HEADER METAL BINDING PROTEIN 28-APR-19 6JYV TITLE STRUCTURE OF AN ISOPENICILLIN N SYNTHASE FROM PSEUDOMONAS AERUGINOSA TITLE 2 PAO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE IRON/ASCORBATE OXIDOREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ISOPENICILLIN N SYNTHASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 6 / 1C / PRS 101 / PAO1; SOURCE 7 GENE: PA4191; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS IRON BINDING; ISOPENICILLIN N SYNTHASE; BETA-LACTAM ANTIBIOTIC KEYWDS 2 SYNTHESIS, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.HAO,S.CHE,R.WANG,R.LIU,Q.ZHANG,M.BARTLAM REVDAT 4 22-NOV-23 6JYV 1 LINK REVDAT 3 19-JUN-19 6JYV 1 JRNL REVDAT 2 29-MAY-19 6JYV 1 JRNL REVDAT 1 22-MAY-19 6JYV 0 JRNL AUTH H.ZHANG,S.CHE,R.WANG,R.LIU,Q.ZHANG,M.BARTLAM JRNL TITL STRUCTURAL CHARACTERIZATION OF AN ISOPENICILLIN N SYNTHASE JRNL TITL 2 FAMILY OXYGENASE FROM PSEUDOMONAS AERUGINOSA PAO1. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 514 1031 2019 JRNL REFN ESSN 1090-2104 JRNL PMID 31097228 JRNL DOI 10.1016/J.BBRC.2019.05.062 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 75323 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 3634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.9208 - 4.8876 0.94 2794 146 0.1727 0.1875 REMARK 3 2 4.8876 - 3.8809 0.86 2515 121 0.1405 0.1936 REMARK 3 3 3.8809 - 3.3908 0.91 2677 151 0.1484 0.1922 REMARK 3 4 3.3908 - 3.0809 0.95 2793 121 0.1601 0.2150 REMARK 3 5 3.0809 - 2.8602 0.97 2806 157 0.1626 0.2174 REMARK 3 6 2.8602 - 2.6916 0.95 2765 140 0.1540 0.1773 REMARK 3 7 2.6916 - 2.5569 0.97 2816 181 0.1508 0.1959 REMARK 3 8 2.5569 - 2.4456 0.97 2796 163 0.1534 0.2019 REMARK 3 9 2.4456 - 2.3515 0.97 2804 137 0.1548 0.2072 REMARK 3 10 2.3515 - 2.2703 0.97 2825 141 0.1480 0.2057 REMARK 3 11 2.2703 - 2.1994 0.97 2800 152 0.1586 0.1841 REMARK 3 12 2.1994 - 2.1365 0.94 2737 131 0.1609 0.2072 REMARK 3 13 2.1365 - 2.0803 0.96 2820 125 0.1662 0.2268 REMARK 3 14 2.0803 - 2.0295 0.96 2799 137 0.1682 0.2011 REMARK 3 15 2.0295 - 1.9834 0.96 2802 157 0.1715 0.2489 REMARK 3 16 1.9834 - 1.9412 0.96 2787 121 0.1752 0.2170 REMARK 3 17 1.9412 - 1.9024 0.96 2815 142 0.1637 0.2147 REMARK 3 18 1.9024 - 1.8665 0.96 2771 142 0.1745 0.2144 REMARK 3 19 1.8665 - 1.8331 0.96 2786 167 0.1727 0.2209 REMARK 3 20 1.8331 - 1.8021 0.94 2746 151 0.1732 0.2190 REMARK 3 21 1.8021 - 1.7730 0.95 2729 120 0.1800 0.2342 REMARK 3 22 1.7730 - 1.7457 0.95 2789 158 0.1874 0.2585 REMARK 3 23 1.7457 - 1.7200 0.94 2734 127 0.1966 0.2324 REMARK 3 24 1.7200 - 1.6958 0.94 2718 132 0.1965 0.2265 REMARK 3 25 1.6958 - 1.6729 0.93 2755 114 0.2043 0.3166 REMARK 3 26 1.6729 - 1.6512 0.85 2510 100 0.2049 0.2585 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5368 REMARK 3 ANGLE : 0.995 7298 REMARK 3 CHIRALITY : 0.052 761 REMARK 3 PLANARITY : 0.007 979 REMARK 3 DIHEDRAL : 3.714 4411 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6JYV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1300011992. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75702 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1IPS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 3350, 0.1 M BIS-TRIS REMARK 280 PROPANE, PH 6.5, 0.2 M NAF, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 57.84500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 LEU A 334 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 PRO B 4 REMARK 465 SER B 5 REMARK 465 LEU B 334 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 31 O HOH A 505 1.50 REMARK 500 HH12 ARG B 23 O HOH B 501 1.57 REMARK 500 HH21 ARG B 23 O HOH B 513 1.58 REMARK 500 O HOH A 501 O HOH A 825 1.71 REMARK 500 OE1 GLU A 135 O HOH A 501 1.76 REMARK 500 OE2 GLU A 135 O HOH A 502 1.80 REMARK 500 O HOH B 501 O HOH B 718 1.88 REMARK 500 NH2 ARG A 246 O HOH A 503 1.88 REMARK 500 O HOH A 546 O HOH A 938 1.90 REMARK 500 O HOH B 766 O HOH B 973 1.91 REMARK 500 O HOH A 502 O HOH A 948 1.94 REMARK 500 O LEU B 157 O HOH B 501 1.97 REMARK 500 O HOH B 575 O HOH B 643 2.00 REMARK 500 O HOH A 888 O HOH B 1032 2.01 REMARK 500 O HOH A 590 O HOH A 765 2.02 REMARK 500 O HOH A 659 O HOH A 960 2.02 REMARK 500 O HOH B 951 O HOH B 1107 2.05 REMARK 500 OE2 GLU A 75 O HOH A 504 2.06 REMARK 500 O HOH A 825 O HOH A 842 2.07 REMARK 500 O HOH A 829 O HOH A 902 2.08 REMARK 500 O HOH A 911 O HOH A 1023 2.09 REMARK 500 OD2 ASP B 18 O HOH B 502 2.09 REMARK 500 O HOH A 547 O HOH A 827 2.10 REMARK 500 O HOH A 910 O HOH A 952 2.12 REMARK 500 O HOH A 867 O HOH A 1073 2.12 REMARK 500 O HOH B 617 O HOH B 1008 2.12 REMARK 500 O HOH B 880 O HOH B 927 2.13 REMARK 500 O HOH A 857 O HOH A 867 2.13 REMARK 500 O HOH A 976 O HOH A 1077 2.15 REMARK 500 O HOH A 1047 O HOH A 1076 2.15 REMARK 500 OE1 GLN B 195 O HOH B 503 2.16 REMARK 500 O HOH A 946 O HOH A 955 2.17 REMARK 500 O HOH A 962 O HOH A 1049 2.17 REMARK 500 OD2 ASP A 65 OG1 THR A 67 2.17 REMARK 500 O HOH A 503 O HOH A 899 2.17 REMARK 500 OE2 GLU B 153 O HOH B 504 2.17 REMARK 500 NH1 ARG A 31 O HOH A 505 2.17 REMARK 500 O HOH A 734 O HOH A 1007 2.18 REMARK 500 O HOH B 509 O HOH B 584 2.18 REMARK 500 O HOH A 982 O HOH A 1072 2.18 REMARK 500 O HOH A 623 O HOH A 629 2.18 REMARK 500 O HOH B 579 O HOH B 844 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 162 NH1 ARG B 221 2655 2.05 REMARK 500 O HOH A 882 O HOH B 960 1554 2.06 REMARK 500 O HOH A 950 O HOH B 624 2655 2.14 REMARK 500 O HOH A 851 O HOH B 802 2656 2.16 REMARK 500 O HOH A 1068 O HOH B 1075 1455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 28 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 28 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 81 67.81 74.81 REMARK 500 TYR A 170 -32.71 -138.18 REMARK 500 GLN A 195 5.62 -68.26 REMARK 500 LEU A 206 -66.26 -96.40 REMARK 500 TRP B 81 67.88 75.65 REMARK 500 TYR B 170 -31.68 -130.49 REMARK 500 LEU B 206 -64.62 -93.99 REMARK 500 ASN B 306 59.93 -144.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1091 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A1092 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A1093 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH A1094 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A1095 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH A1096 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A1097 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B1112 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B1113 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B1114 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH B1115 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH B1116 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B1117 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH B1118 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B1119 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH B1120 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH B1121 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH B1122 DISTANCE = 6.89 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 203 OD1 REMARK 620 2 HOH A 963 O 114.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 401 DBREF 6JYV A 1 334 UNP Q9HWJ0 Q9HWJ0_PSEAE 1 334 DBREF 6JYV B 1 334 UNP Q9HWJ0 Q9HWJ0_PSEAE 1 334 SEQADV 6JYV GLY A -4 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV PRO A -3 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV LEU A -2 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV GLY A -1 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV SER A 0 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV GLY B -4 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV PRO B -3 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV LEU B -2 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV GLY B -1 UNP Q9HWJ0 EXPRESSION TAG SEQADV 6JYV SER B 0 UNP Q9HWJ0 EXPRESSION TAG SEQRES 1 A 339 GLY PRO LEU GLY SER MET SER THR PRO SER LEU PRO ILE SEQRES 2 A 339 ILE ASP ILE ALA ALA LEU ALA GLY SER ASP PRO ALA ALA SEQRES 3 A 339 ARG ARG SER VAL ALA VAL ARG ILE ASP ARG ALA CYS ARG SEQRES 4 A 339 GLU GLN GLY PHE PHE TYR VAL VAL GLY HIS GLY VAL GLU SEQRES 5 A 339 ALA GLN LEU VAL GLU ARG LEU GLU ARG LEU ALA ARG GLN SEQRES 6 A 339 PHE PHE ALA LEU ASP GLU THR SER LYS LEU ARG TRP ARG SEQRES 7 A 339 MET GLU LEU GLY GLY ARG ALA TRP ARG GLY TYR PHE PRO SEQRES 8 A 339 LEU GLY GLY GLU LEU THR SER ASN ARG PRO ASP TRP LYS SEQRES 9 A 339 GLU GLY LEU TYR LEU GLY SER GLU LEU ASP ALA GLU HIS SEQRES 10 A 339 PRO GLU VAL ARG ALA GLY THR PRO LEU HIS GLY ALA ASN SEQRES 11 A 339 LEU PHE PRO GLU VAL PRO GLY LEU ARG GLU THR LEU LEU SEQRES 12 A 339 GLU TYR LEU ASP ALA THR THR ARG VAL GLY HIS ARG LEU SEQRES 13 A 339 MET GLU GLY ILE ALA LEU GLY LEU GLY LEU GLU ALA ASP SEQRES 14 A 339 TYR PHE ALA ALA ARG TYR THR GLY ASP PRO LEU ILE LEU SEQRES 15 A 339 PHE ARG LEU PHE ASN TYR PRO SER GLN PRO VAL PRO GLU SEQRES 16 A 339 GLY LEU ASP VAL GLN TRP GLY VAL GLY GLU HIS THR ASP SEQRES 17 A 339 TYR GLY LEU LEU THR LEU LEU HIS GLN ASP ALA ILE GLY SEQRES 18 A 339 GLY LEU GLN VAL ARG THR PRO GLN GLY TRP LEU GLU ALA SEQRES 19 A 339 PRO PRO ILE PRO GLY SER PHE VAL CYS ASN LEU GLY ASP SEQRES 20 A 339 MET LEU GLU ARG MET THR GLY GLY LEU TYR ARG SER THR SEQRES 21 A 339 PRO HIS ARG VAL ALA ARG ASN THR SER GLY ARG ASP ARG SEQRES 22 A 339 LEU SER PHE PRO LEU PHE PHE ASP PRO ASN PHE HIS ALA SEQRES 23 A 339 ARG VAL GLN PRO ILE GLU GLY LEU PRO GLU VAL PRO GLU SEQRES 24 A 339 GLN ASP ASP SER ALA ARG ARG TRP ASP GLN ALA ASN VAL SEQRES 25 A 339 HIS ALA PHE HIS GLY GLU TYR GLY ASP TYR LEU LEU ASN SEQRES 26 A 339 LYS VAL ALA LYS VAL PHE PRO GLN LEU ARG ARG ASP LEU SEQRES 27 A 339 LEU SEQRES 1 B 339 GLY PRO LEU GLY SER MET SER THR PRO SER LEU PRO ILE SEQRES 2 B 339 ILE ASP ILE ALA ALA LEU ALA GLY SER ASP PRO ALA ALA SEQRES 3 B 339 ARG ARG SER VAL ALA VAL ARG ILE ASP ARG ALA CYS ARG SEQRES 4 B 339 GLU GLN GLY PHE PHE TYR VAL VAL GLY HIS GLY VAL GLU SEQRES 5 B 339 ALA GLN LEU VAL GLU ARG LEU GLU ARG LEU ALA ARG GLN SEQRES 6 B 339 PHE PHE ALA LEU ASP GLU THR SER LYS LEU ARG TRP ARG SEQRES 7 B 339 MET GLU LEU GLY GLY ARG ALA TRP ARG GLY TYR PHE PRO SEQRES 8 B 339 LEU GLY GLY GLU LEU THR SER ASN ARG PRO ASP TRP LYS SEQRES 9 B 339 GLU GLY LEU TYR LEU GLY SER GLU LEU ASP ALA GLU HIS SEQRES 10 B 339 PRO GLU VAL ARG ALA GLY THR PRO LEU HIS GLY ALA ASN SEQRES 11 B 339 LEU PHE PRO GLU VAL PRO GLY LEU ARG GLU THR LEU LEU SEQRES 12 B 339 GLU TYR LEU ASP ALA THR THR ARG VAL GLY HIS ARG LEU SEQRES 13 B 339 MET GLU GLY ILE ALA LEU GLY LEU GLY LEU GLU ALA ASP SEQRES 14 B 339 TYR PHE ALA ALA ARG TYR THR GLY ASP PRO LEU ILE LEU SEQRES 15 B 339 PHE ARG LEU PHE ASN TYR PRO SER GLN PRO VAL PRO GLU SEQRES 16 B 339 GLY LEU ASP VAL GLN TRP GLY VAL GLY GLU HIS THR ASP SEQRES 17 B 339 TYR GLY LEU LEU THR LEU LEU HIS GLN ASP ALA ILE GLY SEQRES 18 B 339 GLY LEU GLN VAL ARG THR PRO GLN GLY TRP LEU GLU ALA SEQRES 19 B 339 PRO PRO ILE PRO GLY SER PHE VAL CYS ASN LEU GLY ASP SEQRES 20 B 339 MET LEU GLU ARG MET THR GLY GLY LEU TYR ARG SER THR SEQRES 21 B 339 PRO HIS ARG VAL ALA ARG ASN THR SER GLY ARG ASP ARG SEQRES 22 B 339 LEU SER PHE PRO LEU PHE PHE ASP PRO ASN PHE HIS ALA SEQRES 23 B 339 ARG VAL GLN PRO ILE GLU GLY LEU PRO GLU VAL PRO GLU SEQRES 24 B 339 GLN ASP ASP SER ALA ARG ARG TRP ASP GLN ALA ASN VAL SEQRES 25 B 339 HIS ALA PHE HIS GLY GLU TYR GLY ASP TYR LEU LEU ASN SEQRES 26 B 339 LYS VAL ALA LYS VAL PHE PRO GLN LEU ARG ARG ASP LEU SEQRES 27 B 339 LEU HET NA A 401 1 HET NA B 401 1 HETNAM NA SODIUM ION FORMUL 3 NA 2(NA 1+) FORMUL 5 HOH *1219(H2 O) HELIX 1 AA1 ALA A 12 GLY A 16 5 5 HELIX 2 AA2 ASP A 18 GLN A 36 1 19 HELIX 3 AA3 GLU A 47 ALA A 63 1 17 HELIX 4 AA4 ASP A 65 LEU A 70 1 6 HELIX 5 AA5 ARG A 71 TRP A 81 5 11 HELIX 6 AA6 HIS A 112 GLY A 118 1 7 HELIX 7 AA7 GLY A 132 LEU A 159 1 28 HELIX 8 AA8 ASP A 164 TYR A 170 1 7 HELIX 9 AA9 GLY A 241 THR A 248 1 8 HELIX 10 AB1 GLN A 295 ASN A 306 1 12 HELIX 11 AB2 ASN A 306 GLY A 312 1 7 HELIX 12 AB3 GLU A 313 ALA A 323 1 11 HELIX 13 AB4 ALA B 12 GLY B 16 5 5 HELIX 14 AB5 ASP B 18 GLN B 36 1 19 HELIX 15 AB6 GLU B 47 LEU B 64 1 18 HELIX 16 AB7 ASP B 65 LEU B 70 1 6 HELIX 17 AB8 ARG B 71 TRP B 81 5 11 HELIX 18 AB9 HIS B 112 GLY B 118 1 7 HELIX 19 AC1 GLY B 132 LEU B 159 1 28 HELIX 20 AC2 ASP B 164 TYR B 170 1 7 HELIX 21 AC3 GLY B 241 THR B 248 1 8 HELIX 22 AC4 GLN B 295 ASN B 306 1 12 HELIX 23 AC5 ASN B 306 GLY B 312 1 7 HELIX 24 AC6 GLU B 313 ALA B 323 1 11 HELIX 25 AC7 PHE B 326 ARG B 331 5 6 SHEET 1 AA1 8 ILE A 8 ASP A 10 0 SHEET 2 AA1 8 PHE A 38 VAL A 42 1 O TYR A 40 N ILE A 9 SHEET 3 AA1 8 PHE A 236 LEU A 240 -1 O CYS A 238 N PHE A 39 SHEET 4 AA1 8 LEU A 207 GLN A 212 -1 N LEU A 210 O VAL A 237 SHEET 5 AA1 8 ARG A 268 ASP A 276 -1 O PHE A 275 N LEU A 207 SHEET 6 AA1 8 LEU A 175 TYR A 183 -1 N LEU A 177 O PHE A 274 SHEET 7 AA1 8 GLU A 100 GLY A 105 -1 N LEU A 104 O PHE A 178 SHEET 8 AA1 8 GLY A 83 PHE A 85 -1 N GLY A 83 O TYR A 103 SHEET 1 AA2 3 GLY A 225 GLU A 228 0 SHEET 2 AA2 3 LEU A 218 THR A 222 -1 N VAL A 220 O LEU A 227 SHEET 3 AA2 3 HIS A 257 VAL A 259 -1 O ARG A 258 N GLN A 219 SHEET 1 AA3 8 ILE B 8 ASP B 10 0 SHEET 2 AA3 8 PHE B 38 VAL B 42 1 O TYR B 40 N ILE B 9 SHEET 3 AA3 8 PHE B 236 LEU B 240 -1 O CYS B 238 N PHE B 39 SHEET 4 AA3 8 LEU B 207 GLN B 212 -1 N LEU B 210 O VAL B 237 SHEET 5 AA3 8 ARG B 268 ASP B 276 -1 O PHE B 275 N LEU B 207 SHEET 6 AA3 8 LEU B 175 TYR B 183 -1 N LEU B 177 O PHE B 274 SHEET 7 AA3 8 GLU B 100 GLY B 105 -1 N LEU B 104 O PHE B 178 SHEET 8 AA3 8 GLY B 83 PHE B 85 -1 N GLY B 83 O TYR B 103 SHEET 1 AA4 3 GLY B 225 GLU B 228 0 SHEET 2 AA4 3 LEU B 218 THR B 222 -1 N VAL B 220 O LEU B 227 SHEET 3 AA4 3 HIS B 257 VAL B 259 -1 O ARG B 258 N GLN B 219 LINK OD1 ASP A 203 NA NA A 401 1555 1555 2.49 LINK NA NA A 401 O HOH A 963 1555 1555 2.24 LINK OD1 ASP B 203 NA NA B 401 1555 1555 2.58 SITE 1 AC1 3 HIS A 201 ASP A 203 HOH A 963 SITE 1 AC2 3 HIS B 201 ASP B 203 HIS B 257 CRYST1 42.510 115.690 68.830 90.00 90.90 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023524 0.000000 0.000370 0.00000 SCALE2 0.000000 0.008644 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014530 0.00000