HEADER OXIDOREDUCTASE 13-APR-19 6JU8 TITLE ASPERGILLUS ORYZAE ACTIVE-TYROSINASE COPPER-BOUND C92A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.14.18.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; SOURCE 3 ORGANISM_COMMON: YELLOW KOJI MOLD; SOURCE 4 ORGANISM_TAXID: 5062; SOURCE 5 GENE: OAORY_01107480; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TYROSINASE, COPPER ENZYME, DINUCLEAR COPPER CENTER, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.FUJIEDA,K.UMAKOSHI,Y.NISHIKAWA,G.KURISU,S.ITOH REVDAT 3 22-NOV-23 6JU8 1 REMARK REVDAT 2 12-AUG-20 6JU8 1 JRNL LINK REVDAT 1 13-MAY-20 6JU8 0 JRNL AUTH N.FUJIEDA,K.UMAKOSHI,Y.OCHI,Y.NISHIKAWA,S.YANAGISAWA,M.KUBO, JRNL AUTH 2 G.KURISU,S.ITOH JRNL TITL COPPER-OXYGEN DYNAMICS IN THE TYROSINASE MECHANISM. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 59 13385 2020 JRNL REFN ESSN 1521-3773 JRNL PMID 32356371 JRNL DOI 10.1002/ANIE.202004733 REMARK 2 REMARK 2 RESOLUTION. 1.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL 2017/1 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.158 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 11285 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6992 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 861 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 7855.2 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 65 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 ANGLE DISTANCES (A) : 0.020 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.385 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.069 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.070 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.000 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.026 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.042 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : NULL REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JU8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-APR-19. REMARK 100 THE DEPOSITION ID IS D_1300011814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.900 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 229646 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.270 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3W6W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% POLYETHYLENE GLYCOL (PEG) 3350, REMARK 280 30MM NH4NO3, PH 7.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.07650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.19100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.24100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.19100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.07650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.24100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 GLY A 0 REMARK 465 HIS A 156 REMARK 465 ASP A 157 REMARK 465 ASN A 158 REMARK 465 THR A 159 REMARK 465 GLN A 160 REMARK 465 GLU A 308 REMARK 465 THR A 309 REMARK 465 GLN A 310 REMARK 465 PRO A 311 REMARK 465 LYS A 312 REMARK 465 ASN A 313 REMARK 465 ASN A 314 REMARK 465 GLU A 315 REMARK 465 GLN A 316 REMARK 465 ALA A 317 REMARK 465 PRO A 318 REMARK 465 GLN A 454 REMARK 465 ARG A 455 REMARK 465 THR A 456 REMARK 465 LYS A 457 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 LYS B 82 REMARK 465 ASP B 83 REMARK 465 SER B 84 REMARK 465 LYS B 85 REMARK 465 HIS B 156 REMARK 465 ASP B 157 REMARK 465 ASN B 158 REMARK 465 THR B 159 REMARK 465 GLN B 160 REMARK 465 GLY B 161 REMARK 465 ASP B 304 REMARK 465 LYS B 305 REMARK 465 LYS B 306 REMARK 465 GLU B 307 REMARK 465 GLU B 308 REMARK 465 THR B 309 REMARK 465 GLN B 310 REMARK 465 PRO B 311 REMARK 465 LYS B 312 REMARK 465 ASN B 313 REMARK 465 ASN B 314 REMARK 465 GLU B 315 REMARK 465 GLN B 316 REMARK 465 ARG B 455 REMARK 465 THR B 456 REMARK 465 LYS B 457 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 1 OG REMARK 470 LYS A 10 CG CD CE NZ REMARK 470 PRO A 12 CG CD REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 GLN A 81 CG CD OE1 NE2 REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 LYS A 85 CD CE NZ REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 GLN A 128 CG CD OE1 NE2 REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 PRO A 183 CB CG CD REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 ARG A 207 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 305 CG CD CE NZ REMARK 470 LYS A 306 CG CD CE NZ REMARK 470 LYS A 319 CB CG CD CE NZ REMARK 470 ARG A 345 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 412 CG CD OE1 OE2 REMARK 470 LYS A 413 CB CG CD CE NZ REMARK 470 ARG A 415 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 439 CD CE NZ REMARK 470 LYS A 446 CG CD CE NZ REMARK 470 GLN B 81 CG CD OE1 NE2 REMARK 470 ASN B 87 CG OD1 ND2 REMARK 470 ARG B 153 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 154 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 185 CG CD CE NZ REMARK 470 GLN B 199 CG CD OE1 NE2 REMARK 470 ARG B 207 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 271 CG OD1 OD2 REMARK 470 ARG B 301 NE CZ NH1 NH2 REMARK 470 ARG B 345 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 394 CG OD1 OD2 REMARK 470 LYS B 397 CG CD CE NZ REMARK 470 GLU B 412 CG CD OE1 OE2 REMARK 470 LYS B 413 CG CD CE NZ REMARK 470 THR B 414 OG1 CG2 REMARK 470 ARG B 415 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 416 CG CD CE NZ REMARK 470 GLN B 454 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CU CU A 501 O HOH A 770 1.66 REMARK 500 O HOH B 710 O HOH B 713 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 429 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 150 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 409 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 443 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 16 71.64 25.60 REMARK 500 ALA A 32 50.75 -101.19 REMARK 500 TRP A 71 46.22 70.99 REMARK 500 PRO A 208 30.21 -96.93 REMARK 500 TYR A 236 -0.43 71.47 REMARK 500 TRP A 390 97.43 -160.55 REMARK 500 LEU B 16 69.47 32.18 REMARK 500 GLN B 182 77.61 -117.72 REMARK 500 HIS B 219 55.02 35.90 REMARK 500 ASN B 392 29.33 -143.48 REMARK 500 GLU B 412 45.59 -84.37 REMARK 500 LYS B 413 -52.36 -146.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 501 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 NE2 REMARK 620 2 HIS A 94 NE2 100.8 REMARK 620 3 HIS A 103 NE2 134.0 122.6 REMARK 620 4 HOH A 770 O 86.0 87.3 108.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 501 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 67 NE2 REMARK 620 2 HIS A 94 NE2 104.6 REMARK 620 3 HOH A 985 O 111.4 138.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 502 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 328 NE2 REMARK 620 2 HIS A 332 NE2 97.0 REMARK 620 3 HIS A 372 NE2 99.8 110.4 REMARK 620 4 HOH A 770 O 127.9 121.0 98.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 502 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 328 NE2 REMARK 620 2 HIS A 332 NE2 97.7 REMARK 620 3 HIS A 372 NE2 98.2 141.7 REMARK 620 4 HOH A 770 O 99.2 117.6 93.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 501 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 67 NE2 REMARK 620 2 HIS B 94 NE2 99.8 REMARK 620 3 HOH B 710 O 155.3 94.4 REMARK 620 4 HOH B 713 O 85.9 112.1 70.1 REMARK 620 5 HOH B 918 O 112.9 139.3 65.3 94.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 501 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 67 NE2 REMARK 620 2 HIS B 94 NE2 98.1 REMARK 620 3 HIS B 103 NE2 132.9 125.9 REMARK 620 4 HOH B 713 O 84.8 92.9 106.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 502 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 328 NE2 REMARK 620 2 HIS B 332 NE2 96.7 REMARK 620 3 HIS B 372 NE2 99.4 144.3 REMARK 620 4 HOH B 713 O 103.2 117.2 89.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 502 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 328 NE2 REMARK 620 2 HIS B 332 NE2 94.1 REMARK 620 3 HIS B 372 NE2 100.4 109.0 REMARK 620 4 HOH B 710 O 96.3 95.4 149.2 REMARK 620 5 HOH B 713 O 137.3 118.7 94.0 56.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 502 DBREF1 6JU8 A 2 457 UNP A0A1S9DK56_ASPOZ DBREF2 6JU8 A A0A1S9DK56 2 457 DBREF1 6JU8 B 2 457 UNP A0A1S9DK56_ASPOZ DBREF2 6JU8 B A0A1S9DK56 2 457 SEQADV 6JU8 GLY A -3 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 PRO A -2 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 GLY A -1 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 GLY A 0 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 SER A 1 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 ALA A 92 UNP A0A1S9DK5 CYS 92 ENGINEERED MUTATION SEQADV 6JU8 GLY B -3 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 PRO B -2 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 GLY B -1 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 GLY B 0 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 SER B 1 UNP A0A1S9DK5 EXPRESSION TAG SEQADV 6JU8 ALA B 92 UNP A0A1S9DK5 CYS 92 ENGINEERED MUTATION SEQRES 1 A 461 GLY PRO GLY GLY SER PRO TYR LEU ILE THR GLY ILE PRO SEQRES 2 A 461 LYS ASP PRO LYS HIS PRO LEU PRO ILE ARG LYS ASP ILE SEQRES 3 A 461 ASP ASP TRP TYR LEU GLU GLN THR SER ALA GLY SER ASN SEQRES 4 A 461 ARG ILE GLN LEU THR LEU PHE VAL GLU ALA LEU THR VAL SEQRES 5 A 461 ILE GLN ASN ARG PRO LEU ASN ASP GLN LEU SER TYR PHE SEQRES 6 A 461 ARG LEU ALA GLY ILE HIS GLY ALA PRO TRP THR GLU TRP SEQRES 7 A 461 ASP GLY VAL PRO GLY GLY GLN LYS ASP SER LYS GLY ASN SEQRES 8 A 461 PRO THR GLY PHE ALA VAL HIS ASN ASN TYR THR PHE PRO SEQRES 9 A 461 THR TRP HIS ARG VAL TYR VAL THR LEU TYR GLU GLN VAL SEQRES 10 A 461 ILE TYR GLU ALA MET LEU ASP PHE ILE LYS GLN ASN VAL SEQRES 11 A 461 PRO GLN ASN GLY LYS ALA ASP TRP GLU ASN GLU ALA LYS SEQRES 12 A 461 GLN TRP ARG LEU PRO TYR TRP ASP PHE ALA ARG PHE ALA SEQRES 13 A 461 ARG HIS GLY HIS ASP ASN THR GLN GLY ASP GLU LEU ARG SEQRES 14 A 461 LEU PRO ILE LEU VAL THR MET PRO MET VAL LYS VAL LEU SEQRES 15 A 461 VAL PRO GLY GLN PRO GLY LYS GLN LEU SER LYS PRO ASN SEQRES 16 A 461 PRO LEU TYR ARG PHE GLN MET GLN THR LEU MET GLY THR SEQRES 17 A 461 LEU GLU ARG PRO TYR ALA ILE THR SER GLN LYS THR GLU SEQRES 18 A 461 GLU HIS GLY TRP SER PHE ASP LEU PRO PHE ASP LYS CYS SEQRES 19 A 461 GLN SER THR THR LYS TYR GLY LEU LEU GLU ASN TYR ASN SEQRES 20 A 461 ALA ASP VAL TRP ALA ASP GLY GLY GLN ASN TRP LEU ARG SEQRES 21 A 461 ALA ASN LEU ALA LEU ASN GLU HIS PRO TRP TYR GLN ASN SEQRES 22 A 461 LEU ASP GLY TRP ASP SER VAL PRO THR LEU GLN ASP MET SEQRES 23 A 461 THR PHE ARG LEU LEU THR THR GLY GLY LEU ASN TRP GLY SEQRES 24 A 461 GLU PHE SER SER THR ARG TYR ASP ASP LYS LYS GLU GLU SEQRES 25 A 461 THR GLN PRO LYS ASN ASN GLU GLN ALA PRO LYS ASN TRP SEQRES 26 A 461 MET ASN LEU GLU ALA ILE HIS ASN ASN VAL HIS ASN TRP SEQRES 27 A 461 VAL GLY GLY PHE MET PHE SER ARG PRO GLY ARG HIS ASP SEQRES 28 A 461 LEU LYS LEU TRP GLY ALA GLY HIS MET SER SER VAL PRO SEQRES 29 A 461 VAL ALA ALA TYR ASP PRO ILE PHE TRP LEU HIS HIS CYS SEQRES 30 A 461 ASN ILE ASP ARG LEU THR ALA ILE TRP GLN THR VAL ASN SEQRES 31 A 461 SER GLY SER TRP PHE ASN ASP ASP LYS SER LYS VAL SER SEQRES 32 A 461 LYS ASP ASP ASP LEU ARG PRO PHE HIS ARG PHE CYS GLU SEQRES 33 A 461 LYS THR ARG LYS VAL VAL PHE PHE ARG SER ASP ASP VAL SEQRES 34 A 461 LYS ASP TRP ARG SER LEU ASN TYR ASP TYR ALA ILE THR SEQRES 35 A 461 LYS ASP ALA SER ARG ILE ARG LYS GLU ILE SER ASP LEU SEQRES 36 A 461 TYR GLY GLN ARG THR LYS SEQRES 1 B 461 GLY PRO GLY GLY SER PRO TYR LEU ILE THR GLY ILE PRO SEQRES 2 B 461 LYS ASP PRO LYS HIS PRO LEU PRO ILE ARG LYS ASP ILE SEQRES 3 B 461 ASP ASP TRP TYR LEU GLU GLN THR SER ALA GLY SER ASN SEQRES 4 B 461 ARG ILE GLN LEU THR LEU PHE VAL GLU ALA LEU THR VAL SEQRES 5 B 461 ILE GLN ASN ARG PRO LEU ASN ASP GLN LEU SER TYR PHE SEQRES 6 B 461 ARG LEU ALA GLY ILE HIS GLY ALA PRO TRP THR GLU TRP SEQRES 7 B 461 ASP GLY VAL PRO GLY GLY GLN LYS ASP SER LYS GLY ASN SEQRES 8 B 461 PRO THR GLY PHE ALA VAL HIS ASN ASN TYR THR PHE PRO SEQRES 9 B 461 THR TRP HIS ARG VAL TYR VAL THR LEU TYR GLU GLN VAL SEQRES 10 B 461 ILE TYR GLU ALA MET LEU ASP PHE ILE LYS GLN ASN VAL SEQRES 11 B 461 PRO GLN ASN GLY LYS ALA ASP TRP GLU ASN GLU ALA LYS SEQRES 12 B 461 GLN TRP ARG LEU PRO TYR TRP ASP PHE ALA ARG PHE ALA SEQRES 13 B 461 ARG HIS GLY HIS ASP ASN THR GLN GLY ASP GLU LEU ARG SEQRES 14 B 461 LEU PRO ILE LEU VAL THR MET PRO MET VAL LYS VAL LEU SEQRES 15 B 461 VAL PRO GLY GLN PRO GLY LYS GLN LEU SER LYS PRO ASN SEQRES 16 B 461 PRO LEU TYR ARG PHE GLN MET GLN THR LEU MET GLY THR SEQRES 17 B 461 LEU GLU ARG PRO TYR ALA ILE THR SER GLN LYS THR GLU SEQRES 18 B 461 GLU HIS GLY TRP SER PHE ASP LEU PRO PHE ASP LYS CYS SEQRES 19 B 461 GLN SER THR THR LYS TYR GLY LEU LEU GLU ASN TYR ASN SEQRES 20 B 461 ALA ASP VAL TRP ALA ASP GLY GLY GLN ASN TRP LEU ARG SEQRES 21 B 461 ALA ASN LEU ALA LEU ASN GLU HIS PRO TRP TYR GLN ASN SEQRES 22 B 461 LEU ASP GLY TRP ASP SER VAL PRO THR LEU GLN ASP MET SEQRES 23 B 461 THR PHE ARG LEU LEU THR THR GLY GLY LEU ASN TRP GLY SEQRES 24 B 461 GLU PHE SER SER THR ARG TYR ASP ASP LYS LYS GLU GLU SEQRES 25 B 461 THR GLN PRO LYS ASN ASN GLU GLN ALA PRO LYS ASN TRP SEQRES 26 B 461 MET ASN LEU GLU ALA ILE HIS ASN ASN VAL HIS ASN TRP SEQRES 27 B 461 VAL GLY GLY PHE MET PHE SER ARG PRO GLY ARG HIS ASP SEQRES 28 B 461 LEU LYS LEU TRP GLY ALA GLY HIS MET SER SER VAL PRO SEQRES 29 B 461 VAL ALA ALA TYR ASP PRO ILE PHE TRP LEU HIS HIS CYS SEQRES 30 B 461 ASN ILE ASP ARG LEU THR ALA ILE TRP GLN THR VAL ASN SEQRES 31 B 461 SER GLY SER TRP PHE ASN ASP ASP LYS SER LYS VAL SER SEQRES 32 B 461 LYS ASP ASP ASP LEU ARG PRO PHE HIS ARG PHE CYS GLU SEQRES 33 B 461 LYS THR ARG LYS VAL VAL PHE PHE ARG SER ASP ASP VAL SEQRES 34 B 461 LYS ASP TRP ARG SER LEU ASN TYR ASP TYR ALA ILE THR SEQRES 35 B 461 LYS ASP ALA SER ARG ILE ARG LYS GLU ILE SER ASP LEU SEQRES 36 B 461 TYR GLY GLN ARG THR LYS HET CU A 501 2 HET CU A 502 2 HET NO3 A 503 4 HET CU B 501 2 HET CU B 502 2 HETNAM CU COPPER (II) ION HETNAM NO3 NITRATE ION FORMUL 3 CU 4(CU 2+) FORMUL 5 NO3 N O3 1- FORMUL 8 HOH *861(H2 O) HELIX 1 AA1 ASP A 21 SER A 31 1 11 HELIX 2 AA2 ARG A 36 ARG A 52 1 17 HELIX 3 AA3 SER A 59 ILE A 66 1 8 HELIX 4 AA4 THR A 98 VAL A 126 1 29 HELIX 5 AA5 PRO A 127 ASN A 129 5 3 HELIX 6 AA6 GLY A 130 TRP A 141 1 12 HELIX 7 AA7 ILE A 168 MET A 172 5 5 HELIX 8 AA8 LEU A 201 LEU A 205 5 5 HELIX 9 AA9 PRO A 226 CYS A 230 5 5 HELIX 10 AB1 ASN A 243 ALA A 248 1 6 HELIX 11 AB2 ASN A 253 HIS A 264 1 12 HELIX 12 AB3 THR A 278 THR A 289 1 12 HELIX 13 AB4 ASN A 293 SER A 299 1 7 HELIX 14 AB5 ASP A 303 GLU A 307 5 5 HELIX 15 AB6 ASN A 323 GLY A 337 1 15 HELIX 16 AB7 GLY A 344 TRP A 351 5 8 HELIX 17 AB8 HIS A 355 SER A 358 5 4 HELIX 18 AB9 VAL A 361 ASP A 365 5 5 HELIX 19 AC1 PRO A 366 ASN A 386 1 21 HELIX 20 AC2 LYS A 395 LYS A 400 5 6 HELIX 21 AC3 ARG A 421 LYS A 426 5 6 HELIX 22 AC4 ASP A 427 ASN A 432 5 6 HELIX 23 AC5 TYR A 435 LYS A 439 5 5 HELIX 24 AC6 ARG A 443 GLY A 453 1 11 HELIX 25 AC7 ASP B 21 THR B 30 1 10 HELIX 26 AC8 ARG B 36 ARG B 52 1 17 HELIX 27 AC9 SER B 59 ILE B 66 1 8 HELIX 28 AD1 THR B 98 VAL B 126 1 29 HELIX 29 AD2 PRO B 127 ASN B 129 5 3 HELIX 30 AD3 GLY B 130 TRP B 141 1 12 HELIX 31 AD4 ILE B 168 MET B 172 5 5 HELIX 32 AD5 LEU B 201 LEU B 205 5 5 HELIX 33 AD6 PRO B 226 CYS B 230 5 5 HELIX 34 AD7 ASN B 243 ALA B 248 1 6 HELIX 35 AD8 ASN B 253 HIS B 264 1 12 HELIX 36 AD9 THR B 278 THR B 289 1 12 HELIX 37 AE1 ASN B 293 SER B 299 1 7 HELIX 38 AE2 THR B 300 ASP B 303 5 4 HELIX 39 AE3 ASN B 323 GLY B 337 1 15 HELIX 40 AE4 GLY B 344 TRP B 351 5 8 HELIX 41 AE5 HIS B 355 SER B 358 5 4 HELIX 42 AE6 VAL B 361 ASP B 365 5 5 HELIX 43 AE7 PRO B 366 ASN B 386 1 21 HELIX 44 AE8 LYS B 395 LYS B 400 5 6 HELIX 45 AE9 ARG B 421 LYS B 426 5 6 HELIX 46 AF1 ASP B 427 ASN B 432 5 6 HELIX 47 AF2 ALA B 436 ASP B 440 1 5 HELIX 48 AF3 ARG B 443 GLY B 453 1 11 SHEET 1 AA1 2 MET A 174 LEU A 178 0 SHEET 2 AA1 2 GLN A 186 PRO A 190 -1 O LEU A 187 N VAL A 177 SHEET 1 AA2 2 GLN A 214 GLU A 218 0 SHEET 2 AA2 2 TRP A 221 LEU A 225 -1 O PHE A 223 N THR A 216 SHEET 1 AA3 2 PHE A 338 MET A 339 0 SHEET 2 AA3 2 GLY A 352 ALA A 353 -1 O GLY A 352 N MET A 339 SHEET 1 AA4 2 HIS A 408 CYS A 411 0 SHEET 2 AA4 2 LYS A 416 PHE A 419 -1 O LYS A 416 N CYS A 411 SHEET 1 AA5 2 ILE B 18 ARG B 19 0 SHEET 2 AA5 2 ASP B 434 TYR B 435 1 O ASP B 434 N ARG B 19 SHEET 1 AA6 2 MET B 174 LEU B 178 0 SHEET 2 AA6 2 GLN B 186 PRO B 190 -1 O LEU B 187 N VAL B 177 SHEET 1 AA7 2 GLN B 214 GLU B 218 0 SHEET 2 AA7 2 TRP B 221 LEU B 225 -1 O LEU B 225 N GLN B 214 SHEET 1 AA8 2 PHE B 338 MET B 339 0 SHEET 2 AA8 2 GLY B 352 ALA B 353 -1 O GLY B 352 N MET B 339 SHEET 1 AA9 2 HIS B 408 PHE B 410 0 SHEET 2 AA9 2 VAL B 417 PHE B 419 -1 O VAL B 418 N ARG B 409 LINK NE2 HIS A 67 CU A CU A 501 1555 1555 2.13 LINK NE2 HIS A 67 CU B CU A 501 1555 1555 2.21 LINK NE2 HIS A 94 CU A CU A 501 1555 1555 2.21 LINK NE2 HIS A 94 CU B CU A 501 1555 1555 2.02 LINK NE2 HIS A 103 CU A CU A 501 1555 1555 2.00 LINK NE2 HIS A 328 CU B CU A 502 1555 1555 1.89 LINK NE2 HIS A 328 CU A CU A 502 1555 1555 2.18 LINK NE2 HIS A 332 CU B CU A 502 1555 1555 2.21 LINK NE2 HIS A 332 CU A CU A 502 1555 1555 1.89 LINK NE2 HIS A 372 CU B CU A 502 1555 1555 2.11 LINK NE2 HIS A 372 CU A CU A 502 1555 1555 1.86 LINK CU A CU A 501 O HOH A 770 1555 1555 1.93 LINK CU B CU A 501 O HOH A 985 1555 1555 2.22 LINK CU B CU A 502 O HOH A 770 1555 1555 1.89 LINK CU A CU A 502 O HOH A 770 1555 1555 2.27 LINK NE2 HIS B 67 CU B CU B 501 1555 1555 2.24 LINK NE2 HIS B 67 CU A CU B 501 1555 1555 2.04 LINK NE2 HIS B 94 CU B CU B 501 1555 1555 1.96 LINK NE2 HIS B 94 CU A CU B 501 1555 1555 2.21 LINK NE2 HIS B 103 CU A CU B 501 1555 1555 2.01 LINK NE2 HIS B 328 CU A CU B 502 1555 1555 2.22 LINK NE2 HIS B 328 CU B CU B 502 1555 1555 1.92 LINK NE2 HIS B 332 CU A CU B 502 1555 1555 1.92 LINK NE2 HIS B 332 CU B CU B 502 1555 1555 2.29 LINK NE2 HIS B 372 CU A CU B 502 1555 1555 1.91 LINK NE2 HIS B 372 CU B CU B 502 1555 1555 2.18 LINK CU B CU B 501 O HOH B 710 1555 1555 1.76 LINK CU A CU B 501 O HOH B 713 1555 1555 2.01 LINK CU B CU B 501 O HOH B 713 1555 1555 1.73 LINK CU B CU B 501 O HOH B 918 1555 1555 2.34 LINK CU B CU B 502 O HOH B 710 1555 1555 2.27 LINK CU A CU B 502 O HOH B 713 1555 1555 2.27 LINK CU B CU B 502 O HOH B 713 1555 1555 1.86 CISPEP 1 SER A 1 PRO A 2 0 1.58 CISPEP 2 ALA A 69 PRO A 70 0 7.78 CISPEP 3 ARG A 207 PRO A 208 0 0.59 CISPEP 4 ARG A 405 PRO A 406 0 6.54 CISPEP 5 ALA B 69 PRO B 70 0 4.98 CISPEP 6 ARG B 207 PRO B 208 0 2.27 CISPEP 7 ARG B 405 PRO B 406 0 2.72 SITE 1 AC1 6 HIS A 67 HIS A 94 HIS A 103 CU A 502 SITE 2 AC1 6 HOH A 770 HOH A 985 SITE 1 AC2 5 HIS A 328 HIS A 332 HIS A 372 CU A 501 SITE 2 AC2 5 HOH A 770 SITE 1 AC3 9 ASN A 253 LEU A 255 ARG A 256 HOH A 755 SITE 2 AC3 9 ASN B 253 LEU B 255 ARG B 256 HOH B 695 SITE 3 AC3 9 HOH B 857 SITE 1 AC4 7 HIS B 67 HIS B 94 HIS B 103 CU B 502 SITE 2 AC4 7 HOH B 710 HOH B 713 HOH B 918 SITE 1 AC5 6 HIS B 328 HIS B 332 HIS B 372 CU B 501 SITE 2 AC5 6 HOH B 710 HOH B 713 CRYST1 54.153 104.482 154.382 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018466 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009571 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006477 0.00000