HEADER CELL INVASION 14-JUN-19 6K93 TITLE CRYSTAL STRUCTURE OF THE TYPE III EFFECTOR XOPAI FROM XANTHOMONAS TITLE 2 AXONOPODIS PV. CITRI IN SPACE GROUP P41212 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE III EFFECTOR XOPAI; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS CITRI; SOURCE 3 ORGANISM_TAXID: 346; SOURCE 4 STRAIN: XW19; SOURCE 5 GENE: XOPAI, XAC3230; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: RIL+; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS TYPE III EFFECTORS, PEPTIDE-BINDING DOMAIN, MONO-ADP- KEYWDS 2 RIBOSYLTRANSFERASE FOLD, XANTHOMONAS AXONOPODIS PV. CITRI, CELL KEYWDS 3 INVASION EXPDTA X-RAY DIFFRACTION AUTHOR J.-H.LIU,Y.H.LAI,J.-Y.YANG,M.-H.HOU REVDAT 2 22-NOV-23 6K93 1 REMARK REVDAT 1 30-OCT-19 6K93 0 JRNL AUTH J.H.LIU,J.Y.YANG,D.W.HSU,Y.H.LAI,Y.P.LI,Y.R.TSAI,M.H.HOU JRNL TITL CRYSTAL STRUCTURE-BASED EXPLORATION OF ARGININE-CONTAINING JRNL TITL 2 PEPTIDE BINDING IN THE ADP-RIBOSYLTRANSFERASE DOMAIN OF THE JRNL TITL 3 TYPE III EFFECTOR XOPAI PROTEIN. JRNL REF INT J MOL SCI V. 20 2019 JRNL REFN ESSN 1422-0067 JRNL PMID 31615004 JRNL DOI 10.3390/IJMS20205085 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 46850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 58:74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8376 15.7335 -40.6888 REMARK 3 T TENSOR REMARK 3 T11: 0.2200 T22: 0.1468 REMARK 3 T33: 0.1060 T12: -0.0346 REMARK 3 T13: -0.0491 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 0.1749 L22: 1.2925 REMARK 3 L33: 0.3459 L12: -0.1503 REMARK 3 L13: -0.3098 L23: 0.2628 REMARK 3 S TENSOR REMARK 3 S11: -0.2165 S12: 0.2571 S13: 0.1357 REMARK 3 S21: -0.2939 S22: 0.0058 S23: 0.3180 REMARK 3 S31: -0.4332 S32: -0.0335 S33: -0.2083 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 75:112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0153 26.0059 -28.3217 REMARK 3 T TENSOR REMARK 3 T11: 0.1385 T22: 0.1718 REMARK 3 T33: 0.1219 T12: 0.0201 REMARK 3 T13: -0.0204 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.7935 L22: 0.6206 REMARK 3 L33: 1.0916 L12: 0.5219 REMARK 3 L13: 0.2716 L23: 0.0973 REMARK 3 S TENSOR REMARK 3 S11: -0.0434 S12: 0.1362 S13: 0.0533 REMARK 3 S21: -0.2244 S22: 0.0491 S23: 0.1243 REMARK 3 S31: -0.1996 S32: -0.2050 S33: 0.0198 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 113:136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4345 7.8215 -22.6167 REMARK 3 T TENSOR REMARK 3 T11: 0.1179 T22: 0.1868 REMARK 3 T33: 0.1483 T12: -0.0280 REMARK 3 T13: -0.0025 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.2713 L22: 0.7644 REMARK 3 L33: 0.1494 L12: 0.1266 REMARK 3 L13: 0.2695 L23: 0.0863 REMARK 3 S TENSOR REMARK 3 S11: 0.0562 S12: 0.0237 S13: -0.0464 REMARK 3 S21: 0.0614 S22: 0.0159 S23: -0.0112 REMARK 3 S31: 0.1488 S32: -0.0524 S33: 0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 137:161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1920 17.2257 -17.2951 REMARK 3 T TENSOR REMARK 3 T11: 0.0796 T22: 0.1732 REMARK 3 T33: 0.1113 T12: 0.0026 REMARK 3 T13: -0.0040 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.2118 L22: 0.6951 REMARK 3 L33: 0.4418 L12: 0.2582 REMARK 3 L13: 0.3255 L23: 0.1607 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: -0.0537 S13: -0.0104 REMARK 3 S21: 0.0473 S22: -0.0037 S23: -0.0133 REMARK 3 S31: 0.0020 S32: -0.0914 S33: -0.0059 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 162:173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7996 28.2144 -28.7865 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.2007 REMARK 3 T33: 0.1433 T12: -0.0568 REMARK 3 T13: -0.0015 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.5061 L22: 0.9690 REMARK 3 L33: 0.3290 L12: 0.0531 REMARK 3 L13: -0.0096 L23: -0.1477 REMARK 3 S TENSOR REMARK 3 S11: -0.2630 S12: 0.3960 S13: -0.0051 REMARK 3 S21: -0.2574 S22: 0.1265 S23: -0.3756 REMARK 3 S31: -0.1882 S32: 0.3150 S33: -0.0532 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 174:204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9781 24.8724 -14.7420 REMARK 3 T TENSOR REMARK 3 T11: 0.0912 T22: 0.1534 REMARK 3 T33: 0.1166 T12: 0.0259 REMARK 3 T13: -0.0018 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.3370 L22: 0.3843 REMARK 3 L33: 0.1910 L12: 0.2919 REMARK 3 L13: 0.3014 L23: 0.0345 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: -0.0190 S13: 0.0585 REMARK 3 S21: -0.0114 S22: 0.0102 S23: 0.0621 REMARK 3 S31: -0.1042 S32: -0.1073 S33: -0.0036 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 205:219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5222 35.3192 -17.6791 REMARK 3 T TENSOR REMARK 3 T11: 0.1715 T22: 0.1189 REMARK 3 T33: 0.1830 T12: -0.0181 REMARK 3 T13: 0.0119 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.3688 L22: 0.1151 REMARK 3 L33: 0.1946 L12: 0.0625 REMARK 3 L13: -0.1256 L23: -0.0138 REMARK 3 S TENSOR REMARK 3 S11: -0.0671 S12: 0.0598 S13: 0.1676 REMARK 3 S21: 0.1129 S22: 0.0503 S23: -0.2801 REMARK 3 S31: -0.1454 S32: 0.1427 S33: -0.0058 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 220:258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4862 24.9357 -10.6009 REMARK 3 T TENSOR REMARK 3 T11: 0.1052 T22: 0.1144 REMARK 3 T33: 0.1065 T12: 0.0058 REMARK 3 T13: -0.0021 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.1833 L22: 0.7190 REMARK 3 L33: 0.9366 L12: -0.0662 REMARK 3 L13: -0.0634 L23: 0.0437 REMARK 3 S TENSOR REMARK 3 S11: -0.0523 S12: -0.0407 S13: 0.0524 REMARK 3 S21: -0.0129 S22: 0.0497 S23: -0.0072 REMARK 3 S31: -0.0178 S32: -0.0630 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 259:296 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8914 29.5233 -10.1939 REMARK 3 T TENSOR REMARK 3 T11: 0.1216 T22: 0.0922 REMARK 3 T33: 0.1409 T12: 0.0089 REMARK 3 T13: -0.0038 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.5627 L22: 0.9493 REMARK 3 L33: 1.7871 L12: 0.0648 REMARK 3 L13: 0.4513 L23: 0.3041 REMARK 3 S TENSOR REMARK 3 S11: -0.0176 S12: 0.0090 S13: 0.0142 REMARK 3 S21: 0.0079 S22: 0.1157 S23: -0.1484 REMARK 3 S31: -0.1069 S32: 0.0361 S33: 0.0022 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6K93 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1300012524. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9198 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM V7.2.2 REMARK 200 DATA SCALING SOFTWARE : POINTLESS V1.11.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47011 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 37.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 1.06400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER V2.8.0 REMARK 200 STARTING MODEL: 4ELN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16.5% 7(V/V) PEG400, 6.5%(W/V) PEG REMARK 280 20000, 50MM KH2PO4, PH 8.0, 1 UL OF 10 MM BETA-MERCAPTOETHANOL, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.04500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.49000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.49000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.02250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.49000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.49000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 159.06750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.49000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.49000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.02250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.49000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.49000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 159.06750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 106.04500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 352 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 477 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 491 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 629 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 LEU A 3 REMARK 465 CYS A 4 REMARK 465 THR A 5 REMARK 465 SER A 6 REMARK 465 LYS A 7 REMARK 465 PRO A 8 REMARK 465 SER A 9 REMARK 465 VAL A 10 REMARK 465 VAL A 11 REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 PRO A 14 REMARK 465 VAL A 15 REMARK 465 ALA A 16 REMARK 465 GLY A 17 REMARK 465 SER A 18 REMARK 465 PRO A 19 REMARK 465 GLU A 20 REMARK 465 HIS A 21 REMARK 465 TYR A 22 REMARK 465 LEU A 23 REMARK 465 THR A 24 REMARK 465 HIS A 25 REMARK 465 THR A 26 REMARK 465 ALA A 27 REMARK 465 GLU A 28 REMARK 465 GLN A 29 REMARK 465 THR A 30 REMARK 465 THR A 31 REMARK 465 PRO A 32 REMARK 465 SER A 33 REMARK 465 THR A 34 REMARK 465 PRO A 35 REMARK 465 SER A 36 REMARK 465 SER A 37 REMARK 465 PRO A 38 REMARK 465 GLU A 39 REMARK 465 ALA A 40 REMARK 465 PRO A 41 REMARK 465 MET A 42 REMARK 465 SER A 43 REMARK 465 PRO A 44 REMARK 465 SER A 45 REMARK 465 LEU A 46 REMARK 465 HIS A 47 REMARK 465 GLY A 48 REMARK 465 LEU A 49 REMARK 465 ALA A 50 REMARK 465 ALA A 51 REMARK 465 LEU A 52 REMARK 465 GLY A 53 REMARK 465 SER A 54 REMARK 465 PRO A 55 REMARK 465 ARG A 56 REMARK 465 ALA A 57 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 120 O HOH A 307 1.24 REMARK 500 HH21 ARG A 278 O HOH A 306 1.34 REMARK 500 HH21 ARG A 273 O HOH A 302 1.56 REMARK 500 H ASN A 71 O HOH A 316 1.59 REMARK 500 HE ARG A 273 O HOH A 302 1.59 REMARK 500 OE1 GLU A 283 O HOH A 301 1.60 REMARK 500 O ALA A 296 O HOH A 302 1.63 REMARK 500 O HOH A 310 O HOH A 500 1.67 REMARK 500 O THR A 72 O HOH A 303 1.75 REMARK 500 O HOH A 316 O HOH A 581 1.86 REMARK 500 O HOH A 368 O HOH A 380 1.95 REMARK 500 O HOH A 306 O HOH A 600 2.00 REMARK 500 O HOH A 450 O HOH A 611 2.02 REMARK 500 NH1 ARG A 253 O HOH A 304 2.02 REMARK 500 O HOH A 380 O HOH A 581 2.03 REMARK 500 O HOH A 590 O HOH A 653 2.06 REMARK 500 O HOH A 633 O HOH A 645 2.07 REMARK 500 O HOH A 514 O HOH A 529 2.08 REMARK 500 NE ARG A 122 O HOH A 305 2.08 REMARK 500 NH2 ARG A 278 O HOH A 306 2.09 REMARK 500 NE2 GLN A 120 O HOH A 307 2.09 REMARK 500 O HOH A 318 O HOH A 584 2.14 REMARK 500 NH2 ARG A 278 OE2 GLU A 280 2.16 REMARK 500 O HOH A 305 O HOH A 315 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 599 O HOH A 639 6554 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 225 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 225 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 65 86.22 -156.10 REMARK 500 ASP A 74 75.44 37.48 REMARK 500 LYS A 233 67.74 -105.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 674 DISTANCE = 6.97 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ELN RELATED DB: PDB DBREF 6K93 A 1 296 UNP Q8PHM1 Q8PHM1_XANAC 1 296 SEQADV 6K93 MET A -19 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 GLY A -18 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 SER A -17 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 SER A -16 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 HIS A -15 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 HIS A -14 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 HIS A -13 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 HIS A -12 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 HIS A -11 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 HIS A -10 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 SER A -9 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 SER A -8 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 GLY A -7 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 LEU A -6 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 VAL A -5 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 PRO A -4 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 ARG A -3 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 GLY A -2 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 SER A -1 UNP Q8PHM1 EXPRESSION TAG SEQADV 6K93 HIS A 0 UNP Q8PHM1 EXPRESSION TAG SEQRES 1 A 316 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 316 LEU VAL PRO ARG GLY SER HIS MET GLY LEU CYS THR SER SEQRES 3 A 316 LYS PRO SER VAL VAL GLY SER PRO VAL ALA GLY SER PRO SEQRES 4 A 316 GLU HIS TYR LEU THR HIS THR ALA GLU GLN THR THR PRO SEQRES 5 A 316 SER THR PRO SER SER PRO GLU ALA PRO MET SER PRO SER SEQRES 6 A 316 LEU HIS GLY LEU ALA ALA LEU GLY SER PRO ARG ALA SER SEQRES 7 A 316 SER SER PRO ARG PRO LEU SER PRO LEU VAL GLU LEU ASN SEQRES 8 A 316 THR SER ASP LEU ILE LYS GLN LYS LYS GLN LEU TRP GLN SEQRES 9 A 316 ARG VAL GLN HIS ASP GLY ALA GLN PHE ARG SER THR PRO SEQRES 10 A 316 GLU GLU ARG LYS GLN PHE LYS THR ALA LEU ILE THR LEU SEQRES 11 A 316 TRP GLY GLU GLN TYR ARG PRO GLU ARG GLN GLN ARG TRP SEQRES 12 A 316 ASN GLY MET MET GLN ARG MET ALA GLN MET LYS TRP ASN SEQRES 13 A 316 HIS PRO GLU LEU LYS TYR MET ALA THR GLU ASP LEU VAL SEQRES 14 A 316 ALA LEU GLN ALA TRP THR THR ASP ASP TYR GLU VAL VAL SEQRES 15 A 316 GLN ASP VAL LEU GLU LYS GLU ALA ARG PRO THR ALA HIS SEQRES 16 A 316 GLY LEU ALA PHE ALA LYS CYS ILE ILE SER ALA LEU HIS SEQRES 17 A 316 SER LEU PRO GLU GLU TYR SER TYR GLN GLY THR VAL PHE SEQRES 18 A 316 THR GLY GLU ASP GLN LEU PRO ASP TRP VAL SER GLU ARG SEQRES 19 A 316 TYR GLN GLU ARG SER ILE THR THR ASP ARG ARG PHE PHE SEQRES 20 A 316 ALA ALA SER GLU THR LYS ASN ALA SER TRP GLN GLY MET SEQRES 21 A 316 ALA VAL GLU TRP GLU SER ASN SER THR THR GLY LYS ARG SEQRES 22 A 316 ILE SER MET PHE SER GLU ARG PRO ASN GLU GLN GLU VAL SEQRES 23 A 316 LEU PHE PRO PRO GLY THR ARG PHE GLN VAL THR ARG ILE SEQRES 24 A 316 GLU GLU ASN GLU THR HIS PRO ARG LEU LYS ILE TYR GLN SEQRES 25 A 316 SER GLN ILE ALA FORMUL 2 HOH *374(H2 O) HELIX 1 AA1 ASP A 74 GLY A 90 1 17 HELIX 2 AA2 ALA A 91 PHE A 93 5 3 HELIX 3 AA3 THR A 96 THR A 109 1 14 HELIX 4 AA4 GLY A 112 GLN A 114 5 3 HELIX 5 AA5 TYR A 115 HIS A 137 1 23 HELIX 6 AA6 PRO A 138 LYS A 141 5 4 HELIX 7 AA7 ALA A 144 THR A 155 1 12 HELIX 8 AA8 THR A 156 VAL A 162 5 7 HELIX 9 AA9 THR A 173 LEU A 190 1 18 HELIX 10 AB1 PRO A 191 SER A 195 5 5 HELIX 11 AB2 LEU A 207 TYR A 215 1 9 SHEET 1 AA1 5 GLY A 198 GLU A 204 0 SHEET 2 AA1 5 VAL A 242 SER A 248 -1 O SER A 248 N GLY A 198 SHEET 3 AA1 5 LEU A 288 ILE A 295 1 O GLN A 294 N ASN A 247 SHEET 4 AA1 5 ARG A 273 GLU A 281 -1 N GLN A 275 O SER A 293 SHEET 5 AA1 5 ILE A 220 THR A 222 -1 N THR A 221 O PHE A 274 SHEET 1 AA2 3 PHE A 227 SER A 230 0 SHEET 2 AA2 3 GLU A 265 PHE A 268 -1 O PHE A 268 N PHE A 227 SHEET 3 AA2 3 LYS A 252 ARG A 253 -1 N LYS A 252 O LEU A 267 CISPEP 1 HIS A 285 PRO A 286 0 -3.54 CRYST1 52.980 52.980 212.090 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018875 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004715 0.00000