HEADER HYDROLASE 13-MAY-19 6K26 TITLE CRYSTAL STRUCTURE OF VIBRIO CHOLERAE METHIONINE AMINOPEPTIDASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONINE AMINOPEPTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: METAP,PEPTIDASE M; COMPND 5 EC: 3.4.11.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 VARIANT: SEROTYPE O1; SOURCE 5 ATCC: 39315; SOURCE 6 GENE: MAP; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS HYDROLASE, METAP, METHIONINE AMINOPEPTIDASE EXPDTA X-RAY DIFFRACTION AUTHOR V.PILLALAMARRI,A.ADDLAGATTA REVDAT 3 22-NOV-23 6K26 1 REMARK REVDAT 2 02-DEC-20 6K26 1 JRNL LINK REVDAT 1 20-MAY-20 6K26 0 JRNL AUTH V.PILLALAMARRI,C.G.REDDY,S.C.BALA,A.JANGAM,V.V.KUTTY, JRNL AUTH 2 A.ADDLAGATTA JRNL TITL METHIONINE AMINOPEPTIDASES WITH SHORT SEQUENCE INSERTS JRNL TITL 2 WITHIN THE CATALYTIC DOMAIN ARE DIFFERENTIALLY INHIBITED: JRNL TITL 3 STRUCTURAL AND BIOCHEMICAL STUDIES OF THREE PROTEINS FROM JRNL TITL 4 VIBRIO SPP. JRNL REF EUR.J.MED.CHEM. V. 209 12883 2020 JRNL REFN ISSN 0223-5234 JRNL PMID 33035924 JRNL DOI 10.1016/J.EJMECH.2020.112883 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 51013 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2658 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3610 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 192 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4378 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 318 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.88000 REMARK 3 B22 (A**2) : 0.92000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.14000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.123 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.081 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.772 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4612 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4344 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6270 ; 1.626 ; 1.642 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10139 ; 1.421 ; 1.577 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 598 ; 6.821 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 236 ;34.352 ;23.051 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 848 ;13.523 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;17.995 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 632 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5195 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 907 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K26 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1300012172. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.542 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : VARIMAX CU-HF REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V716 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V716 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53682 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.53100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.6.03 REMARK 200 STARTING MODEL: 2MAT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 12 % PEG 3350, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.00500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ALA A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ALA B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 268 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 74 -114.22 60.38 REMARK 500 GLU A 220 63.13 -155.48 REMARK 500 SER A 237 -9.02 74.50 REMARK 500 TRP A 238 -50.11 -124.45 REMARK 500 ASN B 74 -111.51 54.95 REMARK 500 ALA B 96 -18.29 -142.65 REMARK 500 GLU B 220 59.73 -159.37 REMARK 500 SER B 237 -7.59 80.19 REMARK 500 SER B 272 59.53 -93.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 74 O REMARK 620 2 ILE A 76 O 99.3 REMARK 620 3 SER A 248 O 94.3 132.5 REMARK 620 4 HOH A 493 O 130.3 114.5 88.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 74 O REMARK 620 2 ILE B 76 O 98.0 REMARK 620 3 SER B 248 O 93.6 130.3 REMARK 620 4 HOH B 462 O 131.3 113.5 93.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 301 DBREF1 6K26 A 1 280 UNP A0A085RSZ7_VIBCL DBREF2 6K26 A A0A085RSZ7 1 280 DBREF1 6K26 B 1 280 UNP A0A085RSZ7_VIBCL DBREF2 6K26 B A0A085RSZ7 1 280 SEQADV 6K26 MET A -19 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 GLY A -18 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER A -17 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER A -16 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS A -15 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS A -14 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS A -13 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS A -12 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS A -11 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS A -10 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER A -9 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER A -8 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 GLY A -7 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 LEU A -6 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 VAL A -5 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 PRO A -4 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 ALA A -3 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 GLY A -2 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER A -1 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS A 0 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 MET B -19 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 GLY B -18 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER B -17 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER B -16 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS B -15 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS B -14 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS B -13 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS B -12 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS B -11 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS B -10 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER B -9 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER B -8 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 GLY B -7 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 LEU B -6 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 VAL B -5 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 PRO B -4 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 ALA B -3 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 GLY B -2 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 SER B -1 UNP A0A085RSZ EXPRESSION TAG SEQADV 6K26 HIS B 0 UNP A0A085RSZ EXPRESSION TAG SEQRES 1 A 300 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 300 LEU VAL PRO ALA GLY SER HIS MET SER ILE LYS ILE LYS SEQRES 3 A 300 ASN ALA VAL GLU ILE GLU LYS MET ARG VAL ALA GLY ARG SEQRES 4 A 300 LEU ALA ALA GLU VAL LEU GLU MET ILE GLU PRO HIS VAL SEQRES 5 A 300 LYS ALA GLY VAL THR THR GLU GLU LEU ASP GLN ILE CYS SEQRES 6 A 300 HIS LYS TYR ILE THR GLU VAL GLN GLY ALA ILE PRO ALA SEQRES 7 A 300 PRO LEU ASN TYR HIS GLY PHE PRO LYS SER ILE CYS THR SEQRES 8 A 300 SER ILE ASN HIS ILE VAL CYS HIS GLY ILE PRO ALA SER SEQRES 9 A 300 GLU ASP THR TYR PHE GLY GLN ILE GLN ARG PRO ALA VAL SEQRES 10 A 300 LEU ARG ASP GLY ASP ILE LEU ASN ILE ASP ILE THR VAL SEQRES 11 A 300 ILE LYS ASP GLY TYR HIS GLY ASP THR SER LYS MET PHE SEQRES 12 A 300 LEU ILE GLY ASP VAL SER ILE GLU ASP LYS ARG LEU CYS SEQRES 13 A 300 HIS VAL ALA GLN GLU CYS LEU TYR LEU ALA LEU LYS GLN SEQRES 14 A 300 VAL LYS PRO GLY VAL GLN LEU GLY GLU ILE GLY THR THR SEQRES 15 A 300 ILE GLU LYS HIS ILE LYS THR ASN ASN LYS ASN ASN PRO SEQRES 16 A 300 ARG PHE LYS PHE SER ILE VAL ARG ASP TYR CYS GLY HIS SEQRES 17 A 300 GLY ILE GLY ALA GLU PHE HIS GLU GLU PRO GLN VAL VAL SEQRES 18 A 300 HIS TYR LYS ASN SER ASP ARG THR VAL LEU ARG GLU GLY SEQRES 19 A 300 MET ILE PHE THR ILE GLU PRO MET ILE ASN ALA GLY LYS SEQRES 20 A 300 PHE GLY CYS ARG LEU ASP ASP GLU ASP SER TRP THR VAL SEQRES 21 A 300 TYR THR ALA ASP GLY LYS LYS SER ALA GLN TRP GLU HIS SEQRES 22 A 300 THR ILE LEU VAL THR ALA THR GLY CYS GLU ILE LEU THR SEQRES 23 A 300 LEU ARG SER GLU GLU SER LEU PRO ARG ILE LEU ASN ASN SEQRES 24 A 300 ALA SEQRES 1 B 300 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 300 LEU VAL PRO ALA GLY SER HIS MET SER ILE LYS ILE LYS SEQRES 3 B 300 ASN ALA VAL GLU ILE GLU LYS MET ARG VAL ALA GLY ARG SEQRES 4 B 300 LEU ALA ALA GLU VAL LEU GLU MET ILE GLU PRO HIS VAL SEQRES 5 B 300 LYS ALA GLY VAL THR THR GLU GLU LEU ASP GLN ILE CYS SEQRES 6 B 300 HIS LYS TYR ILE THR GLU VAL GLN GLY ALA ILE PRO ALA SEQRES 7 B 300 PRO LEU ASN TYR HIS GLY PHE PRO LYS SER ILE CYS THR SEQRES 8 B 300 SER ILE ASN HIS ILE VAL CYS HIS GLY ILE PRO ALA SER SEQRES 9 B 300 GLU ASP THR TYR PHE GLY GLN ILE GLN ARG PRO ALA VAL SEQRES 10 B 300 LEU ARG ASP GLY ASP ILE LEU ASN ILE ASP ILE THR VAL SEQRES 11 B 300 ILE LYS ASP GLY TYR HIS GLY ASP THR SER LYS MET PHE SEQRES 12 B 300 LEU ILE GLY ASP VAL SER ILE GLU ASP LYS ARG LEU CYS SEQRES 13 B 300 HIS VAL ALA GLN GLU CYS LEU TYR LEU ALA LEU LYS GLN SEQRES 14 B 300 VAL LYS PRO GLY VAL GLN LEU GLY GLU ILE GLY THR THR SEQRES 15 B 300 ILE GLU LYS HIS ILE LYS THR ASN ASN LYS ASN ASN PRO SEQRES 16 B 300 ARG PHE LYS PHE SER ILE VAL ARG ASP TYR CYS GLY HIS SEQRES 17 B 300 GLY ILE GLY ALA GLU PHE HIS GLU GLU PRO GLN VAL VAL SEQRES 18 B 300 HIS TYR LYS ASN SER ASP ARG THR VAL LEU ARG GLU GLY SEQRES 19 B 300 MET ILE PHE THR ILE GLU PRO MET ILE ASN ALA GLY LYS SEQRES 20 B 300 PHE GLY CYS ARG LEU ASP ASP GLU ASP SER TRP THR VAL SEQRES 21 B 300 TYR THR ALA ASP GLY LYS LYS SER ALA GLN TRP GLU HIS SEQRES 22 B 300 THR ILE LEU VAL THR ALA THR GLY CYS GLU ILE LEU THR SEQRES 23 B 300 LEU ARG SER GLU GLU SER LEU PRO ARG ILE LEU ASN ASN SEQRES 24 B 300 ALA HET NA A 301 1 HET NA B 301 1 HETNAM NA SODIUM ION FORMUL 3 NA 2(NA 1+) FORMUL 5 HOH *318(H2 O) HELIX 1 AA1 ASN A 7 GLU A 29 1 23 HELIX 2 AA2 PRO A 30 VAL A 32 5 3 HELIX 3 AA3 THR A 37 VAL A 52 1 16 HELIX 4 AA4 ALA A 58 HIS A 63 1 6 HELIX 5 AA5 SER A 129 LYS A 148 1 20 HELIX 6 AA6 LEU A 156 ASN A 174 1 19 HELIX 7 AA7 ASN B 7 GLU B 29 1 23 HELIX 8 AA8 PRO B 30 VAL B 32 5 3 HELIX 9 AA9 THR B 37 VAL B 52 1 16 HELIX 10 AB1 ALA B 58 HIS B 63 1 6 HELIX 11 AB2 SER B 129 LYS B 148 1 20 HELIX 12 AB3 LEU B 156 ASN B 174 1 19 HELIX 13 AB4 PRO B 175 LYS B 178 5 4 SHEET 1 AA1 3 ILE A 56 PRO A 57 0 SHEET 2 AA1 3 ILE A 103 LYS A 112 -1 O ILE A 111 N ILE A 56 SHEET 3 AA1 3 CYS A 70 ILE A 73 -1 N SER A 72 O ASN A 105 SHEET 1 AA2 3 ILE A 56 PRO A 57 0 SHEET 2 AA2 3 ILE A 103 LYS A 112 -1 O ILE A 111 N ILE A 56 SHEET 3 AA2 3 TYR A 115 LEU A 124 -1 O PHE A 123 N LEU A 104 SHEET 1 AA3 3 ILE A 76 CYS A 78 0 SHEET 2 AA3 3 VAL A 240 THR A 242 -1 O VAL A 240 N VAL A 77 SHEET 3 AA3 3 CYS A 230 LEU A 232 -1 N ARG A 231 O TYR A 241 SHEET 1 AA4 2 THR A 87 PHE A 89 0 SHEET 2 AA4 2 ILE A 92 ARG A 94 -1 O ARG A 94 N THR A 87 SHEET 1 AA5 3 SER A 180 ILE A 181 0 SHEET 2 AA5 3 MET A 222 ASN A 224 -1 O ASN A 224 N SER A 180 SHEET 3 AA5 3 SER A 248 GLN A 250 -1 O ALA A 249 N ILE A 223 SHEET 1 AA6 2 GLY A 187 GLY A 189 0 SHEET 2 AA6 2 GLU A 196 VAL A 200 -1 O VAL A 200 N GLY A 187 SHEET 1 AA7 4 ILE A 216 ILE A 219 0 SHEET 2 AA7 4 HIS A 253 VAL A 257 -1 O ILE A 255 N PHE A 217 SHEET 3 AA7 4 GLY A 261 ILE A 264 -1 O GLU A 263 N LEU A 256 SHEET 4 AA7 4 ILE A 276 ASN A 278 -1 O LEU A 277 N CYS A 262 SHEET 1 AA8 3 ILE B 56 PRO B 57 0 SHEET 2 AA8 3 ILE B 103 LYS B 112 -1 O ILE B 111 N ILE B 56 SHEET 3 AA8 3 CYS B 70 ILE B 73 -1 N SER B 72 O ASN B 105 SHEET 1 AA9 3 ILE B 56 PRO B 57 0 SHEET 2 AA9 3 ILE B 103 LYS B 112 -1 O ILE B 111 N ILE B 56 SHEET 3 AA9 3 TYR B 115 LEU B 124 -1 O THR B 119 N ILE B 108 SHEET 1 AB1 3 ILE B 76 CYS B 78 0 SHEET 2 AB1 3 VAL B 240 THR B 242 -1 O VAL B 240 N VAL B 77 SHEET 3 AB1 3 CYS B 230 LEU B 232 -1 N ARG B 231 O TYR B 241 SHEET 1 AB2 2 THR B 87 PHE B 89 0 SHEET 2 AB2 2 ILE B 92 ARG B 94 -1 O ARG B 94 N THR B 87 SHEET 1 AB3 3 SER B 180 ILE B 181 0 SHEET 2 AB3 3 MET B 222 ASN B 224 -1 O ASN B 224 N SER B 180 SHEET 3 AB3 3 SER B 248 GLN B 250 -1 O ALA B 249 N ILE B 223 SHEET 1 AB4 2 GLY B 187 GLY B 189 0 SHEET 2 AB4 2 GLU B 196 VAL B 200 -1 O VAL B 200 N GLY B 187 SHEET 1 AB5 4 ILE B 216 ILE B 219 0 SHEET 2 AB5 4 HIS B 253 VAL B 257 -1 O ILE B 255 N PHE B 217 SHEET 3 AB5 4 GLY B 261 ILE B 264 -1 O GLU B 263 N LEU B 256 SHEET 4 AB5 4 ILE B 276 ASN B 278 -1 O LEU B 277 N CYS B 262 LINK O ASN A 74 NA NA A 301 1555 1555 2.32 LINK O ILE A 76 NA NA A 301 1555 1555 2.30 LINK O SER A 248 NA NA A 301 1555 1555 2.20 LINK NA NA A 301 O HOH A 493 1555 1555 2.16 LINK O ASN B 74 NA NA B 301 1555 1555 2.32 LINK O ILE B 76 NA NA B 301 1555 1555 2.34 LINK O SER B 248 NA NA B 301 1555 1555 2.22 LINK NA NA B 301 O HOH B 462 1555 1555 2.20 CISPEP 1 GLU A 197 PRO A 198 0 -3.26 CISPEP 2 GLU B 197 PRO B 198 0 -2.59 SITE 1 AC1 4 ASN A 74 ILE A 76 SER A 248 HOH A 493 SITE 1 AC2 4 ASN B 74 ILE B 76 SER B 248 HOH B 462 CRYST1 49.529 50.010 131.086 90.00 97.25 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020190 0.000000 0.002569 0.00000 SCALE2 0.000000 0.019996 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007690 0.00000