data_6K3K # _entry.id 6K3K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6K3K pdb_00006k3k 10.2210/pdb6k3k/pdb WWPDB D_1300011683 ? ? BMRB 36193 ? 10.13018/BMR36193 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-12 2 'Structure model' 1 1 2019-07-17 3 'Structure model' 1 2 2023-06-14 4 'Structure model' 1 3 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_nmr_spectrometer 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_conn_type 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 8 3 'Structure model' '_struct_conn.conn_type_id' 9 3 'Structure model' '_struct_conn.id' 10 3 'Structure model' '_struct_conn.pdbx_dist_value' 11 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 13 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 14 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 21 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 24 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 26 3 'Structure model' '_struct_conn_type.id' 27 4 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6K3K _pdbx_database_status.recvd_initial_deposition_date 2019-05-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 36193 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cao, C.' 1 ? 'Yan, X.' 2 ? 'Lan, W.' 3 ? 'Wang, C.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country DE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Chem Asian J' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1861-471X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 2235 _citation.page_last 2241 _citation.title 'Structural Investigations on the Interactions between Cytidine Deaminase Human APOBEC3G and DNA.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/asia.201900480 _citation.pdbx_database_id_PubMed 31116511 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yan, X.' 1 ? primary 'Lan, W.' 2 ? primary 'Wang, C.' 3 ? primary 'Cao, C.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA dC->dU-editing enzyme APOBEC-3G' 22161.982 1 3.5.4.- ? ? ? 2 polymer syn ;DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3') ; 3105.862 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'APOBEC-related cytidine deaminase,ARCD,APOBEC-related protein 9,ARP-9,CEM-15,CEM15,Deoxycytidine deaminase,A3G' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQD YRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIYDDQGRCQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGC PFQPWDGLDEHSQDLSGRLRAILQNQEN ; ;MDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQD YRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIYDDQGRCQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGC PFQPWDGLDEHSQDLSGRLRAILQNQEN ; A ? 2 'polydeoxyribonucleotide/polyribonucleotide hybrid' no yes '(DA)(DT)(DT)(DC)(DU)(C38)(DA)(DA)(DT)(DT)' ATTCUCAATT B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 PRO n 1 4 PRO n 1 5 THR n 1 6 PHE n 1 7 THR n 1 8 PHE n 1 9 ASN n 1 10 PHE n 1 11 ASN n 1 12 ASN n 1 13 GLU n 1 14 PRO n 1 15 TRP n 1 16 VAL n 1 17 ARG n 1 18 GLY n 1 19 ARG n 1 20 HIS n 1 21 GLU n 1 22 THR n 1 23 TYR n 1 24 LEU n 1 25 CYS n 1 26 TYR n 1 27 GLU n 1 28 VAL n 1 29 GLU n 1 30 ARG n 1 31 MET n 1 32 HIS n 1 33 ASN n 1 34 ASP n 1 35 THR n 1 36 TRP n 1 37 VAL n 1 38 LEU n 1 39 LEU n 1 40 ASN n 1 41 GLN n 1 42 ARG n 1 43 ARG n 1 44 GLY n 1 45 PHE n 1 46 LEU n 1 47 CYS n 1 48 ASN n 1 49 GLN n 1 50 ALA n 1 51 PRO n 1 52 HIS n 1 53 LYS n 1 54 HIS n 1 55 GLY n 1 56 PHE n 1 57 LEU n 1 58 GLU n 1 59 GLY n 1 60 ARG n 1 61 HIS n 1 62 ALA n 1 63 GLU n 1 64 LEU n 1 65 CYS n 1 66 PHE n 1 67 LEU n 1 68 ASP n 1 69 VAL n 1 70 ILE n 1 71 PRO n 1 72 PHE n 1 73 TRP n 1 74 LYS n 1 75 LEU n 1 76 ASP n 1 77 LEU n 1 78 ASP n 1 79 GLN n 1 80 ASP n 1 81 TYR n 1 82 ARG n 1 83 VAL n 1 84 THR n 1 85 CYS n 1 86 PHE n 1 87 THR n 1 88 SER n 1 89 TRP n 1 90 SER n 1 91 PRO n 1 92 CYS n 1 93 PHE n 1 94 SER n 1 95 CYS n 1 96 ALA n 1 97 GLN n 1 98 GLU n 1 99 MET n 1 100 ALA n 1 101 LYS n 1 102 PHE n 1 103 ILE n 1 104 SER n 1 105 LYS n 1 106 ASN n 1 107 LYS n 1 108 HIS n 1 109 VAL n 1 110 SER n 1 111 LEU n 1 112 CYS n 1 113 ILE n 1 114 PHE n 1 115 THR n 1 116 ALA n 1 117 ARG n 1 118 ILE n 1 119 TYR n 1 120 ASP n 1 121 ASP n 1 122 GLN n 1 123 GLY n 1 124 ARG n 1 125 CYS n 1 126 GLN n 1 127 GLU n 1 128 GLY n 1 129 LEU n 1 130 ARG n 1 131 THR n 1 132 LEU n 1 133 ALA n 1 134 GLU n 1 135 ALA n 1 136 GLY n 1 137 ALA n 1 138 LYS n 1 139 ILE n 1 140 SER n 1 141 ILE n 1 142 MET n 1 143 THR n 1 144 TYR n 1 145 SER n 1 146 GLU n 1 147 PHE n 1 148 LYS n 1 149 HIS n 1 150 CYS n 1 151 TRP n 1 152 ASP n 1 153 THR n 1 154 PHE n 1 155 VAL n 1 156 ASP n 1 157 HIS n 1 158 GLN n 1 159 GLY n 1 160 CYS n 1 161 PRO n 1 162 PHE n 1 163 GLN n 1 164 PRO n 1 165 TRP n 1 166 ASP n 1 167 GLY n 1 168 LEU n 1 169 ASP n 1 170 GLU n 1 171 HIS n 1 172 SER n 1 173 GLN n 1 174 ASP n 1 175 LEU n 1 176 SER n 1 177 GLY n 1 178 ARG n 1 179 LEU n 1 180 ARG n 1 181 ALA n 1 182 ILE n 1 183 LEU n 1 184 GLN n 1 185 ASN n 1 186 GLN n 1 187 GLU n 1 188 ASN n 2 1 DA n 2 2 DT n 2 3 DT n 2 4 DC n 2 5 DU n 2 6 C38 n 2 7 DA n 2 8 DA n 2 9 DT n 2 10 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 188 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene APOBEC3G _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C38 'DNA linking' n "5-IODO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 I N3 O7 P' 433.094 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DU 'DNA linking' y "2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O8 P' 308.182 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 197 197 MET MET A . n A 1 2 ASP 2 198 198 ASP ASP A . n A 1 3 PRO 3 199 199 PRO PRO A . n A 1 4 PRO 4 200 200 PRO PRO A . n A 1 5 THR 5 201 201 THR THR A . n A 1 6 PHE 6 202 202 PHE PHE A . n A 1 7 THR 7 203 203 THR THR A . n A 1 8 PHE 8 204 204 PHE PHE A . n A 1 9 ASN 9 205 205 ASN ASN A . n A 1 10 PHE 10 206 206 PHE PHE A . n A 1 11 ASN 11 207 207 ASN ASN A . n A 1 12 ASN 12 208 208 ASN ASN A . n A 1 13 GLU 13 209 209 GLU GLU A . n A 1 14 PRO 14 210 210 PRO PRO A . n A 1 15 TRP 15 211 211 TRP TRP A . n A 1 16 VAL 16 212 212 VAL VAL A . n A 1 17 ARG 17 213 213 ARG ARG A . n A 1 18 GLY 18 214 214 GLY GLY A . n A 1 19 ARG 19 215 215 ARG ARG A . n A 1 20 HIS 20 216 216 HIS HIS A . n A 1 21 GLU 21 217 217 GLU GLU A . n A 1 22 THR 22 218 218 THR THR A . n A 1 23 TYR 23 219 219 TYR TYR A . n A 1 24 LEU 24 220 220 LEU LEU A . n A 1 25 CYS 25 221 221 CYS CYS A . n A 1 26 TYR 26 222 222 TYR TYR A . n A 1 27 GLU 27 223 223 GLU GLU A . n A 1 28 VAL 28 224 224 VAL VAL A . n A 1 29 GLU 29 225 225 GLU GLU A . n A 1 30 ARG 30 226 226 ARG ARG A . n A 1 31 MET 31 227 227 MET MET A . n A 1 32 HIS 32 228 228 HIS HIS A . n A 1 33 ASN 33 229 229 ASN ASN A . n A 1 34 ASP 34 230 230 ASP ASP A . n A 1 35 THR 35 231 231 THR THR A . n A 1 36 TRP 36 232 232 TRP TRP A . n A 1 37 VAL 37 233 233 VAL VAL A . n A 1 38 LEU 38 234 234 LEU LEU A . n A 1 39 LEU 39 235 235 LEU LEU A . n A 1 40 ASN 40 236 236 ASN ASN A . n A 1 41 GLN 41 237 237 GLN GLN A . n A 1 42 ARG 42 238 238 ARG ARG A . n A 1 43 ARG 43 239 239 ARG ARG A . n A 1 44 GLY 44 240 240 GLY GLY A . n A 1 45 PHE 45 241 241 PHE PHE A . n A 1 46 LEU 46 242 242 LEU LEU A . n A 1 47 CYS 47 243 243 CYS CYS A . n A 1 48 ASN 48 244 244 ASN ASN A . n A 1 49 GLN 49 245 245 GLN GLN A . n A 1 50 ALA 50 246 246 ALA ALA A . n A 1 51 PRO 51 247 247 PRO PRO A . n A 1 52 HIS 52 248 248 HIS HIS A . n A 1 53 LYS 53 249 249 LYS LYS A . n A 1 54 HIS 54 250 250 HIS HIS A . n A 1 55 GLY 55 251 251 GLY GLY A . n A 1 56 PHE 56 252 252 PHE PHE A . n A 1 57 LEU 57 253 253 LEU LEU A . n A 1 58 GLU 58 254 254 GLU GLU A . n A 1 59 GLY 59 255 255 GLY GLY A . n A 1 60 ARG 60 256 256 ARG ARG A . n A 1 61 HIS 61 257 257 HIS HIS A . n A 1 62 ALA 62 258 258 ALA ALA A . n A 1 63 GLU 63 259 259 GLU GLU A . n A 1 64 LEU 64 260 260 LEU LEU A . n A 1 65 CYS 65 261 261 CYS CYS A . n A 1 66 PHE 66 262 262 PHE PHE A . n A 1 67 LEU 67 263 263 LEU LEU A . n A 1 68 ASP 68 264 264 ASP ASP A . n A 1 69 VAL 69 265 265 VAL VAL A . n A 1 70 ILE 70 266 266 ILE ILE A . n A 1 71 PRO 71 267 267 PRO PRO A . n A 1 72 PHE 72 268 268 PHE PHE A . n A 1 73 TRP 73 269 269 TRP TRP A . n A 1 74 LYS 74 270 270 LYS LYS A . n A 1 75 LEU 75 271 271 LEU LEU A . n A 1 76 ASP 76 272 272 ASP ASP A . n A 1 77 LEU 77 273 273 LEU LEU A . n A 1 78 ASP 78 274 274 ASP ASP A . n A 1 79 GLN 79 275 275 GLN GLN A . n A 1 80 ASP 80 276 276 ASP ASP A . n A 1 81 TYR 81 277 277 TYR TYR A . n A 1 82 ARG 82 278 278 ARG ARG A . n A 1 83 VAL 83 279 279 VAL VAL A . n A 1 84 THR 84 280 280 THR THR A . n A 1 85 CYS 85 281 281 CYS CYS A . n A 1 86 PHE 86 282 282 PHE PHE A . n A 1 87 THR 87 283 283 THR THR A . n A 1 88 SER 88 284 284 SER SER A . n A 1 89 TRP 89 285 285 TRP TRP A . n A 1 90 SER 90 286 286 SER SER A . n A 1 91 PRO 91 287 287 PRO PRO A . n A 1 92 CYS 92 288 288 CYS CYS A . n A 1 93 PHE 93 289 289 PHE PHE A . n A 1 94 SER 94 290 290 SER SER A . n A 1 95 CYS 95 291 291 CYS CYS A . n A 1 96 ALA 96 292 292 ALA ALA A . n A 1 97 GLN 97 293 293 GLN GLN A . n A 1 98 GLU 98 294 294 GLU GLU A . n A 1 99 MET 99 295 295 MET MET A . n A 1 100 ALA 100 296 296 ALA ALA A . n A 1 101 LYS 101 297 297 LYS LYS A . n A 1 102 PHE 102 298 298 PHE PHE A . n A 1 103 ILE 103 299 299 ILE ILE A . n A 1 104 SER 104 300 300 SER SER A . n A 1 105 LYS 105 301 301 LYS LYS A . n A 1 106 ASN 106 302 302 ASN ASN A . n A 1 107 LYS 107 303 303 LYS LYS A . n A 1 108 HIS 108 304 304 HIS HIS A . n A 1 109 VAL 109 305 305 VAL VAL A . n A 1 110 SER 110 306 306 SER SER A . n A 1 111 LEU 111 307 307 LEU LEU A . n A 1 112 CYS 112 308 308 CYS CYS A . n A 1 113 ILE 113 309 309 ILE ILE A . n A 1 114 PHE 114 310 310 PHE PHE A . n A 1 115 THR 115 311 311 THR THR A . n A 1 116 ALA 116 312 312 ALA ALA A . n A 1 117 ARG 117 313 313 ARG ARG A . n A 1 118 ILE 118 314 314 ILE ILE A . n A 1 119 TYR 119 315 315 TYR TYR A . n A 1 120 ASP 120 316 316 ASP ASP A . n A 1 121 ASP 121 317 317 ASP ASP A . n A 1 122 GLN 122 318 318 GLN GLN A . n A 1 123 GLY 123 319 319 GLY GLY A . n A 1 124 ARG 124 320 320 ARG ARG A . n A 1 125 CYS 125 321 321 CYS CYS A . n A 1 126 GLN 126 322 322 GLN GLN A . n A 1 127 GLU 127 323 323 GLU GLU A . n A 1 128 GLY 128 324 324 GLY GLY A . n A 1 129 LEU 129 325 325 LEU LEU A . n A 1 130 ARG 130 326 326 ARG ARG A . n A 1 131 THR 131 327 327 THR THR A . n A 1 132 LEU 132 328 328 LEU LEU A . n A 1 133 ALA 133 329 329 ALA ALA A . n A 1 134 GLU 134 330 330 GLU GLU A . n A 1 135 ALA 135 331 331 ALA ALA A . n A 1 136 GLY 136 332 332 GLY GLY A . n A 1 137 ALA 137 333 333 ALA ALA A . n A 1 138 LYS 138 334 334 LYS LYS A . n A 1 139 ILE 139 335 335 ILE ILE A . n A 1 140 SER 140 336 336 SER SER A . n A 1 141 ILE 141 337 337 ILE ILE A . n A 1 142 MET 142 338 338 MET MET A . n A 1 143 THR 143 339 339 THR THR A . n A 1 144 TYR 144 340 340 TYR TYR A . n A 1 145 SER 145 341 341 SER SER A . n A 1 146 GLU 146 342 342 GLU GLU A . n A 1 147 PHE 147 343 343 PHE PHE A . n A 1 148 LYS 148 344 344 LYS LYS A . n A 1 149 HIS 149 345 345 HIS HIS A . n A 1 150 CYS 150 346 346 CYS CYS A . n A 1 151 TRP 151 347 347 TRP TRP A . n A 1 152 ASP 152 348 348 ASP ASP A . n A 1 153 THR 153 349 349 THR THR A . n A 1 154 PHE 154 350 350 PHE PHE A . n A 1 155 VAL 155 351 351 VAL VAL A . n A 1 156 ASP 156 352 352 ASP ASP A . n A 1 157 HIS 157 353 353 HIS HIS A . n A 1 158 GLN 158 354 354 GLN GLN A . n A 1 159 GLY 159 355 355 GLY GLY A . n A 1 160 CYS 160 356 356 CYS CYS A . n A 1 161 PRO 161 357 357 PRO PRO A . n A 1 162 PHE 162 358 358 PHE PHE A . n A 1 163 GLN 163 359 359 GLN GLN A . n A 1 164 PRO 164 360 360 PRO PRO A . n A 1 165 TRP 165 361 361 TRP TRP A . n A 1 166 ASP 166 362 362 ASP ASP A . n A 1 167 GLY 167 363 363 GLY GLY A . n A 1 168 LEU 168 364 364 LEU LEU A . n A 1 169 ASP 169 365 365 ASP ASP A . n A 1 170 GLU 170 366 366 GLU GLU A . n A 1 171 HIS 171 367 367 HIS HIS A . n A 1 172 SER 172 368 368 SER SER A . n A 1 173 GLN 173 369 369 GLN GLN A . n A 1 174 ASP 174 370 370 ASP ASP A . n A 1 175 LEU 175 371 371 LEU LEU A . n A 1 176 SER 176 372 372 SER SER A . n A 1 177 GLY 177 373 373 GLY GLY A . n A 1 178 ARG 178 374 374 ARG ARG A . n A 1 179 LEU 179 375 375 LEU LEU A . n A 1 180 ARG 180 376 376 ARG ARG A . n A 1 181 ALA 181 377 377 ALA ALA A . n A 1 182 ILE 182 378 378 ILE ILE A . n A 1 183 LEU 183 379 379 LEU LEU A . n A 1 184 GLN 184 380 380 GLN GLN A . n A 1 185 ASN 185 381 381 ASN ASN A . n A 1 186 GLN 186 382 382 GLN GLN A . n A 1 187 GLU 187 383 383 GLU GLU A . n A 1 188 ASN 188 384 384 ASN ASN A . n B 2 1 DA 1 385 385 DA DA B . n B 2 2 DT 2 386 386 DT DT B . n B 2 3 DT 3 387 387 DT DT B . n B 2 4 DC 4 388 388 DC DC B . n B 2 5 DU 5 389 389 DU DU B . n B 2 6 C38 6 390 390 C38 ICY B . n B 2 7 DA 7 391 391 DA DA B . n B 2 8 DA 8 392 392 DA DA B . n B 2 9 DT 9 393 393 DT DT B . n B 2 10 DT 10 394 394 DT DT B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 395 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6K3K _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6K3K _struct.title 'Solution structure of APOBEC3G-CD2 with ssDNA, Product B' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6K3K _struct_keywords.text 'APOBEC3G, DNA cytidine deaminase complex with DNA, HYDROLASE-DNA complex' _struct_keywords.pdbx_keywords HYDROLASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP ABC3G_HUMAN Q9HC16 ? 1 ;MDPPTFTFNFNNEPWVRGRHETYLCYEVERMHNDTWVLLNQRRGFLCNQAPHKHGFLEGRHAELCFLDVIPFWKLDLDQD YRVTCFTSWSPCFSCAQEMAKFISKNKHVSLCIFTARIYDDQGRCQEGLRTLAEAGAKISIMTYSEFKHCWDTFVDHQGC PFQPWDGLDEHSQDLSGRLRAILQNQEN ; 197 2 PDB 6K3K 6K3K ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6K3K A 1 ? 188 ? Q9HC16 197 ? 384 ? 197 384 2 2 6K3K B 1 ? 10 ? 6K3K 385 ? 394 ? 385 394 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2560 ? 1 MORE -52 ? 1 'SSA (A^2)' 13410 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 4 ? ASN A 11 ? PRO A 200 ASN A 207 1 ? 8 HELX_P HELX_P2 AA2 ASN A 12 ? VAL A 16 ? ASN A 208 VAL A 212 5 ? 5 HELX_P HELX_P3 AA3 LEU A 38 ? ARG A 42 ? LEU A 234 ARG A 238 5 ? 5 HELX_P HELX_P4 AA4 HIS A 61 ? TRP A 73 ? HIS A 257 TRP A 269 1 ? 13 HELX_P HELX_P5 AA5 CYS A 92 ? ASN A 106 ? CYS A 288 ASN A 302 1 ? 15 HELX_P HELX_P6 AA6 CYS A 125 ? GLY A 136 ? CYS A 321 GLY A 332 1 ? 12 HELX_P HELX_P7 AA7 THR A 143 ? VAL A 155 ? THR A 339 VAL A 351 1 ? 13 HELX_P HELX_P8 AA8 ASP A 166 ? ASN A 185 ? ASP A 362 ASN A 381 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DU 5 "O3'" ? ? ? 1_555 B C38 6 P ? ? B DU 389 B C38 390 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale2 covale one ? B C38 6 "O3'" ? ? ? 1_555 B DA 7 P ? ? B C38 390 B DA 391 1_555 ? ? ? ? ? ? ? 1.602 ? ? metalc1 metalc ? ? A HIS 61 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 257 A ZN 401 1_555 ? ? ? ? ? ? ? 2.008 ? ? metalc2 metalc ? ? A CYS 92 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 288 A ZN 401 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc3 metalc ? ? A CYS 95 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 291 A ZN 401 1_555 ? ? ? ? ? ? ? 2.301 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 61 ? A HIS 257 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 92 ? A CYS 288 ? 1_555 114.8 ? 2 ND1 ? A HIS 61 ? A HIS 257 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 95 ? A CYS 291 ? 1_555 111.8 ? 3 SG ? A CYS 92 ? A CYS 288 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 95 ? A CYS 291 ? 1_555 107.7 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 36 ? VAL A 37 ? TRP A 232 VAL A 233 AA1 2 LEU A 24 ? MET A 31 ? LEU A 220 MET A 227 AA1 3 GLY A 44 ? LEU A 46 ? GLY A 240 LEU A 242 AA2 1 TRP A 36 ? VAL A 37 ? TRP A 232 VAL A 233 AA2 2 LEU A 24 ? MET A 31 ? LEU A 220 MET A 227 AA2 3 ASP A 80 ? THR A 87 ? ASP A 276 THR A 283 AA2 4 VAL A 109 ? THR A 115 ? VAL A 305 THR A 311 AA2 5 LYS A 138 ? ILE A 141 ? LYS A 334 ILE A 337 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 37 ? O VAL A 233 N ARG A 30 ? N ARG A 226 AA1 2 3 N LEU A 24 ? N LEU A 220 O LEU A 46 ? O LEU A 242 AA2 1 2 O VAL A 37 ? O VAL A 233 N ARG A 30 ? N ARG A 226 AA2 2 3 N CYS A 25 ? N CYS A 221 O PHE A 86 ? O PHE A 282 AA2 3 4 N TYR A 81 ? N TYR A 277 O SER A 110 ? O SER A 306 AA2 4 5 N ILE A 113 ? N ILE A 309 O LYS A 138 ? O LYS A 334 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'binding site for residue ZN A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 61 ? HIS A 257 . ? 1_555 ? 2 AC1 3 CYS A 92 ? CYS A 288 . ? 1_555 ? 3 AC1 3 CYS A 95 ? CYS A 291 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A TRP 211 ? ? H A ARG 213 ? ? 1.57 2 1 O A ARG 376 ? ? H A GLN 380 ? ? 1.60 3 2 HE21 A GLN 293 ? ? HZ3 A LYS 297 ? ? 1.31 4 2 O A TRP 211 ? ? H A ARG 213 ? ? 1.56 5 3 O A TRP 211 ? ? H A ARG 213 ? ? 1.60 6 4 O A TRP 211 ? ? H A ARG 213 ? ? 1.60 7 6 O A TRP 211 ? ? H A ARG 213 ? ? 1.58 8 7 H A ASP 198 ? ? HG1 A THR 201 ? ? 1.30 9 7 O A TRP 211 ? ? H A ARG 213 ? ? 1.59 10 9 H A ASP 198 ? ? HG1 A THR 201 ? ? 1.26 11 9 O A TRP 211 ? ? H A ARG 213 ? ? 1.56 12 9 O A PRO 247 ? ? HD1 A HIS 250 ? ? 1.60 13 10 HE A ARG 226 ? ? HE2 A HIS 228 ? ? 1.23 14 11 HE A ARG 226 ? ? HE2 A HIS 228 ? ? 1.21 15 11 H A ASP 198 ? ? HG1 A THR 201 ? ? 1.27 16 12 HE A ARG 256 ? ? HG A CYS 261 ? ? 1.34 17 12 O A PRO 247 ? ? HD1 A HIS 250 ? ? 1.57 18 12 O A CYS 291 ? ? H A MET 295 ? ? 1.58 19 13 O A TRP 211 ? ? H A ARG 213 ? ? 1.57 20 14 H A ASP 198 ? ? HG1 A THR 201 ? ? 1.24 21 14 O A CYS 291 ? ? H A MET 295 ? ? 1.60 22 15 O A TRP 211 ? ? H A ARG 213 ? ? 1.59 23 16 HE2 A HIS 216 ? ? HD22 A ASN 244 ? ? 1.34 24 16 O A TRP 211 ? ? H A ARG 213 ? ? 1.59 25 17 O A TRP 211 ? ? H A ARG 213 ? ? 1.58 26 17 O A PRO 247 ? ? HD1 A HIS 250 ? ? 1.58 27 18 O A TRP 211 ? ? H A ARG 213 ? ? 1.57 28 19 O A TRP 211 ? ? H A ARG 213 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 207 ? ? -78.91 21.69 2 1 TRP A 211 ? ? -55.97 -9.15 3 1 VAL A 212 ? ? -66.82 62.72 4 1 ARG A 320 ? ? 58.70 -4.47 5 1 ALA A 333 ? ? 58.47 176.14 6 1 ASP A 362 ? ? -91.52 30.41 7 1 GLN A 382 ? ? -56.74 97.83 8 2 ASN A 207 ? ? -77.35 21.29 9 2 TRP A 211 ? ? -58.73 -8.74 10 2 VAL A 212 ? ? -63.37 66.01 11 2 ARG A 320 ? ? 61.81 -12.60 12 2 ALA A 333 ? ? 59.11 176.24 13 2 ASP A 362 ? ? -94.15 30.22 14 2 GLN A 382 ? ? -59.97 98.00 15 3 ASN A 207 ? ? -79.55 23.10 16 3 TRP A 211 ? ? -59.57 -8.39 17 3 VAL A 212 ? ? -63.20 68.85 18 3 ARG A 320 ? ? -176.43 -49.36 19 3 CYS A 321 ? ? -71.48 27.72 20 3 ALA A 333 ? ? 58.13 176.46 21 3 ASP A 362 ? ? -90.67 30.46 22 3 GLN A 382 ? ? -56.21 97.90 23 4 TRP A 211 ? ? -55.95 -9.45 24 4 VAL A 212 ? ? -68.51 62.47 25 4 GLN A 237 ? ? -80.03 39.15 26 4 ARG A 238 ? ? -92.91 32.03 27 4 ARG A 320 ? ? 59.32 -10.22 28 4 CYS A 321 ? ? -81.89 33.73 29 4 ALA A 333 ? ? 58.47 176.76 30 4 ASP A 352 ? ? -69.17 92.64 31 4 ASP A 362 ? ? -87.30 30.89 32 4 GLN A 382 ? ? -52.78 98.03 33 5 PRO A 199 ? ? -33.70 153.89 34 5 PRO A 200 ? ? -23.83 69.94 35 5 ASN A 208 ? ? -66.71 29.67 36 5 TRP A 211 ? ? -59.15 -9.88 37 5 VAL A 212 ? ? -69.00 62.30 38 5 ARG A 320 ? ? 47.30 9.89 39 5 CYS A 321 ? ? -96.88 30.40 40 5 ALA A 333 ? ? 58.26 176.76 41 5 ASP A 362 ? ? -91.81 30.24 42 5 GLN A 382 ? ? -56.70 97.64 43 6 TRP A 211 ? ? -56.02 -9.67 44 6 VAL A 212 ? ? -66.50 62.53 45 6 ARG A 320 ? ? 54.23 2.93 46 6 ALA A 333 ? ? 58.39 176.40 47 6 ASP A 362 ? ? -88.29 30.86 48 6 GLN A 382 ? ? -48.39 97.83 49 7 TRP A 211 ? ? -57.08 -9.42 50 7 VAL A 212 ? ? -66.06 64.51 51 7 SER A 284 ? ? -118.85 68.85 52 7 ARG A 320 ? ? 53.86 4.33 53 7 ALA A 333 ? ? 58.66 176.61 54 7 ASP A 352 ? ? -68.73 89.81 55 7 ASP A 362 ? ? -79.95 31.71 56 7 GLN A 382 ? ? -56.36 98.15 57 8 PRO A 199 ? ? -35.65 156.49 58 8 PRO A 200 ? ? -23.34 70.15 59 8 ASN A 208 ? ? -65.86 32.01 60 8 VAL A 212 ? ? -68.02 62.76 61 8 ARG A 320 ? ? -176.26 -53.19 62 8 ALA A 333 ? ? 58.34 177.66 63 8 ASP A 362 ? ? -81.17 31.53 64 8 GLN A 382 ? ? -51.13 97.90 65 9 ASN A 208 ? ? -70.87 25.65 66 9 TRP A 211 ? ? -55.09 -8.28 67 9 VAL A 212 ? ? -63.75 64.82 68 9 GLN A 237 ? ? -53.98 81.91 69 9 ARG A 320 ? ? -176.14 -42.31 70 9 CYS A 321 ? ? -70.00 40.40 71 9 ALA A 333 ? ? 58.09 177.37 72 9 ASP A 362 ? ? -93.66 30.27 73 9 GLN A 382 ? ? -53.86 97.93 74 10 ASN A 207 ? ? -78.34 22.27 75 10 VAL A 212 ? ? -68.81 62.40 76 10 ARG A 320 ? ? 60.42 -4.40 77 10 ALA A 333 ? ? 58.03 177.18 78 10 ASP A 362 ? ? -89.42 31.21 79 10 GLN A 382 ? ? -54.61 99.23 80 11 ASN A 207 ? ? -79.00 23.10 81 11 ASN A 208 ? ? -69.92 24.18 82 11 VAL A 212 ? ? -68.64 62.54 83 11 ARG A 320 ? ? 46.80 11.05 84 11 ALA A 333 ? ? 58.55 176.27 85 11 ASP A 362 ? ? -87.44 30.90 86 11 GLN A 382 ? ? -53.43 97.95 87 12 ASN A 207 ? ? -79.55 23.04 88 12 TRP A 211 ? ? -55.79 -9.20 89 12 VAL A 212 ? ? -68.73 62.20 90 12 ARG A 320 ? ? -176.63 -44.07 91 12 CYS A 321 ? ? -70.75 43.99 92 12 ALA A 333 ? ? 57.83 176.88 93 12 ASP A 362 ? ? -93.67 31.32 94 12 GLN A 382 ? ? -46.80 97.72 95 13 ASN A 207 ? ? -78.61 22.39 96 13 TRP A 211 ? ? -59.16 -8.85 97 13 VAL A 212 ? ? -65.99 62.79 98 13 ALA A 333 ? ? 58.34 176.57 99 13 ASP A 362 ? ? -90.33 30.34 100 13 GLN A 382 ? ? -46.88 97.65 101 14 ASN A 208 ? ? -68.63 21.49 102 14 VAL A 212 ? ? -63.01 69.73 103 14 ARG A 320 ? ? -175.94 -48.29 104 14 ALA A 333 ? ? 57.99 176.98 105 14 ASP A 362 ? ? -94.54 31.20 106 14 GLN A 382 ? ? -45.34 97.73 107 15 TRP A 211 ? ? -58.77 -8.62 108 15 VAL A 212 ? ? -63.22 67.81 109 15 ALA A 333 ? ? 58.37 176.54 110 15 ASP A 362 ? ? -82.99 31.32 111 15 GLN A 382 ? ? -53.74 98.00 112 16 TRP A 211 ? ? -59.93 -8.54 113 16 VAL A 212 ? ? -63.38 67.51 114 16 ARG A 320 ? ? -175.62 -54.97 115 16 CYS A 321 ? ? -71.70 46.37 116 16 ALA A 333 ? ? 58.15 176.62 117 16 ASP A 362 ? ? -88.75 31.02 118 16 GLN A 382 ? ? -57.07 97.94 119 17 ASN A 208 ? ? -65.83 31.43 120 17 VAL A 212 ? ? -63.63 65.15 121 17 ARG A 320 ? ? 53.71 2.79 122 17 ALA A 333 ? ? 58.24 176.42 123 17 ASP A 362 ? ? -92.73 30.40 124 17 GLN A 382 ? ? -46.57 98.26 125 18 TRP A 211 ? ? -56.07 -9.11 126 18 VAL A 212 ? ? -66.50 62.78 127 18 ARG A 320 ? ? -169.74 -60.70 128 18 CYS A 321 ? ? -76.60 34.50 129 18 ALA A 333 ? ? 58.32 177.25 130 18 ASP A 362 ? ? -85.79 31.35 131 18 GLN A 382 ? ? -51.18 97.70 132 19 PRO A 199 ? ? -33.41 153.73 133 19 PRO A 200 ? ? -23.56 70.25 134 19 TRP A 211 ? ? -57.45 -9.29 135 19 VAL A 212 ? ? -63.46 67.77 136 19 ARG A 320 ? ? 63.09 -28.60 137 19 ALA A 333 ? ? 58.46 176.39 138 19 ASP A 362 ? ? -90.44 31.16 139 19 GLN A 382 ? ? -59.55 98.02 140 20 PRO A 199 ? ? -33.58 152.68 141 20 PRO A 200 ? ? -25.28 72.88 142 20 ASN A 208 ? ? -65.87 32.48 143 20 VAL A 212 ? ? -63.83 67.67 144 20 ARG A 320 ? ? 59.52 -12.90 145 20 CYS A 321 ? ? -71.07 31.62 146 20 ALA A 333 ? ? 57.71 176.46 147 20 ASP A 362 ? ? -92.02 31.09 148 20 GLN A 382 ? ? -56.15 97.87 # _pdbx_nmr_ensemble.entry_id 6K3K _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6K3K _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'target function' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION, 90% H2O/10% D2O ; '90% H2O/10% D2O' 13C,15N_sample solution ? 2 ;0.35 mM [U-99% 13C; U-99% 15N] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION, 100% D2O ; '100% D2O' 13C,15N_sample_2 solution ? 4 ;0.35 mM [U-100% 13C; U-100% 15N; U-80% 2H] DNA dC->dU-editing enzyme APOBEC3G, 0.525 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 5 mM DTT, 50 uM ZINC ION, 90% H2O/10% D2O ; '90% H2O/10% D2O' 13C,15N,2H_sample solution ? 3 ;1 mM DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3'), 50 mM sodium phosphate, 50 mM sodium chloride, 50 uM ZINC ION, 90% H2O/10% D2O ; '90% H2O/10% D2O' ssDNA solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'DNA dC->dU-editing enzyme APOBEC3G' 0.35 ? mM '[U-99% 13C; U-99% 15N]' 1 ;DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3') ; 0.525 ? mM 'natural abundance' 1 'sodium phosphate' 50 ? mM 'natural abundance' 1 'sodium chloride' 50 ? mM 'natural abundance' 1 DTT 5 ? mM 'natural abundance' 1 'ZINC ION' 50 ? uM 'natural abundance' 2 'DNA dC->dU-editing enzyme APOBEC3G' 0.35 ? mM '[U-99% 13C; U-99% 15N]' 2 ;DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3') ; 0.525 ? mM 'natural abundance' 2 'sodium phosphate' 50 ? mM 'natural abundance' 2 'sodium chloride' 50 ? mM 'natural abundance' 2 DTT 5 ? mM 'natural abundance' 2 'ZINC ION' 50 ? uM 'natural abundance' 4 'DNA dC->dU-editing enzyme APOBEC3G' 0.35 ? mM '[U-100% 13C; U-100% 15N; U-80% 2H]' 4 ;DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3') ; 0.525 ? mM 'natural abundance' 4 'sodium phosphate' 50 ? mM 'natural abundance' 4 'sodium chloride' 50 ? mM 'natural abundance' 4 DTT 5 ? mM 'natural abundance' 4 'ZINC ION' 50 ? uM 'natural abundance' 3 ;DNA/RNA (5'-D(*AP*TP*TP*CP*UP*(ICY)P*AP*AP*TP*T)-3') ; 1 ? mM 'natural abundance' 3 'sodium phosphate' 50 ? mM 'natural abundance' 3 'sodium chloride' 50 ? mM 'natural abundance' 3 'ZINC ION' 50 ? uM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 4 '3D HNCO' 2 anisotropic 2 1 4 '3D HNCA' 2 anisotropic 3 1 4 '3D HN(CO)CA' 2 anisotropic 4 1 4 '3D HNCACB' 2 anisotropic 5 1 1 '2D 1H-15N HSQC' 1 anisotropic 6 1 2 '2D 1H-13C HSQC aliphatic' 1 anisotropic 7 1 2 '2D 1H-13C HSQC aromatic' 1 anisotropic 8 1 2 '3D 1H-13C NOESY aliphatic' 3 anisotropic 9 1 2 '3D 1H-13C NOESY aromatic' 3 anisotropic 10 1 1 '3D 1H-15N NOESY' 3 anisotropic 15 1 1 '3D HCCH-TOCSY' 2 anisotropic 14 1 1 '3D 1H-15N TOCSY' 2 anisotropic 11 1 3 '2D 1H-1H NOESY' 4 anisotropic 12 1 3 '2D 1H-1H TOCSY' 4 anisotropic 13 1 3 '2D DQF-COSY' 4 anisotropic # _pdbx_nmr_refine.entry_id 6K3K _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 2 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 3 'chemical shift assignment' Sparky ? Goddard 4 'peak picking' Sparky ? Goddard 5 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C38 O3P O N N 74 C38 P P N N 75 C38 O1P O N N 76 C38 O2P O N N 77 C38 "O5'" O N N 78 C38 "C5'" C N N 79 C38 "C4'" C N R 80 C38 "O4'" O N N 81 C38 "C3'" C N S 82 C38 "O3'" O N N 83 C38 "C2'" C N N 84 C38 "C1'" C N R 85 C38 N1 N N N 86 C38 C2 C N N 87 C38 O2 O N N 88 C38 N3 N N N 89 C38 C4 C N N 90 C38 N4 N N N 91 C38 C5 C N N 92 C38 C6 C N N 93 C38 I I N N 94 C38 H3P H N N 95 C38 H2P H N N 96 C38 "H5'1" H N N 97 C38 "H5'2" H N N 98 C38 "H4'" H N N 99 C38 "H3'" H N N 100 C38 HA H N N 101 C38 "H2'1" H N N 102 C38 "H2'2" H N N 103 C38 "H1'" H N N 104 C38 H4N1 H N N 105 C38 H4N2 H N N 106 C38 H6 H N N 107 CYS N N N N 108 CYS CA C N R 109 CYS C C N N 110 CYS O O N N 111 CYS CB C N N 112 CYS SG S N N 113 CYS OXT O N N 114 CYS H H N N 115 CYS H2 H N N 116 CYS HA H N N 117 CYS HB2 H N N 118 CYS HB3 H N N 119 CYS HG H N N 120 CYS HXT H N N 121 DA OP3 O N N 122 DA P P N N 123 DA OP1 O N N 124 DA OP2 O N N 125 DA "O5'" O N N 126 DA "C5'" C N N 127 DA "C4'" C N R 128 DA "O4'" O N N 129 DA "C3'" C N S 130 DA "O3'" O N N 131 DA "C2'" C N N 132 DA "C1'" C N R 133 DA N9 N Y N 134 DA C8 C Y N 135 DA N7 N Y N 136 DA C5 C Y N 137 DA C6 C Y N 138 DA N6 N N N 139 DA N1 N Y N 140 DA C2 C Y N 141 DA N3 N Y N 142 DA C4 C Y N 143 DA HOP3 H N N 144 DA HOP2 H N N 145 DA "H5'" H N N 146 DA "H5''" H N N 147 DA "H4'" H N N 148 DA "H3'" H N N 149 DA "HO3'" H N N 150 DA "H2'" H N N 151 DA "H2''" H N N 152 DA "H1'" H N N 153 DA H8 H N N 154 DA H61 H N N 155 DA H62 H N N 156 DA H2 H N N 157 DC OP3 O N N 158 DC P P N N 159 DC OP1 O N N 160 DC OP2 O N N 161 DC "O5'" O N N 162 DC "C5'" C N N 163 DC "C4'" C N R 164 DC "O4'" O N N 165 DC "C3'" C N S 166 DC "O3'" O N N 167 DC "C2'" C N N 168 DC "C1'" C N R 169 DC N1 N N N 170 DC C2 C N N 171 DC O2 O N N 172 DC N3 N N N 173 DC C4 C N N 174 DC N4 N N N 175 DC C5 C N N 176 DC C6 C N N 177 DC HOP3 H N N 178 DC HOP2 H N N 179 DC "H5'" H N N 180 DC "H5''" H N N 181 DC "H4'" H N N 182 DC "H3'" H N N 183 DC "HO3'" H N N 184 DC "H2'" H N N 185 DC "H2''" H N N 186 DC "H1'" H N N 187 DC H41 H N N 188 DC H42 H N N 189 DC H5 H N N 190 DC H6 H N N 191 DT OP3 O N N 192 DT P P N N 193 DT OP1 O N N 194 DT OP2 O N N 195 DT "O5'" O N N 196 DT "C5'" C N N 197 DT "C4'" C N R 198 DT "O4'" O N N 199 DT "C3'" C N S 200 DT "O3'" O N N 201 DT "C2'" C N N 202 DT "C1'" C N R 203 DT N1 N N N 204 DT C2 C N N 205 DT O2 O N N 206 DT N3 N N N 207 DT C4 C N N 208 DT O4 O N N 209 DT C5 C N N 210 DT C7 C N N 211 DT C6 C N N 212 DT HOP3 H N N 213 DT HOP2 H N N 214 DT "H5'" H N N 215 DT "H5''" H N N 216 DT "H4'" H N N 217 DT "H3'" H N N 218 DT "HO3'" H N N 219 DT "H2'" H N N 220 DT "H2''" H N N 221 DT "H1'" H N N 222 DT H3 H N N 223 DT H71 H N N 224 DT H72 H N N 225 DT H73 H N N 226 DT H6 H N N 227 DU OP3 O N N 228 DU P P N N 229 DU OP1 O N N 230 DU OP2 O N N 231 DU "O5'" O N N 232 DU "C5'" C N N 233 DU "C4'" C N R 234 DU "O4'" O N N 235 DU "C3'" C N S 236 DU "O3'" O N N 237 DU "C2'" C N N 238 DU "C1'" C N R 239 DU N1 N N N 240 DU C2 C N N 241 DU O2 O N N 242 DU N3 N N N 243 DU C4 C N N 244 DU O4 O N N 245 DU C5 C N N 246 DU C6 C N N 247 DU HOP3 H N N 248 DU HOP2 H N N 249 DU "H5'" H N N 250 DU "H5''" H N N 251 DU "H4'" H N N 252 DU "H3'" H N N 253 DU "HO3'" H N N 254 DU "H2'" H N N 255 DU "H2''" H N N 256 DU "H1'" H N N 257 DU H3 H N N 258 DU H5 H N N 259 DU H6 H N N 260 GLN N N N N 261 GLN CA C N S 262 GLN C C N N 263 GLN O O N N 264 GLN CB C N N 265 GLN CG C N N 266 GLN CD C N N 267 GLN OE1 O N N 268 GLN NE2 N N N 269 GLN OXT O N N 270 GLN H H N N 271 GLN H2 H N N 272 GLN HA H N N 273 GLN HB2 H N N 274 GLN HB3 H N N 275 GLN HG2 H N N 276 GLN HG3 H N N 277 GLN HE21 H N N 278 GLN HE22 H N N 279 GLN HXT H N N 280 GLU N N N N 281 GLU CA C N S 282 GLU C C N N 283 GLU O O N N 284 GLU CB C N N 285 GLU CG C N N 286 GLU CD C N N 287 GLU OE1 O N N 288 GLU OE2 O N N 289 GLU OXT O N N 290 GLU H H N N 291 GLU H2 H N N 292 GLU HA H N N 293 GLU HB2 H N N 294 GLU HB3 H N N 295 GLU HG2 H N N 296 GLU HG3 H N N 297 GLU HE2 H N N 298 GLU HXT H N N 299 GLY N N N N 300 GLY CA C N N 301 GLY C C N N 302 GLY O O N N 303 GLY OXT O N N 304 GLY H H N N 305 GLY H2 H N N 306 GLY HA2 H N N 307 GLY HA3 H N N 308 GLY HXT H N N 309 HIS N N N N 310 HIS CA C N S 311 HIS C C N N 312 HIS O O N N 313 HIS CB C N N 314 HIS CG C Y N 315 HIS ND1 N Y N 316 HIS CD2 C Y N 317 HIS CE1 C Y N 318 HIS NE2 N Y N 319 HIS OXT O N N 320 HIS H H N N 321 HIS H2 H N N 322 HIS HA H N N 323 HIS HB2 H N N 324 HIS HB3 H N N 325 HIS HD1 H N N 326 HIS HD2 H N N 327 HIS HE1 H N N 328 HIS HE2 H N N 329 HIS HXT H N N 330 ILE N N N N 331 ILE CA C N S 332 ILE C C N N 333 ILE O O N N 334 ILE CB C N S 335 ILE CG1 C N N 336 ILE CG2 C N N 337 ILE CD1 C N N 338 ILE OXT O N N 339 ILE H H N N 340 ILE H2 H N N 341 ILE HA H N N 342 ILE HB H N N 343 ILE HG12 H N N 344 ILE HG13 H N N 345 ILE HG21 H N N 346 ILE HG22 H N N 347 ILE HG23 H N N 348 ILE HD11 H N N 349 ILE HD12 H N N 350 ILE HD13 H N N 351 ILE HXT H N N 352 LEU N N N N 353 LEU CA C N S 354 LEU C C N N 355 LEU O O N N 356 LEU CB C N N 357 LEU CG C N N 358 LEU CD1 C N N 359 LEU CD2 C N N 360 LEU OXT O N N 361 LEU H H N N 362 LEU H2 H N N 363 LEU HA H N N 364 LEU HB2 H N N 365 LEU HB3 H N N 366 LEU HG H N N 367 LEU HD11 H N N 368 LEU HD12 H N N 369 LEU HD13 H N N 370 LEU HD21 H N N 371 LEU HD22 H N N 372 LEU HD23 H N N 373 LEU HXT H N N 374 LYS N N N N 375 LYS CA C N S 376 LYS C C N N 377 LYS O O N N 378 LYS CB C N N 379 LYS CG C N N 380 LYS CD C N N 381 LYS CE C N N 382 LYS NZ N N N 383 LYS OXT O N N 384 LYS H H N N 385 LYS H2 H N N 386 LYS HA H N N 387 LYS HB2 H N N 388 LYS HB3 H N N 389 LYS HG2 H N N 390 LYS HG3 H N N 391 LYS HD2 H N N 392 LYS HD3 H N N 393 LYS HE2 H N N 394 LYS HE3 H N N 395 LYS HZ1 H N N 396 LYS HZ2 H N N 397 LYS HZ3 H N N 398 LYS HXT H N N 399 MET N N N N 400 MET CA C N S 401 MET C C N N 402 MET O O N N 403 MET CB C N N 404 MET CG C N N 405 MET SD S N N 406 MET CE C N N 407 MET OXT O N N 408 MET H H N N 409 MET H2 H N N 410 MET HA H N N 411 MET HB2 H N N 412 MET HB3 H N N 413 MET HG2 H N N 414 MET HG3 H N N 415 MET HE1 H N N 416 MET HE2 H N N 417 MET HE3 H N N 418 MET HXT H N N 419 PHE N N N N 420 PHE CA C N S 421 PHE C C N N 422 PHE O O N N 423 PHE CB C N N 424 PHE CG C Y N 425 PHE CD1 C Y N 426 PHE CD2 C Y N 427 PHE CE1 C Y N 428 PHE CE2 C Y N 429 PHE CZ C Y N 430 PHE OXT O N N 431 PHE H H N N 432 PHE H2 H N N 433 PHE HA H N N 434 PHE HB2 H N N 435 PHE HB3 H N N 436 PHE HD1 H N N 437 PHE HD2 H N N 438 PHE HE1 H N N 439 PHE HE2 H N N 440 PHE HZ H N N 441 PHE HXT H N N 442 PRO N N N N 443 PRO CA C N S 444 PRO C C N N 445 PRO O O N N 446 PRO CB C N N 447 PRO CG C N N 448 PRO CD C N N 449 PRO OXT O N N 450 PRO H H N N 451 PRO HA H N N 452 PRO HB2 H N N 453 PRO HB3 H N N 454 PRO HG2 H N N 455 PRO HG3 H N N 456 PRO HD2 H N N 457 PRO HD3 H N N 458 PRO HXT H N N 459 SER N N N N 460 SER CA C N S 461 SER C C N N 462 SER O O N N 463 SER CB C N N 464 SER OG O N N 465 SER OXT O N N 466 SER H H N N 467 SER H2 H N N 468 SER HA H N N 469 SER HB2 H N N 470 SER HB3 H N N 471 SER HG H N N 472 SER HXT H N N 473 THR N N N N 474 THR CA C N S 475 THR C C N N 476 THR O O N N 477 THR CB C N R 478 THR OG1 O N N 479 THR CG2 C N N 480 THR OXT O N N 481 THR H H N N 482 THR H2 H N N 483 THR HA H N N 484 THR HB H N N 485 THR HG1 H N N 486 THR HG21 H N N 487 THR HG22 H N N 488 THR HG23 H N N 489 THR HXT H N N 490 TRP N N N N 491 TRP CA C N S 492 TRP C C N N 493 TRP O O N N 494 TRP CB C N N 495 TRP CG C Y N 496 TRP CD1 C Y N 497 TRP CD2 C Y N 498 TRP NE1 N Y N 499 TRP CE2 C Y N 500 TRP CE3 C Y N 501 TRP CZ2 C Y N 502 TRP CZ3 C Y N 503 TRP CH2 C Y N 504 TRP OXT O N N 505 TRP H H N N 506 TRP H2 H N N 507 TRP HA H N N 508 TRP HB2 H N N 509 TRP HB3 H N N 510 TRP HD1 H N N 511 TRP HE1 H N N 512 TRP HE3 H N N 513 TRP HZ2 H N N 514 TRP HZ3 H N N 515 TRP HH2 H N N 516 TRP HXT H N N 517 TYR N N N N 518 TYR CA C N S 519 TYR C C N N 520 TYR O O N N 521 TYR CB C N N 522 TYR CG C Y N 523 TYR CD1 C Y N 524 TYR CD2 C Y N 525 TYR CE1 C Y N 526 TYR CE2 C Y N 527 TYR CZ C Y N 528 TYR OH O N N 529 TYR OXT O N N 530 TYR H H N N 531 TYR H2 H N N 532 TYR HA H N N 533 TYR HB2 H N N 534 TYR HB3 H N N 535 TYR HD1 H N N 536 TYR HD2 H N N 537 TYR HE1 H N N 538 TYR HE2 H N N 539 TYR HH H N N 540 TYR HXT H N N 541 VAL N N N N 542 VAL CA C N S 543 VAL C C N N 544 VAL O O N N 545 VAL CB C N N 546 VAL CG1 C N N 547 VAL CG2 C N N 548 VAL OXT O N N 549 VAL H H N N 550 VAL H2 H N N 551 VAL HA H N N 552 VAL HB H N N 553 VAL HG11 H N N 554 VAL HG12 H N N 555 VAL HG13 H N N 556 VAL HG21 H N N 557 VAL HG22 H N N 558 VAL HG23 H N N 559 VAL HXT H N N 560 ZN ZN ZN N N 561 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C38 O3P P sing N N 70 C38 O3P H3P sing N N 71 C38 P O1P doub N N 72 C38 P O2P sing N N 73 C38 P "O5'" sing N N 74 C38 O2P H2P sing N N 75 C38 "O5'" "C5'" sing N N 76 C38 "C5'" "C4'" sing N N 77 C38 "C5'" "H5'1" sing N N 78 C38 "C5'" "H5'2" sing N N 79 C38 "C4'" "O4'" sing N N 80 C38 "C4'" "C3'" sing N N 81 C38 "C4'" "H4'" sing N N 82 C38 "O4'" "C1'" sing N N 83 C38 "C3'" "O3'" sing N N 84 C38 "C3'" "C2'" sing N N 85 C38 "C3'" "H3'" sing N N 86 C38 "O3'" HA sing N N 87 C38 "C2'" "C1'" sing N N 88 C38 "C2'" "H2'1" sing N N 89 C38 "C2'" "H2'2" sing N N 90 C38 "C1'" N1 sing N N 91 C38 "C1'" "H1'" sing N N 92 C38 N1 C2 sing N N 93 C38 N1 C6 sing N N 94 C38 C2 O2 doub N N 95 C38 C2 N3 sing N N 96 C38 N3 C4 doub N N 97 C38 C4 N4 sing N N 98 C38 C4 C5 sing N N 99 C38 N4 H4N1 sing N N 100 C38 N4 H4N2 sing N N 101 C38 C5 C6 doub N N 102 C38 C5 I sing N N 103 C38 C6 H6 sing N N 104 CYS N CA sing N N 105 CYS N H sing N N 106 CYS N H2 sing N N 107 CYS CA C sing N N 108 CYS CA CB sing N N 109 CYS CA HA sing N N 110 CYS C O doub N N 111 CYS C OXT sing N N 112 CYS CB SG sing N N 113 CYS CB HB2 sing N N 114 CYS CB HB3 sing N N 115 CYS SG HG sing N N 116 CYS OXT HXT sing N N 117 DA OP3 P sing N N 118 DA OP3 HOP3 sing N N 119 DA P OP1 doub N N 120 DA P OP2 sing N N 121 DA P "O5'" sing N N 122 DA OP2 HOP2 sing N N 123 DA "O5'" "C5'" sing N N 124 DA "C5'" "C4'" sing N N 125 DA "C5'" "H5'" sing N N 126 DA "C5'" "H5''" sing N N 127 DA "C4'" "O4'" sing N N 128 DA "C4'" "C3'" sing N N 129 DA "C4'" "H4'" sing N N 130 DA "O4'" "C1'" sing N N 131 DA "C3'" "O3'" sing N N 132 DA "C3'" "C2'" sing N N 133 DA "C3'" "H3'" sing N N 134 DA "O3'" "HO3'" sing N N 135 DA "C2'" "C1'" sing N N 136 DA "C2'" "H2'" sing N N 137 DA "C2'" "H2''" sing N N 138 DA "C1'" N9 sing N N 139 DA "C1'" "H1'" sing N N 140 DA N9 C8 sing Y N 141 DA N9 C4 sing Y N 142 DA C8 N7 doub Y N 143 DA C8 H8 sing N N 144 DA N7 C5 sing Y N 145 DA C5 C6 sing Y N 146 DA C5 C4 doub Y N 147 DA C6 N6 sing N N 148 DA C6 N1 doub Y N 149 DA N6 H61 sing N N 150 DA N6 H62 sing N N 151 DA N1 C2 sing Y N 152 DA C2 N3 doub Y N 153 DA C2 H2 sing N N 154 DA N3 C4 sing Y N 155 DC OP3 P sing N N 156 DC OP3 HOP3 sing N N 157 DC P OP1 doub N N 158 DC P OP2 sing N N 159 DC P "O5'" sing N N 160 DC OP2 HOP2 sing N N 161 DC "O5'" "C5'" sing N N 162 DC "C5'" "C4'" sing N N 163 DC "C5'" "H5'" sing N N 164 DC "C5'" "H5''" sing N N 165 DC "C4'" "O4'" sing N N 166 DC "C4'" "C3'" sing N N 167 DC "C4'" "H4'" sing N N 168 DC "O4'" "C1'" sing N N 169 DC "C3'" "O3'" sing N N 170 DC "C3'" "C2'" sing N N 171 DC "C3'" "H3'" sing N N 172 DC "O3'" "HO3'" sing N N 173 DC "C2'" "C1'" sing N N 174 DC "C2'" "H2'" sing N N 175 DC "C2'" "H2''" sing N N 176 DC "C1'" N1 sing N N 177 DC "C1'" "H1'" sing N N 178 DC N1 C2 sing N N 179 DC N1 C6 sing N N 180 DC C2 O2 doub N N 181 DC C2 N3 sing N N 182 DC N3 C4 doub N N 183 DC C4 N4 sing N N 184 DC C4 C5 sing N N 185 DC N4 H41 sing N N 186 DC N4 H42 sing N N 187 DC C5 C6 doub N N 188 DC C5 H5 sing N N 189 DC C6 H6 sing N N 190 DT OP3 P sing N N 191 DT OP3 HOP3 sing N N 192 DT P OP1 doub N N 193 DT P OP2 sing N N 194 DT P "O5'" sing N N 195 DT OP2 HOP2 sing N N 196 DT "O5'" "C5'" sing N N 197 DT "C5'" "C4'" sing N N 198 DT "C5'" "H5'" sing N N 199 DT "C5'" "H5''" sing N N 200 DT "C4'" "O4'" sing N N 201 DT "C4'" "C3'" sing N N 202 DT "C4'" "H4'" sing N N 203 DT "O4'" "C1'" sing N N 204 DT "C3'" "O3'" sing N N 205 DT "C3'" "C2'" sing N N 206 DT "C3'" "H3'" sing N N 207 DT "O3'" "HO3'" sing N N 208 DT "C2'" "C1'" sing N N 209 DT "C2'" "H2'" sing N N 210 DT "C2'" "H2''" sing N N 211 DT "C1'" N1 sing N N 212 DT "C1'" "H1'" sing N N 213 DT N1 C2 sing N N 214 DT N1 C6 sing N N 215 DT C2 O2 doub N N 216 DT C2 N3 sing N N 217 DT N3 C4 sing N N 218 DT N3 H3 sing N N 219 DT C4 O4 doub N N 220 DT C4 C5 sing N N 221 DT C5 C7 sing N N 222 DT C5 C6 doub N N 223 DT C7 H71 sing N N 224 DT C7 H72 sing N N 225 DT C7 H73 sing N N 226 DT C6 H6 sing N N 227 DU OP3 P sing N N 228 DU OP3 HOP3 sing N N 229 DU P OP1 doub N N 230 DU P OP2 sing N N 231 DU P "O5'" sing N N 232 DU OP2 HOP2 sing N N 233 DU "O5'" "C5'" sing N N 234 DU "C5'" "C4'" sing N N 235 DU "C5'" "H5'" sing N N 236 DU "C5'" "H5''" sing N N 237 DU "C4'" "O4'" sing N N 238 DU "C4'" "C3'" sing N N 239 DU "C4'" "H4'" sing N N 240 DU "O4'" "C1'" sing N N 241 DU "C3'" "O3'" sing N N 242 DU "C3'" "C2'" sing N N 243 DU "C3'" "H3'" sing N N 244 DU "O3'" "HO3'" sing N N 245 DU "C2'" "C1'" sing N N 246 DU "C2'" "H2'" sing N N 247 DU "C2'" "H2''" sing N N 248 DU "C1'" N1 sing N N 249 DU "C1'" "H1'" sing N N 250 DU N1 C2 sing N N 251 DU N1 C6 sing N N 252 DU C2 O2 doub N N 253 DU C2 N3 sing N N 254 DU N3 C4 sing N N 255 DU N3 H3 sing N N 256 DU C4 O4 doub N N 257 DU C4 C5 sing N N 258 DU C5 C6 doub N N 259 DU C5 H5 sing N N 260 DU C6 H6 sing N N 261 GLN N CA sing N N 262 GLN N H sing N N 263 GLN N H2 sing N N 264 GLN CA C sing N N 265 GLN CA CB sing N N 266 GLN CA HA sing N N 267 GLN C O doub N N 268 GLN C OXT sing N N 269 GLN CB CG sing N N 270 GLN CB HB2 sing N N 271 GLN CB HB3 sing N N 272 GLN CG CD sing N N 273 GLN CG HG2 sing N N 274 GLN CG HG3 sing N N 275 GLN CD OE1 doub N N 276 GLN CD NE2 sing N N 277 GLN NE2 HE21 sing N N 278 GLN NE2 HE22 sing N N 279 GLN OXT HXT sing N N 280 GLU N CA sing N N 281 GLU N H sing N N 282 GLU N H2 sing N N 283 GLU CA C sing N N 284 GLU CA CB sing N N 285 GLU CA HA sing N N 286 GLU C O doub N N 287 GLU C OXT sing N N 288 GLU CB CG sing N N 289 GLU CB HB2 sing N N 290 GLU CB HB3 sing N N 291 GLU CG CD sing N N 292 GLU CG HG2 sing N N 293 GLU CG HG3 sing N N 294 GLU CD OE1 doub N N 295 GLU CD OE2 sing N N 296 GLU OE2 HE2 sing N N 297 GLU OXT HXT sing N N 298 GLY N CA sing N N 299 GLY N H sing N N 300 GLY N H2 sing N N 301 GLY CA C sing N N 302 GLY CA HA2 sing N N 303 GLY CA HA3 sing N N 304 GLY C O doub N N 305 GLY C OXT sing N N 306 GLY OXT HXT sing N N 307 HIS N CA sing N N 308 HIS N H sing N N 309 HIS N H2 sing N N 310 HIS CA C sing N N 311 HIS CA CB sing N N 312 HIS CA HA sing N N 313 HIS C O doub N N 314 HIS C OXT sing N N 315 HIS CB CG sing N N 316 HIS CB HB2 sing N N 317 HIS CB HB3 sing N N 318 HIS CG ND1 sing Y N 319 HIS CG CD2 doub Y N 320 HIS ND1 CE1 doub Y N 321 HIS ND1 HD1 sing N N 322 HIS CD2 NE2 sing Y N 323 HIS CD2 HD2 sing N N 324 HIS CE1 NE2 sing Y N 325 HIS CE1 HE1 sing N N 326 HIS NE2 HE2 sing N N 327 HIS OXT HXT sing N N 328 ILE N CA sing N N 329 ILE N H sing N N 330 ILE N H2 sing N N 331 ILE CA C sing N N 332 ILE CA CB sing N N 333 ILE CA HA sing N N 334 ILE C O doub N N 335 ILE C OXT sing N N 336 ILE CB CG1 sing N N 337 ILE CB CG2 sing N N 338 ILE CB HB sing N N 339 ILE CG1 CD1 sing N N 340 ILE CG1 HG12 sing N N 341 ILE CG1 HG13 sing N N 342 ILE CG2 HG21 sing N N 343 ILE CG2 HG22 sing N N 344 ILE CG2 HG23 sing N N 345 ILE CD1 HD11 sing N N 346 ILE CD1 HD12 sing N N 347 ILE CD1 HD13 sing N N 348 ILE OXT HXT sing N N 349 LEU N CA sing N N 350 LEU N H sing N N 351 LEU N H2 sing N N 352 LEU CA C sing N N 353 LEU CA CB sing N N 354 LEU CA HA sing N N 355 LEU C O doub N N 356 LEU C OXT sing N N 357 LEU CB CG sing N N 358 LEU CB HB2 sing N N 359 LEU CB HB3 sing N N 360 LEU CG CD1 sing N N 361 LEU CG CD2 sing N N 362 LEU CG HG sing N N 363 LEU CD1 HD11 sing N N 364 LEU CD1 HD12 sing N N 365 LEU CD1 HD13 sing N N 366 LEU CD2 HD21 sing N N 367 LEU CD2 HD22 sing N N 368 LEU CD2 HD23 sing N N 369 LEU OXT HXT sing N N 370 LYS N CA sing N N 371 LYS N H sing N N 372 LYS N H2 sing N N 373 LYS CA C sing N N 374 LYS CA CB sing N N 375 LYS CA HA sing N N 376 LYS C O doub N N 377 LYS C OXT sing N N 378 LYS CB CG sing N N 379 LYS CB HB2 sing N N 380 LYS CB HB3 sing N N 381 LYS CG CD sing N N 382 LYS CG HG2 sing N N 383 LYS CG HG3 sing N N 384 LYS CD CE sing N N 385 LYS CD HD2 sing N N 386 LYS CD HD3 sing N N 387 LYS CE NZ sing N N 388 LYS CE HE2 sing N N 389 LYS CE HE3 sing N N 390 LYS NZ HZ1 sing N N 391 LYS NZ HZ2 sing N N 392 LYS NZ HZ3 sing N N 393 LYS OXT HXT sing N N 394 MET N CA sing N N 395 MET N H sing N N 396 MET N H2 sing N N 397 MET CA C sing N N 398 MET CA CB sing N N 399 MET CA HA sing N N 400 MET C O doub N N 401 MET C OXT sing N N 402 MET CB CG sing N N 403 MET CB HB2 sing N N 404 MET CB HB3 sing N N 405 MET CG SD sing N N 406 MET CG HG2 sing N N 407 MET CG HG3 sing N N 408 MET SD CE sing N N 409 MET CE HE1 sing N N 410 MET CE HE2 sing N N 411 MET CE HE3 sing N N 412 MET OXT HXT sing N N 413 PHE N CA sing N N 414 PHE N H sing N N 415 PHE N H2 sing N N 416 PHE CA C sing N N 417 PHE CA CB sing N N 418 PHE CA HA sing N N 419 PHE C O doub N N 420 PHE C OXT sing N N 421 PHE CB CG sing N N 422 PHE CB HB2 sing N N 423 PHE CB HB3 sing N N 424 PHE CG CD1 doub Y N 425 PHE CG CD2 sing Y N 426 PHE CD1 CE1 sing Y N 427 PHE CD1 HD1 sing N N 428 PHE CD2 CE2 doub Y N 429 PHE CD2 HD2 sing N N 430 PHE CE1 CZ doub Y N 431 PHE CE1 HE1 sing N N 432 PHE CE2 CZ sing Y N 433 PHE CE2 HE2 sing N N 434 PHE CZ HZ sing N N 435 PHE OXT HXT sing N N 436 PRO N CA sing N N 437 PRO N CD sing N N 438 PRO N H sing N N 439 PRO CA C sing N N 440 PRO CA CB sing N N 441 PRO CA HA sing N N 442 PRO C O doub N N 443 PRO C OXT sing N N 444 PRO CB CG sing N N 445 PRO CB HB2 sing N N 446 PRO CB HB3 sing N N 447 PRO CG CD sing N N 448 PRO CG HG2 sing N N 449 PRO CG HG3 sing N N 450 PRO CD HD2 sing N N 451 PRO CD HD3 sing N N 452 PRO OXT HXT sing N N 453 SER N CA sing N N 454 SER N H sing N N 455 SER N H2 sing N N 456 SER CA C sing N N 457 SER CA CB sing N N 458 SER CA HA sing N N 459 SER C O doub N N 460 SER C OXT sing N N 461 SER CB OG sing N N 462 SER CB HB2 sing N N 463 SER CB HB3 sing N N 464 SER OG HG sing N N 465 SER OXT HXT sing N N 466 THR N CA sing N N 467 THR N H sing N N 468 THR N H2 sing N N 469 THR CA C sing N N 470 THR CA CB sing N N 471 THR CA HA sing N N 472 THR C O doub N N 473 THR C OXT sing N N 474 THR CB OG1 sing N N 475 THR CB CG2 sing N N 476 THR CB HB sing N N 477 THR OG1 HG1 sing N N 478 THR CG2 HG21 sing N N 479 THR CG2 HG22 sing N N 480 THR CG2 HG23 sing N N 481 THR OXT HXT sing N N 482 TRP N CA sing N N 483 TRP N H sing N N 484 TRP N H2 sing N N 485 TRP CA C sing N N 486 TRP CA CB sing N N 487 TRP CA HA sing N N 488 TRP C O doub N N 489 TRP C OXT sing N N 490 TRP CB CG sing N N 491 TRP CB HB2 sing N N 492 TRP CB HB3 sing N N 493 TRP CG CD1 doub Y N 494 TRP CG CD2 sing Y N 495 TRP CD1 NE1 sing Y N 496 TRP CD1 HD1 sing N N 497 TRP CD2 CE2 doub Y N 498 TRP CD2 CE3 sing Y N 499 TRP NE1 CE2 sing Y N 500 TRP NE1 HE1 sing N N 501 TRP CE2 CZ2 sing Y N 502 TRP CE3 CZ3 doub Y N 503 TRP CE3 HE3 sing N N 504 TRP CZ2 CH2 doub Y N 505 TRP CZ2 HZ2 sing N N 506 TRP CZ3 CH2 sing Y N 507 TRP CZ3 HZ3 sing N N 508 TRP CH2 HH2 sing N N 509 TRP OXT HXT sing N N 510 TYR N CA sing N N 511 TYR N H sing N N 512 TYR N H2 sing N N 513 TYR CA C sing N N 514 TYR CA CB sing N N 515 TYR CA HA sing N N 516 TYR C O doub N N 517 TYR C OXT sing N N 518 TYR CB CG sing N N 519 TYR CB HB2 sing N N 520 TYR CB HB3 sing N N 521 TYR CG CD1 doub Y N 522 TYR CG CD2 sing Y N 523 TYR CD1 CE1 sing Y N 524 TYR CD1 HD1 sing N N 525 TYR CD2 CE2 doub Y N 526 TYR CD2 HD2 sing N N 527 TYR CE1 CZ doub Y N 528 TYR CE1 HE1 sing N N 529 TYR CE2 CZ sing Y N 530 TYR CE2 HE2 sing N N 531 TYR CZ OH sing N N 532 TYR OH HH sing N N 533 TYR OXT HXT sing N N 534 VAL N CA sing N N 535 VAL N H sing N N 536 VAL N H2 sing N N 537 VAL CA C sing N N 538 VAL CA CB sing N N 539 VAL CA HA sing N N 540 VAL C O doub N N 541 VAL C OXT sing N N 542 VAL CB CG1 sing N N 543 VAL CB CG2 sing N N 544 VAL CB HB sing N N 545 VAL CG1 HG11 sing N N 546 VAL CG1 HG12 sing N N 547 VAL CG1 HG13 sing N N 548 VAL CG2 HG21 sing N N 549 VAL CG2 HG22 sing N N 550 VAL CG2 HG23 sing N N 551 VAL OXT HXT sing N N 552 # _pdbx_audit_support.funding_organization 'National Science Foundation (China)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 21778065 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id C38 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id C38 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III' ? Bruker 800 ? 2 'AVANCE III' ? Bruker 850 ? 3 'AVANCE III' ? Bruker 900 ? 4 UNITY ? Varian 600 ? # _atom_sites.entry_id 6K3K _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H I N O P S ZN # loop_