HEADER OXIDOREDUCTASE 06-MAY-19 6K0E TITLE THE QUINARY COMPLEX OF ASQJ-FE-2OG-DEHYDROCYCLOPEPTIN-DIOXYGEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON/ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ASQJ; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: 4'-METHOXYVIRIDICATIN/ASPOQUINOLONE BIOSYNTHESIS CLUSTER COMPND 5 PROTEIN ASQJ,ASPOQUINOLONE BIOSYNTHESIS PROTEIN J; COMPND 6 EC: 1.14.-.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS (STRAIN FGSC A4 / ATCC SOURCE 3 38163 / CBS 112.46 / NRRL 194 / M139); SOURCE 4 ORGANISM_TAXID: 227321; SOURCE 5 STRAIN: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139; SOURCE 6 GENE: ASQJ, AN9227; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ASQJ, EPOXIDATION, DEHYDROCYCLOPEPTIN, DIOXYGEN-BOUND, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.LIAO,N.L.CHAN REVDAT 2 22-NOV-23 6K0E 1 LINK REVDAT 1 18-MAR-20 6K0E 0 JRNL AUTH H.J.LIAO,N.L.CHAN JRNL TITL THE QUINARY COMPLEX OF JRNL TITL 2 ASQJ-FE-2OG-DEHYDROCYCLOPEPTIN-DIOXYGEN JRNL REF J.AM.CHEM.SOC. 2020 JRNL REFN ESSN 1520-5126 REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 31549 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1535 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 3.7945 0.97 2884 149 0.1487 0.1665 REMARK 3 2 3.7945 - 3.0128 0.99 2802 183 0.1720 0.2036 REMARK 3 3 3.0128 - 2.6322 0.99 2791 150 0.1897 0.2217 REMARK 3 4 2.6322 - 2.3917 0.99 2774 161 0.1902 0.2429 REMARK 3 5 2.3917 - 2.2203 0.98 2756 144 0.1945 0.2236 REMARK 3 6 2.2203 - 2.0894 0.98 2794 116 0.1920 0.2465 REMARK 3 7 2.0894 - 1.9848 0.98 2748 134 0.1967 0.2777 REMARK 3 8 1.9848 - 1.8984 0.98 2733 123 0.2042 0.2841 REMARK 3 9 1.8984 - 1.8254 0.97 2752 125 0.2129 0.2615 REMARK 3 10 1.8254 - 1.7624 0.97 2664 139 0.2156 0.2452 REMARK 3 11 1.7624 - 1.7073 0.82 2316 111 0.2304 0.2413 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2306 REMARK 3 ANGLE : 1.139 3144 REMARK 3 CHIRALITY : 0.060 369 REMARK 3 PLANARITY : 0.008 404 REMARK 3 DIHEDRAL : 8.511 1887 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6573 -27.0709 -20.4678 REMARK 3 T TENSOR REMARK 3 T11: 0.2115 T22: 0.3739 REMARK 3 T33: 0.2630 T12: 0.0993 REMARK 3 T13: 0.0569 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 3.1687 L22: 7.5412 REMARK 3 L33: 3.0514 L12: -0.6264 REMARK 3 L13: 1.8717 L23: 1.5479 REMARK 3 S TENSOR REMARK 3 S11: -0.0227 S12: 0.3152 S13: -0.0274 REMARK 3 S21: -0.4007 S22: 0.0340 S23: -0.5610 REMARK 3 S31: 0.2833 S32: 0.6312 S33: 0.0008 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7323 -5.0218 -8.5072 REMARK 3 T TENSOR REMARK 3 T11: 0.2699 T22: 0.3283 REMARK 3 T33: 0.4399 T12: -0.0946 REMARK 3 T13: -0.0733 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 5.8919 L22: 7.6173 REMARK 3 L33: 6.8277 L12: -5.9725 REMARK 3 L13: -5.9610 L23: 6.2950 REMARK 3 S TENSOR REMARK 3 S11: 0.0226 S12: -0.2810 S13: 0.9508 REMARK 3 S21: -0.0722 S22: 0.1959 S23: -0.5691 REMARK 3 S31: -0.9814 S32: 0.9671 S33: -0.4423 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.8176 -18.4302 -10.3928 REMARK 3 T TENSOR REMARK 3 T11: 0.1774 T22: 0.1591 REMARK 3 T33: 0.1607 T12: 0.0238 REMARK 3 T13: -0.0007 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.8218 L22: 1.3811 REMARK 3 L33: 1.4338 L12: 0.1254 REMARK 3 L13: 0.4055 L23: -0.2228 REMARK 3 S TENSOR REMARK 3 S11: -0.0235 S12: -0.1076 S13: 0.0768 REMARK 3 S21: 0.1343 S22: -0.0116 S23: -0.1273 REMARK 3 S31: -0.0060 S32: 0.1278 S33: 0.0282 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1535 -32.2984 -5.7077 REMARK 3 T TENSOR REMARK 3 T11: 0.2668 T22: 0.2329 REMARK 3 T33: 0.2176 T12: 0.1014 REMARK 3 T13: -0.0134 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 3.6381 L22: 5.3046 REMARK 3 L33: 3.3998 L12: 0.6798 REMARK 3 L13: 1.8190 L23: -0.4604 REMARK 3 S TENSOR REMARK 3 S11: 0.3000 S12: -0.1261 S13: -0.4570 REMARK 3 S21: 0.3514 S22: -0.0700 S23: -0.3614 REMARK 3 S31: 0.5362 S32: 0.1353 S33: -0.2392 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 192 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6073 -22.6004 -7.2516 REMARK 3 T TENSOR REMARK 3 T11: 0.1828 T22: 0.2504 REMARK 3 T33: 0.2152 T12: 0.0365 REMARK 3 T13: -0.0276 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 1.3790 L22: 1.9252 REMARK 3 L33: 1.6066 L12: -0.1980 REMARK 3 L13: 0.3660 L23: 0.0916 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: -0.1093 S13: 0.0137 REMARK 3 S21: 0.2465 S22: 0.0333 S23: -0.4400 REMARK 3 S31: 0.1154 S32: 0.3617 S33: -0.0159 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 233 THROUGH 259 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9928 -7.2107 -19.2457 REMARK 3 T TENSOR REMARK 3 T11: 0.1552 T22: 0.1327 REMARK 3 T33: 0.2255 T12: 0.0103 REMARK 3 T13: -0.0386 T23: 0.0373 REMARK 3 L TENSOR REMARK 3 L11: 2.6664 L22: 3.1881 REMARK 3 L33: 4.5794 L12: 1.7694 REMARK 3 L13: -1.3303 L23: 0.2779 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: 0.0970 S13: 0.4912 REMARK 3 S21: -0.0787 S22: 0.0402 S23: 0.0989 REMARK 3 S31: -0.4385 S32: 0.2021 S33: -0.0828 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 260 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.0875 -8.2396 -27.8502 REMARK 3 T TENSOR REMARK 3 T11: 0.2299 T22: 0.2086 REMARK 3 T33: 0.2372 T12: -0.0158 REMARK 3 T13: -0.0105 T23: 0.0865 REMARK 3 L TENSOR REMARK 3 L11: 3.6652 L22: 3.4326 REMARK 3 L33: 2.8720 L12: 1.2614 REMARK 3 L13: 0.3287 L23: -0.0265 REMARK 3 S TENSOR REMARK 3 S11: -0.1014 S12: 0.5246 S13: 0.5425 REMARK 3 S21: -0.2035 S22: 0.0081 S23: 0.0917 REMARK 3 S31: -0.2980 S32: 0.2275 S33: 0.0291 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K0E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1300012014. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31565 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5Y7R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, IMIDAZOLE, CALCIUM ACETATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.59900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.59900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.90250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.81900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.90250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.81900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.59900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.90250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.81900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 33.59900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.90250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 59.81900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 578 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 714 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 718 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 722 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 ASP B 5 REMARK 465 HIS B 6 REMARK 465 VAL B 7 REMARK 465 LYS B 8 REMARK 465 HIS B 296 REMARK 465 ASP B 297 REMARK 465 ASP B 298 REMARK 465 GLU B 299 REMARK 465 ALA B 300 REMARK 465 GLU B 301 REMARK 465 PRO B 302 REMARK 465 LEU B 303 REMARK 465 CYS B 304 REMARK 465 ARG B 305 REMARK 465 GLU B 306 REMARK 465 THR B 307 REMARK 465 ILE B 308 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 701 O HOH B 705 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 663 O HOH B 663 4554 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 239 CD GLU B 239 OE2 -0.071 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 92 -65.12 -101.25 REMARK 500 MET B 137 -7.71 85.07 REMARK 500 SER B 140 -31.58 -137.78 REMARK 500 ASP B 272 130.08 -37.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 722 DISTANCE = 6.43 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 134 NE2 REMARK 620 2 ASP B 136 OD1 90.3 REMARK 620 3 HIS B 211 NE2 90.1 93.0 REMARK 620 4 AKG B 402 O1 96.0 104.7 161.2 REMARK 620 5 AKG B 402 O5 98.4 171.3 88.1 73.4 REMARK 620 6 PEO B 404 O2 171.0 97.1 94.7 77.1 74.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AKG B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO0 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEO B 404 DBREF 6K0E B 1 308 UNP Q5AR53 ASQJ_EMENI 109 416 SEQADV 6K0E MET B -18 UNP Q5AR53 INITIATING METHIONINE SEQADV 6K0E GLY B -17 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E SER B -16 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E SER B -15 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E HIS B -14 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E HIS B -13 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E HIS B -12 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E HIS B -11 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E HIS B -10 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E HIS B -9 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E SER B -8 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E GLY B -7 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E LEU B -6 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E VAL B -5 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E PRO B -4 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E ARG B -3 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E GLY B -2 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E SER B -1 UNP Q5AR53 EXPRESSION TAG SEQADV 6K0E HIS B 0 UNP Q5AR53 EXPRESSION TAG SEQRES 1 B 327 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLY LEU SEQRES 2 B 327 VAL PRO ARG GLY SER HIS MET THR SER LYS ASP HIS VAL SEQRES 3 B 327 LYS SER GLN ILE PRO ARG LEU SER ALA ILE ASN ASP LEU SEQRES 4 B 327 HIS LYS ILE TRP PRO THR VAL GLU GLU HIS GLY ALA ALA SEQRES 5 B 327 ILE ILE GLU SER PHE LEU SER LEU ASP ILE VAL ARG ARG SEQRES 6 B 327 LEU ASN GLU GLU VAL ASP PRO PHE VAL LYS ILE GLU PRO SEQRES 7 B 327 ILE PRO ALA ALA LYS THR LYS ASP HIS PRO ASN HIS VAL SEQRES 8 B 327 LEU SER THR THR THR ARG LEU VAL ASN VAL LEU ALA PRO SEQRES 9 B 327 ILE SER LYS ALA TYR ARG GLU ASP VAL LEU ASN SER LYS SEQRES 10 B 327 VAL LEU HIS ARG ILE CYS SER ASP ALA PHE HIS VAL TYR SEQRES 11 B 327 GLY ASP TYR TRP VAL LEU MET GLY ALA VAL MET GLU LEU SEQRES 12 B 327 ALA PRO SER ASN PRO ALA GLN PRO LEU HIS ARG ASP MET SEQRES 13 B 327 ARG PHE SER HIS PRO ILE VAL GLU TYR LEU LYS PRO ASP SEQRES 14 B 327 ALA PRO ALA THR SER ILE ASN PHE LEU VAL ALA LEU SER SEQRES 15 B 327 PRO PHE THR ALA GLU ASN GLY ALA THR HIS VAL ILE LEU SEQRES 16 B 327 GLY SER HIS LYS TRP GLN ASN LEU SER ASN VAL SER MET SEQRES 17 B 327 ASP ALA THR VAL ARG ALA LEU MET ASN PRO GLY ASP ALA SEQRES 18 B 327 LEU LEU ILE THR ASP SER THR ILE HIS CYS GLY GLY ALA SEQRES 19 B 327 GLU THR THR GLY THR GLU THR ARG ARG LEU LEU THR ILE SEQRES 20 B 327 THR MET GLY ILE SER GLN LEU THR PRO LEU GLU SER ASN SEQRES 21 B 327 LEU ALA VAL PRO ARG PRO VAL ILE GLU SER LEU THR PRO SEQRES 22 B 327 LEU ALA GLN ARG LEU LEU GLY TRP ALA SER GLN ARG SER SEQRES 23 B 327 ALA ALA PRO ARG ASP ILE GLY LEU LEU THR ILE ARG GLY SEQRES 24 B 327 ASN SER ILE GLU LYS THR MET ASN LEU LYS ALA GLU GLN SEQRES 25 B 327 PRO LEU HIS ASP ASP GLU ALA GLU PRO LEU CYS ARG GLU SEQRES 26 B 327 THR ILE HET FE B 401 1 HET AKG B 402 14 HET CO0 B 403 35 HET PEO B 404 4 HETNAM FE FE (III) ION HETNAM AKG 2-OXOGLUTARIC ACID HETNAM CO0 (3~{Z})-4-METHYL-3-(PHENYLMETHYLIDENE)-1~{H}-1,4- HETNAM 2 CO0 BENZODIAZEPINE-2,5-DIONE HETNAM PEO HYDROGEN PEROXIDE FORMUL 2 FE FE 3+ FORMUL 3 AKG C5 H6 O5 FORMUL 4 CO0 C17 H14 N2 O2 FORMUL 5 PEO H2 O2 FORMUL 6 HOH *222(H2 O) HELIX 1 AA1 ASP B 19 HIS B 21 5 3 HELIX 2 AA2 LYS B 22 GLY B 31 1 10 HELIX 3 AA3 SER B 40 GLU B 58 1 19 HELIX 4 AA4 SER B 87 ASP B 93 1 7 HELIX 5 AA5 SER B 97 HIS B 109 1 13 HELIX 6 AA6 HIS B 141 LEU B 147 5 7 HELIX 7 AA7 GLY B 177 TRP B 181 5 5 HELIX 8 AA8 SER B 188 THR B 192 5 5 HELIX 9 AA9 PRO B 245 GLU B 250 1 6 HELIX 10 AB1 THR B 253 LEU B 260 1 8 HELIX 11 AB2 SER B 282 ASN B 288 1 7 SHEET 1 AA1 7 ARG B 13 SER B 15 0 SHEET 2 AA1 7 ALA B 32 GLU B 36 1 O ILE B 34 N LEU B 14 SHEET 3 AA1 7 ALA B 202 THR B 206 -1 O ALA B 202 N ILE B 35 SHEET 4 AA1 7 SER B 155 ALA B 161 -1 N LEU B 159 O LEU B 203 SHEET 5 AA1 7 ARG B 223 ILE B 232 -1 O LEU B 226 N VAL B 160 SHEET 6 AA1 7 TYR B 114 LEU B 124 -1 N MET B 118 O THR B 229 SHEET 7 AA1 7 THR B 77 VAL B 80 -1 N VAL B 80 O VAL B 121 SHEET 1 AA2 3 VAL B 193 ARG B 194 0 SHEET 2 AA2 3 HIS B 173 VAL B 174 -1 N VAL B 174 O VAL B 193 SHEET 3 AA2 3 HIS B 211 CYS B 212 -1 O CYS B 212 N HIS B 173 LINK NE2 HIS B 134 FE FE B 401 1555 1555 2.21 LINK OD1 ASP B 136 FE FE B 401 1555 1555 2.21 LINK NE2 HIS B 211 FE FE B 401 1555 1555 2.12 LINK FE FE B 401 O1 AKG B 402 1555 1555 2.12 LINK FE FE B 401 O5 AKG B 402 1555 1555 2.32 LINK FE FE B 401 O2 PEO B 404 1555 1555 2.40 SITE 1 AC1 5 HIS B 134 ASP B 136 HIS B 211 AKG B 402 SITE 2 AC1 5 PEO B 404 SITE 1 AC2 12 MET B 122 GLN B 131 HIS B 134 ASP B 136 SITE 2 AC2 12 THR B 172 HIS B 211 GLY B 213 ARG B 223 SITE 3 AC2 12 FE B 401 CO0 B 403 PEO B 404 HOH B 581 SITE 1 AC3 16 ASN B 70 VAL B 72 MET B 118 MET B 122 SITE 2 AC3 16 GLN B 131 HIS B 134 ASP B 136 MET B 137 SITE 3 AC3 16 PHE B 139 THR B 227 AKG B 402 PEO B 404 SITE 4 AC3 16 HOH B 519 HOH B 523 HOH B 603 HOH B 658 SITE 1 AC4 6 ASP B 136 ASN B 157 HIS B 211 FE B 401 SITE 2 AC4 6 AKG B 402 CO0 B 403 CRYST1 73.805 119.638 67.198 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013549 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008359 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014881 0.00000