HEADER REPLICATION/DNA 15-APR-19 6JUS TITLE MSDPO4-DNA COMPLEX 6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A, F; COMPND 4 SYNONYM: POL IV; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*TP*CP*TP*GP*GP*GP*GP*TP*CP*CP*TP*AP*G)-3'); COMPND 9 CHAIN: B, C, G, H; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: DNA TEMPLATE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 VARIANT: ATCC 700084 / MC(2)155; SOURCE 7 GENE: DINB, MSMEG_1014, MSMEG_2294; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 13 ORGANISM_TAXID: 1772 KEYWDS DNA POLYMERASE, REPLICATION, REPLICATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.T.NAIR,M.K.JOHNSON REVDAT 2 22-NOV-23 6JUS 1 REMARK LINK REVDAT 1 19-FEB-20 6JUS 0 JRNL AUTH M.K.JOHNSON,J.KOTTUR,D.T.NAIR JRNL TITL A POLAR FILTER IN DNA POLYMERASES PREVENTS RIBONUCLEOTIDE JRNL TITL 2 INCORPORATION. JRNL REF NUCLEIC ACIDS RES. V. 47 10693 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 31544946 JRNL DOI 10.1093/NAR/GKZ792 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 30229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1618 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2097 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5290 REMARK 3 NUCLEIC ACID ATOMS : 877 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.30000 REMARK 3 B22 (A**2) : -3.09000 REMARK 3 B33 (A**2) : 3.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.587 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.296 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.249 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.074 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6413 ; 0.020 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8920 ; 2.233 ; 1.852 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 689 ; 7.499 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 219 ;37.034 ;22.877 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 875 ;18.967 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 54 ;16.998 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 995 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4522 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2765 ; 2.706 ; 3.462 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3451 ; 4.281 ; 5.187 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3648 ; 3.672 ; 4.400 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9892 ; 8.332 ;51.494 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 79 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5801 -21.5322 23.2653 REMARK 3 T TENSOR REMARK 3 T11: 0.0815 T22: 0.1746 REMARK 3 T33: 0.0936 T12: 0.0210 REMARK 3 T13: -0.0445 T23: -0.0726 REMARK 3 L TENSOR REMARK 3 L11: 3.6278 L22: 2.7125 REMARK 3 L33: 1.5168 L12: 0.3527 REMARK 3 L13: -0.0104 L23: 1.5342 REMARK 3 S TENSOR REMARK 3 S11: -0.0430 S12: -0.0927 S13: 0.0370 REMARK 3 S21: -0.1557 S22: -0.0031 S23: 0.0648 REMARK 3 S31: -0.1078 S32: 0.2662 S33: 0.0462 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 10 REMARK 3 RESIDUE RANGE : A 80 A 170 REMARK 3 ORIGIN FOR THE GROUP (A): -12.0915 -21.6248 28.2378 REMARK 3 T TENSOR REMARK 3 T11: 0.1155 T22: 0.1711 REMARK 3 T33: 0.2230 T12: 0.0253 REMARK 3 T13: -0.0258 T23: -0.0552 REMARK 3 L TENSOR REMARK 3 L11: 2.3347 L22: 1.8341 REMARK 3 L33: 2.6956 L12: -1.2668 REMARK 3 L13: -0.7426 L23: 1.8805 REMARK 3 S TENSOR REMARK 3 S11: 0.1085 S12: 0.0963 S13: -0.4121 REMARK 3 S21: 0.1231 S22: 0.0149 S23: 0.0370 REMARK 3 S31: 0.0493 S32: -0.1866 S33: -0.1234 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 171 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): -10.4305 0.6116 29.9769 REMARK 3 T TENSOR REMARK 3 T11: 0.1673 T22: 0.1762 REMARK 3 T33: 0.0626 T12: -0.0266 REMARK 3 T13: -0.0155 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 0.6631 L22: 1.0891 REMARK 3 L33: 0.9940 L12: 0.3121 REMARK 3 L13: -0.1204 L23: 0.3336 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: -0.0248 S13: -0.0145 REMARK 3 S21: -0.0111 S22: 0.1014 S23: 0.0914 REMARK 3 S31: -0.1813 S32: 0.0920 S33: -0.0416 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 347 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3157 -4.1401 0.0851 REMARK 3 T TENSOR REMARK 3 T11: 0.2283 T22: 0.1133 REMARK 3 T33: 0.0246 T12: -0.0835 REMARK 3 T13: 0.0000 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.0938 L22: 2.7617 REMARK 3 L33: 3.4085 L12: 0.2988 REMARK 3 L13: 1.3834 L23: -1.1511 REMARK 3 S TENSOR REMARK 3 S11: 0.0153 S12: 0.1808 S13: 0.0320 REMARK 3 S21: 0.1490 S22: -0.1996 S23: -0.2315 REMARK 3 S31: -0.2503 S32: 0.2537 S33: 0.1843 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 837 B 849 REMARK 3 RESIDUE RANGE : C 865 C 873 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4196 -1.3747 14.7406 REMARK 3 T TENSOR REMARK 3 T11: 0.4373 T22: 0.2118 REMARK 3 T33: 0.0536 T12: -0.0524 REMARK 3 T13: -0.0210 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 3.9248 L22: 2.0496 REMARK 3 L33: 0.4688 L12: 2.7256 REMARK 3 L13: -0.7915 L23: -0.3529 REMARK 3 S TENSOR REMARK 3 S11: 0.0272 S12: -0.1172 S13: 0.1140 REMARK 3 S21: -0.0005 S22: 0.0134 S23: 0.1126 REMARK 3 S31: -0.2059 S32: 0.2338 S33: -0.0406 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 11 F 79 REMARK 3 ORIGIN FOR THE GROUP (A): 2.1335 21.2272 46.3732 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.2153 REMARK 3 T33: 0.1329 T12: -0.0401 REMARK 3 T13: -0.0099 T23: -0.1029 REMARK 3 L TENSOR REMARK 3 L11: 2.5485 L22: 2.1713 REMARK 3 L33: 2.0891 L12: 2.1806 REMARK 3 L13: 1.0885 L23: 1.5565 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: -0.2069 S13: 0.1346 REMARK 3 S21: -0.0834 S22: -0.1094 S23: 0.0936 REMARK 3 S31: 0.0227 S32: -0.1984 S33: 0.1367 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 10 REMARK 3 RESIDUE RANGE : F 80 F 170 REMARK 3 ORIGIN FOR THE GROUP (A): 26.7359 16.3194 50.0037 REMARK 3 T TENSOR REMARK 3 T11: 0.0869 T22: 0.1856 REMARK 3 T33: 0.0421 T12: -0.0022 REMARK 3 T13: 0.0339 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 3.1476 L22: 3.2987 REMARK 3 L33: 0.9340 L12: -1.7894 REMARK 3 L13: -0.5208 L23: 0.4420 REMARK 3 S TENSOR REMARK 3 S11: -0.0670 S12: -0.2635 S13: 0.0813 REMARK 3 S21: -0.0474 S22: 0.0505 S23: -0.0229 REMARK 3 S31: 0.0156 S32: 0.0771 S33: 0.0164 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 171 F 244 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0943 3.7066 31.9867 REMARK 3 T TENSOR REMARK 3 T11: 0.1555 T22: 0.1372 REMARK 3 T33: 0.2403 T12: -0.0089 REMARK 3 T13: -0.0668 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 1.4521 L22: 2.4079 REMARK 3 L33: 0.8588 L12: 0.0893 REMARK 3 L13: -0.9424 L23: 0.4621 REMARK 3 S TENSOR REMARK 3 S11: -0.1960 S12: -0.0289 S13: -0.2265 REMARK 3 S21: -0.1664 S22: -0.1583 S23: 0.4914 REMARK 3 S31: 0.0658 S32: 0.0267 S33: 0.3544 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 245 F 347 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2061 31.9949 20.2107 REMARK 3 T TENSOR REMARK 3 T11: 0.2457 T22: 0.0788 REMARK 3 T33: 0.0548 T12: 0.0348 REMARK 3 T13: -0.0638 T23: -0.0233 REMARK 3 L TENSOR REMARK 3 L11: 2.6366 L22: 1.8895 REMARK 3 L33: 1.8271 L12: 1.7353 REMARK 3 L13: -0.3052 L23: -0.8618 REMARK 3 S TENSOR REMARK 3 S11: 0.1276 S12: 0.0017 S13: -0.0212 REMARK 3 S21: -0.2128 S22: -0.0024 S23: -0.0089 REMARK 3 S31: 0.1782 S32: -0.0717 S33: -0.1252 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 838 G 849 REMARK 3 RESIDUE RANGE : H 865 H 873 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3037 17.9167 25.0691 REMARK 3 T TENSOR REMARK 3 T11: 0.3253 T22: 0.0896 REMARK 3 T33: 0.1394 T12: -0.0237 REMARK 3 T13: -0.1100 T23: -0.0495 REMARK 3 L TENSOR REMARK 3 L11: 2.7405 L22: 0.8105 REMARK 3 L33: 1.1421 L12: -1.0311 REMARK 3 L13: 1.4717 L23: -0.2224 REMARK 3 S TENSOR REMARK 3 S11: 0.1864 S12: 0.2073 S13: -0.0749 REMARK 3 S21: -0.1976 S22: -0.0088 S23: 0.0029 REMARK 3 S31: 0.1575 S32: 0.1925 S33: -0.1775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JUS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-19. REMARK 100 THE DEPOSITION ID IS D_1300011785. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31909 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 44.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.55200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6JUL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 2KMME 12%, BIS TRIS PROPANE PH REMARK 280 6.0, NACL 0.2 MM, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.86500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.36000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.17000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 104.36000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.86500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.17000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 348 REMARK 465 ARG A 349 REMARK 465 PRO A 350 REMARK 465 ALA A 351 REMARK 465 VAL A 352 REMARK 465 THR A 353 REMARK 465 ALA A 354 REMARK 465 GLY A 355 REMARK 465 THR A 356 REMARK 465 DG B 850 REMARK 465 DA B 851 REMARK 465 DC B 852 REMARK 465 DC B 853 REMARK 465 DC B 854 REMARK 465 DT C 856 REMARK 465 DC C 857 REMARK 465 DT C 858 REMARK 465 DG C 859 REMARK 465 DG C 860 REMARK 465 DG C 861 REMARK 465 DG C 862 REMARK 465 DT C 863 REMARK 465 DC C 864 REMARK 465 PRO F 348 REMARK 465 ARG F 349 REMARK 465 PRO F 350 REMARK 465 ALA F 351 REMARK 465 VAL F 352 REMARK 465 THR F 353 REMARK 465 ALA F 354 REMARK 465 GLY F 355 REMARK 465 THR F 356 REMARK 465 DT G 837 REMARK 465 DG G 850 REMARK 465 DA G 851 REMARK 465 DC G 852 REMARK 465 DC G 853 REMARK 465 DC G 854 REMARK 465 DT H 856 REMARK 465 DC H 857 REMARK 465 DT H 858 REMARK 465 DG H 859 REMARK 465 DG H 860 REMARK 465 DG H 861 REMARK 465 DG H 862 REMARK 465 DT H 863 REMARK 465 DC H 864 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2B 2TM A 401 MN MN A 403 1.44 REMARK 500 OD1 ASP A 9 NZ LYS A 159 1.80 REMARK 500 NH2 ARG A 334 OP1 DG B 840 1.88 REMARK 500 CB ARG F 331 O HOH F 537 2.00 REMARK 500 OP2 DG B 840 O HOH B 901 2.01 REMARK 500 OP1 DA C 867 O HOH C 901 2.03 REMARK 500 O THR A 258 OD2 ASP A 330 2.04 REMARK 500 OP1 DC B 845 O HOH B 902 2.08 REMARK 500 OP2 DC G 846 O HOH G 901 2.10 REMARK 500 OG SER A 238 O HOH A 501 2.14 REMARK 500 OD2 ASP F 9 O HOH F 501 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 328 N GLU A 328 CA -0.132 REMARK 500 GLU A 328 CA GLU A 328 C -0.162 REMARK 500 GLU A 328 C GLU A 328 O -0.131 REMARK 500 ARG A 331 C PRO A 332 N -0.132 REMARK 500 PRO A 332 N PRO A 332 CA -0.114 REMARK 500 DG B 842 O3' DG B 843 P -0.074 REMARK 500 GLU F 328 CA GLU F 328 CB -0.173 REMARK 500 GLU F 328 CG GLU F 328 CD -0.160 REMARK 500 GLU F 328 CD GLU F 328 OE1 -0.103 REMARK 500 GLU F 328 CD GLU F 328 OE2 -0.098 REMARK 500 VAL F 333 C VAL F 333 O -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 26 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 64 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ASP A 79 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 GLU A 108 N - CA - CB ANGL. DEV. = -14.2 DEGREES REMARK 500 GLU A 108 N - CA - C ANGL. DEV. = 18.2 DEGREES REMARK 500 ARG A 129 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 245 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 247 NE - CZ - NH1 ANGL. DEV. = -4.3 DEGREES REMARK 500 LEU A 329 CB - CG - CD1 ANGL. DEV. = -10.8 DEGREES REMARK 500 PRO A 332 N - CA - C ANGL. DEV. = -18.1 DEGREES REMARK 500 DG B 843 O5' - C5' - C4' ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG F 26 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 LEU F 76 CB - CG - CD1 ANGL. DEV. = -10.8 DEGREES REMARK 500 ARG F 95 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 GLU F 108 OE1 - CD - OE2 ANGL. DEV. = -10.6 DEGREES REMARK 500 MET F 197 CG - SD - CE ANGL. DEV. = -16.9 DEGREES REMARK 500 ARG F 247 NE - CZ - NH1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ASP F 264 CB - CG - OD1 ANGL. DEV. = 7.4 DEGREES REMARK 500 ARG F 293 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG F 304 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 LEU F 306 CB - CG - CD1 ANGL. DEV. = -11.3 DEGREES REMARK 500 PHE F 327 N - CA - C ANGL. DEV. = 16.3 DEGREES REMARK 500 GLU F 328 CB - CA - C ANGL. DEV. = -21.0 DEGREES REMARK 500 GLU F 328 N - CA - CB ANGL. DEV. = -15.7 DEGREES REMARK 500 GLU F 328 N - CA - C ANGL. DEV. = 39.0 DEGREES REMARK 500 LEU F 329 CB - CG - CD1 ANGL. DEV. = 10.7 DEGREES REMARK 500 LEU F 329 N - CA - C ANGL. DEV. = 17.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 35 14.26 -150.78 REMARK 500 ASP A 96 -8.99 -59.03 REMARK 500 ASP A 117 4.02 91.53 REMARK 500 SER A 145 -157.88 -160.17 REMARK 500 SER A 239 42.21 -97.06 REMARK 500 PHE A 297 37.83 70.19 REMARK 500 TYR A 298 -76.39 -60.29 REMARK 500 THR A 299 107.57 83.87 REMARK 500 GLU A 328 -88.05 -61.51 REMARK 500 ASP A 346 -109.74 -106.05 REMARK 500 GLN F 12 53.31 38.42 REMARK 500 SER F 35 -5.19 70.84 REMARK 500 SER F 39 72.14 -109.71 REMARK 500 PRO F 116 144.17 -38.97 REMARK 500 THR F 167 -166.17 -128.69 REMARK 500 ASP F 181 1.92 -67.55 REMARK 500 ALA F 196 5.56 -66.09 REMARK 500 LEU F 257 68.20 21.42 REMARK 500 GLU F 259 122.88 174.83 REMARK 500 PHE F 327 -52.47 -120.54 REMARK 500 ASP F 346 -74.36 95.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD2 REMARK 620 2 ASP A 107 OD2 93.1 REMARK 620 3 GLU A 108 OE1 112.8 121.2 REMARK 620 4 2TM A 401 O1A 87.1 77.9 149.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD1 REMARK 620 2 LEU A 10 O 75.7 REMARK 620 3 ASP A 107 OD2 101.0 109.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN F 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 9 OD2 REMARK 620 2 ASP F 107 OD1 102.5 REMARK 620 3 GLU F 108 CD 92.7 100.3 REMARK 620 4 GLU F 108 OE2 115.6 105.9 26.3 REMARK 620 5 2TM F 401 O1A 79.6 100.6 158.8 144.9 REMARK 620 6 HOH F 501 O 63.5 153.8 102.3 100.2 56.6 REMARK 620 7 DC H 873 O3' 169.8 67.3 89.5 69.2 101.6 125.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN F 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP F 9 CG REMARK 620 2 ASP F 9 OD1 24.5 REMARK 620 3 LEU F 10 O 100.9 83.7 REMARK 620 4 ASP F 107 OD2 100.1 120.3 99.3 REMARK 620 5 2TM F 401 O1G 92.9 80.0 103.3 151.3 REMARK 620 6 2TM F 401 O2B 162.9 142.0 80.8 96.4 70.2 REMARK 620 7 2TM F 401 O1A 91.3 107.4 167.7 80.0 74.1 87.0 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2TM A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2TM F 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN F 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN F 403 DBREF 6JUS A 1 356 UNP A0QR77 A0QR77_MYCS2 1 356 DBREF 6JUS B 837 854 PDB 6JUS 6JUS 837 854 DBREF 6JUS C 856 873 PDB 6JUS 6JUS 856 873 DBREF 6JUS F 1 356 UNP A0QR77 A0QR77_MYCS2 1 356 DBREF 6JUS G 837 854 PDB 6JUS 6JUS 837 854 DBREF 6JUS H 856 873 PDB 6JUS 6JUS 856 873 SEQRES 1 A 356 MET THR LYS TRP VAL LEU HIS VAL ASP LEU ASP GLN PHE SEQRES 2 A 356 LEU ALA SER VAL GLU LEU ARG ARG ARG PRO ASP LEU ARG SEQRES 3 A 356 GLY GLN PRO VAL ILE VAL GLY GLY SER GLY ASP PRO SER SEQRES 4 A 356 GLU PRO ARG LYS VAL VAL THR CYS ALA SER TYR GLU ALA SEQRES 5 A 356 ARG GLU PHE GLY VAL HIS ALA GLY MET PRO LEU ARG ALA SEQRES 6 A 356 ALA ALA ARG ARG CYS PRO ASP ALA THR PHE LEU PRO SER SEQRES 7 A 356 ASP PRO ALA ALA TYR ASP GLU ALA SER GLU GLN VAL MET SEQRES 8 A 356 GLY LEU LEU ARG ASP LEU GLY HIS PRO LEU GLU VAL TRP SEQRES 9 A 356 GLY TRP ASP GLU ALA TYR LEU GLY ALA ASP LEU PRO ASP SEQRES 10 A 356 GLU SER ASP PRO VAL GLU VAL ALA GLU ARG ILE ARG THR SEQRES 11 A 356 VAL VAL ALA ALA GLU THR GLY LEU SER CYS SER VAL GLY SEQRES 12 A 356 ILE SER ASP ASN LYS GLN ARG ALA LYS VAL ALA THR GLY SEQRES 13 A 356 PHE ALA LYS PRO ALA GLY ILE TYR VAL LEU THR GLU ALA SEQRES 14 A 356 ASN TRP MET THR VAL MET GLY ASP ARG PRO PRO ASP ALA SEQRES 15 A 356 LEU TRP GLY VAL GLY PRO LYS THR THR LYS LYS LEU ALA SEQRES 16 A 356 ALA MET GLY ILE THR THR VAL ALA ASP LEU ALA VAL THR SEQRES 17 A 356 ASP PRO SER VAL LEU THR THR ALA PHE GLY PRO SER THR SEQRES 18 A 356 GLY LEU TRP LEU LEU LEU LEU ALA LYS GLY GLY GLY ASP SEQRES 19 A 356 THR GLU VAL SER SER GLU PRO TRP VAL PRO ARG SER ARG SEQRES 20 A 356 SER HIS VAL VAL THR PHE PRO GLN ASP LEU THR GLU ARG SEQRES 21 A 356 ARG GLU MET ASP SER ALA VAL ARG ASP LEU ALA LEU GLN SEQRES 22 A 356 THR LEU ALA GLU ILE VAL GLU GLN GLY ARG ILE VAL THR SEQRES 23 A 356 ARG VAL ALA VAL THR VAL ARG THR SER THR PHE TYR THR SEQRES 24 A 356 ARG THR LYS ILE ARG LYS LEU PRO ALA PRO SER THR ASP SEQRES 25 A 356 ALA GLY GLN ILE VAL ASP THR ALA LEU ALA VAL LEU ASP SEQRES 26 A 356 GLN PHE GLU LEU ASP ARG PRO VAL ARG LEU LEU GLY VAL SEQRES 27 A 356 ARG LEU GLU LEU ALA MET ASP ASP VAL PRO ARG PRO ALA SEQRES 28 A 356 VAL THR ALA GLY THR SEQRES 1 B 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 B 18 DG DA DC DC DC SEQRES 1 C 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 C 18 DG DA DC DC DC SEQRES 1 F 356 MET THR LYS TRP VAL LEU HIS VAL ASP LEU ASP GLN PHE SEQRES 2 F 356 LEU ALA SER VAL GLU LEU ARG ARG ARG PRO ASP LEU ARG SEQRES 3 F 356 GLY GLN PRO VAL ILE VAL GLY GLY SER GLY ASP PRO SER SEQRES 4 F 356 GLU PRO ARG LYS VAL VAL THR CYS ALA SER TYR GLU ALA SEQRES 5 F 356 ARG GLU PHE GLY VAL HIS ALA GLY MET PRO LEU ARG ALA SEQRES 6 F 356 ALA ALA ARG ARG CYS PRO ASP ALA THR PHE LEU PRO SER SEQRES 7 F 356 ASP PRO ALA ALA TYR ASP GLU ALA SER GLU GLN VAL MET SEQRES 8 F 356 GLY LEU LEU ARG ASP LEU GLY HIS PRO LEU GLU VAL TRP SEQRES 9 F 356 GLY TRP ASP GLU ALA TYR LEU GLY ALA ASP LEU PRO ASP SEQRES 10 F 356 GLU SER ASP PRO VAL GLU VAL ALA GLU ARG ILE ARG THR SEQRES 11 F 356 VAL VAL ALA ALA GLU THR GLY LEU SER CYS SER VAL GLY SEQRES 12 F 356 ILE SER ASP ASN LYS GLN ARG ALA LYS VAL ALA THR GLY SEQRES 13 F 356 PHE ALA LYS PRO ALA GLY ILE TYR VAL LEU THR GLU ALA SEQRES 14 F 356 ASN TRP MET THR VAL MET GLY ASP ARG PRO PRO ASP ALA SEQRES 15 F 356 LEU TRP GLY VAL GLY PRO LYS THR THR LYS LYS LEU ALA SEQRES 16 F 356 ALA MET GLY ILE THR THR VAL ALA ASP LEU ALA VAL THR SEQRES 17 F 356 ASP PRO SER VAL LEU THR THR ALA PHE GLY PRO SER THR SEQRES 18 F 356 GLY LEU TRP LEU LEU LEU LEU ALA LYS GLY GLY GLY ASP SEQRES 19 F 356 THR GLU VAL SER SER GLU PRO TRP VAL PRO ARG SER ARG SEQRES 20 F 356 SER HIS VAL VAL THR PHE PRO GLN ASP LEU THR GLU ARG SEQRES 21 F 356 ARG GLU MET ASP SER ALA VAL ARG ASP LEU ALA LEU GLN SEQRES 22 F 356 THR LEU ALA GLU ILE VAL GLU GLN GLY ARG ILE VAL THR SEQRES 23 F 356 ARG VAL ALA VAL THR VAL ARG THR SER THR PHE TYR THR SEQRES 24 F 356 ARG THR LYS ILE ARG LYS LEU PRO ALA PRO SER THR ASP SEQRES 25 F 356 ALA GLY GLN ILE VAL ASP THR ALA LEU ALA VAL LEU ASP SEQRES 26 F 356 GLN PHE GLU LEU ASP ARG PRO VAL ARG LEU LEU GLY VAL SEQRES 27 F 356 ARG LEU GLU LEU ALA MET ASP ASP VAL PRO ARG PRO ALA SEQRES 28 F 356 VAL THR ALA GLY THR SEQRES 1 G 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 G 18 DG DA DC DC DC SEQRES 1 H 18 DT DC DT DG DG DG DG DT DC DC DT DA DG SEQRES 2 H 18 DG DA DC DC DC HET 2TM A 401 29 HET MN A 402 1 HET MN A 403 1 HET 2TM F 401 29 HET MN F 402 1 HET MN F 403 1 HETNAM 2TM 5'-O-[(S)-HYDROXY{[(S)-HYDROXY(PHOSPHONOOXY) HETNAM 2 2TM PHOSPHORYL]METHYL}PHOSPHORYL]CYTIDINE HETNAM MN MANGANESE (II) ION HETSYN 2TM CMPCPP FORMUL 7 2TM 2(C10 H18 N3 O13 P3) FORMUL 8 MN 4(MN 2+) FORMUL 13 HOH *89(H2 O) HELIX 1 AA1 GLN A 12 ARG A 22 1 11 HELIX 2 AA2 PRO A 23 ARG A 26 5 4 HELIX 3 AA3 SER A 49 GLU A 54 1 6 HELIX 4 AA4 PRO A 62 CYS A 70 1 9 HELIX 5 AA5 ASP A 79 ASP A 96 1 18 HELIX 6 AA6 ASP A 120 GLY A 137 1 18 HELIX 7 AA7 ASN A 147 LYS A 159 1 13 HELIX 8 AA8 ASN A 170 GLY A 176 1 7 HELIX 9 AA9 PRO A 179 LEU A 183 5 5 HELIX 10 AB1 GLY A 187 ALA A 196 1 10 HELIX 11 AB2 THR A 201 VAL A 207 1 7 HELIX 12 AB3 ASP A 209 GLY A 218 1 10 HELIX 13 AB4 SER A 220 LYS A 230 1 11 HELIX 14 AB5 GLU A 259 GLN A 281 1 23 HELIX 15 AB6 ASP A 312 ASP A 325 1 14 HELIX 16 AB7 GLN F 12 ARG F 21 1 10 HELIX 17 AB8 ARG F 22 ARG F 26 5 5 HELIX 18 AB9 SER F 49 GLU F 54 1 6 HELIX 19 AC1 PRO F 62 CYS F 70 1 9 HELIX 20 AC2 ASP F 79 ASP F 96 1 18 HELIX 21 AC3 ASP F 120 GLY F 137 1 18 HELIX 22 AC4 ASN F 147 LYS F 159 1 13 HELIX 23 AC5 ASN F 170 GLY F 176 1 7 HELIX 24 AC6 PRO F 179 LEU F 183 5 5 HELIX 25 AC7 GLY F 187 ALA F 196 1 10 HELIX 26 AC8 THR F 201 VAL F 207 1 7 HELIX 27 AC9 ASP F 209 GLY F 218 1 10 HELIX 28 AD1 SER F 220 LYS F 230 1 11 HELIX 29 AD2 GLU F 259 GLN F 281 1 23 HELIX 30 AD3 ASP F 312 ASP F 325 1 14 SHEET 1 AA1 5 LEU A 101 VAL A 103 0 SHEET 2 AA1 5 ALA A 109 LEU A 115 -1 O TYR A 110 N GLU A 102 SHEET 3 AA1 5 THR A 2 LEU A 10 -1 N LEU A 6 O LEU A 111 SHEET 4 AA1 5 CYS A 140 SER A 145 -1 O SER A 145 N VAL A 5 SHEET 5 AA1 5 ILE A 163 VAL A 165 1 O TYR A 164 N ILE A 144 SHEET 1 AA2 3 VAL A 45 ALA A 48 0 SHEET 2 AA2 3 VAL A 30 GLY A 33 -1 N VAL A 32 O CYS A 47 SHEET 3 AA2 3 THR A 74 PRO A 77 1 O THR A 74 N ILE A 31 SHEET 1 AA3 4 SER A 246 LEU A 257 0 SHEET 2 AA3 4 VAL A 333 LEU A 342 -1 O LEU A 340 N ARG A 247 SHEET 3 AA3 4 VAL A 285 THR A 294 -1 N THR A 286 O GLU A 341 SHEET 4 AA3 4 ARG A 300 SER A 310 -1 O LYS A 302 N VAL A 290 SHEET 1 AA4 5 LEU F 101 TRP F 104 0 SHEET 2 AA4 5 GLU F 108 ASP F 114 -1 O TYR F 110 N GLU F 102 SHEET 3 AA4 5 LYS F 3 LEU F 10 -1 N LEU F 6 O LEU F 111 SHEET 4 AA4 5 CYS F 140 SER F 145 -1 O SER F 145 N VAL F 5 SHEET 5 AA4 5 ILE F 163 VAL F 165 1 O TYR F 164 N ILE F 144 SHEET 1 AA5 3 CYS F 47 ALA F 48 0 SHEET 2 AA5 3 VAL F 30 VAL F 32 -1 N VAL F 32 O CYS F 47 SHEET 3 AA5 3 THR F 74 LEU F 76 1 O THR F 74 N ILE F 31 SHEET 1 AA6 4 SER F 246 THR F 252 0 SHEET 2 AA6 4 VAL F 333 LEU F 342 -1 O VAL F 338 N HIS F 249 SHEET 3 AA6 4 VAL F 285 THR F 294 -1 N THR F 286 O GLU F 341 SHEET 4 AA6 4 THR F 299 SER F 310 -1 O ARG F 300 N VAL F 292 LINK OD2 ASP A 9 MN MN A 402 1555 1555 2.26 LINK OD1 ASP A 9 MN MN A 403 1555 1555 2.15 LINK O LEU A 10 MN MN A 403 1555 1555 2.50 LINK OD2 ASP A 107 MN MN A 402 1555 1555 2.56 LINK OD2 ASP A 107 MN MN A 403 1555 1555 2.23 LINK OE1 GLU A 108 MN MN A 402 1555 1555 2.11 LINK O1A 2TM A 401 MN MN A 402 1555 1555 2.27 LINK OD2 ASP F 9 MN MN F 402 1555 1555 2.15 LINK CG ASP F 9 MN MN F 403 1555 1555 2.74 LINK OD1 ASP F 9 MN MN F 403 1555 1555 1.99 LINK O LEU F 10 MN MN F 403 1555 1555 2.52 LINK OD1 ASP F 107 MN MN F 402 1555 1555 2.39 LINK OD2 ASP F 107 MN MN F 403 1555 1555 1.96 LINK CD GLU F 108 MN MN F 402 1555 1555 2.70 LINK OE2 GLU F 108 MN MN F 402 1555 1555 2.42 LINK O1A 2TM F 401 MN MN F 402 1555 1555 2.58 LINK O1G 2TM F 401 MN MN F 403 1555 1555 2.68 LINK O2B 2TM F 401 MN MN F 403 1555 1555 1.72 LINK O1A 2TM F 401 MN MN F 403 1555 1555 2.45 LINK MN MN F 402 O HOH F 501 1555 1555 1.99 LINK MN MN F 402 O3' DC H 873 1555 1555 2.73 CISPEP 1 LYS A 159 PRO A 160 0 -3.87 CISPEP 2 LYS F 159 PRO F 160 0 -0.67 SITE 1 AC1 17 ASP A 9 LEU A 10 ASP A 11 GLN A 12 SITE 2 AC1 17 PHE A 13 LEU A 14 THR A 46 CYS A 47 SITE 3 AC1 17 TYR A 50 ARG A 53 ASP A 107 LYS A 159 SITE 4 AC1 17 MN A 402 MN A 403 DG B 840 DG B 841 SITE 5 AC1 17 DC C 873 SITE 1 AC2 5 ASP A 9 ASP A 107 GLU A 108 2TM A 401 SITE 2 AC2 5 MN A 403 SITE 1 AC3 6 ASP A 9 LEU A 10 ASP A 107 LYS A 159 SITE 2 AC3 6 2TM A 401 MN A 402 SITE 1 AC4 18 ASP F 9 LEU F 10 ASP F 11 GLN F 12 SITE 2 AC4 18 PHE F 13 LEU F 14 THR F 46 CYS F 47 SITE 3 AC4 18 TYR F 50 ARG F 53 ASP F 107 LYS F 159 SITE 4 AC4 18 MN F 402 MN F 403 HOH F 501 HOH F 502 SITE 5 AC4 18 DG G 840 DC H 873 SITE 1 AC5 7 ASP F 9 ASP F 107 GLU F 108 2TM F 401 SITE 2 AC5 7 MN F 403 HOH F 501 DC H 873 SITE 1 AC6 5 ASP F 9 LEU F 10 ASP F 107 2TM F 401 SITE 2 AC6 5 MN F 402 CRYST1 53.730 80.340 208.720 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018612 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012447 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004791 0.00000