HEADER HEME-BINDING PROTEIN 08-APR-19 6JSC TITLE CRYSTAL STRUCTURE OF THE H434A VARIANT OF THE C-TERMINAL DOMAIN OF TITLE 2 HTAA FROM CORYNEBACTERIUM GLUTAMICUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL MEMBRANE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM (STRAIN ATCC 13032 / SOURCE 3 DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025); SOURCE 4 ORGANISM_TAXID: 196627; SOURCE 5 STRAIN: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025; SOURCE 6 GENE: CGL0388; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS HEME, HEME TRANSPORT, HEME-BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.MURAKI,S.AONO REVDAT 3 22-NOV-23 6JSC 1 LINK REVDAT 2 27-NOV-19 6JSC 1 JRNL REVDAT 1 20-NOV-19 6JSC 0 JRNL AUTH N.MURAKI,C.KITATSUJI,Y.OKAMOTO,T.UCHIDA,K.ISHIMORI,S.AONO JRNL TITL STRUCTURAL BASIS FOR THE HEME TRANSFER REACTION IN HEME JRNL TITL 2 UPTAKE MACHINERY FROM CORYNEBACTERIA. JRNL REF CHEM.COMMUN.(CAMB.) V. 55 13864 2019 JRNL REFN ESSN 1364-548X JRNL PMID 31670736 JRNL DOI 10.1039/C9CC07369H REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 66461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3323 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.2063 - 4.0355 0.98 2883 151 0.1679 0.1927 REMARK 3 2 4.0355 - 3.2037 0.99 2757 146 0.1711 0.2133 REMARK 3 3 3.2037 - 2.7989 1.00 2718 143 0.2029 0.2158 REMARK 3 4 2.7989 - 2.5431 0.99 2708 142 0.2069 0.1954 REMARK 3 5 2.5431 - 2.3608 0.99 2696 142 0.1925 0.1835 REMARK 3 6 2.3608 - 2.2217 0.99 2670 140 0.1802 0.1859 REMARK 3 7 2.2217 - 2.1104 0.99 2670 141 0.1687 0.1918 REMARK 3 8 2.1104 - 2.0186 0.99 2638 139 0.1644 0.2098 REMARK 3 9 2.0186 - 1.9409 0.99 2609 137 0.1708 0.2020 REMARK 3 10 1.9409 - 1.8739 0.99 2633 139 0.1760 0.1897 REMARK 3 11 1.8739 - 1.8153 0.99 2650 139 0.1777 0.2176 REMARK 3 12 1.8153 - 1.7634 0.98 2606 137 0.1743 0.1913 REMARK 3 13 1.7634 - 1.7170 0.98 2602 137 0.1626 0.1859 REMARK 3 14 1.7170 - 1.6751 0.98 2633 139 0.1677 0.1740 REMARK 3 15 1.6751 - 1.6370 0.98 2576 135 0.1697 0.1802 REMARK 3 16 1.6370 - 1.6022 0.98 2593 137 0.1760 0.2140 REMARK 3 17 1.6022 - 1.5701 0.98 2575 135 0.1814 0.2194 REMARK 3 18 1.5701 - 1.5405 0.97 2578 136 0.1772 0.2219 REMARK 3 19 1.5405 - 1.5130 0.97 2595 137 0.1907 0.2111 REMARK 3 20 1.5130 - 1.4873 0.97 2520 132 0.1936 0.2332 REMARK 3 21 1.4873 - 1.4634 0.97 2606 138 0.2036 0.2137 REMARK 3 22 1.4634 - 1.4408 0.97 2542 133 0.2078 0.2203 REMARK 3 23 1.4408 - 1.4196 0.97 2573 136 0.2247 0.2451 REMARK 3 24 1.4196 - 1.3997 0.96 2507 132 0.2468 0.2565 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2639 REMARK 3 ANGLE : 1.166 3638 REMARK 3 CHIRALITY : 0.090 391 REMARK 3 PLANARITY : 0.004 483 REMARK 3 DIHEDRAL : 17.208 894 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 364 THROUGH 530) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2465 -4.8528 -25.3752 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.0646 REMARK 3 T33: 0.0945 T12: -0.0004 REMARK 3 T13: 0.0000 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.9301 L22: 1.0116 REMARK 3 L33: 2.2907 L12: -0.1043 REMARK 3 L13: -0.6051 L23: 0.1771 REMARK 3 S TENSOR REMARK 3 S11: 0.0435 S12: 0.0142 S13: 0.0407 REMARK 3 S21: -0.0349 S22: 0.0066 S23: 0.0472 REMARK 3 S31: -0.1199 S32: -0.0441 S33: -0.0427 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 364 THROUGH 531) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0513 -25.4493 -25.2063 REMARK 3 T TENSOR REMARK 3 T11: 0.0802 T22: 0.0741 REMARK 3 T33: 0.1084 T12: 0.0042 REMARK 3 T13: -0.0060 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.9055 L22: 0.9211 REMARK 3 L33: 1.9356 L12: -0.3290 REMARK 3 L13: -0.1124 L23: 0.0892 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: -0.0217 S13: -0.0977 REMARK 3 S21: 0.0085 S22: 0.0335 S23: 0.0030 REMARK 3 S31: 0.2627 S32: 0.0253 S33: -0.0250 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JSC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-APR-19. REMARK 100 THE DEPOSITION ID IS D_1300011643. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.900 REMARK 200 MONOCHROMATOR : SI (111) DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66461 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 36.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.06650 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.62400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6JSA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.5 M HCOONA, HEPES PH7.0, 7% SUCROSE, REMARK 280 PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.52000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.72000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.57500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 99.72000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.52000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 21.57500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 363 REMARK 465 GLU A 531 REMARK 465 HIS A 532 REMARK 465 HIS A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 MET B 363 REMARK 465 HIS B 532 REMARK 465 HIS B 533 REMARK 465 HIS B 534 REMARK 465 HIS B 535 REMARK 465 HIS B 536 REMARK 465 HIS B 537 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 502 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 376 -77.36 68.42 REMARK 500 VAL B 376 -78.29 69.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 383 OH REMARK 620 2 HEM A 201 NA 99.8 REMARK 620 3 HEM A 201 NB 103.2 86.6 REMARK 620 4 HEM A 201 NC 105.2 155.0 88.2 REMARK 620 5 HEM A 201 ND 101.4 87.9 155.3 86.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 421 O REMARK 620 2 SER A 422 OG 84.3 REMARK 620 3 SER A 448 OG 93.4 93.8 REMARK 620 4 HOH A 666 O 86.2 170.5 87.5 REMARK 620 5 HOH A 672 O 174.5 90.6 89.2 98.8 REMARK 620 6 HOH A 674 O 86.1 91.3 174.9 87.4 91.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 367 O REMARK 620 2 ASN A 410 O 97.5 REMARK 620 3 HOH A 628 O 84.8 80.5 REMARK 620 4 HOH A 653 O 83.5 104.6 167.7 REMARK 620 5 HOH A 670 O 84.5 168.4 88.3 87.0 REMARK 620 6 HOH A 673 O 170.4 92.0 97.0 94.0 86.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 383 OH REMARK 620 2 HEM B 201 NA 100.9 REMARK 620 3 HEM B 201 NB 105.0 86.8 REMARK 620 4 HEM B 201 NC 105.0 154.1 86.8 REMARK 620 5 HEM B 201 ND 99.9 87.2 155.0 88.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 421 O REMARK 620 2 SER B 422 OG 83.3 REMARK 620 3 SER B 448 OG 95.0 93.0 REMARK 620 4 HOH B 664 O 89.8 172.7 90.0 REMARK 620 5 HOH B 678 O 169.5 87.0 89.2 99.8 REMARK 620 6 HOH B 679 O 88.7 87.9 176.2 89.6 87.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL B 367 O REMARK 620 2 ASN B 410 O 96.6 REMARK 620 3 HOH B 647 O 85.0 79.6 REMARK 620 4 HOH B 669 O 172.8 77.3 97.4 REMARK 620 5 HOH B 670 O 83.0 104.6 167.7 94.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 203 DBREF 6JSC A 364 529 UNP Q8NTB9 Q8NTB9_CORGL 372 537 DBREF 6JSC B 364 529 UNP Q8NTB9 Q8NTB9_CORGL 372 537 SEQADV 6JSC MET A 363 UNP Q8NTB9 INITIATING METHIONINE SEQADV 6JSC ALA A 434 UNP Q8NTB9 HIS 442 ENGINEERED MUTATION SEQADV 6JSC LEU A 530 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC GLU A 531 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS A 532 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS A 533 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS A 534 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS A 535 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS A 536 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS A 537 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC MET B 363 UNP Q8NTB9 INITIATING METHIONINE SEQADV 6JSC ALA B 434 UNP Q8NTB9 HIS 442 ENGINEERED MUTATION SEQADV 6JSC LEU B 530 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC GLU B 531 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS B 532 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS B 533 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS B 534 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS B 535 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS B 536 UNP Q8NTB9 EXPRESSION TAG SEQADV 6JSC HIS B 537 UNP Q8NTB9 EXPRESSION TAG SEQRES 1 A 175 MET SER LEU GLY VAL THR GLN ALA SER ALA GLN TRP GLY SEQRES 2 A 175 VAL LYS ALA SER PHE GLN ASN TYR ILE ARG GLY SER ILE SEQRES 3 A 175 ALA ASN GLY SER TRP THR LEU ASN GLY VAL GLY PHE ASP SEQRES 4 A 175 ASN GLN GLN PHE GLN PHE SER GLY ASN SER GLY ALA VAL SEQRES 5 A 175 ASP ALA GLU ASN LYS THR GLY SER ILE ASN PHE PRO GLY SEQRES 6 A 175 SER ILE HIS PHE THR GLY ALA GLY GLY ILE LEU ASP MET SEQRES 7 A 175 GLN ILE ALA ASN ILE GLU ILE SER PHE ASN GLY ASN SER SEQRES 8 A 175 GLY GLU LEU ILE ALA ASP VAL VAL SER SER ASP MET ASP SEQRES 9 A 175 GLY ASN SER THR ASN TYR GLY ARG THR VAL VAL GLY THR SEQRES 10 A 175 LEU ASN PHE SER ALA LEU ASN VAL SER ALA THR GLU ALA SEQRES 11 A 175 SER GLY SER ALA SER VAL SER LEU SER GLN SER GLY SER SEQRES 12 A 175 GLN ALA PHE ALA ASP PHE TYR THR PRO GLY THR GLN LEU SEQRES 13 A 175 ASP PRO ILE SER PHE SER ALA THR LEU GLY GLY LEU GLU SEQRES 14 A 175 HIS HIS HIS HIS HIS HIS SEQRES 1 B 175 MET SER LEU GLY VAL THR GLN ALA SER ALA GLN TRP GLY SEQRES 2 B 175 VAL LYS ALA SER PHE GLN ASN TYR ILE ARG GLY SER ILE SEQRES 3 B 175 ALA ASN GLY SER TRP THR LEU ASN GLY VAL GLY PHE ASP SEQRES 4 B 175 ASN GLN GLN PHE GLN PHE SER GLY ASN SER GLY ALA VAL SEQRES 5 B 175 ASP ALA GLU ASN LYS THR GLY SER ILE ASN PHE PRO GLY SEQRES 6 B 175 SER ILE HIS PHE THR GLY ALA GLY GLY ILE LEU ASP MET SEQRES 7 B 175 GLN ILE ALA ASN ILE GLU ILE SER PHE ASN GLY ASN SER SEQRES 8 B 175 GLY GLU LEU ILE ALA ASP VAL VAL SER SER ASP MET ASP SEQRES 9 B 175 GLY ASN SER THR ASN TYR GLY ARG THR VAL VAL GLY THR SEQRES 10 B 175 LEU ASN PHE SER ALA LEU ASN VAL SER ALA THR GLU ALA SEQRES 11 B 175 SER GLY SER ALA SER VAL SER LEU SER GLN SER GLY SER SEQRES 12 B 175 GLN ALA PHE ALA ASP PHE TYR THR PRO GLY THR GLN LEU SEQRES 13 B 175 ASP PRO ILE SER PHE SER ALA THR LEU GLY GLY LEU GLU SEQRES 14 B 175 HIS HIS HIS HIS HIS HIS HET HEM A 201 43 HET NA A 202 1 HET NA A 203 1 HET HEM B 201 43 HET NA B 202 1 HET NA B 203 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM NA SODIUM ION HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 NA 4(NA 1+) FORMUL 9 HOH *171(H2 O) HELIX 1 AA1 LYS A 377 GLY A 386 1 10 HELIX 2 AA2 ALA A 434 ILE A 437 5 4 HELIX 3 AA3 SER A 501 PHE A 508 1 8 HELIX 4 AA4 LYS B 377 GLY B 386 1 10 HELIX 5 AA5 ALA B 434 ILE B 437 5 4 HELIX 6 AA6 SER B 501 PHE B 508 1 8 SHEET 1 AA1 8 SER A 392 ASN A 396 0 SHEET 2 AA1 8 SER A 428 GLY A 433 -1 O THR A 432 N SER A 392 SHEET 3 AA1 8 LEU A 438 ASN A 450 -1 O MET A 440 N PHE A 431 SHEET 4 AA1 8 THR A 420 ASN A 424 -1 N ILE A 423 O ILE A 447 SHEET 5 AA1 8 SER A 411 ASP A 415 -1 N ASP A 415 O THR A 420 SHEET 6 AA1 8 LEU A 365 TRP A 374 -1 N LEU A 365 O VAL A 414 SHEET 7 AA1 8 GLN A 404 GLY A 409 -1 O GLY A 409 N ALA A 370 SHEET 8 AA1 8 GLY A 399 ASP A 401 -1 N GLY A 399 O GLN A 406 SHEET 1 AA210 SER A 392 ASN A 396 0 SHEET 2 AA210 SER A 428 GLY A 433 -1 O THR A 432 N SER A 392 SHEET 3 AA210 LEU A 438 ASN A 450 -1 O MET A 440 N PHE A 431 SHEET 4 AA210 SER A 453 SER A 463 -1 O VAL A 461 N GLN A 441 SHEET 5 AA210 SER A 469 VAL A 487 -1 O GLY A 478 N LEU A 456 SHEET 6 AA210 GLU A 491 LEU A 500 -1 O SER A 493 N ASN A 486 SHEET 7 AA210 ILE A 521 GLY A 528 -1 O ILE A 521 N ALA A 496 SHEET 8 AA210 LEU A 365 TRP A 374 -1 N THR A 368 O THR A 526 SHEET 9 AA210 GLN A 404 GLY A 409 -1 O GLY A 409 N ALA A 370 SHEET 10 AA210 GLY A 399 ASP A 401 -1 N GLY A 399 O GLN A 406 SHEET 1 AA3 8 SER B 392 ASN B 396 0 SHEET 2 AA3 8 SER B 428 GLY B 433 -1 O HIS B 430 N THR B 394 SHEET 3 AA3 8 LEU B 438 ASN B 450 -1 O MET B 440 N PHE B 431 SHEET 4 AA3 8 THR B 420 ASN B 424 -1 N GLY B 421 O PHE B 449 SHEET 5 AA3 8 SER B 411 ASP B 415 -1 N ASP B 415 O THR B 420 SHEET 6 AA3 8 LEU B 365 TRP B 374 -1 N LEU B 365 O VAL B 414 SHEET 7 AA3 8 GLN B 404 GLY B 409 -1 O GLY B 409 N ALA B 370 SHEET 8 AA3 8 GLY B 399 ASP B 401 -1 N GLY B 399 O GLN B 406 SHEET 1 AA410 SER B 392 ASN B 396 0 SHEET 2 AA410 SER B 428 GLY B 433 -1 O HIS B 430 N THR B 394 SHEET 3 AA410 LEU B 438 ASN B 450 -1 O MET B 440 N PHE B 431 SHEET 4 AA410 SER B 453 SER B 463 -1 O ASP B 459 N ALA B 443 SHEET 5 AA410 SER B 469 VAL B 487 -1 O GLY B 478 N LEU B 456 SHEET 6 AA410 GLU B 491 LEU B 500 -1 O SER B 493 N ASN B 486 SHEET 7 AA410 ILE B 521 LEU B 530 -1 O ILE B 521 N ALA B 496 SHEET 8 AA410 LEU B 365 TRP B 374 -1 N THR B 368 O THR B 526 SHEET 9 AA410 GLN B 404 GLY B 409 -1 O GLY B 409 N ALA B 370 SHEET 10 AA410 GLY B 399 ASP B 401 -1 N GLY B 399 O GLN B 406 LINK FE HEM A 201 OH TYR A 383 1555 1555 2.12 LINK NA NA A 202 O GLY A 421 1555 1555 2.64 LINK NA NA A 202 OG SER A 422 1555 1555 2.46 LINK NA NA A 202 OG SER A 448 1555 1555 2.37 LINK NA NA A 202 O HOH A 666 1555 1555 2.32 LINK NA NA A 202 O HOH A 672 1555 1555 2.38 LINK NA NA A 202 O HOH A 674 1555 1555 2.39 LINK NA NA A 203 O VAL A 367 1555 1555 2.27 LINK NA NA A 203 O ASN A 410 1555 1555 2.38 LINK NA NA A 203 O HOH A 628 1555 1555 2.46 LINK NA NA A 203 O HOH A 653 1555 1555 2.47 LINK NA NA A 203 O HOH A 670 1555 1555 2.41 LINK NA NA A 203 O HOH A 673 1555 1555 2.39 LINK FE HEM B 201 OH TYR B 383 1555 1555 2.14 LINK NA NA B 202 O GLY B 421 1555 1555 2.48 LINK NA NA B 202 OG SER B 422 1555 1555 2.36 LINK NA NA B 202 OG SER B 448 1555 1555 2.40 LINK NA NA B 202 O HOH B 664 1555 1555 2.34 LINK NA NA B 202 O HOH B 678 1555 1555 2.48 LINK NA NA B 202 O HOH B 679 1555 1555 2.49 LINK NA NA B 203 O VAL B 367 1555 1555 2.29 LINK NA NA B 203 O ASN B 410 1555 1555 2.40 LINK NA NA B 203 O HOH B 647 1555 1555 2.39 LINK NA NA B 203 O HOH B 669 1555 1555 2.38 LINK NA NA B 203 O HOH B 670 1555 1555 2.40 SITE 1 AC1 14 SER A 379 PHE A 380 TYR A 383 LEU A 438 SITE 2 AC1 14 SER A 463 MET A 465 ALA A 507 ALA A 509 SITE 3 AC1 14 PHE A 511 TYR A 512 HOH A 630 LEU B 365 SITE 4 AC1 14 GLU B 417 ALA B 489 SITE 1 AC2 6 GLY A 421 SER A 422 SER A 448 HOH A 666 SITE 2 AC2 6 HOH A 672 HOH A 674 SITE 1 AC3 6 VAL A 367 ASN A 410 HOH A 628 HOH A 653 SITE 2 AC3 6 HOH A 670 HOH A 673 SITE 1 AC4 12 ALA A 489 SER B 379 PHE B 380 TYR B 383 SITE 2 AC4 12 ILE B 437 LEU B 438 SER B 463 MET B 465 SITE 3 AC4 12 PHE B 508 ALA B 509 PHE B 511 TYR B 512 SITE 1 AC5 6 GLY B 421 SER B 422 SER B 448 HOH B 664 SITE 2 AC5 6 HOH B 678 HOH B 679 SITE 1 AC6 5 VAL B 367 ASN B 410 HOH B 647 HOH B 669 SITE 2 AC6 5 HOH B 670 CRYST1 39.040 43.150 199.440 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025615 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023175 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005014 0.00000