data_6K5T # _entry.id 6K5T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6K5T WWPDB D_1300011938 BMRB 36260 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Complex of SUMO1 and phosphorylated hcmv protein IE2' _pdbx_database_related.db_id 36260 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6K5T _pdbx_database_status.recvd_initial_deposition_date 2019-05-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Tripathi, V.' 1 ? 'Chatterjee, K.S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 294 _citation.language ? _citation.page_first 14546 _citation.page_last 14561 _citation.title 'Casein kinase-2-mediated phosphorylation increases the SUMO-dependent activity of the cytomegalovirus transactivator IE2.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA119.009601 _citation.pdbx_database_id_PubMed 31371453 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tripathi, V.' 1 0000-0002-9438-5049 primary 'Chatterjee, K.S.' 2 0000-0002-0392-6779 primary 'Das, R.' 3 0000-0001-5114-6817 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Small ubiquitin-related modifier 1' 8970.248 1 ? ? ? ? 2 polymer syn '12-mer from Viral transcription factor IE2' 1369.241 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;SUMO-1,GAP-modifying protein 1,GMP1,SMT3 homolog 3,Sentrin,Ubiquitin-homology domain protein PIC1,Ubiquitin-like protein SMT3C,Smt3C,Ubiquitin-like protein UBL1 ; 2 'IE2,Protein UL122' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG A ? 2 'polypeptide(L)' no yes 'DTAGCIVI(SEP)D(SEP)E' DTAGCIVISDSE B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 ILE n 1 3 LYS n 1 4 LEU n 1 5 LYS n 1 6 VAL n 1 7 ILE n 1 8 GLY n 1 9 GLN n 1 10 ASP n 1 11 SER n 1 12 SER n 1 13 GLU n 1 14 ILE n 1 15 HIS n 1 16 PHE n 1 17 LYS n 1 18 VAL n 1 19 LYS n 1 20 MET n 1 21 THR n 1 22 THR n 1 23 HIS n 1 24 LEU n 1 25 LYS n 1 26 LYS n 1 27 LEU n 1 28 LYS n 1 29 GLU n 1 30 SER n 1 31 TYR n 1 32 CYS n 1 33 GLN n 1 34 ARG n 1 35 GLN n 1 36 GLY n 1 37 VAL n 1 38 PRO n 1 39 MET n 1 40 ASN n 1 41 SER n 1 42 LEU n 1 43 ARG n 1 44 PHE n 1 45 LEU n 1 46 PHE n 1 47 GLU n 1 48 GLY n 1 49 GLN n 1 50 ARG n 1 51 ILE n 1 52 ALA n 1 53 ASP n 1 54 ASN n 1 55 HIS n 1 56 THR n 1 57 PRO n 1 58 LYS n 1 59 GLU n 1 60 LEU n 1 61 GLY n 1 62 MET n 1 63 GLU n 1 64 GLU n 1 65 GLU n 1 66 ASP n 1 67 VAL n 1 68 ILE n 1 69 GLU n 1 70 VAL n 1 71 TYR n 1 72 GLN n 1 73 GLU n 1 74 GLN n 1 75 THR n 1 76 GLY n 1 77 GLY n 2 1 ASP n 2 2 THR n 2 3 ALA n 2 4 GLY n 2 5 CYS n 2 6 ILE n 2 7 VAL n 2 8 ILE n 2 9 SEP n 2 10 ASP n 2 11 SEP n 2 12 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 77 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SUMO1, SMT3C, SMT3H3, UBL1, OK/SW-cl.43' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'Human cytomegalovirus (strain AD169)' _pdbx_entity_src_syn.organism_common_name HHV-5 _pdbx_entity_src_syn.ncbi_taxonomy_id 10360 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SUMO1_HUMAN P63165 ? 1 YIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGG 21 2 UNP VIE2_HCMVA P19893 ? 2 DTAGCIVISDSE 195 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6K5T A 1 ? 77 ? P63165 21 ? 97 ? 21 97 2 2 6K5T B 1 ? 12 ? P19893 195 ? 206 ? 195 206 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SEP 'L-peptide linking' n PHOSPHOSERINE PHOSPHONOSERINE 'C3 H8 N O6 P' 185.072 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 2 '2D 1H-13C HSQC' 1 isotropic 3 1 3 '2D 1H-1H TOCSY' 1 isotropic 4 1 3 '2D 1H-1H NOESY' 1 isotropic 5 1 2 '3D half filtered NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.4 _pdbx_nmr_exptl_sample_conditions.ionic_strength 162.7 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label Codition_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.3 mM [U-13C; U-15N] SUMO1, 3 mM Phosphorylated SIM from viral protein IE2, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_sample solution 'PBS, pH 7.4' 2 '1 mM [U-13C; U-15N] SUMO1, 1.5 mM Phosphorylated SIM from viral protein IE2, 90% H2O/10% D2O' '90% H2O/10% D2O' 13C15N_sample solution 'PBS, pH 7.4' 3 '3 mM Phosphorylated SIM from viral protein IE2, 90% H2O/10% D2O' '90% H2O/10% D2O' 'Phosphorylated SIM from viral protein IE2' solution ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 6K5T _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 3 # _pdbx_nmr_ensemble.entry_id 6K5T _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6K5T _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 2 'data analysis' Sparky ? Goddard 3 'structure calculation' HADDOCK ? Bonvin # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6K5T _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6K5T _struct.title 'Complex of SUMO1 and phosphorylated hcmv protein IE2' _struct.pdbx_descriptor 'Small ubiquitin-related modifier 1, 12-mer from Viral transcription factor IE2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6K5T _struct_keywords.text 'Complex, VIRAL PROTEIN, PROTEIN BINDING-TRANSCRIPTION complex' _struct_keywords.pdbx_keywords 'PROTEIN BINDING/TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id HIS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 23 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 36 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id HIS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 43 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 56 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? B ILE 8 C ? ? ? 1_555 B SEP 9 N ? ? B ILE 202 B SEP 203 1_555 ? ? ? ? ? ? ? 1.318 ? covale2 covale both ? B SEP 9 C ? ? ? 1_555 B ASP 10 N ? ? B SEP 203 B ASP 204 1_555 ? ? ? ? ? ? ? 1.315 ? covale3 covale both ? B ASP 10 C ? ? ? 1_555 B SEP 11 N ? ? B ASP 204 B SEP 205 1_555 ? ? ? ? ? ? ? 1.307 ? covale4 covale both ? B SEP 11 C ? ? ? 1_555 B GLU 12 N ? ? B SEP 205 B GLU 206 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 49 ? ARG A 50 ? GLN A 69 ARG A 70 AA1 2 LEU A 42 ? PHE A 46 ? LEU A 62 PHE A 66 AA1 3 ASP A 66 ? GLN A 72 ? ASP A 86 GLN A 92 AA1 4 ILE A 2 ? ILE A 7 ? ILE A 22 ILE A 27 AA1 5 GLU A 13 ? VAL A 18 ? GLU A 33 VAL A 38 AA1 6 ALA B 3 ? VAL B 7 ? ALA B 197 VAL B 201 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLN A 49 ? O GLN A 69 N PHE A 46 ? N PHE A 66 AA1 2 3 N ARG A 43 ? N ARG A 63 O TYR A 71 ? O TYR A 91 AA1 3 4 O ASP A 66 ? O ASP A 86 N LYS A 5 ? N LYS A 25 AA1 4 5 N ILE A 2 ? N ILE A 22 O VAL A 18 ? O VAL A 38 AA1 5 6 N HIS A 15 ? N HIS A 35 O GLY B 4 ? O GLY B 198 # _atom_sites.entry_id 6K5T _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 21 21 TYR TYR A . n A 1 2 ILE 2 22 22 ILE ILE A . n A 1 3 LYS 3 23 23 LYS LYS A . n A 1 4 LEU 4 24 24 LEU LEU A . n A 1 5 LYS 5 25 25 LYS LYS A . n A 1 6 VAL 6 26 26 VAL VAL A . n A 1 7 ILE 7 27 27 ILE ILE A . n A 1 8 GLY 8 28 28 GLY GLY A . n A 1 9 GLN 9 29 29 GLN GLN A . n A 1 10 ASP 10 30 30 ASP ASP A . n A 1 11 SER 11 31 31 SER SER A . n A 1 12 SER 12 32 32 SER SER A . n A 1 13 GLU 13 33 33 GLU GLU A . n A 1 14 ILE 14 34 34 ILE ILE A . n A 1 15 HIS 15 35 35 HIS HIS A . n A 1 16 PHE 16 36 36 PHE PHE A . n A 1 17 LYS 17 37 37 LYS LYS A . n A 1 18 VAL 18 38 38 VAL VAL A . n A 1 19 LYS 19 39 39 LYS LYS A . n A 1 20 MET 20 40 40 MET MET A . n A 1 21 THR 21 41 41 THR THR A . n A 1 22 THR 22 42 42 THR THR A . n A 1 23 HIS 23 43 43 HIS HIS A . n A 1 24 LEU 24 44 44 LEU LEU A . n A 1 25 LYS 25 45 45 LYS LYS A . n A 1 26 LYS 26 46 46 LYS LYS A . n A 1 27 LEU 27 47 47 LEU LEU A . n A 1 28 LYS 28 48 48 LYS LYS A . n A 1 29 GLU 29 49 49 GLU GLU A . n A 1 30 SER 30 50 50 SER SER A . n A 1 31 TYR 31 51 51 TYR TYR A . n A 1 32 CYS 32 52 52 CYS CYS A . n A 1 33 GLN 33 53 53 GLN GLN A . n A 1 34 ARG 34 54 54 ARG ARG A . n A 1 35 GLN 35 55 55 GLN GLN A . n A 1 36 GLY 36 56 56 GLY GLY A . n A 1 37 VAL 37 57 57 VAL VAL A . n A 1 38 PRO 38 58 58 PRO PRO A . n A 1 39 MET 39 59 59 MET MET A . n A 1 40 ASN 40 60 60 ASN ASN A . n A 1 41 SER 41 61 61 SER SER A . n A 1 42 LEU 42 62 62 LEU LEU A . n A 1 43 ARG 43 63 63 ARG ARG A . n A 1 44 PHE 44 64 64 PHE PHE A . n A 1 45 LEU 45 65 65 LEU LEU A . n A 1 46 PHE 46 66 66 PHE PHE A . n A 1 47 GLU 47 67 67 GLU GLU A . n A 1 48 GLY 48 68 68 GLY GLY A . n A 1 49 GLN 49 69 69 GLN GLN A . n A 1 50 ARG 50 70 70 ARG ARG A . n A 1 51 ILE 51 71 71 ILE ILE A . n A 1 52 ALA 52 72 72 ALA ALA A . n A 1 53 ASP 53 73 73 ASP ASP A . n A 1 54 ASN 54 74 74 ASN ASN A . n A 1 55 HIS 55 75 75 HIS HIS A . n A 1 56 THR 56 76 76 THR THR A . n A 1 57 PRO 57 77 77 PRO PRO A . n A 1 58 LYS 58 78 78 LYS LYS A . n A 1 59 GLU 59 79 79 GLU GLU A . n A 1 60 LEU 60 80 80 LEU LEU A . n A 1 61 GLY 61 81 81 GLY GLY A . n A 1 62 MET 62 82 82 MET MET A . n A 1 63 GLU 63 83 83 GLU GLU A . n A 1 64 GLU 64 84 84 GLU GLU A . n A 1 65 GLU 65 85 85 GLU GLU A . n A 1 66 ASP 66 86 86 ASP ASP A . n A 1 67 VAL 67 87 87 VAL VAL A . n A 1 68 ILE 68 88 88 ILE ILE A . n A 1 69 GLU 69 89 89 GLU GLU A . n A 1 70 VAL 70 90 90 VAL VAL A . n A 1 71 TYR 71 91 91 TYR TYR A . n A 1 72 GLN 72 92 92 GLN GLN A . n A 1 73 GLU 73 93 93 GLU GLU A . n A 1 74 GLN 74 94 94 GLN GLN A . n A 1 75 THR 75 95 95 THR THR A . n A 1 76 GLY 76 96 96 GLY GLY A . n A 1 77 GLY 77 97 97 GLY GLY A . n B 2 1 ASP 1 195 195 ASP ASP B . n B 2 2 THR 2 196 196 THR THR B . n B 2 3 ALA 3 197 197 ALA ALA B . n B 2 4 GLY 4 198 198 GLY GLY B . n B 2 5 CYS 5 199 199 CYS CYS B . n B 2 6 ILE 6 200 200 ILE ILE B . n B 2 7 VAL 7 201 201 VAL VAL B . n B 2 8 ILE 8 202 202 ILE ILE B . n B 2 9 SEP 9 203 203 SEP SEP B . n B 2 10 ASP 10 204 204 ASP ASP B . n B 2 11 SEP 11 205 205 SEP SEP B . n B 2 12 GLU 12 206 206 GLU GLU B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B SEP 9 B SEP 203 ? SER 'modified residue' 2 B SEP 11 B SEP 205 ? SER 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1360 ? 1 MORE -10 ? 1 'SSA (A^2)' 5850 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-07 2 'Structure model' 1 1 2019-12-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_citation_author.identifier_ORCID' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 SUMO1 0.3 ? mM '[U-13C; U-15N]' 1 'Phosphorylated SIM from viral protein IE2' 3 ? mM 'natural abundance' 2 SUMO1 1 ? mM '[U-13C; U-15N]' 2 'Phosphorylated SIM from viral protein IE2' 1.5 ? mM 'natural abundance' 3 'Phosphorylated SIM from viral protein IE2' 3 ? mM 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 HZ2 A LYS 45 ? ? OD2 A ASP 73 ? ? 1.59 2 3 HZ3 A LYS 25 ? ? OE2 A GLU 33 ? ? 1.58 3 5 HZ2 A LYS 48 ? ? OD1 A ASP 73 ? ? 1.57 4 5 OD1 A ASP 30 ? ? HG A SER 32 ? ? 1.59 5 5 HZ3 A LYS 25 ? ? OE1 A GLU 33 ? ? 1.60 6 6 HZ2 A LYS 39 ? ? O3P B SEP 203 ? ? 1.56 7 6 OD1 A ASP 30 ? ? HG A SER 32 ? ? 1.59 8 6 HZ3 A LYS 25 ? ? OE1 A GLU 33 ? ? 1.60 9 7 HZ1 A LYS 46 ? ? OE2 A GLU 49 ? ? 1.59 10 7 HZ1 A LYS 39 ? ? O3P B SEP 203 ? ? 1.60 11 8 HZ1 A LYS 39 ? ? O1P B SEP 203 ? ? 1.56 12 8 HZ3 A LYS 46 ? ? OD1 B ASP 204 ? ? 1.60 13 9 HZ2 A LYS 48 ? ? OD1 A ASP 73 ? ? 1.57 14 9 H A HIS 35 ? ? O B GLY 198 ? ? 1.59 15 10 HZ2 A LYS 48 ? ? OD1 A ASP 73 ? ? 1.56 16 10 HZ1 A LYS 45 ? ? OD2 A ASP 73 ? ? 1.60 17 11 HZ2 A LYS 48 ? ? OD1 A ASP 73 ? ? 1.59 18 11 HZ1 A LYS 23 ? ? OE1 A GLU 85 ? ? 1.59 19 11 HZ2 A LYS 45 ? ? OD2 A ASP 73 ? ? 1.60 20 12 HZ2 A LYS 45 ? ? OD2 A ASP 73 ? ? 1.59 21 12 HZ3 A LYS 25 ? ? OE1 A GLU 33 ? ? 1.60 22 12 O A PRO 58 ? ? HG A SER 61 ? ? 1.60 23 13 HZ2 A LYS 48 ? ? OD1 A ASP 73 ? ? 1.58 24 13 HZ1 A LYS 23 ? ? OE1 A GLU 85 ? ? 1.59 25 14 HZ1 A LYS 39 ? ? O3P B SEP 203 ? ? 1.56 26 14 HZ2 A LYS 45 ? ? OD2 A ASP 73 ? ? 1.57 27 15 HZ2 A LYS 39 ? ? O3P B SEP 203 ? ? 1.56 28 15 HZ3 A LYS 25 ? ? OE1 A GLU 33 ? ? 1.60 29 16 HZ2 A LYS 48 ? ? OD1 A ASP 73 ? ? 1.57 30 16 HZ2 A LYS 45 ? ? OD2 A ASP 73 ? ? 1.58 31 17 HZ2 A LYS 23 ? ? OE2 A GLU 84 ? ? 1.58 32 17 HZ1 A LYS 23 ? ? OE1 A GLU 85 ? ? 1.60 33 18 HZ2 A LYS 45 ? ? OD2 A ASP 73 ? ? 1.57 34 19 HZ2 A LYS 45 ? ? OD2 A ASP 73 ? ? 1.57 35 19 HZ2 A LYS 48 ? ? OD1 A ASP 73 ? ? 1.58 36 19 HZ3 A LYS 23 ? ? OE1 A GLU 85 ? ? 1.59 37 20 HZ3 A LYS 39 ? ? O3P B SEP 203 ? ? 1.57 38 20 HZ2 A LYS 48 ? ? OD1 A ASP 73 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 80 ? ? 72.76 -55.05 2 1 GLU A 83 ? ? -124.81 -167.83 3 2 THR A 41 ? ? -177.94 -29.95 4 2 LEU A 80 ? ? 72.70 -53.86 5 3 MET A 40 ? ? -68.60 93.89 6 3 THR A 41 ? ? 175.15 -45.57 7 3 LEU A 80 ? ? 74.26 -32.95 8 4 MET A 40 ? ? -68.60 94.90 9 4 THR A 41 ? ? 160.98 -24.57 10 4 LEU A 80 ? ? 71.65 -57.18 11 5 THR A 41 ? ? 179.34 -24.91 12 5 LEU A 80 ? ? 72.38 -50.15 13 6 LYS A 39 ? ? -126.05 -162.64 14 6 LEU A 80 ? ? 72.91 -54.68 15 7 SER A 31 ? ? 63.87 75.17 16 7 THR A 41 ? ? 170.58 -25.82 17 7 LEU A 80 ? ? 73.25 -52.75 18 8 THR A 41 ? ? -177.30 -43.51 19 8 THR A 42 ? ? -51.16 105.00 20 8 LEU A 80 ? ? 73.56 -47.43 21 9 LYS A 39 ? ? -125.94 -165.86 22 9 LEU A 80 ? ? 73.61 -43.12 23 10 THR A 41 ? ? -177.55 -25.33 24 10 LEU A 80 ? ? 72.27 -41.00 25 11 LEU A 80 ? ? 72.12 -53.77 26 12 ASN A 60 ? ? 70.52 31.62 27 12 ASN A 74 ? ? -104.63 67.32 28 12 LEU A 80 ? ? 72.30 -51.23 29 13 SER A 31 ? ? 60.61 79.36 30 13 THR A 41 ? ? 175.82 -34.90 31 13 ASN A 60 ? ? 70.90 33.16 32 13 LEU A 80 ? ? 72.42 -53.02 33 14 PRO A 58 ? ? -69.65 -179.18 34 14 LEU A 80 ? ? 71.83 -49.00 35 14 THR A 95 ? ? -69.94 -73.56 36 15 THR A 41 ? ? 177.55 -27.86 37 15 ASN A 60 ? ? 76.74 -12.78 38 15 LEU A 80 ? ? 73.04 -47.20 39 16 LEU A 80 ? ? 71.29 -70.54 40 17 LEU A 80 ? ? 73.00 -48.87 41 18 LEU A 80 ? ? 70.66 -55.33 42 19 THR A 41 ? ? 168.31 -28.86 43 19 LEU A 80 ? ? 73.35 -55.86 44 20 THR A 41 ? ? -179.79 -24.22 45 20 LEU A 80 ? ? 70.71 -69.42 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #