HEADER TRANSFERASE 06-JUN-19 6K79 TITLE GLYCEROL KINASE FORM THERMOCOCCUS KODAKARENSIS, COMPLEX STRUCTURE WITH TITLE 2 SUBSTRATE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCEROL KINASE; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: ATP:GLYCEROL 3-PHOSPHOTRANSFERASE,GLYCEROKINASE,GK; COMPND 5 EC: 2.7.1.30; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: GLYCEROL KINASE; COMPND 9 CHAIN: C, D, A; COMPND 10 SYNONYM: ATP:GLYCEROL 3-PHOSPHOTRANSFERASE,GLYCEROKINASE,GK; COMPND 11 EC: 2.7.1.30; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS KODAKARENSIS (STRAIN ATCC BAA-918 SOURCE 3 / JCM 12380 / KOD1); SOURCE 4 ORGANISM_TAXID: 69014; SOURCE 5 STRAIN: ATCC BAA-918 / JCM 12380 / KOD1; SOURCE 6 GENE: GLPK, TK1396; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: THERMOCOCCUS KODAKARENSIS (STRAIN ATCC BAA-918 SOURCE 11 / JCM 12380 / KOD1); SOURCE 12 ORGANISM_TAXID: 69014; SOURCE 13 STRAIN: ATCC BAA-918 / JCM 12380 / KOD1; SOURCE 14 GENE: GLPK, TK1396; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCEROL, KINASE, ATP, ARCHAEA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KOGA,C.ANGKAWIDJAJA,H.MATSUMURA,R.HOKAO REVDAT 2 27-MAR-24 6K79 1 REMARK REVDAT 1 10-JUN-20 6K79 0 JRNL AUTH R.HOKAO,H.MATSUMURA,R.KATSUMI,C.ANGKAWIDJAJA,K.TAKANO, JRNL AUTH 2 S.KANAYA,Y.KOGA JRNL TITL STRUCTURAL ANALYSIS OF HEXAMERIC STRUCTURE OF GLYCEROL JRNL TITL 2 KINASE FROM THERMOCOCCUS KODAKARAEINSIS KOD1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 99716 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5226 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.19 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7350 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 381 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 15585 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 457 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.05000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : -0.01000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.279 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.214 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.165 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.661 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 15969 ; 0.010 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 14581 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 21607 ; 1.418 ; 1.732 REMARK 3 BOND ANGLES OTHERS (DEGREES): 34062 ; 0.496 ; 1.707 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1957 ; 7.601 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 559 ;30.922 ;18.050 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2282 ;18.872 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 112 ;22.536 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2069 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 17935 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 3019 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7840 ; 2.370 ; 3.162 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 7841 ; 2.370 ; 3.162 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9793 ; 3.553 ; 4.735 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 9794 ; 3.552 ; 4.735 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 8129 ; 3.289 ; 3.646 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 8129 ; 3.289 ; 3.646 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 11815 ; 5.175 ; 5.286 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 17698 ; 6.553 ;38.860 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 17699 ; 6.553 ;38.861 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6K79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1300012442. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : AGILENT EOS CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 109477 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: IMIDAZOLE, PEG1000, CALCIUM ACETATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 78.92072 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -71.14296 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 88.94959 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -42.15484 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -111.86473 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 ASP B 492 REMARK 465 SER B 493 REMARK 465 ALA B 494 REMARK 465 LYS B 495 REMARK 465 SER B 496 REMARK 465 ASN B 497 REMARK 465 MET C 1 REMARK 465 ASP C 492 REMARK 465 SER C 493 REMARK 465 ALA C 494 REMARK 465 LYS C 495 REMARK 465 SER C 496 REMARK 465 ASN C 497 REMARK 465 ASP D 492 REMARK 465 SER D 493 REMARK 465 ALA D 494 REMARK 465 LYS D 495 REMARK 465 SER D 496 REMARK 465 ASN D 497 REMARK 465 MET A 1 REMARK 465 ASP A 492 REMARK 465 SER A 493 REMARK 465 ALA A 494 REMARK 465 LYS A 495 REMARK 465 SER A 496 REMARK 465 ASN A 497 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASN A 288 O HOH A 601 1.77 REMARK 500 O LYS C 151 O LYS C 154 1.95 REMARK 500 O THR B 161 OG1 THR B 164 2.06 REMARK 500 O LYS A 122 O THR A 125 2.17 REMARK 500 OE2 GLU C 45 NH2 ARG C 105 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 371 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG C 105 CB - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 83 -41.57 63.27 REMARK 500 THR B 84 125.92 -38.28 REMARK 500 TYR B 132 -52.66 -27.69 REMARK 500 LEU B 192 74.27 -118.41 REMARK 500 GLU B 217 143.79 175.32 REMARK 500 ASP B 270 -123.37 55.93 REMARK 500 LEU B 287 -78.68 -115.44 REMARK 500 ASN B 288 58.65 -119.52 REMARK 500 THR B 302 -80.95 -129.29 REMARK 500 ARG C 67 23.21 80.54 REMARK 500 GLU C 83 -38.54 71.14 REMARK 500 ARG C 105 -36.34 -39.07 REMARK 500 ASP C 130 147.64 178.30 REMARK 500 ASP C 270 -133.56 54.01 REMARK 500 LEU C 287 -81.47 -111.96 REMARK 500 THR C 302 -75.35 -135.17 REMARK 500 GLU C 396 171.86 179.60 REMARK 500 GLU D 83 -46.39 66.82 REMARK 500 THR D 84 138.46 -39.61 REMARK 500 ASP D 91 43.96 -108.48 REMARK 500 THR D 171 -21.40 -141.01 REMARK 500 GLU D 217 142.13 -173.06 REMARK 500 ASP D 270 -124.08 59.13 REMARK 500 THR D 302 -75.11 -127.82 REMARK 500 TRP D 349 76.45 45.03 REMARK 500 GLU A 83 -49.81 74.67 REMARK 500 THR A 84 132.66 -39.18 REMARK 500 ASP A 91 31.90 -99.61 REMARK 500 GLU A 206 -38.41 -39.85 REMARK 500 GLU A 217 148.58 -175.71 REMARK 500 SER A 234 11.15 -148.93 REMARK 500 ASP A 270 -127.78 57.65 REMARK 500 LEU A 287 -84.39 -124.82 REMARK 500 ASN A 288 61.34 -109.75 REMARK 500 THR A 302 -72.94 -123.89 REMARK 500 GLU A 428 55.08 -91.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 154 GLY B 155 137.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 40 0.09 SIDE CHAIN REMARK 500 ARG B 67 0.10 SIDE CHAIN REMARK 500 ARG B 105 0.11 SIDE CHAIN REMARK 500 ARG B 183 0.08 SIDE CHAIN REMARK 500 ARG B 213 0.09 SIDE CHAIN REMARK 500 ARG B 382 0.11 SIDE CHAIN REMARK 500 ARG B 398 0.08 SIDE CHAIN REMARK 500 ARG C 183 0.09 SIDE CHAIN REMARK 500 ARG C 213 0.23 SIDE CHAIN REMARK 500 ARG C 310 0.09 SIDE CHAIN REMARK 500 ARG C 398 0.08 SIDE CHAIN REMARK 500 ARG C 419 0.15 SIDE CHAIN REMARK 500 ARG D 40 0.10 SIDE CHAIN REMARK 500 ARG D 104 0.10 SIDE CHAIN REMARK 500 ARG D 105 0.17 SIDE CHAIN REMARK 500 ARG D 149 0.08 SIDE CHAIN REMARK 500 ARG D 183 0.11 SIDE CHAIN REMARK 500 ARG D 213 0.08 SIDE CHAIN REMARK 500 ARG D 419 0.16 SIDE CHAIN REMARK 500 ARG D 459 0.08 SIDE CHAIN REMARK 500 ARG A 105 0.09 SIDE CHAIN REMARK 500 ARG A 183 0.10 SIDE CHAIN REMARK 500 ARG A 362 0.10 SIDE CHAIN REMARK 500 ARG A 419 0.19 SIDE CHAIN REMARK 500 ARG A 449 0.08 SIDE CHAIN REMARK 500 ARG A 470 0.09 SIDE CHAIN REMARK 500 ARG A 472 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 DBREF 6K79 B 1 497 UNP O93623 GLPK_THEKO 1 497 DBREF 6K79 C 1 497 UNP O93623 GLPK_THEKO 1 497 DBREF 6K79 D 1 497 UNP O93623 GLPK_THEKO 1 497 DBREF 6K79 A 1 497 UNP O93623 GLPK_THEKO 1 497 SEQADV 6K79 LEU B 145 UNP O93623 VAL 145 CONFLICT SEQADV 6K79 GLU B 247 UNP O93623 GLN 247 CONFLICT SEQADV 6K79 GLU B 271 UNP O93623 LYS 271 CONFLICT SEQADV 6K79 GLU C 271 UNP O93623 LYS 271 CONFLICT SEQADV 6K79 GLU D 271 UNP O93623 LYS 271 CONFLICT SEQADV 6K79 GLU A 271 UNP O93623 LYS 271 CONFLICT SEQRES 1 B 497 MET GLU LYS PHE VAL LEU SER LEU ASP GLU GLY THR THR SEQRES 2 B 497 SER ALA ARG ALA ILE ILE PHE ASP ARG GLU SER ASN ILE SEQRES 3 B 497 HIS GLY ILE GLY GLN TYR GLU PHE PRO GLN HIS TYR PRO SEQRES 4 B 497 ARG PRO GLY TRP VAL GLU HIS ASN PRO GLU GLU ILE TRP SEQRES 5 B 497 ASP ALA GLN LEU ARG ALA ILE LYS ASP ALA ILE GLN SER SEQRES 6 B 497 ALA ARG ILE GLU PRO ASN GLN ILE ALA ALA ILE GLY VAL SEQRES 7 B 497 THR ASN GLN ARG GLU THR THR LEU VAL TRP ASP LYS ASP SEQRES 8 B 497 GLY LYS PRO LEU TYR ASN ALA ILE VAL TRP GLN CYS ARG SEQRES 9 B 497 ARG THR ALA GLU MET VAL GLU GLU ILE LYS ARG GLU TYR SEQRES 10 B 497 GLY THR MET ILE LYS GLU LYS THR GLY LEU VAL PRO ASP SEQRES 11 B 497 ALA TYR PHE SER ALA SER LYS LEU LYS TRP LEU LEU ASP SEQRES 12 B 497 ASN LEU PRO GLY LEU ARG GLU LYS ALA GLU LYS GLY GLU SEQRES 13 B 497 VAL MET PHE GLY THR VAL ASP THR PHE LEU ILE TYR ARG SEQRES 14 B 497 LEU THR GLY GLU HIS VAL THR ASP TYR SER ASN ALA SER SEQRES 15 B 497 ARG THR MET LEU PHE ASN ILE LYS LYS LEU ASP TRP ASP SEQRES 16 B 497 ASP GLU LEU LEU GLU LEU PHE ASP ILE PRO GLU SER VAL SEQRES 17 B 497 LEU PRO GLU VAL ARG GLU SER SER GLU VAL TYR GLY TYR SEQRES 18 B 497 THR LYS LYS GLU LEU LEU GLY ALA GLU ILE PRO VAL SER SEQRES 19 B 497 GLY ASP ALA GLY ASP GLN GLN ALA ALA LEU PHE GLY GLU SEQRES 20 B 497 ALA ALA PHE GLU ALA GLY MET VAL LYS ALA THR TYR GLY SEQRES 21 B 497 THR GLY SER PHE ILE LEU VAL ASN THR ASP GLU MET VAL SEQRES 22 B 497 LEU TYR SER ASP ASN LEU LEU THR THR ILE ALA TRP GLY SEQRES 23 B 497 LEU ASN GLY ARG VAL SER TYR ALA LEU GLU GLY SER ILE SEQRES 24 B 497 PHE VAL THR GLY ALA ALA VAL GLN TRP LEU ARG ASP GLY SEQRES 25 B 497 ILE LYS ILE ILE LYS HIS ALA SER GLU THR GLU GLU LEU SEQRES 26 B 497 ALA THR LYS LEU GLU SER ASN GLU GLY VAL TYR PHE VAL SEQRES 27 B 497 PRO ALA PHE VAL GLY LEU GLY ALA PRO TYR TRP ASP GLN SEQRES 28 B 497 PHE ALA ARG GLY ILE ILE ILE GLY ILE THR ARG GLY THR SEQRES 29 B 497 GLY ARG GLU HIS LEU ALA ARG ALA THR LEU GLU ALA ILE SEQRES 30 B 497 ALA TYR LEU THR ARG ASP VAL VAL ASP GLU MET GLU LYS SEQRES 31 B 497 LEU VAL GLN ILE LYS GLU LEU ARG VAL ASP GLY GLY ALA SEQRES 32 B 497 THR ALA ASN ASP PHE LEU MET GLN PHE GLN ALA ASP ILE SEQRES 33 B 497 LEU ASN ARG LYS VAL ILE ARG PRO VAL VAL LYS GLU THR SEQRES 34 B 497 THR ALA LEU GLY ALA ALA TYR LEU ALA GLY LEU ALA VAL SEQRES 35 B 497 ASP TYR TRP ALA ASP THR ARG GLU ILE ALA GLU LEU TRP SEQRES 36 B 497 LYS ALA GLU ARG ILE PHE GLU PRO LYS MET ASP GLU LYS SEQRES 37 B 497 THR ARG GLU ARG LEU TYR LYS GLY TRP LYS GLU ALA VAL SEQRES 38 B 497 LYS ARG ALA MET GLY TRP ALA LYS VAL VAL ASP SER ALA SEQRES 39 B 497 LYS SER ASN SEQRES 1 C 497 MET GLU LYS PHE VAL LEU SER LEU ASP GLU GLY THR THR SEQRES 2 C 497 SER ALA ARG ALA ILE ILE PHE ASP ARG GLU SER ASN ILE SEQRES 3 C 497 HIS GLY ILE GLY GLN TYR GLU PHE PRO GLN HIS TYR PRO SEQRES 4 C 497 ARG PRO GLY TRP VAL GLU HIS ASN PRO GLU GLU ILE TRP SEQRES 5 C 497 ASP ALA GLN LEU ARG ALA ILE LYS ASP ALA ILE GLN SER SEQRES 6 C 497 ALA ARG ILE GLU PRO ASN GLN ILE ALA ALA ILE GLY VAL SEQRES 7 C 497 THR ASN GLN ARG GLU THR THR LEU VAL TRP ASP LYS ASP SEQRES 8 C 497 GLY LYS PRO LEU TYR ASN ALA ILE VAL TRP GLN CYS ARG SEQRES 9 C 497 ARG THR ALA GLU MET VAL GLU GLU ILE LYS ARG GLU TYR SEQRES 10 C 497 GLY THR MET ILE LYS GLU LYS THR GLY LEU VAL PRO ASP SEQRES 11 C 497 ALA TYR PHE SER ALA SER LYS LEU LYS TRP LEU LEU ASP SEQRES 12 C 497 ASN VAL PRO GLY LEU ARG GLU LYS ALA GLU LYS GLY GLU SEQRES 13 C 497 VAL MET PHE GLY THR VAL ASP THR PHE LEU ILE TYR ARG SEQRES 14 C 497 LEU THR GLY GLU HIS VAL THR ASP TYR SER ASN ALA SER SEQRES 15 C 497 ARG THR MET LEU PHE ASN ILE LYS LYS LEU ASP TRP ASP SEQRES 16 C 497 ASP GLU LEU LEU GLU LEU PHE ASP ILE PRO GLU SER VAL SEQRES 17 C 497 LEU PRO GLU VAL ARG GLU SER SER GLU VAL TYR GLY TYR SEQRES 18 C 497 THR LYS LYS GLU LEU LEU GLY ALA GLU ILE PRO VAL SER SEQRES 19 C 497 GLY ASP ALA GLY ASP GLN GLN ALA ALA LEU PHE GLY GLN SEQRES 20 C 497 ALA ALA PHE GLU ALA GLY MET VAL LYS ALA THR TYR GLY SEQRES 21 C 497 THR GLY SER PHE ILE LEU VAL ASN THR ASP GLU MET VAL SEQRES 22 C 497 LEU TYR SER ASP ASN LEU LEU THR THR ILE ALA TRP GLY SEQRES 23 C 497 LEU ASN GLY ARG VAL SER TYR ALA LEU GLU GLY SER ILE SEQRES 24 C 497 PHE VAL THR GLY ALA ALA VAL GLN TRP LEU ARG ASP GLY SEQRES 25 C 497 ILE LYS ILE ILE LYS HIS ALA SER GLU THR GLU GLU LEU SEQRES 26 C 497 ALA THR LYS LEU GLU SER ASN GLU GLY VAL TYR PHE VAL SEQRES 27 C 497 PRO ALA PHE VAL GLY LEU GLY ALA PRO TYR TRP ASP GLN SEQRES 28 C 497 PHE ALA ARG GLY ILE ILE ILE GLY ILE THR ARG GLY THR SEQRES 29 C 497 GLY ARG GLU HIS LEU ALA ARG ALA THR LEU GLU ALA ILE SEQRES 30 C 497 ALA TYR LEU THR ARG ASP VAL VAL ASP GLU MET GLU LYS SEQRES 31 C 497 LEU VAL GLN ILE LYS GLU LEU ARG VAL ASP GLY GLY ALA SEQRES 32 C 497 THR ALA ASN ASP PHE LEU MET GLN PHE GLN ALA ASP ILE SEQRES 33 C 497 LEU ASN ARG LYS VAL ILE ARG PRO VAL VAL LYS GLU THR SEQRES 34 C 497 THR ALA LEU GLY ALA ALA TYR LEU ALA GLY LEU ALA VAL SEQRES 35 C 497 ASP TYR TRP ALA ASP THR ARG GLU ILE ALA GLU LEU TRP SEQRES 36 C 497 LYS ALA GLU ARG ILE PHE GLU PRO LYS MET ASP GLU LYS SEQRES 37 C 497 THR ARG GLU ARG LEU TYR LYS GLY TRP LYS GLU ALA VAL SEQRES 38 C 497 LYS ARG ALA MET GLY TRP ALA LYS VAL VAL ASP SER ALA SEQRES 39 C 497 LYS SER ASN SEQRES 1 D 497 MET GLU LYS PHE VAL LEU SER LEU ASP GLU GLY THR THR SEQRES 2 D 497 SER ALA ARG ALA ILE ILE PHE ASP ARG GLU SER ASN ILE SEQRES 3 D 497 HIS GLY ILE GLY GLN TYR GLU PHE PRO GLN HIS TYR PRO SEQRES 4 D 497 ARG PRO GLY TRP VAL GLU HIS ASN PRO GLU GLU ILE TRP SEQRES 5 D 497 ASP ALA GLN LEU ARG ALA ILE LYS ASP ALA ILE GLN SER SEQRES 6 D 497 ALA ARG ILE GLU PRO ASN GLN ILE ALA ALA ILE GLY VAL SEQRES 7 D 497 THR ASN GLN ARG GLU THR THR LEU VAL TRP ASP LYS ASP SEQRES 8 D 497 GLY LYS PRO LEU TYR ASN ALA ILE VAL TRP GLN CYS ARG SEQRES 9 D 497 ARG THR ALA GLU MET VAL GLU GLU ILE LYS ARG GLU TYR SEQRES 10 D 497 GLY THR MET ILE LYS GLU LYS THR GLY LEU VAL PRO ASP SEQRES 11 D 497 ALA TYR PHE SER ALA SER LYS LEU LYS TRP LEU LEU ASP SEQRES 12 D 497 ASN VAL PRO GLY LEU ARG GLU LYS ALA GLU LYS GLY GLU SEQRES 13 D 497 VAL MET PHE GLY THR VAL ASP THR PHE LEU ILE TYR ARG SEQRES 14 D 497 LEU THR GLY GLU HIS VAL THR ASP TYR SER ASN ALA SER SEQRES 15 D 497 ARG THR MET LEU PHE ASN ILE LYS LYS LEU ASP TRP ASP SEQRES 16 D 497 ASP GLU LEU LEU GLU LEU PHE ASP ILE PRO GLU SER VAL SEQRES 17 D 497 LEU PRO GLU VAL ARG GLU SER SER GLU VAL TYR GLY TYR SEQRES 18 D 497 THR LYS LYS GLU LEU LEU GLY ALA GLU ILE PRO VAL SER SEQRES 19 D 497 GLY ASP ALA GLY ASP GLN GLN ALA ALA LEU PHE GLY GLN SEQRES 20 D 497 ALA ALA PHE GLU ALA GLY MET VAL LYS ALA THR TYR GLY SEQRES 21 D 497 THR GLY SER PHE ILE LEU VAL ASN THR ASP GLU MET VAL SEQRES 22 D 497 LEU TYR SER ASP ASN LEU LEU THR THR ILE ALA TRP GLY SEQRES 23 D 497 LEU ASN GLY ARG VAL SER TYR ALA LEU GLU GLY SER ILE SEQRES 24 D 497 PHE VAL THR GLY ALA ALA VAL GLN TRP LEU ARG ASP GLY SEQRES 25 D 497 ILE LYS ILE ILE LYS HIS ALA SER GLU THR GLU GLU LEU SEQRES 26 D 497 ALA THR LYS LEU GLU SER ASN GLU GLY VAL TYR PHE VAL SEQRES 27 D 497 PRO ALA PHE VAL GLY LEU GLY ALA PRO TYR TRP ASP GLN SEQRES 28 D 497 PHE ALA ARG GLY ILE ILE ILE GLY ILE THR ARG GLY THR SEQRES 29 D 497 GLY ARG GLU HIS LEU ALA ARG ALA THR LEU GLU ALA ILE SEQRES 30 D 497 ALA TYR LEU THR ARG ASP VAL VAL ASP GLU MET GLU LYS SEQRES 31 D 497 LEU VAL GLN ILE LYS GLU LEU ARG VAL ASP GLY GLY ALA SEQRES 32 D 497 THR ALA ASN ASP PHE LEU MET GLN PHE GLN ALA ASP ILE SEQRES 33 D 497 LEU ASN ARG LYS VAL ILE ARG PRO VAL VAL LYS GLU THR SEQRES 34 D 497 THR ALA LEU GLY ALA ALA TYR LEU ALA GLY LEU ALA VAL SEQRES 35 D 497 ASP TYR TRP ALA ASP THR ARG GLU ILE ALA GLU LEU TRP SEQRES 36 D 497 LYS ALA GLU ARG ILE PHE GLU PRO LYS MET ASP GLU LYS SEQRES 37 D 497 THR ARG GLU ARG LEU TYR LYS GLY TRP LYS GLU ALA VAL SEQRES 38 D 497 LYS ARG ALA MET GLY TRP ALA LYS VAL VAL ASP SER ALA SEQRES 39 D 497 LYS SER ASN SEQRES 1 A 497 MET GLU LYS PHE VAL LEU SER LEU ASP GLU GLY THR THR SEQRES 2 A 497 SER ALA ARG ALA ILE ILE PHE ASP ARG GLU SER ASN ILE SEQRES 3 A 497 HIS GLY ILE GLY GLN TYR GLU PHE PRO GLN HIS TYR PRO SEQRES 4 A 497 ARG PRO GLY TRP VAL GLU HIS ASN PRO GLU GLU ILE TRP SEQRES 5 A 497 ASP ALA GLN LEU ARG ALA ILE LYS ASP ALA ILE GLN SER SEQRES 6 A 497 ALA ARG ILE GLU PRO ASN GLN ILE ALA ALA ILE GLY VAL SEQRES 7 A 497 THR ASN GLN ARG GLU THR THR LEU VAL TRP ASP LYS ASP SEQRES 8 A 497 GLY LYS PRO LEU TYR ASN ALA ILE VAL TRP GLN CYS ARG SEQRES 9 A 497 ARG THR ALA GLU MET VAL GLU GLU ILE LYS ARG GLU TYR SEQRES 10 A 497 GLY THR MET ILE LYS GLU LYS THR GLY LEU VAL PRO ASP SEQRES 11 A 497 ALA TYR PHE SER ALA SER LYS LEU LYS TRP LEU LEU ASP SEQRES 12 A 497 ASN VAL PRO GLY LEU ARG GLU LYS ALA GLU LYS GLY GLU SEQRES 13 A 497 VAL MET PHE GLY THR VAL ASP THR PHE LEU ILE TYR ARG SEQRES 14 A 497 LEU THR GLY GLU HIS VAL THR ASP TYR SER ASN ALA SER SEQRES 15 A 497 ARG THR MET LEU PHE ASN ILE LYS LYS LEU ASP TRP ASP SEQRES 16 A 497 ASP GLU LEU LEU GLU LEU PHE ASP ILE PRO GLU SER VAL SEQRES 17 A 497 LEU PRO GLU VAL ARG GLU SER SER GLU VAL TYR GLY TYR SEQRES 18 A 497 THR LYS LYS GLU LEU LEU GLY ALA GLU ILE PRO VAL SER SEQRES 19 A 497 GLY ASP ALA GLY ASP GLN GLN ALA ALA LEU PHE GLY GLN SEQRES 20 A 497 ALA ALA PHE GLU ALA GLY MET VAL LYS ALA THR TYR GLY SEQRES 21 A 497 THR GLY SER PHE ILE LEU VAL ASN THR ASP GLU MET VAL SEQRES 22 A 497 LEU TYR SER ASP ASN LEU LEU THR THR ILE ALA TRP GLY SEQRES 23 A 497 LEU ASN GLY ARG VAL SER TYR ALA LEU GLU GLY SER ILE SEQRES 24 A 497 PHE VAL THR GLY ALA ALA VAL GLN TRP LEU ARG ASP GLY SEQRES 25 A 497 ILE LYS ILE ILE LYS HIS ALA SER GLU THR GLU GLU LEU SEQRES 26 A 497 ALA THR LYS LEU GLU SER ASN GLU GLY VAL TYR PHE VAL SEQRES 27 A 497 PRO ALA PHE VAL GLY LEU GLY ALA PRO TYR TRP ASP GLN SEQRES 28 A 497 PHE ALA ARG GLY ILE ILE ILE GLY ILE THR ARG GLY THR SEQRES 29 A 497 GLY ARG GLU HIS LEU ALA ARG ALA THR LEU GLU ALA ILE SEQRES 30 A 497 ALA TYR LEU THR ARG ASP VAL VAL ASP GLU MET GLU LYS SEQRES 31 A 497 LEU VAL GLN ILE LYS GLU LEU ARG VAL ASP GLY GLY ALA SEQRES 32 A 497 THR ALA ASN ASP PHE LEU MET GLN PHE GLN ALA ASP ILE SEQRES 33 A 497 LEU ASN ARG LYS VAL ILE ARG PRO VAL VAL LYS GLU THR SEQRES 34 A 497 THR ALA LEU GLY ALA ALA TYR LEU ALA GLY LEU ALA VAL SEQRES 35 A 497 ASP TYR TRP ALA ASP THR ARG GLU ILE ALA GLU LEU TRP SEQRES 36 A 497 LYS ALA GLU ARG ILE PHE GLU PRO LYS MET ASP GLU LYS SEQRES 37 A 497 THR ARG GLU ARG LEU TYR LYS GLY TRP LYS GLU ALA VAL SEQRES 38 A 497 LYS ARG ALA MET GLY TRP ALA LYS VAL VAL ASP SER ALA SEQRES 39 A 497 LYS SER ASN HET PGE B 501 10 HET GOL B 502 6 HET PGE C 501 10 HET GOL C 502 6 HET PGE D 501 10 HET GOL D 502 6 HET PGE A 501 10 HET GOL A 502 6 HETNAM PGE TRIETHYLENE GLYCOL HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 PGE 4(C6 H14 O4) FORMUL 6 GOL 4(C3 H8 O3) FORMUL 13 HOH *457(H2 O) HELIX 1 AA1 ASN B 47 ARG B 67 1 21 HELIX 2 AA2 GLU B 69 ASN B 71 5 3 HELIX 3 AA3 THR B 106 THR B 125 1 20 HELIX 4 AA4 PHE B 133 LEU B 145 1 13 HELIX 5 AA5 GLY B 147 LYS B 154 1 8 HELIX 6 AA6 VAL B 162 GLY B 172 1 11 HELIX 7 AA7 TYR B 178 ARG B 183 1 6 HELIX 8 AA8 ASP B 195 PHE B 202 1 8 HELIX 9 AA9 PRO B 205 LEU B 209 5 5 HELIX 10 AB1 LYS B 223 GLY B 228 1 6 HELIX 11 AB2 ASP B 239 GLU B 247 1 9 HELIX 12 AB3 THR B 302 GLY B 312 1 11 HELIX 13 AB4 SER B 320 THR B 327 1 8 HELIX 14 AB5 GLY B 365 LYS B 390 1 26 HELIX 15 AB6 GLY B 401 ALA B 405 5 5 HELIX 16 AB7 ASN B 406 ASN B 418 1 13 HELIX 17 AB8 GLU B 428 VAL B 442 1 15 HELIX 18 AB9 ASP B 447 TRP B 455 1 9 HELIX 19 AC1 ASP B 466 MET B 485 1 20 HELIX 20 AC2 GLY B 486 VAL B 491 1 6 HELIX 21 AC3 ASN C 47 ARG C 67 1 21 HELIX 22 AC4 GLU C 69 ASN C 71 5 3 HELIX 23 AC5 THR C 106 THR C 125 1 20 HELIX 24 AC6 PHE C 133 VAL C 145 1 13 HELIX 25 AC7 GLY C 147 LYS C 154 1 8 HELIX 26 AC8 THR C 161 GLY C 172 1 12 HELIX 27 AC9 TYR C 178 ARG C 183 1 6 HELIX 28 AD1 ASP C 195 PHE C 202 1 8 HELIX 29 AD2 PRO C 205 LEU C 209 5 5 HELIX 30 AD3 LYS C 223 GLY C 228 1 6 HELIX 31 AD4 ASP C 239 GLN C 247 1 9 HELIX 32 AD5 THR C 302 GLY C 312 1 11 HELIX 33 AD6 HIS C 318 SER C 320 5 3 HELIX 34 AD7 GLU C 321 THR C 327 1 7 HELIX 35 AD8 GLY C 365 LYS C 390 1 26 HELIX 36 AD9 GLY C 401 ALA C 405 5 5 HELIX 37 AE1 ASN C 406 ASN C 418 1 13 HELIX 38 AE2 GLU C 428 VAL C 442 1 15 HELIX 39 AE3 ASP C 447 TRP C 455 1 9 HELIX 40 AE4 ASP C 466 MET C 485 1 20 HELIX 41 AE5 GLY C 486 VAL C 490 5 5 HELIX 42 AE6 ASN D 47 ARG D 67 1 21 HELIX 43 AE7 GLU D 69 ASN D 71 5 3 HELIX 44 AE8 THR D 106 GLU D 112 1 7 HELIX 45 AE9 TYR D 117 THR D 125 1 9 HELIX 46 AF1 PHE D 133 VAL D 145 1 13 HELIX 47 AF2 GLY D 147 LYS D 154 1 8 HELIX 48 AF3 THR D 161 GLY D 172 1 12 HELIX 49 AF4 TYR D 178 ARG D 183 1 6 HELIX 50 AF5 ASP D 195 PHE D 202 1 8 HELIX 51 AF6 PRO D 205 LEU D 209 5 5 HELIX 52 AF7 LYS D 223 GLY D 228 1 6 HELIX 53 AF8 ASP D 239 GLN D 247 1 9 HELIX 54 AF9 THR D 302 GLY D 312 1 11 HELIX 55 AG1 SER D 320 LYS D 328 1 9 HELIX 56 AG2 GLY D 365 LYS D 390 1 26 HELIX 57 AG3 GLY D 401 ALA D 405 5 5 HELIX 58 AG4 ASN D 406 ASN D 418 1 13 HELIX 59 AG5 GLU D 428 VAL D 442 1 15 HELIX 60 AG6 ASP D 447 TRP D 455 1 9 HELIX 61 AG7 ASP D 466 MET D 485 1 20 HELIX 62 AG8 GLY D 486 VAL D 491 1 6 HELIX 63 AG9 ASN A 47 ARG A 67 1 21 HELIX 64 AH1 GLU A 69 ASN A 71 5 3 HELIX 65 AH2 THR A 106 THR A 125 1 20 HELIX 66 AH3 PHE A 133 ASP A 143 1 11 HELIX 67 AH4 GLY A 147 LYS A 154 1 8 HELIX 68 AH5 THR A 161 GLY A 172 1 12 HELIX 69 AH6 TYR A 178 SER A 182 1 5 HELIX 70 AH7 ASP A 195 PHE A 202 1 8 HELIX 71 AH8 PRO A 205 LEU A 209 5 5 HELIX 72 AH9 LYS A 223 GLY A 228 1 6 HELIX 73 AI1 ASP A 239 GLN A 247 1 9 HELIX 74 AI2 THR A 302 GLY A 312 1 11 HELIX 75 AI3 SER A 320 LYS A 328 1 9 HELIX 76 AI4 GLY A 365 LYS A 390 1 26 HELIX 77 AI5 GLY A 401 ALA A 405 5 5 HELIX 78 AI6 ASN A 406 ASN A 418 1 13 HELIX 79 AI7 GLU A 428 VAL A 442 1 15 HELIX 80 AI8 ASP A 447 TRP A 455 1 9 HELIX 81 AI9 ASP A 466 MET A 485 1 20 HELIX 82 AJ1 GLY A 486 VAL A 490 5 5 SHEET 1 AA1 6 ILE B 26 GLU B 33 0 SHEET 2 AA1 6 SER B 14 PHE B 20 -1 N ILE B 19 O HIS B 27 SHEET 3 AA1 6 PHE B 4 GLU B 10 -1 N VAL B 5 O PHE B 20 SHEET 4 AA1 6 ILE B 73 ASN B 80 1 O GLY B 77 N LEU B 8 SHEET 5 AA1 6 PRO B 232 GLY B 238 1 O GLY B 235 N VAL B 78 SHEET 6 AA1 6 SER B 216 TYR B 221 -1 N TYR B 219 O VAL B 233 SHEET 1 AA2 2 GLU B 45 HIS B 46 0 SHEET 2 AA2 2 ALA B 98 ILE B 99 -1 O ALA B 98 N HIS B 46 SHEET 1 AA3 2 THR B 85 TRP B 88 0 SHEET 2 AA3 2 MET B 158 THR B 161 -1 O GLY B 160 N LEU B 86 SHEET 1 AA4 2 VAL B 175 ASP B 177 0 SHEET 2 AA4 2 GLU B 211 ARG B 213 1 O ARG B 213 N THR B 176 SHEET 1 AA5 2 PHE B 187 ASN B 188 0 SHEET 2 AA5 2 ASP B 193 TRP B 194 -1 O ASP B 193 N ASN B 188 SHEET 1 AA6 7 LEU B 280 GLY B 286 0 SHEET 2 AA6 7 VAL B 291 ILE B 299 -1 O GLU B 296 N LEU B 280 SHEET 3 AA6 7 SER B 263 ASP B 270 -1 N ASP B 270 O TYR B 293 SHEET 4 AA6 7 MET B 254 TYR B 259 -1 N LYS B 256 O LEU B 266 SHEET 5 AA6 7 GLU B 396 ASP B 400 1 O ARG B 398 N VAL B 255 SHEET 6 AA6 7 VAL B 421 PRO B 424 1 O ILE B 422 N LEU B 397 SHEET 7 AA6 7 ALA B 457 PHE B 461 -1 O PHE B 461 N VAL B 421 SHEET 1 AA7 2 TYR B 336 VAL B 338 0 SHEET 2 AA7 2 ILE B 356 ILE B 358 -1 O ILE B 358 N TYR B 336 SHEET 1 AA8 6 ILE C 26 GLU C 33 0 SHEET 2 AA8 6 SER C 14 PHE C 20 -1 N ALA C 17 O GLY C 30 SHEET 3 AA8 6 PHE C 4 GLU C 10 -1 N SER C 7 O ILE C 18 SHEET 4 AA8 6 ILE C 73 ASN C 80 1 O ALA C 74 N PHE C 4 SHEET 5 AA8 6 PRO C 232 GLY C 238 1 O SER C 234 N ILE C 76 SHEET 6 AA8 6 SER C 216 TYR C 221 -1 N TYR C 219 O VAL C 233 SHEET 1 AA9 2 GLU C 45 HIS C 46 0 SHEET 2 AA9 2 ALA C 98 ILE C 99 -1 O ALA C 98 N HIS C 46 SHEET 1 AB1 2 LEU C 86 TRP C 88 0 SHEET 2 AB1 2 MET C 158 GLY C 160 -1 O MET C 158 N TRP C 88 SHEET 1 AB2 2 VAL C 175 ASP C 177 0 SHEET 2 AB2 2 GLU C 211 ARG C 213 1 O ARG C 213 N THR C 176 SHEET 1 AB3 2 PHE C 187 ASN C 188 0 SHEET 2 AB3 2 ASP C 193 TRP C 194 -1 O ASP C 193 N ASN C 188 SHEET 1 AB4 7 LEU C 280 GLY C 286 0 SHEET 2 AB4 7 VAL C 291 ILE C 299 -1 O GLU C 296 N LEU C 280 SHEET 3 AB4 7 SER C 263 ASP C 270 -1 N ASP C 270 O TYR C 293 SHEET 4 AB4 7 MET C 254 TYR C 259 -1 N THR C 258 O PHE C 264 SHEET 5 AB4 7 GLU C 396 ASP C 400 1 O ARG C 398 N VAL C 255 SHEET 6 AB4 7 VAL C 421 PRO C 424 1 O ILE C 422 N LEU C 397 SHEET 7 AB4 7 ALA C 457 PHE C 461 -1 O GLU C 458 N ARG C 423 SHEET 1 AB5 2 TYR C 336 VAL C 338 0 SHEET 2 AB5 2 ILE C 356 ILE C 358 -1 O ILE C 358 N TYR C 336 SHEET 1 AB6 6 ILE D 26 GLU D 33 0 SHEET 2 AB6 6 SER D 14 PHE D 20 -1 N ILE D 19 O HIS D 27 SHEET 3 AB6 6 PHE D 4 GLU D 10 -1 N VAL D 5 O PHE D 20 SHEET 4 AB6 6 ILE D 73 ASN D 80 1 O ALA D 74 N PHE D 4 SHEET 5 AB6 6 PRO D 232 GLY D 238 1 O SER D 234 N ILE D 76 SHEET 6 AB6 6 SER D 216 TYR D 221 -1 N GLY D 220 O VAL D 233 SHEET 1 AB7 2 GLU D 45 HIS D 46 0 SHEET 2 AB7 2 ALA D 98 ILE D 99 -1 O ALA D 98 N HIS D 46 SHEET 1 AB8 2 LEU D 86 TRP D 88 0 SHEET 2 AB8 2 MET D 158 GLY D 160 -1 O MET D 158 N TRP D 88 SHEET 1 AB9 2 VAL D 175 ASP D 177 0 SHEET 2 AB9 2 GLU D 211 ARG D 213 1 O ARG D 213 N THR D 176 SHEET 1 AC1 2 PHE D 187 ASN D 188 0 SHEET 2 AC1 2 ASP D 193 TRP D 194 -1 O ASP D 193 N ASN D 188 SHEET 1 AC2 7 LEU D 280 LEU D 287 0 SHEET 2 AC2 7 ARG D 290 ILE D 299 -1 O SER D 292 N TRP D 285 SHEET 3 AC2 7 SER D 263 ASP D 270 -1 N THR D 269 O TYR D 293 SHEET 4 AC2 7 MET D 254 TYR D 259 -1 N LYS D 256 O LEU D 266 SHEET 5 AC2 7 GLU D 396 ASP D 400 1 O ASP D 400 N TYR D 259 SHEET 6 AC2 7 VAL D 421 PRO D 424 1 O ILE D 422 N LEU D 397 SHEET 7 AC2 7 ALA D 457 PHE D 461 -1 O PHE D 461 N VAL D 421 SHEET 1 AC3 2 TYR D 336 VAL D 338 0 SHEET 2 AC3 2 ILE D 356 ILE D 358 -1 O ILE D 356 N VAL D 338 SHEET 1 AC4 6 ILE A 26 GLU A 33 0 SHEET 2 AC4 6 SER A 14 PHE A 20 -1 N ILE A 19 O HIS A 27 SHEET 3 AC4 6 PHE A 4 GLU A 10 -1 N SER A 7 O ILE A 18 SHEET 4 AC4 6 ILE A 73 ASN A 80 1 O ALA A 74 N PHE A 4 SHEET 5 AC4 6 PRO A 232 GLY A 238 1 O SER A 234 N ILE A 76 SHEET 6 AC4 6 SER A 216 TYR A 221 -1 N TYR A 219 O VAL A 233 SHEET 1 AC5 2 GLU A 45 HIS A 46 0 SHEET 2 AC5 2 ALA A 98 ILE A 99 -1 O ALA A 98 N HIS A 46 SHEET 1 AC6 2 LEU A 86 TRP A 88 0 SHEET 2 AC6 2 MET A 158 GLY A 160 -1 O MET A 158 N TRP A 88 SHEET 1 AC7 2 VAL A 175 ASP A 177 0 SHEET 2 AC7 2 GLU A 211 ARG A 213 1 O ARG A 213 N THR A 176 SHEET 1 AC8 2 PHE A 187 ASN A 188 0 SHEET 2 AC8 2 ASP A 193 TRP A 194 -1 O ASP A 193 N ASN A 188 SHEET 1 AC9 7 LEU A 280 GLY A 286 0 SHEET 2 AC9 7 VAL A 291 ILE A 299 -1 O SER A 292 N TRP A 285 SHEET 3 AC9 7 SER A 263 ASP A 270 -1 N THR A 269 O TYR A 293 SHEET 4 AC9 7 MET A 254 TYR A 259 -1 N LYS A 256 O LEU A 266 SHEET 5 AC9 7 GLU A 396 ASP A 400 1 O ARG A 398 N VAL A 255 SHEET 6 AC9 7 VAL A 421 PRO A 424 1 O ILE A 422 N LEU A 397 SHEET 7 AC9 7 ALA A 457 PHE A 461 -1 O PHE A 461 N VAL A 421 SHEET 1 AD1 2 TYR A 336 VAL A 338 0 SHEET 2 AD1 2 ILE A 356 ILE A 358 -1 O ILE A 358 N TYR A 336 CISPEP 1 ALA B 346 PRO B 347 0 4.44 CISPEP 2 ALA C 346 PRO C 347 0 4.87 CISPEP 3 PRO D 146 GLY D 147 0 -24.60 CISPEP 4 ALA D 346 PRO D 347 0 -7.66 CISPEP 5 ALA A 346 PRO A 347 0 -4.37 SITE 1 AC1 5 TYR B 132 PHE B 264 SER B 298 ILE B 299 SITE 2 AC1 5 PHE B 300 SITE 1 AC2 6 ARG B 82 GLU B 83 TRP B 101 TYR B 132 SITE 2 AC2 6 ASP B 239 PHE B 264 SITE 1 AC3 6 TRP C 101 PHE C 264 SER C 298 ILE C 299 SITE 2 AC3 6 PHE C 300 HOH C 656 SITE 1 AC4 6 ARG C 82 GLU C 83 TRP C 101 TYR C 132 SITE 2 AC4 6 ASP C 239 PHE C 264 SITE 1 AC5 3 TRP D 101 TYR D 132 PHE D 300 SITE 1 AC6 7 GLN D 81 ARG D 82 GLU D 83 TRP D 101 SITE 2 AC6 7 TYR D 132 ASP D 239 PHE D 264 SITE 1 AC7 5 TYR A 132 PHE A 264 ILE A 299 PHE A 300 SITE 2 AC7 5 HOH A 700 SITE 1 AC8 7 GLN A 81 ARG A 82 GLU A 83 TRP A 101 SITE 2 AC8 7 TYR A 132 ASP A 239 PHE A 264 CRYST1 67.041 72.128 115.994 103.43 94.96 99.48 P 1 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014916 0.002491 0.001983 0.00000 SCALE2 0.000000 0.014056 0.003642 0.00000 SCALE3 0.000000 0.000000 0.008939 0.00000