data_6K4J # _entry.id 6K4J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.324 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6K4J WWPDB D_1300012260 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6K4J _pdbx_database_status.recvd_initial_deposition_date 2019-05-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Umeda, R.' 1 ? 'Nishizawa, T.' 2 ? 'Sato, K.' 3 ? 'Nureki, O.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first 1606 _citation.page_last 1606 _citation.title 'Structural insights into tetraspanin CD9 function.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-020-15459-7 _citation.pdbx_database_id_PubMed 32231207 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Umeda, R.' 1 ? primary 'Satouh, Y.' 2 ? primary 'Takemoto, M.' 3 0000-0002-6339-6431 primary 'Nakada-Nakura, Y.' 4 0000-0003-0598-796X primary 'Liu, K.' 5 ? primary 'Yokoyama, T.' 6 ? primary 'Shirouzu, M.' 7 0000-0002-7997-2149 primary 'Iwata, S.' 8 0000-0003-1735-2937 primary 'Nomura, N.' 9 0000-0002-6330-2239 primary 'Sato, K.' 10 0000-0002-1034-5091 primary 'Ikawa, M.' 11 0000-0001-9859-6217 primary 'Nishizawa, T.' 12 0000-0001-7463-8398 primary 'Nureki, O.' 13 0000-0003-1813-7008 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6K4J _cell.details ? _cell.formula_units_Z ? _cell.length_a 45.180 _cell.length_a_esd ? _cell.length_b 125.210 _cell.length_b_esd ? _cell.length_c 129.400 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CD9 antigen' 25439.947 1 ? ? ? ? 2 non-polymer syn 'PALMITIC ACID' 256.424 1 ? ? ? ? 3 non-polymer syn '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 356.540 1 ? ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 5 water nat water 18.015 13 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '5H9 antigen,Cell growth-inhibiting gene 2 protein,Leukocyte antigen MIC3,Motility-related protein,MRP-1,Tetraspanin-29,Tspan-29,p24' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSREFMPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGVYILIGAGALMMLVGF LGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGL AGGVEQFISDICPKKDVLESCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV ; _entity_poly.pdbx_seq_one_letter_code_can ;GSREFMPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGVYILIGAGALMMLVGF LGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGL AGGVEQFISDICPKKDVLESCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ARG n 1 4 GLU n 1 5 PHE n 1 6 MET n 1 7 PRO n 1 8 VAL n 1 9 LYS n 1 10 GLY n 1 11 GLY n 1 12 THR n 1 13 LYS n 1 14 CYS n 1 15 ILE n 1 16 LYS n 1 17 TYR n 1 18 LEU n 1 19 LEU n 1 20 PHE n 1 21 GLY n 1 22 PHE n 1 23 ASN n 1 24 PHE n 1 25 ILE n 1 26 PHE n 1 27 TRP n 1 28 LEU n 1 29 ALA n 1 30 GLY n 1 31 ILE n 1 32 ALA n 1 33 VAL n 1 34 LEU n 1 35 ALA n 1 36 ILE n 1 37 GLY n 1 38 LEU n 1 39 TRP n 1 40 LEU n 1 41 ARG n 1 42 PHE n 1 43 ASP n 1 44 SER n 1 45 GLN n 1 46 THR n 1 47 LYS n 1 48 SER n 1 49 ILE n 1 50 PHE n 1 51 GLU n 1 52 GLN n 1 53 GLU n 1 54 THR n 1 55 ASN n 1 56 ASN n 1 57 ASN n 1 58 ASN n 1 59 SER n 1 60 SER n 1 61 PHE n 1 62 TYR n 1 63 THR n 1 64 GLY n 1 65 VAL n 1 66 TYR n 1 67 ILE n 1 68 LEU n 1 69 ILE n 1 70 GLY n 1 71 ALA n 1 72 GLY n 1 73 ALA n 1 74 LEU n 1 75 MET n 1 76 MET n 1 77 LEU n 1 78 VAL n 1 79 GLY n 1 80 PHE n 1 81 LEU n 1 82 GLY n 1 83 CYS n 1 84 CYS n 1 85 GLY n 1 86 ALA n 1 87 VAL n 1 88 GLN n 1 89 GLU n 1 90 SER n 1 91 GLN n 1 92 CYS n 1 93 MET n 1 94 LEU n 1 95 GLY n 1 96 LEU n 1 97 PHE n 1 98 PHE n 1 99 GLY n 1 100 PHE n 1 101 LEU n 1 102 LEU n 1 103 VAL n 1 104 ILE n 1 105 PHE n 1 106 ALA n 1 107 ILE n 1 108 GLU n 1 109 ILE n 1 110 ALA n 1 111 ALA n 1 112 ALA n 1 113 ILE n 1 114 TRP n 1 115 GLY n 1 116 TYR n 1 117 SER n 1 118 HIS n 1 119 LYS n 1 120 ASP n 1 121 GLU n 1 122 VAL n 1 123 ILE n 1 124 LYS n 1 125 GLU n 1 126 VAL n 1 127 GLN n 1 128 GLU n 1 129 PHE n 1 130 TYR n 1 131 LYS n 1 132 ASP n 1 133 THR n 1 134 TYR n 1 135 ASN n 1 136 LYS n 1 137 LEU n 1 138 LYS n 1 139 THR n 1 140 LYS n 1 141 ASP n 1 142 GLU n 1 143 PRO n 1 144 GLN n 1 145 ARG n 1 146 GLU n 1 147 THR n 1 148 LEU n 1 149 LYS n 1 150 ALA n 1 151 ILE n 1 152 HIS n 1 153 TYR n 1 154 ALA n 1 155 LEU n 1 156 ASN n 1 157 CYS n 1 158 CYS n 1 159 GLY n 1 160 LEU n 1 161 ALA n 1 162 GLY n 1 163 GLY n 1 164 VAL n 1 165 GLU n 1 166 GLN n 1 167 PHE n 1 168 ILE n 1 169 SER n 1 170 ASP n 1 171 ILE n 1 172 CYS n 1 173 PRO n 1 174 LYS n 1 175 LYS n 1 176 ASP n 1 177 VAL n 1 178 LEU n 1 179 GLU n 1 180 SER n 1 181 CYS n 1 182 PRO n 1 183 ASP n 1 184 ALA n 1 185 ILE n 1 186 LYS n 1 187 GLU n 1 188 VAL n 1 189 PHE n 1 190 ASP n 1 191 ASN n 1 192 LYS n 1 193 PHE n 1 194 HIS n 1 195 ILE n 1 196 ILE n 1 197 GLY n 1 198 ALA n 1 199 VAL n 1 200 GLY n 1 201 ILE n 1 202 GLY n 1 203 ILE n 1 204 ALA n 1 205 VAL n 1 206 VAL n 1 207 MET n 1 208 ILE n 1 209 PHE n 1 210 GLY n 1 211 MET n 1 212 ILE n 1 213 PHE n 1 214 SER n 1 215 MET n 1 216 ILE n 1 217 LEU n 1 218 CYS n 1 219 CYS n 1 220 ALA n 1 221 ILE n 1 222 ARG n 1 223 ARG n 1 224 ASN n 1 225 ARG n 1 226 GLU n 1 227 MET n 1 228 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 228 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CD9, MIC3, TSPAN29, GIG2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Sf9 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector pFastBac _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CD9_HUMAN _struct_ref.pdbx_db_accession P21926 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCG AVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGVE QFISDICPKKDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRNREMV ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6K4J _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 228 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P21926 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 228 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 228 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6K4J GLY A 1 ? UNP P21926 ? ? 'expression tag' -4 1 1 6K4J SER A 2 ? UNP P21926 ? ? 'expression tag' -3 2 1 6K4J ARG A 3 ? UNP P21926 ? ? 'expression tag' -2 3 1 6K4J GLU A 4 ? UNP P21926 ? ? 'expression tag' -1 4 1 6K4J PHE A 5 ? UNP P21926 ? ? 'expression tag' 0 5 1 6K4J ? A ? ? UNP P21926 THR 175 deletion ? 6 1 6K4J ? A ? ? UNP P21926 PHE 176 deletion ? 7 1 6K4J ? A ? ? UNP P21926 THR 177 deletion ? 8 1 6K4J ? A ? ? UNP P21926 VAL 178 deletion ? 9 1 6K4J ? A ? ? UNP P21926 LYS 179 deletion ? 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 OLC non-polymer . '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 1-Oleoyl-R-glycerol 'C21 H40 O4' 356.540 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PLM non-polymer . 'PALMITIC ACID' ? 'C16 H32 O2' 256.424 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6K4J _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.73 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 67.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'LIPIDIC CUBIC PHASE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 200' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-09-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 54.660 _reflns.entry_id 6K4J _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.700 _reflns.d_resolution_low 42.498 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10431 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 57.932 _reflns.pdbx_Rmerge_I_obs 0.0513 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.830 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.184 _reflns.pdbx_scaling_rejects 364 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.518 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 604284 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 2.700 2.860 ? 1.700 ? 97042 1623 ? 1623 100.000 ? ? ? ? 3.135 ? ? ? ? ? ? ? ? 59.792 ? ? ? ? 3.162 ? ? 1 1 0.513 ? ? 2.860 3.060 ? 2.330 ? 92409 1567 ? 1567 100.000 ? ? ? ? 2.521 ? ? ? ? ? ? ? ? 58.972 ? ? ? ? 2.543 ? ? 2 1 0.754 ? ? 3.060 3.310 ? 3.680 ? 86650 1503 ? 1503 100.000 ? ? ? ? 1.632 ? ? ? ? ? ? ? ? 57.651 ? ? ? ? 1.646 ? ? 3 1 0.895 ? ? 3.310 3.620 ? 7.230 ? 74245 1301 ? 1301 100.000 ? ? ? ? 0.920 ? ? ? ? ? ? ? ? 57.068 ? ? ? ? 0.928 ? ? 4 1 0.965 ? ? 3.620 4.050 ? 16.660 ? 71508 1240 ? 1240 100.000 ? ? ? ? 0.417 ? ? ? ? ? ? ? ? 57.668 ? ? ? ? 0.421 ? ? 5 1 0.991 ? ? 4.050 4.670 ? 30.980 ? 64572 1080 ? 1080 100.000 ? ? ? ? 0.223 ? ? ? ? ? ? ? ? 59.789 ? ? ? ? 0.225 ? ? 6 1 0.998 ? ? 4.670 5.720 ? 34.270 ? 53551 940 ? 940 100.000 ? ? ? ? 0.186 ? ? ? ? ? ? ? ? 56.969 ? ? ? ? 0.188 ? ? 7 1 0.998 ? ? 5.720 8.080 ? 38.960 ? 39282 739 ? 739 100.000 ? ? ? ? 0.153 ? ? ? ? ? ? ? ? 53.156 ? ? ? ? 0.154 ? ? 8 1 0.999 ? ? 8.080 42.498 ? 65.520 ? 25025 442 ? 438 99.100 ? ? ? ? 0.097 ? ? ? ? ? ? ? ? 57.135 ? ? ? ? 0.098 ? ? 9 1 0.999 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 124.940 _refine.B_iso_mean 58.6986 _refine.B_iso_min 30.230 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6K4J _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.7010 _refine.ls_d_res_low 42.498 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10429 _refine.ls_number_reflns_R_free 1043 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6200 _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2647 _refine.ls_R_factor_R_free 0.2889 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2620 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.380 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.3000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4800 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.7010 _refine_hist.d_res_low 42.498 _refine_hist.number_atoms_solvent 13 _refine_hist.number_atoms_total 1716 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 220 _refine_hist.pdbx_B_iso_mean_ligand 68.22 _refine_hist.pdbx_B_iso_mean_solvent 49.78 _refine_hist.pdbx_number_atoms_protein 1673 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.7005 2.8429 . . 142 1278 97.0000 . . . 0.4228 0.0000 0.3370 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8429 3.0210 . . 147 1329 100.0000 . . . 0.3402 0.0000 0.2924 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0210 3.2541 . . 147 1316 100.0000 . . . 0.3454 0.0000 0.2944 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2541 3.5815 . . 147 1325 100.0000 . . . 0.3305 0.0000 0.2697 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5815 4.0993 . . 151 1351 100.0000 . . . 0.2662 0.0000 0.2476 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0993 5.1633 . . 150 1363 100.0000 . . . 0.2561 0.0000 0.2451 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.1633 42.4980 . . 159 1424 100.0000 . . . 0.2571 0.0000 0.2499 . . . . . . . . . . . # _struct.entry_id 6K4J _struct.title 'Crystal Structure of the the CD9' _struct.pdbx_descriptor 'CD9 antigen' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6K4J _struct_keywords.text 'membrane protein' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 9 ? ASP A 43 ? LYS A 4 ASP A 38 1 ? 35 HELX_P HELX_P2 AA2 GLN A 45 ? GLU A 51 ? GLN A 40 GLU A 46 5 ? 7 HELX_P HELX_P3 AA3 SER A 59 ? GLN A 88 ? SER A 54 GLN A 83 1 ? 30 HELX_P HELX_P4 AA4 SER A 90 ? SER A 117 ? SER A 85 SER A 112 1 ? 28 HELX_P HELX_P5 AA5 HIS A 118 ? THR A 139 ? HIS A 113 THR A 134 1 ? 22 HELX_P HELX_P6 AA6 ASP A 141 ? ASN A 156 ? ASP A 136 ASN A 151 1 ? 16 HELX_P HELX_P7 AA7 ALA A 161 ? ILE A 168 ? ALA A 156 ILE A 163 5 ? 8 HELX_P HELX_P8 AA8 SER A 180 ? LYS A 192 ? SER A 180 LYS A 192 1 ? 13 HELX_P HELX_P9 AA9 LYS A 192 ? ARG A 223 ? LYS A 192 ARG A 223 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 157 SG ? ? ? 1_555 A CYS 181 SG ? ? A CYS 152 A CYS 181 1_555 ? ? ? ? ? ? ? 2.030 ? disulf2 disulf ? ? A CYS 158 SG ? ? ? 1_555 A CYS 172 SG ? ? A CYS 153 A CYS 167 1_555 ? ? ? ? ? ? ? 2.029 ? metalc1 metalc ? ? A GLU 179 OE1 ? ? ? 1_555 D NI . NI ? ? A GLU 174 A NI 303 1_555 ? ? ? ? ? ? ? 2.013 ? metalc2 metalc ? ? A GLU 179 OE2 ? ? ? 1_555 D NI . NI ? ? A GLU 174 A NI 303 1_555 ? ? ? ? ? ? ? 2.399 ? metalc3 metalc ? ? A GLU 187 OE1 ? ? ? 1_555 D NI . NI ? ? A GLU 187 A NI 303 1_555 ? ? ? ? ? ? ? 1.900 ? metalc4 metalc ? ? A GLU 187 OE2 ? ? ? 1_555 D NI . NI ? ? A GLU 187 A NI 303 1_555 ? ? ? ? ? ? ? 2.163 ? metalc5 metalc ? ? A HIS 118 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 113 A NI 303 8_456 ? ? ? ? ? ? ? 2.004 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PLM 301 ? 1 'binding site for residue PLM A 301' AC2 Software A OLC 302 ? 3 'binding site for residue OLC A 302' AC3 Software A NI 303 ? 3 'binding site for residue NI A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 CYS A 219 ? CYS A 219 . ? 1_555 ? 2 AC2 3 ARG A 41 ? ARG A 36 . ? 1_555 ? 3 AC2 3 TYR A 66 ? TYR A 61 . ? 1_555 ? 4 AC2 3 HOH E . ? HOH A 402 . ? 1_555 ? 5 AC3 3 HIS A 118 ? HIS A 113 . ? 8_556 ? 6 AC3 3 GLU A 179 ? GLU A 174 . ? 1_555 ? 7 AC3 3 GLU A 187 ? GLU A 187 . ? 1_555 ? # _atom_sites.entry_id 6K4J _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.022134 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007987 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007728 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N NI O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 SER 2 -3 ? ? ? A . n A 1 3 ARG 3 -2 ? ? ? A . n A 1 4 GLU 4 -1 ? ? ? A . n A 1 5 PHE 5 0 ? ? ? A . n A 1 6 MET 6 1 1 MET MET A . n A 1 7 PRO 7 2 2 PRO PRO A . n A 1 8 VAL 8 3 3 VAL VAL A . n A 1 9 LYS 9 4 4 LYS LYS A . n A 1 10 GLY 10 5 5 GLY GLY A . n A 1 11 GLY 11 6 6 GLY GLY A . n A 1 12 THR 12 7 7 THR THR A . n A 1 13 LYS 13 8 8 LYS LYS A . n A 1 14 CYS 14 9 9 CYS CYS A . n A 1 15 ILE 15 10 10 ILE ILE A . n A 1 16 LYS 16 11 11 LYS LYS A . n A 1 17 TYR 17 12 12 TYR TYR A . n A 1 18 LEU 18 13 13 LEU LEU A . n A 1 19 LEU 19 14 14 LEU LEU A . n A 1 20 PHE 20 15 15 PHE PHE A . n A 1 21 GLY 21 16 16 GLY GLY A . n A 1 22 PHE 22 17 17 PHE PHE A . n A 1 23 ASN 23 18 18 ASN ASN A . n A 1 24 PHE 24 19 19 PHE PHE A . n A 1 25 ILE 25 20 20 ILE ILE A . n A 1 26 PHE 26 21 21 PHE PHE A . n A 1 27 TRP 27 22 22 TRP TRP A . n A 1 28 LEU 28 23 23 LEU LEU A . n A 1 29 ALA 29 24 24 ALA ALA A . n A 1 30 GLY 30 25 25 GLY GLY A . n A 1 31 ILE 31 26 26 ILE ILE A . n A 1 32 ALA 32 27 27 ALA ALA A . n A 1 33 VAL 33 28 28 VAL VAL A . n A 1 34 LEU 34 29 29 LEU LEU A . n A 1 35 ALA 35 30 30 ALA ALA A . n A 1 36 ILE 36 31 31 ILE ILE A . n A 1 37 GLY 37 32 32 GLY GLY A . n A 1 38 LEU 38 33 33 LEU LEU A . n A 1 39 TRP 39 34 34 TRP TRP A . n A 1 40 LEU 40 35 35 LEU LEU A . n A 1 41 ARG 41 36 36 ARG ARG A . n A 1 42 PHE 42 37 37 PHE PHE A . n A 1 43 ASP 43 38 38 ASP ASP A . n A 1 44 SER 44 39 39 SER SER A . n A 1 45 GLN 45 40 40 GLN GLN A . n A 1 46 THR 46 41 41 THR THR A . n A 1 47 LYS 47 42 42 LYS LYS A . n A 1 48 SER 48 43 43 SER SER A . n A 1 49 ILE 49 44 44 ILE ILE A . n A 1 50 PHE 50 45 45 PHE PHE A . n A 1 51 GLU 51 46 46 GLU GLU A . n A 1 52 GLN 52 47 47 GLN GLN A . n A 1 53 GLU 53 48 48 GLU GLU A . n A 1 54 THR 54 49 49 THR THR A . n A 1 55 ASN 55 50 50 ASN ASN A . n A 1 56 ASN 56 51 51 ASN ASN A . n A 1 57 ASN 57 52 52 ASN ASN A . n A 1 58 ASN 58 53 53 ASN ASN A . n A 1 59 SER 59 54 54 SER SER A . n A 1 60 SER 60 55 55 SER SER A . n A 1 61 PHE 61 56 56 PHE PHE A . n A 1 62 TYR 62 57 57 TYR TYR A . n A 1 63 THR 63 58 58 THR THR A . n A 1 64 GLY 64 59 59 GLY GLY A . n A 1 65 VAL 65 60 60 VAL VAL A . n A 1 66 TYR 66 61 61 TYR TYR A . n A 1 67 ILE 67 62 62 ILE ILE A . n A 1 68 LEU 68 63 63 LEU LEU A . n A 1 69 ILE 69 64 64 ILE ILE A . n A 1 70 GLY 70 65 65 GLY GLY A . n A 1 71 ALA 71 66 66 ALA ALA A . n A 1 72 GLY 72 67 67 GLY GLY A . n A 1 73 ALA 73 68 68 ALA ALA A . n A 1 74 LEU 74 69 69 LEU LEU A . n A 1 75 MET 75 70 70 MET MET A . n A 1 76 MET 76 71 71 MET MET A . n A 1 77 LEU 77 72 72 LEU LEU A . n A 1 78 VAL 78 73 73 VAL VAL A . n A 1 79 GLY 79 74 74 GLY GLY A . n A 1 80 PHE 80 75 75 PHE PHE A . n A 1 81 LEU 81 76 76 LEU LEU A . n A 1 82 GLY 82 77 77 GLY GLY A . n A 1 83 CYS 83 78 78 CYS CYS A . n A 1 84 CYS 84 79 79 CYS CYS A . n A 1 85 GLY 85 80 80 GLY GLY A . n A 1 86 ALA 86 81 81 ALA ALA A . n A 1 87 VAL 87 82 82 VAL VAL A . n A 1 88 GLN 88 83 83 GLN GLN A . n A 1 89 GLU 89 84 84 GLU GLU A . n A 1 90 SER 90 85 85 SER SER A . n A 1 91 GLN 91 86 86 GLN GLN A . n A 1 92 CYS 92 87 87 CYS CYS A . n A 1 93 MET 93 88 88 MET MET A . n A 1 94 LEU 94 89 89 LEU LEU A . n A 1 95 GLY 95 90 90 GLY GLY A . n A 1 96 LEU 96 91 91 LEU LEU A . n A 1 97 PHE 97 92 92 PHE PHE A . n A 1 98 PHE 98 93 93 PHE PHE A . n A 1 99 GLY 99 94 94 GLY GLY A . n A 1 100 PHE 100 95 95 PHE PHE A . n A 1 101 LEU 101 96 96 LEU LEU A . n A 1 102 LEU 102 97 97 LEU LEU A . n A 1 103 VAL 103 98 98 VAL VAL A . n A 1 104 ILE 104 99 99 ILE ILE A . n A 1 105 PHE 105 100 100 PHE PHE A . n A 1 106 ALA 106 101 101 ALA ALA A . n A 1 107 ILE 107 102 102 ILE ILE A . n A 1 108 GLU 108 103 103 GLU GLU A . n A 1 109 ILE 109 104 104 ILE ILE A . n A 1 110 ALA 110 105 105 ALA ALA A . n A 1 111 ALA 111 106 106 ALA ALA A . n A 1 112 ALA 112 107 107 ALA ALA A . n A 1 113 ILE 113 108 108 ILE ILE A . n A 1 114 TRP 114 109 109 TRP TRP A . n A 1 115 GLY 115 110 110 GLY GLY A . n A 1 116 TYR 116 111 111 TYR TYR A . n A 1 117 SER 117 112 112 SER SER A . n A 1 118 HIS 118 113 113 HIS HIS A . n A 1 119 LYS 119 114 114 LYS LYS A . n A 1 120 ASP 120 115 115 ASP ASP A . n A 1 121 GLU 121 116 116 GLU GLU A . n A 1 122 VAL 122 117 117 VAL VAL A . n A 1 123 ILE 123 118 118 ILE ILE A . n A 1 124 LYS 124 119 119 LYS LYS A . n A 1 125 GLU 125 120 120 GLU GLU A . n A 1 126 VAL 126 121 121 VAL VAL A . n A 1 127 GLN 127 122 122 GLN GLN A . n A 1 128 GLU 128 123 123 GLU GLU A . n A 1 129 PHE 129 124 124 PHE PHE A . n A 1 130 TYR 130 125 125 TYR TYR A . n A 1 131 LYS 131 126 126 LYS LYS A . n A 1 132 ASP 132 127 127 ASP ASP A . n A 1 133 THR 133 128 128 THR THR A . n A 1 134 TYR 134 129 129 TYR TYR A . n A 1 135 ASN 135 130 130 ASN ASN A . n A 1 136 LYS 136 131 131 LYS LYS A . n A 1 137 LEU 137 132 132 LEU LEU A . n A 1 138 LYS 138 133 133 LYS LYS A . n A 1 139 THR 139 134 134 THR THR A . n A 1 140 LYS 140 135 135 LYS LYS A . n A 1 141 ASP 141 136 136 ASP ASP A . n A 1 142 GLU 142 137 137 GLU GLU A . n A 1 143 PRO 143 138 138 PRO PRO A . n A 1 144 GLN 144 139 139 GLN GLN A . n A 1 145 ARG 145 140 140 ARG ARG A . n A 1 146 GLU 146 141 141 GLU GLU A . n A 1 147 THR 147 142 142 THR THR A . n A 1 148 LEU 148 143 143 LEU LEU A . n A 1 149 LYS 149 144 144 LYS LYS A . n A 1 150 ALA 150 145 145 ALA ALA A . n A 1 151 ILE 151 146 146 ILE ILE A . n A 1 152 HIS 152 147 147 HIS HIS A . n A 1 153 TYR 153 148 148 TYR TYR A . n A 1 154 ALA 154 149 149 ALA ALA A . n A 1 155 LEU 155 150 150 LEU LEU A . n A 1 156 ASN 156 151 151 ASN ASN A . n A 1 157 CYS 157 152 152 CYS CYS A . n A 1 158 CYS 158 153 153 CYS CYS A . n A 1 159 GLY 159 154 154 GLY GLY A . n A 1 160 LEU 160 155 155 LEU LEU A . n A 1 161 ALA 161 156 156 ALA ALA A . n A 1 162 GLY 162 157 157 GLY GLY A . n A 1 163 GLY 163 158 158 GLY GLY A . n A 1 164 VAL 164 159 159 VAL VAL A . n A 1 165 GLU 165 160 160 GLU GLU A . n A 1 166 GLN 166 161 161 GLN GLN A . n A 1 167 PHE 167 162 162 PHE PHE A . n A 1 168 ILE 168 163 163 ILE ILE A . n A 1 169 SER 169 164 164 SER SER A . n A 1 170 ASP 170 165 165 ASP ASP A . n A 1 171 ILE 171 166 166 ILE ILE A . n A 1 172 CYS 172 167 167 CYS CYS A . n A 1 173 PRO 173 168 168 PRO PRO A . n A 1 174 LYS 174 169 169 LYS LYS A . n A 1 175 LYS 175 170 170 LYS LYS A . n A 1 176 ASP 176 171 171 ASP ASP A . n A 1 177 VAL 177 172 172 VAL VAL A . n A 1 178 LEU 178 173 173 LEU LEU A . n A 1 179 GLU 179 174 174 GLU GLU A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 CYS 181 181 181 CYS CYS A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 LYS 186 186 186 LYS LYS A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 PHE 189 189 189 PHE PHE A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 ASN 191 191 191 ASN ASN A . n A 1 192 LYS 192 192 192 LYS LYS A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 HIS 194 194 194 HIS HIS A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ALA 198 198 198 ALA ALA A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 MET 207 207 207 MET MET A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 PHE 209 209 209 PHE PHE A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 MET 211 211 211 MET MET A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 MET 215 215 215 MET MET A . n A 1 216 ILE 216 216 216 ILE ILE A . n A 1 217 LEU 217 217 217 LEU LEU A . n A 1 218 CYS 218 218 218 CYS CYS A . n A 1 219 CYS 219 219 219 CYS CYS A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 ILE 221 221 221 ILE ILE A . n A 1 222 ARG 222 222 222 ARG ARG A . n A 1 223 ARG 223 223 223 ARG ARG A . n A 1 224 ASN 224 224 224 ASN ASN A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 GLU 226 226 ? ? ? A . n A 1 227 MET 227 227 ? ? ? A . n A 1 228 VAL 228 228 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM 1 301 1 PLM PLM A . C 3 OLC 1 302 1 OLC OLC A . D 4 NI 1 303 1 NI NI A . E 5 HOH 1 401 7 HOH HOH A . E 5 HOH 2 402 6 HOH HOH A . E 5 HOH 3 403 8 HOH HOH A . E 5 HOH 4 404 18 HOH HOH A . E 5 HOH 5 405 5 HOH HOH A . E 5 HOH 6 406 4 HOH HOH A . E 5 HOH 7 407 13 HOH HOH A . E 5 HOH 8 408 15 HOH HOH A . E 5 HOH 9 409 16 HOH HOH A . E 5 HOH 10 410 11 HOH HOH A . E 5 HOH 11 411 14 HOH HOH A . E 5 HOH 12 412 17 HOH HOH A . E 5 HOH 13 413 9 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 400 ? 1 MORE -7 ? 1 'SSA (A^2)' 13330 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 179 ? A GLU 174 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 OE2 ? A GLU 179 ? A GLU 174 ? 1_555 59.0 ? 2 OE1 ? A GLU 179 ? A GLU 174 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 OE1 ? A GLU 187 ? A GLU 187 ? 1_555 116.4 ? 3 OE2 ? A GLU 179 ? A GLU 174 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 OE1 ? A GLU 187 ? A GLU 187 ? 1_555 122.7 ? 4 OE1 ? A GLU 179 ? A GLU 174 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 OE2 ? A GLU 187 ? A GLU 187 ? 1_555 129.0 ? 5 OE2 ? A GLU 179 ? A GLU 174 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 OE2 ? A GLU 187 ? A GLU 187 ? 1_555 77.5 ? 6 OE1 ? A GLU 187 ? A GLU 187 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 OE2 ? A GLU 187 ? A GLU 187 ? 1_555 65.1 ? 7 OE1 ? A GLU 179 ? A GLU 174 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 NE2 ? A HIS 118 ? A HIS 113 ? 1_555 98.9 ? 8 OE2 ? A GLU 179 ? A GLU 174 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 NE2 ? A HIS 118 ? A HIS 113 ? 1_555 87.3 ? 9 OE1 ? A GLU 187 ? A GLU 187 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 NE2 ? A HIS 118 ? A HIS 113 ? 1_555 35.5 ? 10 OE2 ? A GLU 187 ? A GLU 187 ? 1_555 NI ? D NI . ? A NI 303 ? 1_555 NE2 ? A HIS 118 ? A HIS 113 ? 1_555 50.7 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-05-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13_2998 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 6K4J _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 219 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 PLM _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.27 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 46 ? ? -129.05 -71.87 2 1 ASN A 52 ? ? 56.95 -140.65 3 1 ASP A 136 ? ? -103.97 -155.94 4 1 LYS A 169 ? ? -80.35 31.14 5 1 LYS A 192 ? ? -148.89 17.16 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 4 ? CG ? A LYS 9 CG 2 1 Y 1 A LYS 4 ? CD ? A LYS 9 CD 3 1 Y 1 A LYS 4 ? CE ? A LYS 9 CE 4 1 Y 1 A LYS 4 ? NZ ? A LYS 9 NZ 5 1 Y 1 A GLN 47 ? CG ? A GLN 52 CG 6 1 Y 1 A GLN 47 ? CD ? A GLN 52 CD 7 1 Y 1 A GLN 47 ? OE1 ? A GLN 52 OE1 8 1 Y 1 A GLN 47 ? NE2 ? A GLN 52 NE2 9 1 Y 1 A ASN 51 ? CG ? A ASN 56 CG 10 1 Y 1 A ASN 51 ? OD1 ? A ASN 56 OD1 11 1 Y 1 A ASN 51 ? ND2 ? A ASN 56 ND2 12 1 Y 1 A ASN 52 ? CG ? A ASN 57 CG 13 1 Y 1 A ASN 52 ? OD1 ? A ASN 57 OD1 14 1 Y 1 A ASN 52 ? ND2 ? A ASN 57 ND2 15 1 Y 1 A LYS 114 ? CG ? A LYS 119 CG 16 1 Y 1 A LYS 114 ? CD ? A LYS 119 CD 17 1 Y 1 A LYS 114 ? CE ? A LYS 119 CE 18 1 Y 1 A LYS 114 ? NZ ? A LYS 119 NZ 19 1 Y 1 A LYS 144 ? CG ? A LYS 149 CG 20 1 Y 1 A LYS 144 ? CD ? A LYS 149 CD 21 1 Y 1 A LYS 144 ? CE ? A LYS 149 CE 22 1 Y 1 A LYS 144 ? NZ ? A LYS 149 NZ 23 1 Y 1 A SER 164 ? OG ? A SER 169 OG 24 1 Y 1 A LYS 169 ? CG ? A LYS 174 CG 25 1 Y 1 A LYS 169 ? CD ? A LYS 174 CD 26 1 Y 1 A LYS 169 ? CE ? A LYS 174 CE 27 1 Y 1 A LYS 169 ? NZ ? A LYS 174 NZ 28 1 Y 1 A ASP 171 ? CG ? A ASP 176 CG 29 1 Y 1 A ASP 171 ? OD1 ? A ASP 176 OD1 30 1 Y 1 A ASP 171 ? OD2 ? A ASP 176 OD2 31 1 Y 1 A LYS 186 ? CG ? A LYS 186 CG 32 1 Y 1 A LYS 186 ? CD ? A LYS 186 CD 33 1 Y 1 A LYS 186 ? CE ? A LYS 186 CE 34 1 Y 1 A LYS 186 ? NZ ? A LYS 186 NZ 35 1 Y 1 A LYS 192 ? CG ? A LYS 192 CG 36 1 Y 1 A LYS 192 ? CD ? A LYS 192 CD 37 1 Y 1 A LYS 192 ? CE ? A LYS 192 CE 38 1 Y 1 A LYS 192 ? NZ ? A LYS 192 NZ 39 1 Y 1 A PHE 193 ? CG ? A PHE 193 CG 40 1 Y 1 A PHE 193 ? CD1 ? A PHE 193 CD1 41 1 Y 1 A PHE 193 ? CD2 ? A PHE 193 CD2 42 1 Y 1 A PHE 193 ? CE1 ? A PHE 193 CE1 43 1 Y 1 A PHE 193 ? CE2 ? A PHE 193 CE2 44 1 Y 1 A PHE 193 ? CZ ? A PHE 193 CZ 45 1 N 1 A PLM 301 ? O1 ? B PLM 1 O1 46 1 N 1 A PLM 301 ? CD ? B PLM 1 CD 47 1 N 1 A PLM 301 ? CE ? B PLM 1 CE 48 1 N 1 A PLM 301 ? CF ? B PLM 1 CF 49 1 N 1 A PLM 301 ? CG ? B PLM 1 CG 50 1 N 1 A OLC 302 ? C18 ? C OLC 1 C18 51 1 N 1 A OLC 302 ? C10 ? C OLC 1 C10 52 1 N 1 A OLC 302 ? C17 ? C OLC 1 C17 53 1 N 1 A OLC 302 ? C11 ? C OLC 1 C11 54 1 N 1 A OLC 302 ? C16 ? C OLC 1 C16 55 1 N 1 A OLC 302 ? C12 ? C OLC 1 C12 56 1 N 1 A OLC 302 ? C15 ? C OLC 1 C15 57 1 N 1 A OLC 302 ? C13 ? C OLC 1 C13 58 1 N 1 A OLC 302 ? C14 ? C OLC 1 C14 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A SER -3 ? A SER 2 3 1 Y 1 A ARG -2 ? A ARG 3 4 1 Y 1 A GLU -1 ? A GLU 4 5 1 Y 1 A PHE 0 ? A PHE 5 6 1 Y 1 A GLU 226 ? A GLU 226 7 1 Y 1 A MET 227 ? A MET 227 8 1 Y 1 A VAL 228 ? A VAL 228 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PALMITIC ACID' PLM 3 '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' OLC 4 'NICKEL (II) ION' NI 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #