HEADER IMMUNE SYSTEM 27-MAY-19 6K4Z TITLE SINGLE-CHAIN FV ANTIBODY OF C6 COMPLEXED WITH 2-(4-HYDROXY-3- TITLE 2 NITROPHENYL)ACETIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: SCFV OF C6; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THE FUSION PROTEIN OF EXPRESSION TAGS (RESIDUES -2-0), COMPND 6 THE LIGHT CHAIN (RESIDUES 1-108), LINKER GGGGSGGGGSGGGGS (RESIDUES COMPND 7 501-515), AND THE HEAVY CHAIN (RESIDUES 1001-1113) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_TAXID: 10090; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: CODON PLUS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-32TH KEYWDS ANTIGEN BINDING, AFFINITY MATURATION, SOMATIC HYPERMUTATION, KEYWDS 2 CONFORMATIONAL CHANGE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.NISHIGUCHI,N.NUMOTO,N.ITO,T.AZUMA,M.ODA REVDAT 3 22-NOV-23 6K4Z 1 REMARK REVDAT 2 02-OCT-19 6K4Z 1 JRNL REVDAT 1 18-SEP-19 6K4Z 0 JRNL AUTH A.NISHIGUCHI,N.NUMOTO,N.ITO,T.AZUMA,M.ODA JRNL TITL THREE-DIMENSIONAL STRUCTURE OF A HIGH AFFINITY JRNL TITL 2 ANTI-(4-HYDROXY-3-NITROPHENYL)ACETYL ANTIBODY POSSESSING A JRNL TITL 3 GLYCINE RESIDUE AT POSITION 95 OF THE HEAVY CHAIN. JRNL REF MOL.IMMUNOL. V. 114 545 2019 JRNL REFN ISSN 0161-5890 JRNL PMID 31521018 JRNL DOI 10.1016/J.MOLIMM.2019.09.001 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 52622 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 2600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3000 - 4.4000 0.98 2676 136 0.1511 0.1675 REMARK 3 2 4.4000 - 3.4900 0.98 2685 154 0.1315 0.1595 REMARK 3 3 3.4900 - 3.0500 0.98 2685 146 0.1504 0.1481 REMARK 3 4 3.0500 - 2.7700 0.98 2669 140 0.1658 0.2114 REMARK 3 5 2.7700 - 2.5700 0.98 2684 137 0.1677 0.1725 REMARK 3 6 2.5700 - 2.4200 0.97 2652 144 0.1712 0.2094 REMARK 3 7 2.4200 - 2.3000 0.97 2670 147 0.1707 0.2258 REMARK 3 8 2.3000 - 2.2000 0.97 2627 139 0.1695 0.2395 REMARK 3 9 2.2000 - 2.1200 0.97 2647 126 0.1605 0.1885 REMARK 3 10 2.1200 - 2.0400 0.97 2659 141 0.1607 0.1867 REMARK 3 11 2.0400 - 1.9800 0.96 2598 137 0.1638 0.2024 REMARK 3 12 1.9800 - 1.9200 0.96 2649 126 0.1800 0.2149 REMARK 3 13 1.9200 - 1.8700 0.95 2581 143 0.1973 0.2387 REMARK 3 14 1.8700 - 1.8300 0.95 2638 146 0.2062 0.2638 REMARK 3 15 1.8300 - 1.7900 0.94 2528 116 0.2184 0.2723 REMARK 3 16 1.7900 - 1.7500 0.94 2615 143 0.2277 0.2571 REMARK 3 17 1.7500 - 1.7100 0.94 2566 132 0.2414 0.2849 REMARK 3 18 1.7100 - 1.6800 0.94 2638 116 0.2560 0.2860 REMARK 3 19 1.6800 - 1.6500 0.94 2555 131 0.2674 0.2988 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.173 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.158 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3642 REMARK 3 ANGLE : 0.865 4978 REMARK 3 CHIRALITY : 0.058 544 REMARK 3 PLANARITY : 0.006 629 REMARK 3 DIHEDRAL : 16.107 2118 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-MAY-19. REMARK 100 THE DEPOSITION ID IS D_1300012290. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1000 REMARK 200 MONOCHROMATOR : CRYO-COOLED CHANNEL-CUT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52628 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.58600 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3ET9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.14 M LITHIUM SULFATE MONOHYDRATE, REMARK 280 0.07 M TRIS HYDROCHLORIDE PH 8.5, 21% W/V POLYETHYLENE GLYCOL REMARK 280 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 ALA A 0 REMARK 465 GLN A 108 REMARK 465 GLY A 501 REMARK 465 GLY A 502 REMARK 465 GLY A 503 REMARK 465 GLY A 504 REMARK 465 SER A 505 REMARK 465 GLY A 506 REMARK 465 GLY A 507 REMARK 465 GLY A 508 REMARK 465 GLY A 509 REMARK 465 SER A 510 REMARK 465 GLY A 511 REMARK 465 GLY A 512 REMARK 465 GLY A 513 REMARK 465 GLY A 514 REMARK 465 SER A 515 REMARK 465 SER A 1113 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 ALA B 0 REMARK 465 GLN B 1 REMARK 465 GLN B 108 REMARK 465 GLY B 501 REMARK 465 GLY B 502 REMARK 465 GLY B 503 REMARK 465 GLY B 504 REMARK 465 SER B 505 REMARK 465 GLY B 506 REMARK 465 GLY B 507 REMARK 465 GLY B 508 REMARK 465 GLY B 509 REMARK 465 SER B 510 REMARK 465 GLY B 511 REMARK 465 GLY B 512 REMARK 465 GLY B 513 REMARK 465 GLY B 514 REMARK 465 SER B 515 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 51 -56.04 76.87 REMARK 500 ASN A 52 13.79 -140.13 REMARK 500 TYR A 92 67.14 -119.89 REMARK 500 SER A 93 -43.46 71.61 REMARK 500 ASN A 94 13.00 -147.88 REMARK 500 LYS A1096 166.56 176.25 REMARK 500 GLN A1100 94.17 -161.36 REMARK 500 ASP B 41 36.18 76.67 REMARK 500 THR B 51 -56.73 75.49 REMARK 500 ASN B 52 15.40 -143.62 REMARK 500 LYS B1066 -52.40 -122.51 REMARK 500 GLN B1100 93.20 -161.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NPA A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NPA B 1201 DBREF 6K4Z A -2 1113 PDB 6K4Z 6K4Z -2 1113 DBREF 6K4Z B -2 1113 PDB 6K4Z 6K4Z -2 1113 SEQRES 1 A 247 GLY SER ALA GLN ALA VAL VAL THR GLN GLU SER ALA LEU SEQRES 2 A 247 THR THR SER PRO GLY GLU THR VAL THR LEU THR CYS ARG SEQRES 3 A 247 SER SER THR GLY ALA VAL THR THR SER ASN TYR VAL ASN SEQRES 4 A 247 TRP VAL GLN GLU LYS PRO ASP HIS LEU PHE THR GLY LEU SEQRES 5 A 247 VAL TYR SER THR ASN SER ARG VAL PRO GLY VAL PRO ALA SEQRES 6 A 247 ARG PHE SER GLY SER LEU ILE GLY ASP LYS ALA ALA LEU SEQRES 7 A 247 THR ILE THR GLY ALA GLN ALA GLU ASP GLU ALA ILE TYR SEQRES 8 A 247 PHE CYS THR LEU TRP TYR SER ASN HIS TRP VAL PHE GLY SEQRES 9 A 247 GLY GLY THR LYS LEU THR VAL LEU GLY GLN GLY GLY GLY SEQRES 10 A 247 GLY SER GLY GLY GLY GLY SER GLY GLY GLY GLY SER GLN SEQRES 11 A 247 VAL GLN LEU GLN GLN PRO GLY ALA GLU LEU VAL LYS PRO SEQRES 12 A 247 GLY ALA SER VAL LYS LEU SER CYS LYS THR SER GLY TYR SEQRES 13 A 247 THR PHE PRO TYR TYR TRP MET HIS TRP VAL ASN GLN ARG SEQRES 14 A 247 PRO GLY ARG GLY LEU GLU TRP ILE GLY ARG ILE ASP PRO SEQRES 15 A 247 ASN GLY GLY GLY THR ARG TYR SER GLU LYS PHE LYS SER SEQRES 16 A 247 LYS ALA THR LEU THR VAL ASP LYS PRO SER ASN THR ALA SEQRES 17 A 247 TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER ALA SEQRES 18 A 247 VAL TYR TYR CYS ALA ARG GLY LYS LEU GLY GLN HIS PHE SEQRES 19 A 247 ASP TYR TRP GLY GLN GLY THR ALA LEU THR VAL SER SER SEQRES 1 B 247 GLY SER ALA GLN ALA VAL VAL THR GLN GLU SER ALA LEU SEQRES 2 B 247 THR THR SER PRO GLY GLU THR VAL THR LEU THR CYS ARG SEQRES 3 B 247 SER SER THR GLY ALA VAL THR THR SER ASN TYR VAL ASN SEQRES 4 B 247 TRP VAL GLN GLU LYS PRO ASP HIS LEU PHE THR GLY LEU SEQRES 5 B 247 VAL TYR SER THR ASN SER ARG VAL PRO GLY VAL PRO ALA SEQRES 6 B 247 ARG PHE SER GLY SER LEU ILE GLY ASP LYS ALA ALA LEU SEQRES 7 B 247 THR ILE THR GLY ALA GLN ALA GLU ASP GLU ALA ILE TYR SEQRES 8 B 247 PHE CYS THR LEU TRP TYR SER ASN HIS TRP VAL PHE GLY SEQRES 9 B 247 GLY GLY THR LYS LEU THR VAL LEU GLY GLN GLY GLY GLY SEQRES 10 B 247 GLY SER GLY GLY GLY GLY SER GLY GLY GLY GLY SER GLN SEQRES 11 B 247 VAL GLN LEU GLN GLN PRO GLY ALA GLU LEU VAL LYS PRO SEQRES 12 B 247 GLY ALA SER VAL LYS LEU SER CYS LYS THR SER GLY TYR SEQRES 13 B 247 THR PHE PRO TYR TYR TRP MET HIS TRP VAL ASN GLN ARG SEQRES 14 B 247 PRO GLY ARG GLY LEU GLU TRP ILE GLY ARG ILE ASP PRO SEQRES 15 B 247 ASN GLY GLY GLY THR ARG TYR SER GLU LYS PHE LYS SER SEQRES 16 B 247 LYS ALA THR LEU THR VAL ASP LYS PRO SER ASN THR ALA SEQRES 17 B 247 TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER ALA SEQRES 18 B 247 VAL TYR TYR CYS ALA ARG GLY LYS LEU GLY GLN HIS PHE SEQRES 19 B 247 ASP TYR TRP GLY GLN GLY THR ALA LEU THR VAL SER SER HET NPA A1201 14 HET SO4 A1202 5 HET GOL A1203 6 HET NPA B1201 14 HETNAM NPA 2-(4-HYDROXY-3-NITROPHENYL)ACETIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NPA 2(C8 H7 N O5) FORMUL 4 SO4 O4 S 2- FORMUL 5 GOL C3 H8 O3 FORMUL 7 HOH *542(H2 O) HELIX 1 AA1 THR A 28 TYR A 32 5 5 HELIX 2 AA2 GLN A 79 GLU A 83 5 5 HELIX 3 AA3 THR A 1028 TYR A 1032 5 5 HELIX 4 AA4 GLU A 1061 LYS A 1064 5 4 HELIX 5 AA5 LYS A 1073 SER A 1075 5 3 HELIX 6 AA6 THR A 1083 SER A 1087 5 5 HELIX 7 AA7 THR B 28 TYR B 32 5 5 HELIX 8 AA8 GLN B 79 GLU B 83 5 5 HELIX 9 AA9 THR B 1028 TYR B 1032 5 5 HELIX 10 AB1 GLU B 1061 LYS B 1064 5 4 HELIX 11 AB2 THR B 1083 SER B 1087 5 5 SHEET 1 AA1 4 VAL A 4 GLN A 6 0 SHEET 2 AA1 4 THR A 18 SER A 25 -1 O ARG A 24 N THR A 5 SHEET 3 AA1 4 LYS A 70 THR A 76 -1 O LEU A 73 N LEU A 21 SHEET 4 AA1 4 PHE A 62 ILE A 67 -1 N SER A 63 O THR A 74 SHEET 1 AA2 6 ALA A 9 THR A 13 0 SHEET 2 AA2 6 THR A 102 VAL A 106 1 O THR A 105 N THR A 13 SHEET 3 AA2 6 ALA A 84 TRP A 91 -1 N ALA A 84 O LEU A 104 SHEET 4 AA2 6 ASN A 34 LYS A 39 -1 N GLU A 38 O ILE A 85 SHEET 5 AA2 6 LEU A 43 TYR A 49 -1 O THR A 45 N GLN A 37 SHEET 6 AA2 6 SER A 53 ARG A 54 -1 O SER A 53 N TYR A 49 SHEET 1 AA3 4 ALA A 9 THR A 13 0 SHEET 2 AA3 4 THR A 102 VAL A 106 1 O THR A 105 N THR A 13 SHEET 3 AA3 4 ALA A 84 TRP A 91 -1 N ALA A 84 O LEU A 104 SHEET 4 AA3 4 TRP A 96 PHE A 98 -1 O VAL A 97 N LEU A 90 SHEET 1 AA4 4 GLN A1003 GLN A1005 0 SHEET 2 AA4 4 VAL A1018 SER A1025 -1 O LYS A1023 N GLN A1005 SHEET 3 AA4 4 THR A1077 LEU A1082 -1 O MET A1080 N LEU A1020 SHEET 4 AA4 4 ALA A1067 ASP A1072 -1 N THR A1070 O TYR A1079 SHEET 1 AA5 6 ALA A1009 VAL A1012 0 SHEET 2 AA5 6 THR A1107 VAL A1111 1 O THR A1110 N GLU A1010 SHEET 3 AA5 6 ALA A1088 GLY A1095 -1 N ALA A1088 O LEU A1109 SHEET 4 AA5 6 TRP A1033 GLN A1039 -1 N HIS A1035 O ALA A1093 SHEET 5 AA5 6 LEU A1045 ILE A1051 -1 O ILE A1048 N TRP A1036 SHEET 6 AA5 6 THR A1057 TYR A1059 -1 O ARG A1058 N ARG A1050 SHEET 1 AA6 4 VAL B 4 GLN B 6 0 SHEET 2 AA6 4 THR B 18 SER B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AA6 4 LYS B 70 THR B 76 -1 O ILE B 75 N VAL B 19 SHEET 4 AA6 4 PHE B 62 ILE B 67 -1 N SER B 65 O ALA B 72 SHEET 1 AA7 6 ALA B 9 THR B 13 0 SHEET 2 AA7 6 THR B 102 VAL B 106 1 O THR B 105 N THR B 13 SHEET 3 AA7 6 ALA B 84 TYR B 92 -1 N ALA B 84 O LEU B 104 SHEET 4 AA7 6 ASN B 34 LYS B 39 -1 N GLU B 38 O ILE B 85 SHEET 5 AA7 6 LEU B 43 TYR B 49 -1 O THR B 45 N GLN B 37 SHEET 6 AA7 6 SER B 53 ARG B 54 -1 O SER B 53 N TYR B 49 SHEET 1 AA8 4 ALA B 9 THR B 13 0 SHEET 2 AA8 4 THR B 102 VAL B 106 1 O THR B 105 N THR B 13 SHEET 3 AA8 4 ALA B 84 TYR B 92 -1 N ALA B 84 O LEU B 104 SHEET 4 AA8 4 HIS B 95 PHE B 98 -1 O HIS B 95 N TYR B 92 SHEET 1 AA9 4 GLN B1003 GLN B1005 0 SHEET 2 AA9 4 VAL B1018 SER B1025 -1 O LYS B1023 N GLN B1005 SHEET 3 AA9 4 THR B1077 LEU B1082 -1 O MET B1080 N LEU B1020 SHEET 4 AA9 4 ALA B1067 ASP B1072 -1 N ASP B1072 O THR B1077 SHEET 1 AB1 6 ALA B1009 VAL B1012 0 SHEET 2 AB1 6 THR B1107 VAL B1111 1 O THR B1110 N GLU B1010 SHEET 3 AB1 6 ALA B1088 GLY B1095 -1 N ALA B1088 O LEU B1109 SHEET 4 AB1 6 TRP B1033 GLN B1039 -1 N HIS B1035 O ALA B1093 SHEET 5 AB1 6 LEU B1045 ILE B1051 -1 O ILE B1048 N TRP B1036 SHEET 6 AB1 6 THR B1057 TYR B1059 -1 O ARG B1058 N ARG B1050 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.03 SSBOND 2 CYS A 1022 CYS A 1092 1555 1555 2.04 SSBOND 3 CYS B 23 CYS B 88 1555 1555 2.05 SSBOND 4 CYS B 1022 CYS B 1092 1555 1555 2.04 SITE 1 AC1 12 TYR A 32 TRP A 91 TRP A 96 TRP A1033 SITE 2 AC1 12 HIS A1035 ARG A1050 ARG A1058 LEU A1097 SITE 3 AC1 12 GLY A1099 HIS A1100A HOH A1328 HOH A1393 SITE 1 AC2 7 GLU A 7 SER A 8 HOH A1304 HOH A1325 SITE 2 AC2 7 ARG B1040 ARG B1043 GLU B1085 SITE 1 AC3 10 PRO A1041 ALA A1088 VAL A1089 ALA A1108 SITE 2 AC3 10 LEU A1109 THR A1110 HOH A1352 HOH A1444 SITE 3 AC3 10 HOH A1462 HOH A1480 SITE 1 AC4 12 TYR B 32 TRP B 91 TRP B 96 TRP B1033 SITE 2 AC4 12 HIS B1035 ARG B1050 ARG B1058 LEU B1097 SITE 3 AC4 12 GLY B1099 HIS B1100A HOH B1337 HOH B1385 CRYST1 37.393 46.779 74.581 88.24 103.78 111.98 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026743 0.010796 0.007274 0.00000 SCALE2 0.000000 0.023053 0.001497 0.00000 SCALE3 0.000000 0.000000 0.013835 0.00000