HEADER REPLICATION/DNA 15-APR-19 6JUM TITLE MSDPO4-DNA COMPLEX 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A, F; COMPND 4 SYNONYM: POL IV; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(P*TP*AP*GP*GP*AP*CP*CP*C)-3'); COMPND 10 CHAIN: H, G, C, B; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: DNA PRIMER SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 VARIANT: ATCC 700084 / MC(2)155; SOURCE 7 GENE: DINB, MSMEG_1014, MSMEG_2294; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_VARIANT: C41DE3; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 14 ORGANISM_TAXID: 1772 KEYWDS DNA POLYMERASE, REPLICATION, REPLICATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.T.NAIR,M.J.JOHNSON REVDAT 3 22-NOV-23 6JUM 1 LINK REVDAT 2 26-FEB-20 6JUM 1 REMARK REVDAT 1 19-FEB-20 6JUM 0 JRNL AUTH M.K.JOHNSON,J.KOTTUR,D.T.NAIR JRNL TITL A POLAR FILTER IN DNA POLYMERASES PREVENTS RIBONUCLEOTIDE JRNL TITL 2 INCORPORATION. JRNL REF NUCLEIC ACIDS RES. V. 47 10693 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31544946 JRNL DOI 10.1093/NAR/GKZ792 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 85085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 4626 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6180 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 352 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5292 REMARK 3 NUCLEIC ACID ATOMS : 882 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 694 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.51000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : 0.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.245 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6430 ; 0.026 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 5723 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8947 ; 2.245 ; 1.851 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13192 ; 1.260 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 692 ; 6.234 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 217 ;31.361 ;22.811 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 875 ;14.052 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 54 ;14.967 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 999 ; 0.163 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6580 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1376 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2774 ; 1.572 ; 1.406 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2773 ; 1.572 ; 1.404 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3464 ; 2.549 ; 2.096 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3465 ; 2.549 ; 2.099 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3656 ; 2.472 ; 2.144 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3655 ; 2.471 ; 2.144 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5484 ; 3.802 ; 3.132 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7596 ; 7.168 ;21.446 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7373 ; 7.028 ;20.310 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 79 REMARK 3 ORIGIN FOR THE GROUP (A): -14.0297 -61.4817 23.0297 REMARK 3 T TENSOR REMARK 3 T11: 0.1282 T22: 0.1620 REMARK 3 T33: 0.1672 T12: 0.0100 REMARK 3 T13: -0.0145 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 0.5489 L22: 1.0485 REMARK 3 L33: 0.6943 L12: 0.6964 REMARK 3 L13: 0.3282 L23: 0.2229 REMARK 3 S TENSOR REMARK 3 S11: -0.0227 S12: 0.0223 S13: -0.0501 REMARK 3 S21: -0.0037 S22: -0.0209 S23: 0.0214 REMARK 3 S31: -0.0458 S32: 0.0560 S33: 0.0436 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 10 REMARK 3 RESIDUE RANGE : A 80 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): -38.8312 -61.6021 28.4290 REMARK 3 T TENSOR REMARK 3 T11: 0.1260 T22: 0.1744 REMARK 3 T33: 0.2161 T12: 0.0116 REMARK 3 T13: -0.0172 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.4335 L22: 0.0462 REMARK 3 L33: 0.3739 L12: -0.0660 REMARK 3 L13: -0.4012 L23: 0.1208 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: 0.0782 S13: -0.2865 REMARK 3 S21: -0.0181 S22: -0.0118 S23: -0.0261 REMARK 3 S31: -0.0914 S32: -0.0242 S33: 0.0011 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): -37.1837 -38.9978 30.5408 REMARK 3 T TENSOR REMARK 3 T11: 0.1880 T22: 0.1783 REMARK 3 T33: 0.1384 T12: -0.0085 REMARK 3 T13: 0.0022 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.2366 L22: 0.4832 REMARK 3 L33: 0.1412 L12: 0.1206 REMARK 3 L13: -0.1206 L23: 0.1181 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: -0.0097 S13: -0.0349 REMARK 3 S21: -0.0325 S22: -0.0001 S23: -0.0096 REMARK 3 S31: -0.0250 S32: 0.0125 S33: -0.0036 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 347 REMARK 3 ORIGIN FOR THE GROUP (A): -23.0539 -44.7869 -0.3429 REMARK 3 T TENSOR REMARK 3 T11: 0.1805 T22: 0.2304 REMARK 3 T33: 0.1152 T12: -0.0442 REMARK 3 T13: -0.0323 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 0.8944 L22: 0.7059 REMARK 3 L33: 1.6587 L12: 0.2147 REMARK 3 L13: 0.6123 L23: -0.7325 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: 0.1282 S13: 0.0175 REMARK 3 S21: 0.0623 S22: -0.0801 S23: -0.0260 REMARK 3 S31: -0.1298 S32: 0.1886 S33: 0.1220 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 838 B 850 REMARK 3 RESIDUE RANGE : C 864 C 873 REMARK 3 ORIGIN FOR THE GROUP (A): -28.2293 -39.9242 13.0504 REMARK 3 T TENSOR REMARK 3 T11: 0.2934 T22: 0.2483 REMARK 3 T33: 0.1008 T12: 0.0645 REMARK 3 T13: -0.0633 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 1.0554 L22: 1.8034 REMARK 3 L33: 0.2482 L12: 1.3762 REMARK 3 L13: -0.5096 L23: -0.6639 REMARK 3 S TENSOR REMARK 3 S11: 0.1354 S12: -0.0269 S13: 0.0650 REMARK 3 S21: 0.2246 S22: -0.0757 S23: 0.1088 REMARK 3 S31: -0.0842 S32: 0.0327 S33: -0.0597 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 11 F 79 REMARK 3 ORIGIN FOR THE GROUP (A): -24.5148 -18.7051 46.7115 REMARK 3 T TENSOR REMARK 3 T11: 0.1419 T22: 0.2123 REMARK 3 T33: 0.1289 T12: -0.0220 REMARK 3 T13: 0.0094 T23: -0.0676 REMARK 3 L TENSOR REMARK 3 L11: 0.8767 L22: 0.3924 REMARK 3 L33: 0.8262 L12: 0.5766 REMARK 3 L13: 0.5720 L23: 0.3253 REMARK 3 S TENSOR REMARK 3 S11: -0.0726 S12: -0.0778 S13: 0.0636 REMARK 3 S21: -0.0815 S22: -0.0033 S23: 0.0158 REMARK 3 S31: 0.0925 S32: -0.0997 S33: 0.0759 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 10 REMARK 3 RESIDUE RANGE : F 80 F 170 REMARK 3 ORIGIN FOR THE GROUP (A): 0.2963 -23.6331 50.9433 REMARK 3 T TENSOR REMARK 3 T11: 0.1425 T22: 0.2350 REMARK 3 T33: 0.1365 T12: 0.0122 REMARK 3 T13: 0.0091 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 0.6164 L22: 0.4281 REMARK 3 L33: 0.3246 L12: -0.4635 REMARK 3 L13: -0.2241 L23: 0.1243 REMARK 3 S TENSOR REMARK 3 S11: -0.0358 S12: -0.1641 S13: 0.0291 REMARK 3 S21: -0.0615 S22: 0.0605 S23: -0.0468 REMARK 3 S31: 0.0051 S32: 0.0893 S33: -0.0246 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 171 F 244 REMARK 3 ORIGIN FOR THE GROUP (A): -1.8602 -36.5355 32.6874 REMARK 3 T TENSOR REMARK 3 T11: 0.1678 T22: 0.1843 REMARK 3 T33: 0.1684 T12: 0.0110 REMARK 3 T13: -0.0140 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.2250 L22: 0.2931 REMARK 3 L33: 0.2197 L12: -0.0529 REMARK 3 L13: 0.0728 L23: 0.2142 REMARK 3 S TENSOR REMARK 3 S11: 0.0083 S12: -0.0087 S13: -0.0733 REMARK 3 S21: -0.0677 S22: -0.0166 S23: 0.0729 REMARK 3 S31: -0.0580 S32: 0.0157 S33: 0.0083 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 245 F 347 REMARK 3 ORIGIN FOR THE GROUP (A): -13.5262 -8.0409 20.2971 REMARK 3 T TENSOR REMARK 3 T11: 0.1853 T22: 0.1376 REMARK 3 T33: 0.1125 T12: -0.0068 REMARK 3 T13: 0.0054 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.1846 L22: 0.5326 REMARK 3 L33: 0.9948 L12: 0.3854 REMARK 3 L13: 0.3245 L23: -0.4555 REMARK 3 S TENSOR REMARK 3 S11: -0.0257 S12: 0.0369 S13: 0.0198 REMARK 3 S21: -0.0790 S22: 0.0157 S23: 0.0132 REMARK 3 S31: 0.0674 S32: 0.0116 S33: 0.0099 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 838 G 849 REMARK 3 RESIDUE RANGE : H 866 H 873 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7964 -22.3870 26.3061 REMARK 3 T TENSOR REMARK 3 T11: 0.2078 T22: 0.1335 REMARK 3 T33: 0.1728 T12: 0.0012 REMARK 3 T13: -0.0280 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.6216 L22: 0.0360 REMARK 3 L33: 0.0176 L12: -0.1451 REMARK 3 L13: -0.0371 L23: 0.0121 REMARK 3 S TENSOR REMARK 3 S11: 0.0624 S12: -0.0232 S13: 0.0866 REMARK 3 S21: -0.0013 S22: 0.0030 S23: -0.0273 REMARK 3 S31: 0.0203 S32: 0.0036 S33: -0.0654 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JUM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-19. REMARK 100 THE DEPOSITION ID IS D_1300011771. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89850 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 105.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6JUL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 2KMME 12%, NACL 0.2 MM, BIS TRIS REMARK 280 PROPANE PH 6.0., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.01000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.80500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.48000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 105.80500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.01000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.48000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, H, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DT H 856 REMARK 465 DC H 857 REMARK 465 DT H 858 REMARK 465 DG H 859 REMARK 465 DG H 860 REMARK 465 DG H 861 REMARK 465 DG H 862 REMARK 465 DT H 863 REMARK 465 DC H 864 REMARK 465 DC H 865 REMARK 465 DT G 837 REMARK 465 DG G 850 REMARK 465 DA G 851 REMARK 465 DC G 852 REMARK 465 DC G 853 REMARK 465 DC G 854 REMARK 465 DT C 856 REMARK 465 DC C 857 REMARK 465 DT C 858 REMARK 465 DG C 859 REMARK 465 DG C 860 REMARK 465 DG C 861 REMARK 465 DG C 862 REMARK 465 DT C 863 REMARK 465 DT B 837 REMARK 465 DA B 851 REMARK 465 DC B 852 REMARK 465 DC B 853 REMARK 465 DC B 854 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 675 O HOH A 722 1.99 REMARK 500 O HOH A 789 O HOH A 790 2.06 REMARK 500 O HOH A 502 O HOH A 663 2.07 REMARK 500 O6 DG G 842 O HOH G 901 2.09 REMARK 500 N MET A 1 O HOH A 501 2.12 REMARK 500 O HOH A 502 O HOH A 646 2.12 REMARK 500 O HOH F 701 O HOH F 751 2.13 REMARK 500 O2 DC C 871 O HOH C 901 2.14 REMARK 500 O HOH F 577 O HOH F 773 2.14 REMARK 500 OE1 GLU F 40 O HOH F 501 2.14 REMARK 500 O HOH A 675 O HOH A 734 2.16 REMARK 500 OG SER A 16 O HOH A 502 2.16 REMARK 500 O HOH A 587 O HOH A 678 2.16 REMARK 500 NH1 ARG A 68 O HOH A 503 2.17 REMARK 500 O HOH A 702 O HOH A 758 2.18 REMARK 500 O3' DG G 849 O HOH G 902 2.18 REMARK 500 O HOH A 607 O HOH A 764 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 51 CD GLU A 51 OE1 0.097 REMARK 500 TRP A 106 CB TRP A 106 CG -0.143 REMARK 500 GLU A 126 C GLU A 126 O -0.137 REMARK 500 ASP A 234 C ASP A 234 O -0.151 REMARK 500 GLU A 236 CD GLU A 236 OE1 -0.085 REMARK 500 GLU A 236 C GLU A 236 O -0.141 REMARK 500 SER A 238 C SER A 238 O -0.173 REMARK 500 GLU F 108 CD GLU F 108 OE1 -0.101 REMARK 500 DA H 870 O3' DC H 871 P -0.093 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 6 CB - CG - CD2 ANGL. DEV. = 18.9 DEGREES REMARK 500 ASP A 9 CB - CG - OD1 ANGL. DEV. = -9.2 DEGREES REMARK 500 ASP A 9 CB - CG - OD2 ANGL. DEV. = 10.4 DEGREES REMARK 500 LEU A 14 CB - CG - CD1 ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG A 20 CG - CD - NE ANGL. DEV. = -12.6 DEGREES REMARK 500 ARG A 20 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 26 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASP A 37 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP A 37 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG A 68 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 69 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 95 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 TRP A 106 N - CA - CB ANGL. DEV. = -12.4 DEGREES REMARK 500 ASP A 120 CB - CG - OD1 ANGL. DEV. = 8.0 DEGREES REMARK 500 ASP A 120 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG A 127 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 129 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 245 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 245 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 287 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 339 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ASP F 11 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP F 11 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 LEU F 14 CB - CG - CD1 ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG F 26 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG F 26 NE - CZ - NH2 ANGL. DEV. = -8.8 DEGREES REMARK 500 ASP F 37 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG F 53 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP F 114 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG F 129 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG F 129 NE - CZ - NH2 ANGL. DEV. = -7.4 DEGREES REMARK 500 ASP F 146 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG F 287 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG F 304 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 DG H 868 C4' - C3' - O3' ANGL. DEV. = 14.6 DEGREES REMARK 500 DA H 870 O5' - P - OP2 ANGL. DEV. = -6.8 DEGREES REMARK 500 DC G 838 O5' - P - OP2 ANGL. DEV. = -8.0 DEGREES REMARK 500 DC G 838 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DG G 843 OP1 - P - OP2 ANGL. DEV. = 9.7 DEGREES REMARK 500 DG C 868 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC C 871 C1' - O4' - C4' ANGL. DEV. = -7.4 DEGREES REMARK 500 DC C 872 O5' - P - OP2 ANGL. DEV. = -5.9 DEGREES REMARK 500 DG B 841 O5' - P - OP2 ANGL. DEV. = -6.8 DEGREES REMARK 500 DG B 842 O5' - P - OP2 ANGL. DEV. = -8.8 DEGREES REMARK 500 DG B 843 O5' - C5' - C4' ANGL. DEV. = -7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 12 59.45 30.05 REMARK 500 SER A 145 -156.23 -153.15 REMARK 500 GLN F 12 56.40 33.90 REMARK 500 PHE F 13 -70.29 -44.29 REMARK 500 SER F 145 -155.49 -154.50 REMARK 500 ASP F 345 32.25 -86.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 794 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A 795 DISTANCE = 6.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD1 REMARK 620 2 LEU A 10 O 80.6 REMARK 620 3 ASP A 107 OD2 97.5 89.3 REMARK 620 4 0KX A 401 O2G 82.3 99.7 170.9 REMARK 620 5 0KX A 401 O2B 164.2 89.5 94.6 87.3 REMARK 620 6 0KX A 401 O1A 107.0 171.1 85.2 86.2 84.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD2 REMARK 620 2 ASP A 107 OD1 92.0 REMARK 620 3 GLU A 108 OE1 89.8 103.6 REMARK 620 4 0KX A 401 O1A 95.3 85.9 169.1 REMARK 620 5 HOH A 609 O 93.6 167.2 87.9 82.2 REMARK 620 6 DC C 873 O3' 173.2 83.5 86.3 89.4 91.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 9 OD1 REMARK 620 2 LEU F 10 O 84.2 REMARK 620 3 ASP F 107 OD2 99.7 92.5 REMARK 620 4 0KX F 401 O1G 82.9 98.8 168.6 REMARK 620 5 0KX F 401 O1B 167.7 90.5 91.6 86.9 REMARK 620 6 0KX F 401 O2A 100.5 174.9 84.7 84.0 85.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG F 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 9 OD2 REMARK 620 2 ASP F 107 OD1 96.4 REMARK 620 3 GLU F 108 OE1 85.8 97.7 REMARK 620 4 0KX F 401 O2A 100.3 93.8 166.3 REMARK 620 5 HOH F 555 O 87.5 170.7 91.0 77.2 REMARK 620 6 DC H 873 O3' 169.1 80.9 84.1 90.5 96.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 0KX F 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG F 403 DBREF 6JUM A 1 347 UNP A0QR77 A0QR77_MYCS2 1 347 DBREF 6JUM F 1 347 UNP A0QR77 A0QR77_MYCS2 1 347 DBREF 6JUM H 856 873 PDB 6JUM 6JUM 856 873 DBREF 6JUM G 837 854 PDB 6JUM 6JUM 837 854 DBREF 6JUM C 856 873 PDB 6JUM 6JUM 856 873 DBREF 6JUM B 837 854 PDB 6JUM 6JUM 837 854 SEQADV 6JUM THR A 47 UNP A0QR77 CYS 47 ENGINEERED MUTATION SEQADV 6JUM THR F 47 UNP A0QR77 CYS 47 ENGINEERED MUTATION SEQRES 1 A 347 MET THR LYS TRP VAL LEU HIS VAL ASP LEU ASP GLN PHE SEQRES 2 A 347 LEU ALA SER VAL GLU LEU ARG ARG ARG PRO ASP LEU ARG SEQRES 3 A 347 GLY GLN PRO VAL ILE VAL GLY GLY SER GLY ASP PRO SER SEQRES 4 A 347 GLU PRO ARG LYS VAL VAL THR THR ALA SER TYR GLU ALA SEQRES 5 A 347 ARG GLU PHE GLY VAL HIS ALA GLY MET PRO LEU ARG ALA SEQRES 6 A 347 ALA ALA ARG ARG CYS PRO ASP ALA THR PHE LEU PRO SER SEQRES 7 A 347 ASP PRO ALA ALA TYR ASP GLU ALA SER GLU GLN VAL MET SEQRES 8 A 347 GLY LEU LEU ARG ASP LEU GLY HIS PRO LEU GLU VAL TRP SEQRES 9 A 347 GLY TRP ASP GLU ALA TYR LEU GLY ALA ASP LEU PRO ASP SEQRES 10 A 347 GLU SER ASP PRO VAL GLU VAL ALA GLU ARG ILE ARG THR SEQRES 11 A 347 VAL VAL ALA ALA GLU THR GLY LEU SER CYS SER VAL GLY SEQRES 12 A 347 ILE SER ASP ASN LYS GLN ARG ALA LYS VAL ALA THR GLY SEQRES 13 A 347 PHE ALA LYS PRO ALA GLY ILE TYR VAL LEU THR GLU ALA SEQRES 14 A 347 ASN TRP MET THR VAL MET GLY ASP ARG PRO PRO ASP ALA SEQRES 15 A 347 LEU TRP GLY VAL GLY PRO LYS THR THR LYS LYS LEU ALA SEQRES 16 A 347 ALA MET GLY ILE THR THR VAL ALA ASP LEU ALA VAL THR SEQRES 17 A 347 ASP PRO SER VAL LEU THR THR ALA PHE GLY PRO SER THR SEQRES 18 A 347 GLY LEU TRP LEU LEU LEU LEU ALA LYS GLY GLY GLY ASP SEQRES 19 A 347 THR GLU VAL SER SER GLU PRO TRP VAL PRO ARG SER ARG SEQRES 20 A 347 SER HIS VAL VAL THR PHE PRO GLN ASP LEU THR GLU ARG SEQRES 21 A 347 ARG GLU MET ASP SER ALA VAL ARG ASP LEU ALA LEU GLN SEQRES 22 A 347 THR LEU ALA GLU ILE VAL GLU GLN GLY ARG ILE VAL THR SEQRES 23 A 347 ARG VAL ALA VAL THR VAL ARG THR SER THR PHE TYR THR SEQRES 24 A 347 ARG THR LYS ILE ARG LYS LEU PRO ALA PRO SER THR ASP SEQRES 25 A 347 ALA GLY GLN ILE VAL ASP THR ALA LEU ALA VAL LEU ASP SEQRES 26 A 347 GLN PHE GLU LEU ASP ARG PRO VAL ARG LEU LEU GLY VAL SEQRES 27 A 347 ARG LEU GLU LEU ALA MET ASP ASP VAL SEQRES 1 F 347 MET THR LYS TRP VAL LEU HIS VAL ASP LEU ASP GLN PHE SEQRES 2 F 347 LEU ALA SER VAL GLU LEU ARG ARG ARG PRO ASP LEU ARG SEQRES 3 F 347 GLY GLN PRO VAL ILE VAL GLY GLY SER GLY ASP PRO SER SEQRES 4 F 347 GLU PRO ARG LYS VAL VAL THR THR ALA SER TYR GLU ALA SEQRES 5 F 347 ARG GLU PHE GLY VAL HIS ALA GLY MET PRO LEU ARG ALA SEQRES 6 F 347 ALA ALA ARG ARG CYS PRO ASP ALA THR PHE LEU PRO SER SEQRES 7 F 347 ASP PRO ALA ALA TYR ASP GLU ALA SER GLU GLN VAL MET SEQRES 8 F 347 GLY LEU LEU ARG ASP LEU GLY HIS PRO LEU GLU VAL TRP SEQRES 9 F 347 GLY TRP ASP GLU ALA TYR LEU GLY ALA ASP LEU PRO ASP SEQRES 10 F 347 GLU SER ASP PRO VAL GLU VAL ALA GLU ARG ILE ARG THR SEQRES 11 F 347 VAL VAL ALA ALA GLU THR GLY LEU SER CYS SER VAL GLY SEQRES 12 F 347 ILE SER ASP ASN LYS GLN ARG ALA LYS VAL ALA THR GLY SEQRES 13 F 347 PHE ALA LYS PRO ALA GLY ILE TYR VAL LEU THR GLU ALA SEQRES 14 F 347 ASN TRP MET THR VAL MET GLY ASP ARG PRO PRO ASP ALA SEQRES 15 F 347 LEU TRP GLY VAL GLY PRO LYS THR THR LYS LYS LEU ALA SEQRES 16 F 347 ALA MET GLY ILE THR THR VAL ALA ASP LEU ALA VAL THR SEQRES 17 F 347 ASP PRO SER VAL LEU THR THR ALA PHE GLY PRO SER THR SEQRES 18 F 347 GLY LEU TRP LEU LEU LEU LEU ALA LYS GLY GLY GLY ASP SEQRES 19 F 347 THR GLU VAL SER SER GLU PRO TRP VAL PRO ARG SER ARG SEQRES 20 F 347 SER HIS VAL VAL THR PHE PRO GLN ASP LEU THR GLU ARG SEQRES 21 F 347 ARG GLU MET ASP SER ALA VAL ARG ASP LEU ALA LEU GLN SEQRES 22 F 347 THR LEU ALA GLU ILE VAL GLU GLN GLY ARG ILE VAL THR SEQRES 23 F 347 ARG VAL ALA VAL THR VAL ARG THR SER THR PHE TYR THR SEQRES 24 F 347 ARG THR LYS ILE ARG LYS LEU PRO ALA PRO SER THR ASP SEQRES 25 F 347 ALA GLY GLN ILE VAL ASP THR ALA LEU ALA VAL LEU ASP SEQRES 26 F 347 GLN PHE GLU LEU ASP ARG PRO VAL ARG LEU LEU GLY VAL SEQRES 27 F 347 ARG LEU GLU LEU ALA MET ASP ASP VAL SEQRES 1 H 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 H 18 DG DA DC DC DC SEQRES 1 G 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 G 18 DG DA DC DC DC SEQRES 1 C 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 C 18 DG DA DC DC DC SEQRES 1 B 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 B 18 DG DA DC DC DC HET 0KX A 401 28 HET MG A 402 1 HET MG A 403 1 HET 0KX F 401 28 HET MG F 402 1 HET MG F 403 1 HETNAM 0KX 2'-DEOXY-5'-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 0KX PHOSPHORYL]AMINO}PHOSPHORYL]CYTIDINE HETNAM MG MAGNESIUM ION FORMUL 7 0KX 2(C9 H17 N4 O12 P3) FORMUL 8 MG 4(MG 2+) FORMUL 13 HOH *694(H2 O) HELIX 1 AA1 GLN A 12 ARG A 22 1 11 HELIX 2 AA2 PRO A 23 ARG A 26 5 4 HELIX 3 AA3 SER A 49 GLU A 54 1 6 HELIX 4 AA4 PRO A 62 CYS A 70 1 9 HELIX 5 AA5 ASP A 79 ASP A 96 1 18 HELIX 6 AA6 ASP A 120 GLY A 137 1 18 HELIX 7 AA7 ASN A 147 LYS A 159 1 13 HELIX 8 AA8 ASN A 170 GLY A 176 1 7 HELIX 9 AA9 PRO A 179 LEU A 183 5 5 HELIX 10 AB1 GLY A 187 ALA A 196 1 10 HELIX 11 AB2 THR A 201 VAL A 207 1 7 HELIX 12 AB3 ASP A 209 GLY A 218 1 10 HELIX 13 AB4 SER A 220 LYS A 230 1 11 HELIX 14 AB5 GLU A 259 GLN A 281 1 23 HELIX 15 AB6 ASP A 312 PHE A 327 1 16 HELIX 16 AB7 GLN F 12 ARG F 22 1 11 HELIX 17 AB8 PRO F 23 ARG F 26 5 4 HELIX 18 AB9 SER F 49 GLU F 54 1 6 HELIX 19 AC1 PRO F 62 CYS F 70 1 9 HELIX 20 AC2 ASP F 79 ASP F 96 1 18 HELIX 21 AC3 PRO F 121 GLY F 137 1 17 HELIX 22 AC4 ASN F 147 LYS F 159 1 13 HELIX 23 AC5 ASN F 170 GLY F 176 1 7 HELIX 24 AC6 PRO F 179 LEU F 183 5 5 HELIX 25 AC7 GLY F 187 MET F 197 1 11 HELIX 26 AC8 THR F 201 VAL F 207 1 7 HELIX 27 AC9 ASP F 209 GLY F 218 1 10 HELIX 28 AD1 SER F 220 LYS F 230 1 11 HELIX 29 AD2 GLU F 259 GLN F 281 1 23 HELIX 30 AD3 ASP F 312 ASP F 325 1 14 SHEET 1 AA1 5 LEU A 101 TRP A 104 0 SHEET 2 AA1 5 GLU A 108 LEU A 115 -1 O GLU A 108 N TRP A 104 SHEET 3 AA1 5 THR A 2 LEU A 10 -1 N VAL A 8 O ALA A 109 SHEET 4 AA1 5 CYS A 140 SER A 145 -1 O GLY A 143 N HIS A 7 SHEET 5 AA1 5 ILE A 163 VAL A 165 1 O TYR A 164 N ILE A 144 SHEET 1 AA2 3 THR A 47 ALA A 48 0 SHEET 2 AA2 3 VAL A 30 VAL A 32 -1 N VAL A 32 O THR A 47 SHEET 3 AA2 3 THR A 74 LEU A 76 1 O THR A 74 N ILE A 31 SHEET 1 AA3 4 SER A 246 LEU A 257 0 SHEET 2 AA3 4 VAL A 333 LEU A 342 -1 O LEU A 340 N ARG A 247 SHEET 3 AA3 4 VAL A 285 THR A 294 -1 N ALA A 289 O ARG A 339 SHEET 4 AA3 4 THR A 299 SER A 310 -1 O ARG A 300 N VAL A 292 SHEET 1 AA4 5 LEU F 101 GLY F 105 0 SHEET 2 AA4 5 GLU F 108 LEU F 115 -1 O TYR F 110 N GLU F 102 SHEET 3 AA4 5 THR F 2 LEU F 10 -1 N VAL F 8 O ALA F 109 SHEET 4 AA4 5 CYS F 140 SER F 145 -1 O SER F 145 N VAL F 5 SHEET 5 AA4 5 ILE F 163 VAL F 165 1 O TYR F 164 N ILE F 144 SHEET 1 AA5 3 THR F 47 ALA F 48 0 SHEET 2 AA5 3 VAL F 30 VAL F 32 -1 N VAL F 32 O THR F 47 SHEET 3 AA5 3 THR F 74 LEU F 76 1 O LEU F 76 N ILE F 31 SHEET 1 AA6 4 SER F 246 LEU F 257 0 SHEET 2 AA6 4 VAL F 333 LEU F 342 -1 O LEU F 340 N ARG F 247 SHEET 3 AA6 4 VAL F 285 THR F 294 -1 N ALA F 289 O ARG F 339 SHEET 4 AA6 4 THR F 299 SER F 310 -1 O ARG F 300 N VAL F 292 LINK OD1 ASP A 9 MG MG A 402 1555 1555 2.27 LINK OD2 ASP A 9 MG MG A 403 1555 1555 2.14 LINK O LEU A 10 MG MG A 402 1555 1555 2.33 LINK OD2 ASP A 107 MG MG A 402 1555 1555 2.14 LINK OD1 ASP A 107 MG MG A 403 1555 1555 2.22 LINK OE1 GLU A 108 MG MG A 403 1555 1555 2.30 LINK O2G 0KX A 401 MG MG A 402 1555 1555 2.22 LINK O2B 0KX A 401 MG MG A 402 1555 1555 2.30 LINK O1A 0KX A 401 MG MG A 402 1555 1555 2.23 LINK O1A 0KX A 401 MG MG A 403 1555 1555 2.28 LINK MG MG A 403 O HOH A 609 1555 1555 2.41 LINK MG MG A 403 O3' DC C 873 1555 1555 2.32 LINK OD1 ASP F 9 MG MG F 402 1555 1555 2.20 LINK OD2 ASP F 9 MG MG F 403 1555 1555 2.23 LINK O LEU F 10 MG MG F 402 1555 1555 2.28 LINK OD2 ASP F 107 MG MG F 402 1555 1555 2.09 LINK OD1 ASP F 107 MG MG F 403 1555 1555 2.16 LINK OE1 GLU F 108 MG MG F 403 1555 1555 2.34 LINK O1G 0KX F 401 MG MG F 402 1555 1555 2.14 LINK O1B 0KX F 401 MG MG F 402 1555 1555 2.26 LINK O2A 0KX F 401 MG MG F 402 1555 1555 2.34 LINK O2A 0KX F 401 MG MG F 403 1555 1555 2.27 LINK MG MG F 403 O HOH F 555 1555 1555 2.34 LINK MG MG F 403 O3' DC H 873 1555 1555 2.24 CISPEP 1 LYS A 159 PRO A 160 0 -5.57 CISPEP 2 LYS F 159 PRO F 160 0 -9.91 SITE 1 AC1 25 ASP A 9 LEU A 10 ASP A 11 GLN A 12 SITE 2 AC1 25 PHE A 13 LEU A 14 THR A 46 THR A 47 SITE 3 AC1 25 TYR A 50 ARG A 53 ALA A 59 ASP A 107 SITE 4 AC1 25 LYS A 159 MG A 402 MG A 403 HOH A 542 SITE 5 AC1 25 HOH A 547 HOH A 609 HOH A 619 HOH A 642 SITE 6 AC1 25 HOH A 695 HOH A 706 DG B 840 DG B 841 SITE 7 AC1 25 DC C 873 SITE 1 AC2 5 ASP A 9 LEU A 10 ASP A 107 0KX A 401 SITE 2 AC2 5 MG A 403 SITE 1 AC3 7 ASP A 9 ASP A 107 GLU A 108 0KX A 401 SITE 2 AC3 7 MG A 402 HOH A 609 DC C 873 SITE 1 AC4 25 ASP F 9 LEU F 10 ASP F 11 GLN F 12 SITE 2 AC4 25 PHE F 13 THR F 46 THR F 47 TYR F 50 SITE 3 AC4 25 ARG F 53 TRP F 106 ASP F 107 LYS F 159 SITE 4 AC4 25 MG F 402 MG F 403 HOH F 527 HOH F 544 SITE 5 AC4 25 HOH F 555 HOH F 588 HOH F 610 HOH F 621 SITE 6 AC4 25 HOH F 637 HOH F 669 HOH F 687 DG G 840 SITE 7 AC4 25 DC H 873 SITE 1 AC5 5 ASP F 9 LEU F 10 ASP F 107 0KX F 401 SITE 2 AC5 5 MG F 403 SITE 1 AC6 7 ASP F 9 ASP F 107 GLU F 108 0KX F 401 SITE 2 AC6 7 MG F 402 HOH F 555 DC H 873 CRYST1 54.020 80.960 211.610 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018512 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012352 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004726 0.00000