HEADER TRANSFERASE 11-JUN-19 6K8B TITLE THE OPEN STATE OF RGLG1 VWA DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RGLG1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RING DOMAIN LIGASE 1; COMPND 5 EC: 2.3.2.27; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: RGLG1, AT3G01650, F4P13.19; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ROSSMANN, CALCIUM IONS, PLANT PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.WANG,Y.WU REVDAT 2 27-MAR-24 6K8B 1 LINK REVDAT 1 24-JUN-20 6K8B 0 JRNL AUTH Q.WANG,Y.WU JRNL TITL THE OPEN STATE OF RGLG1 VWA DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 52048 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9734 - 5.8940 0.97 2684 143 0.1420 0.1426 REMARK 3 2 5.8940 - 4.6794 0.97 2607 125 0.1425 0.1536 REMARK 3 3 4.6794 - 4.0882 1.00 2632 150 0.1257 0.1304 REMARK 3 4 4.0882 - 3.7146 1.00 2647 137 0.1432 0.1634 REMARK 3 5 3.7146 - 3.4484 1.00 2659 135 0.1621 0.1878 REMARK 3 6 3.4484 - 3.2451 1.00 2638 117 0.1783 0.2025 REMARK 3 7 3.2451 - 3.0826 0.98 2593 141 0.1902 0.2211 REMARK 3 8 3.0826 - 2.9485 0.93 2451 111 0.1941 0.2091 REMARK 3 9 2.9485 - 2.8350 1.00 2573 147 0.1799 0.2028 REMARK 3 10 2.8350 - 2.7372 1.00 2670 120 0.1847 0.2255 REMARK 3 11 2.7372 - 2.6516 0.99 2616 140 0.1807 0.2189 REMARK 3 12 2.6516 - 2.5758 0.99 2564 144 0.1920 0.2735 REMARK 3 13 2.5758 - 2.5080 1.00 2612 138 0.1993 0.2513 REMARK 3 14 2.5080 - 2.4468 0.99 2581 152 0.1986 0.2371 REMARK 3 15 2.4468 - 2.3912 1.00 2599 144 0.2065 0.2618 REMARK 3 16 2.3912 - 2.3403 0.98 2543 145 0.2157 0.2601 REMARK 3 17 2.3403 - 2.2935 1.00 2614 138 0.2278 0.3214 REMARK 3 18 2.2935 - 2.2502 0.98 2557 142 0.2398 0.2872 REMARK 3 19 2.2502 - 2.2100 1.00 2607 132 0.2610 0.2965 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4466 REMARK 3 ANGLE : 1.140 6068 REMARK 3 CHIRALITY : 0.040 678 REMARK 3 PLANARITY : 0.005 806 REMARK 3 DIHEDRAL : 13.537 1658 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K8B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1300012415. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AICHISR REMARK 200 BEAMLINE : BL2S1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97889 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52083 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 48.962 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 13.70 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : 1.10600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MAGNESIUM CHLORIDE , 0.1 MSODIUM REMARK 280 CHLORIDE, 10%(W/V) PEG1500, 5%(W/V) ETHANOL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.43000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 14.21500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.64500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 90 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 119 REMARK 465 THR A 120 REMARK 465 SER A 121 REMARK 465 SER A 122 REMARK 465 MET A 123 REMARK 465 ALA A 124 REMARK 465 ASP A 125 REMARK 465 ILE A 126 REMARK 465 GLY A 127 REMARK 465 SER A 128 REMARK 465 ARG A 129 REMARK 465 TYR A 130 REMARK 465 SER A 411 REMARK 465 GLY A 412 REMARK 465 SER A 413 REMARK 465 SER A 414 REMARK 465 PHE A 415 REMARK 465 SER A 416 REMARK 465 SER A 417 REMARK 465 SER A 418 REMARK 465 ARG A 419 REMARK 465 GLY B 119 REMARK 465 THR B 120 REMARK 465 SER B 121 REMARK 465 SER B 122 REMARK 465 MET B 123 REMARK 465 ALA B 124 REMARK 465 ASP B 125 REMARK 465 ILE B 126 REMARK 465 GLY B 127 REMARK 465 SER B 128 REMARK 465 ARG B 129 REMARK 465 TYR B 130 REMARK 465 SER B 411 REMARK 465 GLY B 412 REMARK 465 SER B 413 REMARK 465 SER B 414 REMARK 465 PHE B 415 REMARK 465 SER B 416 REMARK 465 SER B 417 REMARK 465 SER B 418 REMARK 465 ARG B 419 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 368 O HOH A 601 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 177 12.80 58.28 REMARK 500 SER A 184 -144.63 -163.18 REMARK 500 HIS A 221 -128.61 45.82 REMARK 500 ALA A 255 -131.41 -140.14 REMARK 500 THR A 295 130.43 -30.05 REMARK 500 ASN A 361 87.51 -69.01 REMARK 500 PHE B 175 36.42 -142.99 REMARK 500 SER B 184 -155.04 -167.77 REMARK 500 HIS B 221 -132.35 45.92 REMARK 500 ALA B 255 -133.16 -144.46 REMARK 500 THR B 295 116.16 -11.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 747 DISTANCE = 6.71 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 153 OE2 REMARK 620 2 THR B 164 OG1 47.8 REMARK 620 3 SER B 166 OG 46.8 1.6 REMARK 620 4 THR B 258 OG1 49.5 2.4 2.7 REMARK 620 5 HOH B 604 O 49.0 3.0 2.7 1.2 REMARK 620 6 HOH B 607 O 46.9 2.1 0.7 2.6 2.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 156 OD1 REMARK 620 2 ASP A 205 OD1 95.1 REMARK 620 3 ASP A 205 OD2 85.3 53.2 REMARK 620 4 ASP A 207 OD1 85.7 67.2 118.4 REMARK 620 5 LEU A 209 O 176.2 88.7 96.7 96.2 REMARK 620 6 HOH A 645 O 89.6 127.0 74.7 165.4 87.9 REMARK 620 7 HOH A 701 O 79.1 151.0 151.8 83.9 97.7 81.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 164 OG1 REMARK 620 2 SER A 166 OG 86.9 REMARK 620 3 THR A 258 OG1 89.7 174.0 REMARK 620 4 HOH A 604 O 77.5 80.3 103.8 REMARK 620 5 HOH A 607 O 162.1 94.9 86.9 120.4 REMARK 620 6 GLU B 153 OE2 86.1 90.1 84.8 161.4 76.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 338 O REMARK 620 2 ASP A 338 OD1 74.5 REMARK 620 3 ASP A 347 OD1 82.5 148.8 REMARK 620 4 ASP A 347 OD2 89.2 145.1 52.7 REMARK 620 5 PHE A 349 O 91.3 75.4 84.5 136.8 REMARK 620 6 GLU A 378 OE1 165.3 118.1 83.0 83.6 85.3 REMARK 620 7 GLU A 378 OE2 144.2 74.2 132.8 107.2 97.2 50.5 REMARK 620 8 HOH A 652 O 83.3 70.1 128.2 77.6 145.3 107.6 70.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 338 OD1 REMARK 620 2 ASP A 338 OD2 50.3 REMARK 620 3 GLN A 350 OE1 85.8 81.0 REMARK 620 4 GLU A 378 OE2 73.3 120.7 78.0 REMARK 620 5 HOH A 617 O 95.5 70.6 141.0 139.7 REMARK 620 6 HOH A 620 O 142.7 156.6 114.8 80.9 87.1 REMARK 620 7 HOH A 652 O 65.0 96.9 141.5 70.1 70.0 81.4 REMARK 620 8 HOH A 694 O 138.9 90.5 74.7 134.1 79.4 78.1 143.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 503 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 156 OD1 REMARK 620 2 ASP B 205 OD1 96.5 REMARK 620 3 ASP B 205 OD2 89.4 51.9 REMARK 620 4 ASP B 207 OD1 89.0 66.5 117.7 REMARK 620 5 LEU B 209 O 177.1 80.7 89.5 89.0 REMARK 620 6 HOH B 639 O 86.6 146.3 161.7 80.1 95.2 REMARK 620 7 HOH B 674 O 93.2 128.4 77.7 164.4 89.2 84.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 338 OD1 REMARK 620 2 ASP B 338 OD2 50.0 REMARK 620 3 GLN B 350 OE1 90.5 81.5 REMARK 620 4 GLU B 378 OE2 74.6 121.1 80.4 REMARK 620 5 HOH B 608 O 144.7 158.2 109.3 80.1 REMARK 620 6 HOH B 630 O 63.7 99.8 141.3 65.7 83.6 REMARK 620 7 HOH B 642 O 97.6 75.6 141.6 137.9 84.9 73.7 REMARK 620 8 HOH B 670 O 142.5 92.9 77.0 135.4 72.1 140.8 73.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 338 O REMARK 620 2 ASP B 338 OD1 70.4 REMARK 620 3 ASP B 347 OD1 85.2 147.3 REMARK 620 4 ASP B 347 OD2 86.4 141.5 53.2 REMARK 620 5 PHE B 349 O 95.5 77.7 83.6 136.6 REMARK 620 6 GLU B 378 OE1 167.0 117.1 83.6 92.2 76.7 REMARK 620 7 GLU B 378 OE2 141.2 76.5 132.7 108.6 96.8 51.2 REMARK 620 8 HOH B 630 O 79.4 72.2 125.4 73.6 149.4 112.6 71.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 504 DBREF 6K8B A 129 419 UNP Q9SS90 RGLG1_ARATH 129 419 DBREF 6K8B B 129 419 UNP Q9SS90 RGLG1_ARATH 129 419 SEQADV 6K8B GLY A 119 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B THR A 120 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B SER A 121 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B SER A 122 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B MET A 123 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B ALA A 124 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B ASP A 125 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B ILE A 126 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B GLY A 127 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B SER A 128 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B GLY B 119 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B THR B 120 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B SER B 121 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B SER B 122 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B MET B 123 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B ALA B 124 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B ASP B 125 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B ILE B 126 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B GLY B 127 UNP Q9SS90 EXPRESSION TAG SEQADV 6K8B SER B 128 UNP Q9SS90 EXPRESSION TAG SEQRES 1 A 301 GLY THR SER SER MET ALA ASP ILE GLY SER ARG TYR SER SEQRES 2 A 301 LYS ILE SER ASP ASN TYR SER SER LEU LEU GLN VAL SER SEQRES 3 A 301 GLU ALA LEU GLY ARG ALA GLY LEU GLU SER SER ASN LEU SEQRES 4 A 301 ILE VAL GLY ILE ASP PHE THR LYS SER ASN GLU TRP THR SEQRES 5 A 301 GLY ALA LYS SER PHE ASN ARG LYS SER LEU HIS HIS LEU SEQRES 6 A 301 SER ASN THR PRO ASN PRO TYR GLU GLN ALA ILE THR ILE SEQRES 7 A 301 ILE GLY ARG THR LEU ALA ALA PHE ASP GLU ASP ASN LEU SEQRES 8 A 301 ILE PRO CYS TYR GLY PHE GLY ASP ALA SER THR HIS ASP SEQRES 9 A 301 GLN ASP VAL PHE SER PHE TYR PRO GLU GLY ARG PHE CYS SEQRES 10 A 301 ASN GLY PHE GLU GLU VAL LEU ALA ARG TYR ARG GLU ILE SEQRES 11 A 301 VAL PRO GLN LEU LYS LEU ALA GLY PRO THR SER PHE ALA SEQRES 12 A 301 PRO ILE ILE GLU MET ALA MET THR VAL VAL GLU GLN SER SEQRES 13 A 301 SER GLY GLN TYR HIS VAL LEU VAL ILE ILE ALA ASP GLY SEQRES 14 A 301 GLN VAL THR ARG SER VAL ASP THR GLU HIS GLY ARG LEU SEQRES 15 A 301 SER PRO GLN GLU GLN LYS THR VAL ASP ALA ILE VAL LYS SEQRES 16 A 301 ALA SER THR LEU PRO LEU SER ILE VAL LEU VAL GLY VAL SEQRES 17 A 301 GLY ASP GLY PRO TRP ASP MET MET GLN GLU PHE ASP ASP SEQRES 18 A 301 ASN ILE PRO ALA ARG ALA PHE ASP ASN PHE GLN PHE VAL SEQRES 19 A 301 ASN PHE THR GLU ILE MET SER LYS ASN LYS ASP GLN SER SEQRES 20 A 301 ARG LYS GLU THR GLU PHE ALA LEU SER ALA LEU MET GLU SEQRES 21 A 301 ILE PRO PRO GLN TYR LYS ALA THR ILE GLU LEU ASN LEU SEQRES 22 A 301 LEU GLY VAL ARG ASN GLY ASN ILE PRO GLN ARG ILE PRO SEQRES 23 A 301 LEU PRO PRO PRO VAL GLN SER GLY SER SER PHE SER SER SEQRES 24 A 301 SER ARG SEQRES 1 B 301 GLY THR SER SER MET ALA ASP ILE GLY SER ARG TYR SER SEQRES 2 B 301 LYS ILE SER ASP ASN TYR SER SER LEU LEU GLN VAL SER SEQRES 3 B 301 GLU ALA LEU GLY ARG ALA GLY LEU GLU SER SER ASN LEU SEQRES 4 B 301 ILE VAL GLY ILE ASP PHE THR LYS SER ASN GLU TRP THR SEQRES 5 B 301 GLY ALA LYS SER PHE ASN ARG LYS SER LEU HIS HIS LEU SEQRES 6 B 301 SER ASN THR PRO ASN PRO TYR GLU GLN ALA ILE THR ILE SEQRES 7 B 301 ILE GLY ARG THR LEU ALA ALA PHE ASP GLU ASP ASN LEU SEQRES 8 B 301 ILE PRO CYS TYR GLY PHE GLY ASP ALA SER THR HIS ASP SEQRES 9 B 301 GLN ASP VAL PHE SER PHE TYR PRO GLU GLY ARG PHE CYS SEQRES 10 B 301 ASN GLY PHE GLU GLU VAL LEU ALA ARG TYR ARG GLU ILE SEQRES 11 B 301 VAL PRO GLN LEU LYS LEU ALA GLY PRO THR SER PHE ALA SEQRES 12 B 301 PRO ILE ILE GLU MET ALA MET THR VAL VAL GLU GLN SER SEQRES 13 B 301 SER GLY GLN TYR HIS VAL LEU VAL ILE ILE ALA ASP GLY SEQRES 14 B 301 GLN VAL THR ARG SER VAL ASP THR GLU HIS GLY ARG LEU SEQRES 15 B 301 SER PRO GLN GLU GLN LYS THR VAL ASP ALA ILE VAL LYS SEQRES 16 B 301 ALA SER THR LEU PRO LEU SER ILE VAL LEU VAL GLY VAL SEQRES 17 B 301 GLY ASP GLY PRO TRP ASP MET MET GLN GLU PHE ASP ASP SEQRES 18 B 301 ASN ILE PRO ALA ARG ALA PHE ASP ASN PHE GLN PHE VAL SEQRES 19 B 301 ASN PHE THR GLU ILE MET SER LYS ASN LYS ASP GLN SER SEQRES 20 B 301 ARG LYS GLU THR GLU PHE ALA LEU SER ALA LEU MET GLU SEQRES 21 B 301 ILE PRO PRO GLN TYR LYS ALA THR ILE GLU LEU ASN LEU SEQRES 22 B 301 LEU GLY VAL ARG ASN GLY ASN ILE PRO GLN ARG ILE PRO SEQRES 23 B 301 LEU PRO PRO PRO VAL GLN SER GLY SER SER PHE SER SER SEQRES 24 B 301 SER ARG HET CA A 501 1 HET CA A 502 1 HET CA A 503 1 HET MG A 504 1 HET CA B 501 1 HET CA B 502 1 HET CA B 503 1 HET MG B 504 1 HETNAM CA CALCIUM ION HETNAM MG MAGNESIUM ION FORMUL 3 CA 6(CA 2+) FORMUL 6 MG 2(MG 2+) FORMUL 11 HOH *286(H2 O) HELIX 1 AA1 SER A 139 GLY A 151 1 13 HELIX 2 AA2 THR A 164 TRP A 169 5 6 HELIX 3 AA3 ASN A 188 LEU A 201 1 14 HELIX 4 AA4 ALA A 202 ASP A 205 5 4 HELIX 5 AA5 GLY A 237 VAL A 249 1 13 HELIX 6 AA6 PRO A 250 LEU A 252 5 3 HELIX 7 AA7 PHE A 260 SER A 274 1 15 HELIX 8 AA8 SER A 301 SER A 315 1 15 HELIX 9 AA9 TRP A 331 ASN A 340 1 10 HELIX 10 AB1 PHE A 354 LYS A 360 1 7 HELIX 11 AB2 ASP A 363 MET A 377 1 15 HELIX 12 AB3 GLU A 378 LEU A 389 1 12 HELIX 13 AB4 SER B 139 GLY B 151 1 13 HELIX 14 AB5 THR B 164 TRP B 169 5 6 HELIX 15 AB6 ASN B 188 LEU B 201 1 14 HELIX 16 AB7 ALA B 202 ASP B 205 5 4 HELIX 17 AB8 GLY B 237 VAL B 249 1 13 HELIX 18 AB9 PRO B 250 LEU B 252 5 3 HELIX 19 AC1 PHE B 260 SER B 274 1 15 HELIX 20 AC2 SER B 301 SER B 315 1 15 HELIX 21 AC3 TRP B 331 ASN B 340 1 10 HELIX 22 AC4 PHE B 354 SER B 359 1 6 HELIX 23 AC5 ASP B 363 MET B 377 1 15 HELIX 24 AC6 GLU B 378 LEU B 389 1 12 SHEET 1 AA1 6 PHE A 226 SER A 227 0 SHEET 2 AA1 6 CYS A 212 PHE A 215 -1 N GLY A 214 O PHE A 226 SHEET 3 AA1 6 ASN A 156 ASP A 162 1 N VAL A 159 O TYR A 213 SHEET 4 AA1 6 HIS A 279 ALA A 285 1 O VAL A 282 N ILE A 158 SHEET 5 AA1 6 LEU A 319 GLY A 325 1 O SER A 320 N LEU A 281 SHEET 6 AA1 6 PHE A 349 ASN A 353 1 O VAL A 352 N LEU A 323 SHEET 1 AA2 2 LEU A 209 ILE A 210 0 SHEET 2 AA2 2 CYS A 235 ASN A 236 -1 O CYS A 235 N ILE A 210 SHEET 1 AA3 6 PHE B 226 SER B 227 0 SHEET 2 AA3 6 CYS B 212 PHE B 215 -1 N GLY B 214 O PHE B 226 SHEET 3 AA3 6 ASN B 156 ASP B 162 1 N VAL B 159 O TYR B 213 SHEET 4 AA3 6 HIS B 279 ALA B 285 1 O VAL B 282 N ILE B 158 SHEET 5 AA3 6 LEU B 319 GLY B 325 1 O SER B 320 N LEU B 281 SHEET 6 AA3 6 PHE B 349 ASN B 353 1 O GLN B 350 N LEU B 323 SHEET 1 AA4 2 LEU B 209 ILE B 210 0 SHEET 2 AA4 2 CYS B 235 ASN B 236 -1 O CYS B 235 N ILE B 210 LINK OE2 GLU A 153 MG MG B 504 1555 4454 2.35 LINK OD1 ASN A 156 CA CA A 503 1555 1555 2.62 LINK OG1 THR A 164 MG MG A 504 1555 1555 2.38 LINK OG SER A 166 MG MG A 504 1555 1555 2.42 LINK OD1 ASP A 205 CA CA A 503 1555 1555 2.51 LINK OD2 ASP A 205 CA CA A 503 1555 1555 2.41 LINK OD1 ASP A 207 CA CA A 503 1555 1555 2.50 LINK O LEU A 209 CA CA A 503 1555 1555 2.28 LINK OG1 THR A 258 MG MG A 504 1555 1555 2.23 LINK O ASP A 338 CA CA A 501 1555 1555 2.43 LINK OD1 ASP A 338 CA CA A 501 1555 1555 2.33 LINK OD1 ASP A 338 CA CA A 502 1555 1555 2.54 LINK OD2 ASP A 338 CA CA A 502 1555 1555 2.62 LINK OD1 ASP A 347 CA CA A 501 1555 1555 2.49 LINK OD2 ASP A 347 CA CA A 501 1555 1555 2.47 LINK O PHE A 349 CA CA A 501 1555 1555 2.36 LINK OE1 GLN A 350 CA CA A 502 1555 1555 2.32 LINK OE1 GLU A 378 CA CA A 501 1555 1555 2.66 LINK OE2 GLU A 378 CA CA A 501 1555 1555 2.47 LINK OE2 GLU A 378 CA CA A 502 1555 1555 2.30 LINK CA CA A 501 O HOH A 652 1555 1555 2.57 LINK CA CA A 502 O HOH A 617 1555 1555 2.44 LINK CA CA A 502 O HOH A 620 1555 1555 2.55 LINK CA CA A 502 O HOH A 652 1555 1555 2.70 LINK CA CA A 502 O HOH A 694 1555 1555 2.47 LINK CA CA A 503 O HOH A 645 1555 1555 2.47 LINK CA CA A 503 O HOH A 701 1555 1555 2.46 LINK MG MG A 504 O HOH A 604 1555 1555 2.30 LINK MG MG A 504 O HOH A 607 1555 1555 2.72 LINK MG MG A 504 OE2 GLU B 153 1555 1555 2.43 LINK OD1 ASN B 156 CA CA B 503 1555 1555 2.37 LINK OG1 THR B 164 MG MG B 504 1555 1555 2.32 LINK OG SER B 166 MG MG B 504 1555 1555 2.39 LINK OD1 ASP B 205 CA CA B 503 1555 1555 2.56 LINK OD2 ASP B 205 CA CA B 503 1555 1555 2.46 LINK OD1 ASP B 207 CA CA B 503 1555 1555 2.46 LINK O LEU B 209 CA CA B 503 1555 1555 2.35 LINK OG1 THR B 258 MG MG B 504 1555 1555 2.27 LINK OD1 ASP B 338 CA CA B 501 1555 1555 2.52 LINK OD2 ASP B 338 CA CA B 501 1555 1555 2.58 LINK O ASP B 338 CA CA B 502 1555 1555 2.38 LINK OD1 ASP B 338 CA CA B 502 1555 1555 2.35 LINK OD1 ASP B 347 CA CA B 502 1555 1555 2.49 LINK OD2 ASP B 347 CA CA B 502 1555 1555 2.44 LINK O PHE B 349 CA CA B 502 1555 1555 2.38 LINK OE1 GLN B 350 CA CA B 501 1555 1555 2.39 LINK OE2 GLU B 378 CA CA B 501 1555 1555 2.35 LINK OE1 GLU B 378 CA CA B 502 1555 1555 2.59 LINK OE2 GLU B 378 CA CA B 502 1555 1555 2.42 LINK CA CA B 501 O HOH B 608 1555 1555 2.51 LINK CA CA B 501 O HOH B 630 1555 1555 2.95 LINK CA CA B 501 O HOH B 642 1555 1555 2.38 LINK CA CA B 501 O HOH B 670 1555 1555 2.52 LINK CA CA B 502 O HOH B 630 1555 1555 2.58 LINK CA CA B 503 O HOH B 639 1555 1555 2.42 LINK CA CA B 503 O HOH B 674 1555 1555 2.41 LINK MG MG B 504 O HOH B 604 1555 1555 2.63 LINK MG MG B 504 O HOH B 607 1555 1555 2.31 CISPEP 1 GLY A 256 PRO A 257 0 -3.13 CISPEP 2 GLU A 296 HIS A 297 0 -24.63 CISPEP 3 GLY A 329 PRO A 330 0 3.68 CISPEP 4 GLY B 256 PRO B 257 0 -2.00 CISPEP 5 ASP B 294 THR B 295 0 11.56 CISPEP 6 GLY B 329 PRO B 330 0 1.90 SITE 1 AC1 6 ASP A 338 ASP A 347 PHE A 349 GLU A 378 SITE 2 AC1 6 CA A 502 HOH A 652 SITE 1 AC2 8 ASP A 338 GLN A 350 GLU A 378 CA A 501 SITE 2 AC2 8 HOH A 617 HOH A 620 HOH A 652 HOH A 694 SITE 1 AC3 6 ASN A 156 ASP A 205 ASP A 207 LEU A 209 SITE 2 AC3 6 HOH A 645 HOH A 701 SITE 1 AC4 7 THR A 164 SER A 166 THR A 258 GLN A 288 SITE 2 AC4 7 HOH A 604 HOH A 607 GLU B 153 SITE 1 AC5 8 ASP B 338 GLN B 350 GLU B 378 CA B 502 SITE 2 AC5 8 HOH B 608 HOH B 630 HOH B 642 HOH B 670 SITE 1 AC6 6 ASP B 338 ASP B 347 PHE B 349 GLU B 378 SITE 2 AC6 6 CA B 501 HOH B 630 SITE 1 AC7 6 ASN B 156 ASP B 205 ASP B 207 LEU B 209 SITE 2 AC7 6 HOH B 639 HOH B 674 SITE 1 AC8 7 GLU A 153 THR B 164 SER B 166 THR B 258 SITE 2 AC8 7 GLN B 288 HOH B 604 HOH B 607 CRYST1 136.180 136.180 56.860 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007343 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017587 0.00000