HEADER OXIDOREDUCTASE 15-MAY-19 6K30 TITLE BINDING POSE 2 OF 2-CF3 BOUND ASQJ COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON/ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ASQJ; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: 4'-METHOXYVIRIDICATIN/ASPOQUINOLONE BIOSYNTHESIS CLUSTER COMPND 5 PROTEIN ASQJ,ASPOQUINOLONE BIOSYNTHESIS PROTEIN J; COMPND 6 EC: 1.14.-.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS (STRAIN FGSC A4 / ATCC SOURCE 3 38163 / CBS 112.46 / NRRL 194 / M139); SOURCE 4 ORGANISM_TAXID: 227321; SOURCE 5 STRAIN: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139; SOURCE 6 GENE: ASQJ, AN9227; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS 2-CF3 BINDING, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.LIAO,N.L.CHAN REVDAT 2 27-MAR-24 6K30 1 REMARK REVDAT 1 18-MAR-20 6K30 0 JRNL AUTH H.J.LIAO,N.L.CHAN JRNL TITL BINDING POSE 2 OF 2-CF3 BOUND ASQJ COMPLEX JRNL REF J.AM.CHEM.SOC. 2020 JRNL REFN ESSN 1520-5126 REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 8413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.190 REMARK 3 FREE R VALUE TEST SET COUNT : 857 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6193 - 4.8717 1.00 1331 157 0.1367 0.1819 REMARK 3 2 4.8717 - 3.8695 1.00 1271 141 0.1238 0.2063 REMARK 3 3 3.8695 - 3.3812 1.00 1273 140 0.1724 0.2775 REMARK 3 4 3.3812 - 3.0724 1.00 1250 146 0.2023 0.3103 REMARK 3 5 3.0724 - 2.8524 1.00 1249 141 0.2451 0.3468 REMARK 3 6 2.8524 - 2.6843 0.96 1182 132 0.2651 0.3910 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2304 REMARK 3 ANGLE : 1.197 3145 REMARK 3 CHIRALITY : 0.064 369 REMARK 3 PLANARITY : 0.008 409 REMARK 3 DIHEDRAL : 7.965 1887 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2263 26.7828 -19.8091 REMARK 3 T TENSOR REMARK 3 T11: 0.2178 T22: 0.4680 REMARK 3 T33: 0.4564 T12: 0.0708 REMARK 3 T13: -0.0592 T23: 0.0914 REMARK 3 L TENSOR REMARK 3 L11: 4.8459 L22: 6.2580 REMARK 3 L33: 3.4521 L12: -1.6892 REMARK 3 L13: -0.3414 L23: 0.7122 REMARK 3 S TENSOR REMARK 3 S11: -0.1416 S12: 0.5107 S13: 0.0692 REMARK 3 S21: -0.4472 S22: -0.0753 S23: 1.0185 REMARK 3 S31: -0.2486 S32: -0.4644 S33: 0.1860 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0973 4.8994 -8.0130 REMARK 3 T TENSOR REMARK 3 T11: 0.4214 T22: 0.4798 REMARK 3 T33: 0.5468 T12: -0.0993 REMARK 3 T13: 0.0105 T23: 0.0557 REMARK 3 L TENSOR REMARK 3 L11: 9.2120 L22: 5.6343 REMARK 3 L33: 9.4837 L12: -6.9261 REMARK 3 L13: 7.9852 L23: -7.0035 REMARK 3 S TENSOR REMARK 3 S11: -0.0544 S12: -0.4392 S13: -1.1313 REMARK 3 S21: 0.1905 S22: 0.1563 S23: 0.3592 REMARK 3 S31: 0.3307 S32: -0.4077 S33: -0.1988 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1754 12.2131 3.5305 REMARK 3 T TENSOR REMARK 3 T11: 0.5096 T22: 0.5770 REMARK 3 T33: 0.2938 T12: -0.0141 REMARK 3 T13: -0.0017 T23: 0.1283 REMARK 3 L TENSOR REMARK 3 L11: 7.5317 L22: 1.8611 REMARK 3 L33: 8.3628 L12: -0.1202 REMARK 3 L13: 6.3402 L23: -1.1913 REMARK 3 S TENSOR REMARK 3 S11: -0.0364 S12: -1.4692 S13: -0.4938 REMARK 3 S21: 0.3584 S22: -0.1391 S23: 0.1306 REMARK 3 S31: 0.4983 S32: -0.3333 S33: 0.2400 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 81 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4618 5.8380 -16.0697 REMARK 3 T TENSOR REMARK 3 T11: 0.3125 T22: 0.4174 REMARK 3 T33: 0.3795 T12: -0.0483 REMARK 3 T13: -0.0024 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 3.3787 L22: 3.9387 REMARK 3 L33: 3.8078 L12: -1.1071 REMARK 3 L13: 0.0863 L23: -3.7145 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.1377 S13: -0.5421 REMARK 3 S21: -0.5001 S22: -0.1533 S23: 0.2873 REMARK 3 S31: 0.2814 S32: -0.4233 S33: -0.0029 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 98 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2383 18.7178 -19.6561 REMARK 3 T TENSOR REMARK 3 T11: 0.2589 T22: 0.4091 REMARK 3 T33: 0.2484 T12: 0.0981 REMARK 3 T13: 0.0123 T23: 0.0908 REMARK 3 L TENSOR REMARK 3 L11: 4.7199 L22: 4.0394 REMARK 3 L33: 0.2045 L12: 0.9531 REMARK 3 L13: 0.2155 L23: -0.1745 REMARK 3 S TENSOR REMARK 3 S11: -0.0866 S12: 0.4624 S13: 0.1116 REMARK 3 S21: -0.1329 S22: 0.1162 S23: 0.2130 REMARK 3 S31: -0.3247 S32: -0.2921 S33: -0.0237 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 125 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4625 26.2086 -8.4745 REMARK 3 T TENSOR REMARK 3 T11: 0.2876 T22: 0.2152 REMARK 3 T33: 0.2605 T12: 0.0350 REMARK 3 T13: -0.0295 T23: -0.0387 REMARK 3 L TENSOR REMARK 3 L11: 8.3765 L22: 0.8074 REMARK 3 L33: 2.5469 L12: -0.3205 REMARK 3 L13: -1.7547 L23: 1.1566 REMARK 3 S TENSOR REMARK 3 S11: 0.2665 S12: -0.5489 S13: 0.2591 REMARK 3 S21: -0.0280 S22: -0.0147 S23: 0.0495 REMARK 3 S31: 0.0840 S32: 0.2880 S33: -0.2641 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2943 26.4521 -5.9785 REMARK 3 T TENSOR REMARK 3 T11: 0.2245 T22: 0.3033 REMARK 3 T33: 0.2968 T12: 0.0528 REMARK 3 T13: -0.0230 T23: -0.0344 REMARK 3 L TENSOR REMARK 3 L11: 3.6718 L22: 4.3650 REMARK 3 L33: 6.6905 L12: -0.8274 REMARK 3 L13: -0.4978 L23: -0.1436 REMARK 3 S TENSOR REMARK 3 S11: 0.1213 S12: -0.4223 S13: 0.4059 REMARK 3 S21: 0.3326 S22: 0.0261 S23: 0.3281 REMARK 3 S31: -0.4216 S32: -0.4164 S33: -0.1119 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 233 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4267 6.7037 -19.0547 REMARK 3 T TENSOR REMARK 3 T11: 0.3229 T22: 0.3109 REMARK 3 T33: 0.3056 T12: 0.0339 REMARK 3 T13: 0.0804 T23: -0.0946 REMARK 3 L TENSOR REMARK 3 L11: 6.6354 L22: 4.6950 REMARK 3 L33: 4.7378 L12: 3.1358 REMARK 3 L13: 1.4343 L23: -2.2647 REMARK 3 S TENSOR REMARK 3 S11: -0.1576 S12: -0.0898 S13: -0.6394 REMARK 3 S21: -0.2558 S22: 0.0201 S23: -0.1043 REMARK 3 S31: 0.6401 S32: 0.1839 S33: 0.1041 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 261 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.6153 7.5472 -27.9327 REMARK 3 T TENSOR REMARK 3 T11: 0.3039 T22: 0.4281 REMARK 3 T33: 0.3439 T12: -0.0217 REMARK 3 T13: -0.0332 T23: -0.1396 REMARK 3 L TENSOR REMARK 3 L11: 5.4589 L22: 1.6256 REMARK 3 L33: 3.9228 L12: -0.3431 REMARK 3 L13: -1.8366 L23: -2.2574 REMARK 3 S TENSOR REMARK 3 S11: -0.2748 S12: 0.6167 S13: -0.4993 REMARK 3 S21: -0.1080 S22: 0.0914 S23: 0.1344 REMARK 3 S31: 0.3727 S32: 0.0443 S33: 0.1716 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K30 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1300012194. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-AUG-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8426 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.680 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2M POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE 0.1M TRIS, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.66800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.66800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.61200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.21700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.61200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.21700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 33.66800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.61200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.21700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 33.66800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.61200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 59.21700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 504 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 ASP B 5 REMARK 465 HIS B 6 REMARK 465 VAL B 7 REMARK 465 LYS B 8 REMARK 465 HIS B 296 REMARK 465 ASP B 297 REMARK 465 ASP B 298 REMARK 465 GLU B 299 REMARK 465 ALA B 300 REMARK 465 GLU B 301 REMARK 465 PRO B 302 REMARK 465 LEU B 303 REMARK 465 CYS B 304 REMARK 465 ARG B 305 REMARK 465 GLU B 306 REMARK 465 THR B 307 REMARK 465 ILE B 308 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE B 175 OG SER B 178 2.12 REMARK 500 O TYR B 114 NH1 ARG B 258 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 59 C - N - CD ANGL. DEV. = -14.3 DEGREES REMARK 500 ASP B 136 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 62 34.85 -99.22 REMARK 500 ASP B 93 -70.52 -76.40 REMARK 500 MET B 137 -4.76 77.30 REMARK 500 SER B 140 -32.18 -137.13 REMARK 500 LEU B 184 45.99 -97.91 REMARK 500 TRP B 262 40.26 -104.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 134 NE2 REMARK 620 2 ASP B 136 OD1 104.3 REMARK 620 3 HIS B 211 NE2 90.5 91.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CV3 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SIN B 403 DBREF 6K30 B 1 308 UNP Q5AR53 ASQJ_EMENI 109 416 SEQADV 6K30 MET B -18 UNP Q5AR53 INITIATING METHIONINE SEQADV 6K30 GLY B -17 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 SER B -16 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 SER B -15 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 HIS B -14 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 HIS B -13 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 HIS B -12 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 HIS B -11 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 HIS B -10 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 HIS B -9 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 SER B -8 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 GLY B -7 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 LEU B -6 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 VAL B -5 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 PRO B -4 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 ARG B -3 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 GLY B -2 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 SER B -1 UNP Q5AR53 EXPRESSION TAG SEQADV 6K30 HIS B 0 UNP Q5AR53 EXPRESSION TAG SEQRES 1 B 327 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLY LEU SEQRES 2 B 327 VAL PRO ARG GLY SER HIS MET THR SER LYS ASP HIS VAL SEQRES 3 B 327 LYS SER GLN ILE PRO ARG LEU SER ALA ILE ASN ASP LEU SEQRES 4 B 327 HIS LYS ILE TRP PRO THR VAL GLU GLU HIS GLY ALA ALA SEQRES 5 B 327 ILE ILE GLU SER PHE LEU SER LEU ASP ILE VAL ARG ARG SEQRES 6 B 327 LEU ASN GLU GLU VAL ASP PRO PHE VAL LYS ILE GLU PRO SEQRES 7 B 327 ILE PRO ALA ALA LYS THR LYS ASP HIS PRO ASN HIS VAL SEQRES 8 B 327 LEU SER THR THR THR ARG LEU VAL ASN VAL LEU ALA PRO SEQRES 9 B 327 ILE SER LYS ALA TYR ARG GLU ASP VAL LEU ASN SER LYS SEQRES 10 B 327 VAL LEU HIS ARG ILE CYS SER ASP ALA PHE HIS VAL TYR SEQRES 11 B 327 GLY ASP TYR TRP VAL LEU MET GLY ALA VAL MET GLU LEU SEQRES 12 B 327 ALA PRO SER ASN PRO ALA GLN PRO LEU HIS ARG ASP MET SEQRES 13 B 327 ARG PHE SER HIS PRO ILE VAL GLU TYR LEU LYS PRO ASP SEQRES 14 B 327 ALA PRO ALA THR SER ILE ASN PHE LEU VAL ALA LEU SER SEQRES 15 B 327 PRO PHE THR ALA GLU ASN GLY ALA THR HIS VAL ILE LEU SEQRES 16 B 327 GLY SER HIS LYS TRP GLN ASN LEU SER ASN VAL SER MET SEQRES 17 B 327 ASP ALA THR VAL ARG ALA LEU MET ASN PRO GLY ASP ALA SEQRES 18 B 327 LEU LEU ILE THR ASP SER THR ILE HIS CYS GLY GLY ALA SEQRES 19 B 327 GLU THR THR GLY THR GLU THR ARG ARG LEU LEU THR ILE SEQRES 20 B 327 THR MET GLY ILE SER GLN LEU THR PRO LEU GLU SER ASN SEQRES 21 B 327 LEU ALA VAL PRO ARG PRO VAL ILE GLU SER LEU THR PRO SEQRES 22 B 327 LEU ALA GLN ARG LEU LEU GLY TRP ALA SER GLN ARG SER SEQRES 23 B 327 ALA ALA PRO ARG ASP ILE GLY LEU LEU THR ILE ARG GLY SEQRES 24 B 327 ASN SER ILE GLU LYS THR MET ASN LEU LYS ALA GLU GLN SEQRES 25 B 327 PRO LEU HIS ASP ASP GLU ALA GLU PRO LEU CYS ARG GLU SEQRES 26 B 327 THR ILE HET FE B 401 1 HET CV3 B 402 38 HET SIN B 403 12 HETNAM FE FE (III) ION HETNAM CV3 (3~{Z})-4-METHYL-3-[[4-(TRIFLUOROMETHYL) HETNAM 2 CV3 PHENYL]METHYLIDENE]-1~{H}-1,4-BENZODIAZEPINE-2,5-DIONE HETNAM SIN SUCCINIC ACID FORMUL 2 FE FE 3+ FORMUL 3 CV3 C18 H13 F3 N2 O2 FORMUL 4 SIN C4 H6 O4 FORMUL 5 HOH *13(H2 O) HELIX 1 AA1 ASP B 19 HIS B 21 5 3 HELIX 2 AA2 LYS B 22 GLY B 31 1 10 HELIX 3 AA3 SER B 40 GLU B 58 1 19 HELIX 4 AA4 SER B 87 GLU B 92 1 6 HELIX 5 AA5 ASP B 93 ASN B 96 5 4 HELIX 6 AA6 SER B 97 PHE B 108 1 12 HELIX 7 AA7 HIS B 141 LEU B 147 5 7 HELIX 8 AA8 GLY B 177 TRP B 181 5 5 HELIX 9 AA9 SER B 188 THR B 192 5 5 HELIX 10 AB1 PRO B 245 SER B 251 1 7 HELIX 11 AB2 THR B 253 LEU B 260 1 8 HELIX 12 AB3 SER B 282 MET B 287 1 6 SHEET 1 AA1 7 ARG B 13 SER B 15 0 SHEET 2 AA1 7 ALA B 32 GLU B 36 1 O ILE B 34 N LEU B 14 SHEET 3 AA1 7 ALA B 202 THR B 206 -1 O ALA B 202 N ILE B 35 SHEET 4 AA1 7 SER B 155 ALA B 161 -1 N ASN B 157 O ILE B 205 SHEET 5 AA1 7 ARG B 223 ILE B 232 -1 O LEU B 226 N VAL B 160 SHEET 6 AA1 7 TYR B 114 LEU B 124 -1 N LEU B 124 O ARG B 223 SHEET 7 AA1 7 THR B 77 VAL B 80 -1 N VAL B 80 O VAL B 121 SHEET 1 AA2 3 VAL B 193 ARG B 194 0 SHEET 2 AA2 3 HIS B 173 VAL B 174 -1 N VAL B 174 O VAL B 193 SHEET 3 AA2 3 HIS B 211 CYS B 212 -1 O CYS B 212 N HIS B 173 LINK NE2 HIS B 134 FE FE B 401 1555 1555 2.22 LINK OD1 ASP B 136 FE FE B 401 1555 1555 2.25 LINK NE2 HIS B 211 FE FE B 401 1555 1555 2.23 SITE 1 AC1 4 HIS B 134 ASP B 136 HIS B 211 SIN B 403 SITE 1 AC2 11 ASN B 70 VAL B 72 LEU B 73 MET B 118 SITE 2 AC2 11 GLN B 131 HIS B 134 ASP B 136 MET B 137 SITE 3 AC2 11 PHE B 139 SIN B 403 HOH B 509 SITE 1 AC3 6 GLN B 131 THR B 172 GLY B 213 ARG B 223 SITE 2 AC3 6 FE B 401 CV3 B 402 CRYST1 73.224 118.434 67.336 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013657 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008444 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014851 0.00000