HEADER TRANSFERASE 11-JUN-19 6K88 TITLE RGLG1 MIDAS BINDS CALCIUM ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RGLG1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RING DOMAIN LIGASE 1; COMPND 5 EC: 2.3.2.27; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: RGLG1, AT3G01650, F4P13.19; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RGLG1 VWA, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.WANG,Y.WU REVDAT 2 27-MAR-24 6K88 1 LINK REVDAT 1 24-JUN-20 6K88 0 JRNL AUTH Q.WANG,Y.WU JRNL TITL RGLG1 MIDAS BINDS CALCIUM ION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 40402 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.0047 - 4.3077 0.99 3114 145 0.1746 0.2023 REMARK 3 2 4.3077 - 3.4199 0.99 3008 134 0.1642 0.1933 REMARK 3 3 3.4199 - 2.9878 0.99 2928 147 0.1853 0.2358 REMARK 3 4 2.9878 - 2.7147 0.99 2889 148 0.1898 0.2280 REMARK 3 5 2.7147 - 2.5202 0.99 2871 171 0.1935 0.2332 REMARK 3 6 2.5202 - 2.3716 0.99 2875 156 0.1926 0.2401 REMARK 3 7 2.3716 - 2.2529 1.00 2845 194 0.1968 0.2479 REMARK 3 8 2.2529 - 2.1548 0.99 2870 143 0.2024 0.2781 REMARK 3 9 2.1548 - 2.0719 0.99 2882 123 0.2209 0.2536 REMARK 3 10 2.0719 - 2.0004 0.97 2823 124 0.2219 0.3030 REMARK 3 11 2.0004 - 1.9378 0.94 2674 147 0.2322 0.2781 REMARK 3 12 1.9378 - 1.8825 0.90 2580 153 0.2284 0.3357 REMARK 3 13 1.8825 - 1.8329 0.82 2366 121 0.2546 0.3274 REMARK 3 14 1.8329 - 1.7882 0.59 1690 81 0.2666 0.3793 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3671 REMARK 3 ANGLE : 1.101 4983 REMARK 3 CHIRALITY : 0.044 551 REMARK 3 PLANARITY : 0.005 659 REMARK 3 DIHEDRAL : 13.829 1343 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K88 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1300012479. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AICHISR REMARK 200 BEAMLINE : BL2S1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97913 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42755 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.17300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 11.40 REMARK 200 R MERGE FOR SHELL (I) : 1.28700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CACL2, 0.1 M TRIS-HCL PH 8.0, REMARK 280 20%PEG4K, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.43800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.20150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.36350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.20150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.43800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.36350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 123 REMARK 465 THR A 124 REMARK 465 SER A 125 REMARK 465 SER A 126 REMARK 465 MET A 127 REMARK 465 ALA A 128 REMARK 465 ASP A 129 REMARK 465 ILE A 130 REMARK 465 GLY A 131 REMARK 465 SER A 132 REMARK 465 ILE A 133 REMARK 465 SER A 134 REMARK 465 ASP A 135 REMARK 465 ASN A 136 REMARK 465 TYR A 137 REMARK 465 SER A 138 REMARK 465 SER A 139 REMARK 465 LEU A 140 REMARK 465 LEU A 141 REMARK 465 GLN A 142 REMARK 465 VAL A 143 REMARK 465 SER A 144 REMARK 465 GLU A 145 REMARK 465 ALA A 146 REMARK 465 LEU A 147 REMARK 465 GLY A 148 REMARK 465 ARG A 149 REMARK 465 ALA A 150 REMARK 465 GLY A 151 REMARK 465 LEU A 152 REMARK 465 GLU A 153 REMARK 465 SER A 154 REMARK 465 SER A 275 REMARK 465 GLY A 276 REMARK 465 GLY B 123 REMARK 465 THR B 124 REMARK 465 SER B 125 REMARK 465 SER B 126 REMARK 465 MET B 127 REMARK 465 ALA B 128 REMARK 465 ASP B 129 REMARK 465 ILE B 130 REMARK 465 GLY B 131 REMARK 465 SER B 132 REMARK 465 ILE B 133 REMARK 465 SER B 134 REMARK 465 ASP B 135 REMARK 465 ASN B 136 REMARK 465 TYR B 137 REMARK 465 SER B 138 REMARK 465 SER B 139 REMARK 465 LEU B 140 REMARK 465 LEU B 141 REMARK 465 GLN B 142 REMARK 465 VAL B 143 REMARK 465 SER B 144 REMARK 465 GLU B 145 REMARK 465 ALA B 146 REMARK 465 LEU B 147 REMARK 465 GLY B 148 REMARK 465 ARG B 149 REMARK 465 ALA B 150 REMARK 465 GLY B 151 REMARK 465 LEU B 152 REMARK 465 GLU B 153 REMARK 465 SER B 154 REMARK 465 SER B 275 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 516 O HOH B 649 2.10 REMARK 500 O HOH A 506 O HOH A 639 2.11 REMARK 500 O HOH A 702 O HOH A 705 2.13 REMARK 500 NZ LYS B 360 O HOH B 501 2.15 REMARK 500 O HOH A 696 O HOH A 705 2.16 REMARK 500 OE2 GLU A 239 O HOH A 501 2.16 REMARK 500 O HOH B 660 O HOH B 677 2.16 REMARK 500 O HOH A 618 O HOH B 671 2.17 REMARK 500 O HOH A 616 O HOH B 639 2.17 REMARK 500 OE1 GLU A 336 O HOH A 502 2.18 REMARK 500 O HOH B 558 O HOH B 647 2.19 REMARK 500 O HOH A 676 O HOH B 632 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 648 O HOH B 604 2555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 200 -90.92 -122.44 REMARK 500 HIS A 221 -128.22 48.17 REMARK 500 PRO A 230 -92.56 -33.11 REMARK 500 GLU A 231 46.99 -78.52 REMARK 500 ALA A 255 -132.62 -151.34 REMARK 500 ASP A 347 93.86 -69.20 REMARK 500 PHE B 175 32.39 -145.17 REMARK 500 SER B 184 -154.22 -162.42 REMARK 500 HIS B 221 -127.38 44.43 REMARK 500 GLU B 231 -176.17 61.31 REMARK 500 ALA B 255 -134.85 -145.03 REMARK 500 PRO B 257 -178.08 -69.59 REMARK 500 ASP B 294 123.85 177.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 711 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH B 678 DISTANCE = 6.30 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 156 OD1 REMARK 620 2 ASP A 205 OD1 98.8 REMARK 620 3 ASP A 205 OD2 90.1 51.7 REMARK 620 4 ASP A 207 OD1 93.7 73.2 124.7 REMARK 620 5 LEU A 209 O 168.0 93.2 97.2 90.0 REMARK 620 6 HOH A 643 O 81.6 132.3 80.6 154.4 90.2 REMARK 620 7 HOH A 650 O 82.2 155.5 152.5 82.3 87.0 72.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 164 OG1 REMARK 620 2 SER A 166 OG 86.9 REMARK 620 3 THR A 258 OG1 82.0 167.2 REMARK 620 4 GLN A 288 O 139.8 110.1 82.6 REMARK 620 5 HOH A 518 O 72.5 81.2 101.3 74.5 REMARK 620 6 HOH A 568 O 154.1 91.3 96.0 64.5 132.7 REMARK 620 7 GLU B 296 OE2 88.9 99.0 87.1 53.4 23.7 116.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 296 OE2 REMARK 620 2 THR B 164 OG1 32.1 REMARK 620 3 SER B 166 OG 32.5 2.4 REMARK 620 4 THR B 258 OG1 29.7 2.5 3.6 REMARK 620 5 GLN B 288 O 29.8 3.0 2.7 1.7 REMARK 620 6 HOH B 529 O 31.8 0.8 1.9 2.1 2.3 REMARK 620 7 HOH B 586 O 30.0 3.6 2.5 2.8 1.0 2.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 338 OD1 REMARK 620 2 ASP A 338 OD2 51.4 REMARK 620 3 GLN A 350 OE1 90.5 86.0 REMARK 620 4 GLU A 378 OE2 74.5 123.3 77.8 REMARK 620 5 HOH A 549 O 95.2 85.0 162.9 119.2 REMARK 620 6 HOH A 611 O 127.5 76.3 79.8 148.6 84.0 REMARK 620 7 HOH A 652 O 154.9 153.0 96.2 83.3 85.5 77.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 338 O REMARK 620 2 ASP A 338 OD1 75.8 REMARK 620 3 ASP A 347 OD1 86.6 155.1 REMARK 620 4 ASP A 347 OD2 100.1 146.6 53.3 REMARK 620 5 PHE A 349 O 89.3 81.1 81.3 132.4 REMARK 620 6 GLU A 378 OE1 166.0 107.5 85.7 84.6 77.9 REMARK 620 7 GLU A 378 OE2 140.8 73.5 129.2 92.4 109.2 51.2 REMARK 620 8 HOH A 570 O 76.4 78.5 114.7 68.4 157.4 117.5 74.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 156 OD1 REMARK 620 2 ASP B 205 OD1 98.4 REMARK 620 3 ASP B 205 OD2 85.5 53.7 REMARK 620 4 ASP B 207 OD1 87.7 74.0 125.3 REMARK 620 5 LEU B 209 O 178.5 82.4 94.1 93.7 REMARK 620 6 HOH B 583 O 87.0 130.9 78.5 155.1 91.5 REMARK 620 7 HOH B 611 O 85.7 153.2 153.0 79.7 94.1 75.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 338 O REMARK 620 2 ASP B 338 OD1 75.3 REMARK 620 3 ASP B 347 OD1 87.7 156.2 REMARK 620 4 ASP B 347 OD2 102.4 147.0 52.5 REMARK 620 5 PHE B 349 O 91.5 80.4 83.5 132.5 REMARK 620 6 GLU B 378 OE1 168.4 110.0 84.0 78.9 79.6 REMARK 620 7 GLU B 378 OE2 139.2 72.2 129.7 92.0 106.5 51.6 REMARK 620 8 HOH B 548 O 76.6 72.9 119.8 74.5 152.7 114.6 70.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 338 OD1 REMARK 620 2 ASP B 338 OD2 49.9 REMARK 620 3 GLN B 350 OE1 90.2 83.7 REMARK 620 4 GLU B 378 OE2 70.4 117.0 77.8 REMARK 620 5 HOH B 534 O 87.1 79.8 160.6 119.1 REMARK 620 6 HOH B 606 O 122.3 72.5 79.6 154.0 85.6 REMARK 620 7 HOH B 639 O 144.9 153.5 112.3 87.8 79.8 89.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 404 DBREF 6K88 A 133 383 UNP Q9SS90 RGLG1_ARATH 133 383 DBREF 6K88 B 133 383 UNP Q9SS90 RGLG1_ARATH 133 383 SEQADV 6K88 GLY A 123 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 THR A 124 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 SER A 125 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 SER A 126 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 MET A 127 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 ALA A 128 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 ASP A 129 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 ILE A 130 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 GLY A 131 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 SER A 132 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 GLY B 123 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 THR B 124 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 SER B 125 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 SER B 126 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 MET B 127 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 ALA B 128 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 ASP B 129 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 ILE B 130 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 GLY B 131 UNP Q9SS90 EXPRESSION TAG SEQADV 6K88 SER B 132 UNP Q9SS90 EXPRESSION TAG SEQRES 1 A 261 GLY THR SER SER MET ALA ASP ILE GLY SER ILE SER ASP SEQRES 2 A 261 ASN TYR SER SER LEU LEU GLN VAL SER GLU ALA LEU GLY SEQRES 3 A 261 ARG ALA GLY LEU GLU SER SER ASN LEU ILE VAL GLY ILE SEQRES 4 A 261 ASP PHE THR LYS SER ASN GLU TRP THR GLY ALA LYS SER SEQRES 5 A 261 PHE ASN ARG LYS SER LEU HIS HIS LEU SER ASN THR PRO SEQRES 6 A 261 ASN PRO TYR GLU GLN ALA ILE THR ILE ILE GLY ARG THR SEQRES 7 A 261 LEU ALA ALA PHE ASP GLU ASP ASN LEU ILE PRO CYS TYR SEQRES 8 A 261 GLY PHE GLY ASP ALA SER THR HIS ASP GLN ASP VAL PHE SEQRES 9 A 261 SER PHE TYR PRO GLU GLY ARG PHE CYS ASN GLY PHE GLU SEQRES 10 A 261 GLU VAL LEU ALA ARG TYR ARG GLU ILE VAL PRO GLN LEU SEQRES 11 A 261 LYS LEU ALA GLY PRO THR SER PHE ALA PRO ILE ILE GLU SEQRES 12 A 261 MET ALA MET THR VAL VAL GLU GLN SER SER GLY GLN TYR SEQRES 13 A 261 HIS VAL LEU VAL ILE ILE ALA ASP GLY GLN VAL THR ARG SEQRES 14 A 261 SER VAL ASP THR GLU HIS GLY ARG LEU SER PRO GLN GLU SEQRES 15 A 261 GLN LYS THR VAL ASP ALA ILE VAL LYS ALA SER THR LEU SEQRES 16 A 261 PRO LEU SER ILE VAL LEU VAL GLY VAL GLY ASP GLY PRO SEQRES 17 A 261 TRP ASP MET MET GLN GLU PHE ASP ASP ASN ILE PRO ALA SEQRES 18 A 261 ARG ALA PHE ASP ASN PHE GLN PHE VAL ASN PHE THR GLU SEQRES 19 A 261 ILE MET SER LYS ASN LYS ASP GLN SER ARG LYS GLU THR SEQRES 20 A 261 GLU PHE ALA LEU SER ALA LEU MET GLU ILE PRO PRO GLN SEQRES 21 A 261 TYR SEQRES 1 B 261 GLY THR SER SER MET ALA ASP ILE GLY SER ILE SER ASP SEQRES 2 B 261 ASN TYR SER SER LEU LEU GLN VAL SER GLU ALA LEU GLY SEQRES 3 B 261 ARG ALA GLY LEU GLU SER SER ASN LEU ILE VAL GLY ILE SEQRES 4 B 261 ASP PHE THR LYS SER ASN GLU TRP THR GLY ALA LYS SER SEQRES 5 B 261 PHE ASN ARG LYS SER LEU HIS HIS LEU SER ASN THR PRO SEQRES 6 B 261 ASN PRO TYR GLU GLN ALA ILE THR ILE ILE GLY ARG THR SEQRES 7 B 261 LEU ALA ALA PHE ASP GLU ASP ASN LEU ILE PRO CYS TYR SEQRES 8 B 261 GLY PHE GLY ASP ALA SER THR HIS ASP GLN ASP VAL PHE SEQRES 9 B 261 SER PHE TYR PRO GLU GLY ARG PHE CYS ASN GLY PHE GLU SEQRES 10 B 261 GLU VAL LEU ALA ARG TYR ARG GLU ILE VAL PRO GLN LEU SEQRES 11 B 261 LYS LEU ALA GLY PRO THR SER PHE ALA PRO ILE ILE GLU SEQRES 12 B 261 MET ALA MET THR VAL VAL GLU GLN SER SER GLY GLN TYR SEQRES 13 B 261 HIS VAL LEU VAL ILE ILE ALA ASP GLY GLN VAL THR ARG SEQRES 14 B 261 SER VAL ASP THR GLU HIS GLY ARG LEU SER PRO GLN GLU SEQRES 15 B 261 GLN LYS THR VAL ASP ALA ILE VAL LYS ALA SER THR LEU SEQRES 16 B 261 PRO LEU SER ILE VAL LEU VAL GLY VAL GLY ASP GLY PRO SEQRES 17 B 261 TRP ASP MET MET GLN GLU PHE ASP ASP ASN ILE PRO ALA SEQRES 18 B 261 ARG ALA PHE ASP ASN PHE GLN PHE VAL ASN PHE THR GLU SEQRES 19 B 261 ILE MET SER LYS ASN LYS ASP GLN SER ARG LYS GLU THR SEQRES 20 B 261 GLU PHE ALA LEU SER ALA LEU MET GLU ILE PRO PRO GLN SEQRES 21 B 261 TYR HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA B 401 1 HET CA B 402 1 HET CA B 403 1 HET CA B 404 1 HETNAM CA CALCIUM ION FORMUL 3 CA 8(CA 2+) FORMUL 11 HOH *389(H2 O) HELIX 1 AA1 THR A 164 TRP A 169 5 6 HELIX 2 AA2 ASN A 188 THR A 200 1 13 HELIX 3 AA3 LEU A 201 ASP A 205 5 5 HELIX 4 AA4 GLY A 237 VAL A 249 1 13 HELIX 5 AA5 PRO A 250 LEU A 252 5 3 HELIX 6 AA6 PHE A 260 SER A 274 1 15 HELIX 7 AA7 ASP A 294 GLY A 298 5 5 HELIX 8 AA8 SER A 301 SER A 315 1 15 HELIX 9 AA9 TRP A 331 ASN A 340 1 10 HELIX 10 AB1 PHE A 354 SER A 359 1 6 HELIX 11 AB2 ASP A 363 LEU A 376 1 14 HELIX 12 AB3 THR B 164 TRP B 169 5 6 HELIX 13 AB4 ASN B 188 LEU B 201 1 14 HELIX 14 AB5 ALA B 202 ASP B 205 5 4 HELIX 15 AB6 GLY B 237 VAL B 249 1 13 HELIX 16 AB7 PRO B 250 LEU B 252 5 3 HELIX 17 AB8 PHE B 260 SER B 274 1 15 HELIX 18 AB9 SER B 301 SER B 315 1 15 HELIX 19 AC1 TRP B 331 ASN B 340 1 10 HELIX 20 AC2 PHE B 354 SER B 359 1 6 HELIX 21 AC3 ASP B 363 LEU B 376 1 14 SHEET 1 AA1 6 PHE A 226 SER A 227 0 SHEET 2 AA1 6 CYS A 212 PHE A 215 -1 N GLY A 214 O PHE A 226 SHEET 3 AA1 6 ASN A 156 ASP A 162 1 N ILE A 161 O TYR A 213 SHEET 4 AA1 6 HIS A 279 ALA A 285 1 O VAL A 282 N ILE A 158 SHEET 5 AA1 6 LEU A 319 GLY A 325 1 O VAL A 322 N LEU A 281 SHEET 6 AA1 6 PHE A 349 ASN A 353 1 O GLN A 350 N LEU A 323 SHEET 1 AA2 2 LEU A 209 ILE A 210 0 SHEET 2 AA2 2 CYS A 235 ASN A 236 -1 O CYS A 235 N ILE A 210 SHEET 1 AA3 6 VAL B 225 SER B 227 0 SHEET 2 AA3 6 CYS B 212 PHE B 215 -1 N GLY B 214 O PHE B 226 SHEET 3 AA3 6 ASN B 156 ASP B 162 1 N ILE B 161 O TYR B 213 SHEET 4 AA3 6 HIS B 279 ALA B 285 1 O VAL B 282 N ILE B 158 SHEET 5 AA3 6 LEU B 319 GLY B 325 1 O VAL B 322 N LEU B 281 SHEET 6 AA3 6 PHE B 349 ASN B 353 1 O GLN B 350 N LEU B 323 SHEET 1 AA4 2 LEU B 209 ILE B 210 0 SHEET 2 AA4 2 CYS B 235 ASN B 236 -1 O CYS B 235 N ILE B 210 LINK OD1 ASN A 156 CA CA A 401 1555 1555 2.40 LINK OG1 THR A 164 CA CA A 402 1555 1555 2.54 LINK OG SER A 166 CA CA A 402 1555 1555 2.54 LINK OD1 ASP A 205 CA CA A 401 1555 1555 2.51 LINK OD2 ASP A 205 CA CA A 401 1555 1555 2.52 LINK OD1 ASP A 207 CA CA A 401 1555 1555 2.40 LINK O LEU A 209 CA CA A 401 1555 1555 2.33 LINK OG1 THR A 258 CA CA A 402 1555 1555 2.34 LINK O GLN A 288 CA CA A 402 1555 1555 2.65 LINK OE2 GLU A 296 CA CA B 404 1555 2455 2.34 LINK OD1 ASP A 338 CA CA A 403 1555 1555 2.56 LINK OD2 ASP A 338 CA CA A 403 1555 1555 2.46 LINK O ASP A 338 CA CA A 404 1555 1555 2.37 LINK OD1 ASP A 338 CA CA A 404 1555 1555 2.26 LINK OD1 ASP A 347 CA CA A 404 1555 1555 2.41 LINK OD2 ASP A 347 CA CA A 404 1555 1555 2.47 LINK O PHE A 349 CA CA A 404 1555 1555 2.44 LINK OE1 GLN A 350 CA CA A 403 1555 1555 2.27 LINK OE2 GLU A 378 CA CA A 403 1555 1555 2.36 LINK OE1 GLU A 378 CA CA A 404 1555 1555 2.33 LINK OE2 GLU A 378 CA CA A 404 1555 1555 2.69 LINK CA CA A 401 O HOH A 643 1555 1555 2.38 LINK CA CA A 401 O HOH A 650 1555 1555 2.42 LINK CA CA A 402 O HOH A 518 1555 1555 2.37 LINK CA CA A 402 O HOH A 568 1555 1555 2.44 LINK CA CA A 402 OE2 GLU B 296 2454 1555 2.39 LINK CA CA A 403 O HOH A 549 1555 1555 2.42 LINK CA CA A 403 O HOH A 611 1555 1555 2.28 LINK CA CA A 403 O HOH A 652 1555 1555 2.43 LINK CA CA A 404 O HOH A 570 1555 1555 2.45 LINK OD1 ASN B 156 CA CA B 403 1555 1555 2.59 LINK OG1 THR B 164 CA CA B 404 1555 1555 2.46 LINK OG SER B 166 CA CA B 404 1555 1555 2.37 LINK OD1 ASP B 205 CA CA B 403 1555 1555 2.46 LINK OD2 ASP B 205 CA CA B 403 1555 1555 2.43 LINK OD1 ASP B 207 CA CA B 403 1555 1555 2.35 LINK O LEU B 209 CA CA B 403 1555 1555 2.30 LINK OG1 THR B 258 CA CA B 404 1555 1555 2.41 LINK O GLN B 288 CA CA B 404 1555 1555 2.64 LINK O ASP B 338 CA CA B 401 1555 1555 2.36 LINK OD1 ASP B 338 CA CA B 401 1555 1555 2.30 LINK OD1 ASP B 338 CA CA B 402 1555 1555 2.65 LINK OD2 ASP B 338 CA CA B 402 1555 1555 2.55 LINK OD1 ASP B 347 CA CA B 401 1555 1555 2.45 LINK OD2 ASP B 347 CA CA B 401 1555 1555 2.49 LINK O PHE B 349 CA CA B 401 1555 1555 2.40 LINK OE1 GLN B 350 CA CA B 402 1555 1555 2.27 LINK OE1 GLU B 378 CA CA B 401 1555 1555 2.36 LINK OE2 GLU B 378 CA CA B 401 1555 1555 2.63 LINK OE2 GLU B 378 CA CA B 402 1555 1555 2.40 LINK CA CA B 401 O HOH B 548 1555 1555 2.61 LINK CA CA B 402 O HOH B 534 1555 1555 2.40 LINK CA CA B 402 O HOH B 606 1555 1555 2.34 LINK CA CA B 402 O HOH B 639 1555 1555 2.36 LINK CA CA B 403 O HOH B 583 1555 1555 2.37 LINK CA CA B 403 O HOH B 611 1555 1555 2.39 LINK CA CA B 404 O HOH B 529 1555 1555 2.39 LINK CA CA B 404 O HOH B 586 1555 1555 2.59 CISPEP 1 GLY A 256 PRO A 257 0 1.76 CISPEP 2 GLY A 329 PRO A 330 0 6.68 CISPEP 3 GLY B 256 PRO B 257 0 1.37 CISPEP 4 GLY B 329 PRO B 330 0 5.98 SITE 1 AC1 6 ASN A 156 ASP A 205 ASP A 207 LEU A 209 SITE 2 AC1 6 HOH A 643 HOH A 650 SITE 1 AC2 7 THR A 164 SER A 166 THR A 258 GLN A 288 SITE 2 AC2 7 HOH A 518 HOH A 568 GLU B 296 SITE 1 AC3 6 ASP A 338 GLN A 350 GLU A 378 HOH A 549 SITE 2 AC3 6 HOH A 611 HOH A 652 SITE 1 AC4 5 ASP A 338 ASP A 347 PHE A 349 GLU A 378 SITE 2 AC4 5 HOH A 570 SITE 1 AC5 5 ASP B 338 ASP B 347 PHE B 349 GLU B 378 SITE 2 AC5 5 HOH B 548 SITE 1 AC6 6 ASP B 338 GLN B 350 GLU B 378 HOH B 534 SITE 2 AC6 6 HOH B 606 HOH B 639 SITE 1 AC7 6 ASN B 156 ASP B 205 ASP B 207 LEU B 209 SITE 2 AC7 6 HOH B 583 HOH B 611 SITE 1 AC8 7 GLU A 296 THR B 164 SER B 166 THR B 258 SITE 2 AC8 7 GLN B 288 HOH B 529 HOH B 586 CRYST1 42.876 70.727 146.403 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023323 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014139 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006830 0.00000