142 5 5 HELIX 5 AA5 HIS A 150 TRP A 154 5 5 HELIX 6 AA6 SER A 164 GLY A 180 1 17 HELIX 7 AA7 TYR A 194 TRP A 198 5 5 HELIX 8 AA8 SER A 214 ARG A 228 1 15 HELIX 9 AA9 LYS A 279 TYR A 297 1 19 HELIX 10 AB1 ALA A 306 TYR A 312 1 7 HELIX 11 AB2 ASN A 330 PHE A 348 1 19 HELIX 12 AB3 PRO A 367 ASN A 371 5 5 HELIX 13 AB4 ASN A 380 ARG A 393 1 14 HELIX 14 AB5 ASP A 394 TYR A 400 5 7 HELIX 15 AB6 HIS A 401 PHE A 407 1 7 HELIX 16 AB7 PHE A 407 ALA A 412 1 6 HELIX 17 AB8 SER A 422 VAL A 427 5 6 HELIX 18 AB9 SER A 432 MET A 437 1 6 HELIX 19 AC1 ASP A 440 HIS A 458 1 19 HELIX 20 AC2 GLY A 467 GLY A 471 5 5 HELIX 21 AC3 GLU A 483 ASP A 488 5 6 HELIX 22 AC4 GLN A 489 ASN A 509 1 21 HELIX 23 AC5 PRO A 510 TRP A 513 5 4 HELIX 24 AC6 GLY A 516 GLU A 518 5 3 HELIX 25 AC7 ALA A 576 GLY A 580 5 5 SHEET 1 AA1 7 GLY A 25 PRO A 28 0 SHEET 2 AA1 7 GLY A 32 TRP A 38 -1 O TRP A 34 N HIS A 27 SHEET 3 AA1 7 LEU A 68 PRO A 74 -1 O TRP A 69 N VAL A 37 SHEET 4 AA1 7 PRO A 60 ARG A 63 -1 N GLU A 62 O ALA A 70 SHEET 5 AA1 7 GLY A 44 GLY A 49 -1 N VAL A 45 O LEU A 61 SHEET 6 AA1 7 THR A 81 HIS A 88 -1 O LYS A 83 N LEU A 48 SHEET 7 AA1 7 TYR A 91 LYS A 95 -1 O ALA A 93 N ILE A 86 SHEET 1 AA2 8 GLY A 25 PRO A 28 0 SHEET 2 AA2 8 GLY A 32 TRP A 38 -1 O TRP A 34 N HIS A 27 SHEET 3 AA2 8 LEU A 68 PRO A 74 -1 O TRP A 69 N VAL A 37 SHEET 4 AA2 8 PRO A 60 ARG A 63 -1 N GLU A 62 O ALA A 70 SHEET 5 AA2 8 GLY A 44 GLY A 49 -1 N VAL A 45 O LEU A 61 SHEET 6 AA2 8 THR A 81 HIS A 88 -1 O LYS A 83 N LEU A 48 SHEET 7 AA2 8 LEU A 114 ILE A 117 -1 O SER A 116 N TYR A 82 SHEET 8 AA2 8 MET A 103 THR A 107 -1 N GLU A 104 O ALA A 115 SHEET 1 AA3 9 SER A 145 VAL A 149 0 SHEET 2 AA3 9 HIS A 183 LEU A 186 1 O GLU A 185 N VAL A 149 SHEET 3 AA3 9 GLY A 231 TRP A 236 1 O ILE A 233 N LEU A 186 SHEET 4 AA3 9 GLY A 301 VAL A 304 1 O ARG A 303 N TRP A 236 SHEET 5 AA3 9 MET A 352 ALA A 355 1 O ILE A 354 N VAL A 304 SHEET 6 AA3 9 TYR A 377 TRP A 379 1 O TRP A 379 N ALA A 355 SHEET 7 AA3 9 TYR A 417 LEU A 421 1 O VAL A 418 N LYS A 378 SHEET 8 AA3 9 LYS A 461 PHE A 465 1 O LYS A 461 N LEU A 419 SHEET 9 AA3 9 SER A 145 VAL A 149 1 N ILE A 146 O LYS A 462 SHEET 1 AA4 6 PHE A 520 ASP A 524 0 SHEET 2 AA4 6 VAL A 532 LYS A 538 -1 O LEU A 536 N GLU A 521 SHEET 3 AA4 6 MET A 543 ASN A 549 -1 O PHE A 546 N TYR A 535 SHEET 4 AA4 6 ALA A 613 PRO A 618 -1 O LEU A 616 N LEU A 545 SHEET 5 AA4 6 PRO A 567 ASN A 573 -1 N VAL A 571 O ILE A 615 SHEET 6 AA4 6 VAL A 590 GLU A 591 -1 O VAL A 590 N TRP A 568 SHEET 1 AA5 2 ARG A 555 VAL A 562 0 SHEET 2 AA5 2 PHE A 602 LEU A 608 -1 O LEU A 608 N ARG A 555 CRYST1 125.671 125.671 205.387 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007957 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004869 0.00000