HEADER LIGASE 21-JUN-19 6KAB TITLE CRYSTAL STRUCTURE OF PLASMODIUM LYSYL-TRNA SYNTHETASE IN COMPLEX WITH TITLE 2 A CLADOSPORIN DERIVATIVE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE--TRNA LIGASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: LYSYL-TRNA SYNTHETASE; COMPND 5 EC: 6.1.1.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM (ISOLATE NF54); SOURCE 3 ORGANISM_TAXID: 5843; SOURCE 4 STRAIN: ISOLATE NF54; SOURCE 5 GENE: PFNF54_04763; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR, COMPLEX, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR J.ZHOU,P.FANG REVDAT 3 22-NOV-23 6KAB 1 REMARK REVDAT 2 06-MAY-20 6KAB 1 JRNL REVDAT 1 08-APR-20 6KAB 0 JRNL AUTH J.ZHOU,L.ZHENG,Z.HEI,W.LI,J.WANG,B.YU,P.FANG JRNL TITL ATOMIC RESOLUTION ANALYSES OF ISOCOUMARIN DERIVATIVES FOR JRNL TITL 2 INHIBITION OF LYSYL-TRNA SYNTHETASE. JRNL REF ACS CHEM.BIOL. V. 15 1016 2020 JRNL REFN ESSN 1554-8937 JRNL PMID 32195573 JRNL DOI 10.1021/ACSCHEMBIO.0C00032 REMARK 2 REMARK 2 RESOLUTION. 2.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 48069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.1789 - 6.2253 0.92 4492 225 0.2243 0.2518 REMARK 3 2 6.2253 - 4.9430 0.98 4777 255 0.2220 0.2690 REMARK 3 3 4.9430 - 4.3187 0.89 4379 220 0.1921 0.2346 REMARK 3 4 4.3187 - 3.9241 0.95 4608 254 0.2005 0.2576 REMARK 3 5 3.9241 - 3.6430 0.97 4781 250 0.2169 0.2699 REMARK 3 6 3.6430 - 3.4282 0.97 4740 271 0.2208 0.2826 REMARK 3 7 3.4282 - 3.2566 0.96 4685 262 0.2392 0.2813 REMARK 3 8 3.2566 - 3.1149 0.88 4309 205 0.2604 0.3156 REMARK 3 9 3.1149 - 2.9950 0.94 4595 247 0.2652 0.3266 REMARK 3 10 2.9950 - 2.8916 0.88 4280 234 0.2767 0.3403 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 1.4573 13.0438 22.7589 REMARK 3 T TENSOR REMARK 3 T11: 0.1804 T22: 0.2646 REMARK 3 T33: 0.2640 T12: -0.0225 REMARK 3 T13: 0.0273 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 0.0868 L22: 0.2311 REMARK 3 L33: 0.4023 L12: -0.0024 REMARK 3 L13: 0.0735 L23: 0.1638 REMARK 3 S TENSOR REMARK 3 S11: -0.0015 S12: 0.0052 S13: -0.0065 REMARK 3 S21: -0.0058 S22: -0.0097 S23: 0.0098 REMARK 3 S31: -0.0116 S32: -0.0007 S33: 0.0143 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KAB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1300012619. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48151 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4YCV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRI-SODIUM CITRATE, PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 76 REMARK 465 GLU A 77 REMARK 465 GLY A 584 REMARK 465 GLY A 585 REMARK 465 HIS A 586 REMARK 465 HIS A 587 REMARK 465 HIS A 588 REMARK 465 HIS A 589 REMARK 465 HIS A 590 REMARK 465 HIS A 591 REMARK 465 MET B 76 REMARK 465 GLU B 77 REMARK 465 VAL B 78 REMARK 465 PRO B 442 REMARK 465 ASN B 583 REMARK 465 GLY B 584 REMARK 465 GLY B 585 REMARK 465 HIS B 586 REMARK 465 HIS B 587 REMARK 465 HIS B 588 REMARK 465 HIS B 589 REMARK 465 HIS B 590 REMARK 465 HIS B 591 REMARK 465 MET C 76 REMARK 465 GLU C 77 REMARK 465 LYS C 527 REMARK 465 GLY C 528 REMARK 465 ASP C 529 REMARK 465 THR C 530 REMARK 465 GLU C 531 REMARK 465 ALA C 532 REMARK 465 ALA C 533 REMARK 465 ASN C 583 REMARK 465 GLY C 584 REMARK 465 GLY C 585 REMARK 465 HIS C 586 REMARK 465 HIS C 587 REMARK 465 HIS C 588 REMARK 465 HIS C 589 REMARK 465 HIS C 590 REMARK 465 HIS C 591 REMARK 465 MET D 76 REMARK 465 GLU D 77 REMARK 465 GLY D 226 REMARK 465 LEU D 227 REMARK 465 LYS D 228 REMARK 465 ASP D 229 REMARK 465 ASN D 583 REMARK 465 GLY D 584 REMARK 465 GLY D 585 REMARK 465 HIS D 586 REMARK 465 HIS D 587 REMARK 465 HIS D 588 REMARK 465 HIS D 589 REMARK 465 HIS D 590 REMARK 465 HIS D 591 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 78 CG1 CG2 REMARK 470 ARG A 81 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 89 CD CE NZ REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 ILE A 99 CG1 CG2 CD1 REMARK 470 LYS A 118 CD CE NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 ASP A 121 CG OD1 OD2 REMARK 470 ARG A 141 NE CZ NH1 NH2 REMARK 470 SER A 145 OG REMARK 470 GLN A 147 CG CD OE1 NE2 REMARK 470 LYS A 160 CE NZ REMARK 470 LYS A 200 CG CD CE NZ REMARK 470 LYS A 201 CG CD CE NZ REMARK 470 GLU A 203 CG CD OE1 OE2 REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 ASP A 229 CG OD1 OD2 REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 ASN A 286 CG OD1 ND2 REMARK 470 TYR A 354 CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 382 CD CE NZ REMARK 470 ASP A 383 CG OD1 OD2 REMARK 470 GLU A 386 CG CD OE1 OE2 REMARK 470 GLN A 388 CG CD OE1 NE2 REMARK 470 ILE A 390 CG1 CG2 CD1 REMARK 470 LYS A 409 CG CD CE NZ REMARK 470 ILE A 432 CG1 CG2 CD1 REMARK 470 LYS A 433 CG CD CE NZ REMARK 470 GLU A 434 CD OE1 OE2 REMARK 470 LYS A 436 CG CD CE NZ REMARK 470 ILE A 437 CG1 CG2 CD1 REMARK 470 LEU A 439 CG CD1 CD2 REMARK 470 ASN A 441 CG OD1 ND2 REMARK 470 LYS A 447 CG CD CE NZ REMARK 470 GLU A 516 CG CD OE1 OE2 REMARK 470 PHE A 518 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 519 CG CD CE NZ REMARK 470 LEU A 520 CG CD1 CD2 REMARK 470 GLN A 521 CG CD OE1 NE2 REMARK 470 GLN A 522 CG CD OE1 NE2 REMARK 470 LYS A 523 CG CD CE NZ REMARK 470 ASP A 524 CG OD1 OD2 REMARK 470 ARG A 525 NE CZ NH1 NH2 REMARK 470 GLU A 526 CG CD OE1 OE2 REMARK 470 LYS A 527 CG CD CE NZ REMARK 470 GLU A 531 CG CD OE1 OE2 REMARK 470 GLN A 534 CD OE1 NE2 REMARK 470 LEU A 535 CG CD1 CD2 REMARK 470 ARG B 81 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 82 CG CD1 CD2 REMARK 470 LYS B 89 CD CE NZ REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 ILE B 99 CG1 CG2 CD1 REMARK 470 LYS B 118 CG CD CE NZ REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 ASP B 121 CG OD1 OD2 REMARK 470 ASN B 124 CG OD1 ND2 REMARK 470 GLU B 126 CG CD OE1 OE2 REMARK 470 ILE B 132 CG1 CG2 CD1 REMARK 470 SER B 145 OG REMARK 470 GLN B 147 CG CD OE1 NE2 REMARK 470 LYS B 148 CG CD CE NZ REMARK 470 LYS B 160 NZ REMARK 470 LYS B 198 CD CE NZ REMARK 470 LYS B 200 CG CD CE NZ REMARK 470 LYS B 201 CG CD CE NZ REMARK 470 GLU B 203 CG CD OE1 OE2 REMARK 470 LYS B 209 CD CE NZ REMARK 470 TYR B 225 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 228 CG CD CE NZ REMARK 470 ASP B 229 CG OD1 OD2 REMARK 470 THR B 230 OG1 CG2 REMARK 470 LYS B 382 CG CD CE NZ REMARK 470 GLN B 388 CG CD OE1 NE2 REMARK 470 GLU B 426 CG CD OE1 OE2 REMARK 470 LYS B 433 CG CD CE NZ REMARK 470 GLU B 434 CD OE1 OE2 REMARK 470 LYS B 436 CG CD CE NZ REMARK 470 ILE B 437 CG1 CG2 CD1 REMARK 470 GLU B 438 CG CD OE1 OE2 REMARK 470 LEU B 439 CG CD1 CD2 REMARK 470 ASN B 441 CG OD1 ND2 REMARK 470 LYS B 447 CG CD CE NZ REMARK 470 SER B 454 OG REMARK 470 HIS B 455 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 460 CG CD CE NZ REMARK 470 LYS B 515 CE NZ REMARK 470 LYS B 519 CG CD CE NZ REMARK 470 LYS B 523 CD CE NZ REMARK 470 GLU B 526 CG CD OE1 OE2 REMARK 470 LYS B 527 CG CD CE NZ REMARK 470 ASP B 529 CG OD1 OD2 REMARK 470 GLN B 534 CG CD OE1 NE2 REMARK 470 LEU B 535 CG CD1 CD2 REMARK 470 VAL C 78 CG1 CG2 REMARK 470 ARG C 81 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 82 CG CD1 CD2 REMARK 470 LYS C 89 CD CE NZ REMARK 470 LYS C 97 CD CE NZ REMARK 470 LYS C 118 CD CE NZ REMARK 470 LYS C 120 CD CE NZ REMARK 470 ASP C 121 CG OD1 OD2 REMARK 470 ASN C 124 CG OD1 ND2 REMARK 470 GLN C 147 CD OE1 NE2 REMARK 470 LYS C 200 CG CD CE NZ REMARK 470 LYS C 201 CG CD CE NZ REMARK 470 GLU C 203 CD OE1 OE2 REMARK 470 LYS C 224 CG CD CE NZ REMARK 470 TYR C 225 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 228 CG CD CE NZ REMARK 470 ASP C 229 CG OD1 OD2 REMARK 470 THR C 230 OG1 CG2 REMARK 470 GLU C 245 CG CD OE1 OE2 REMARK 470 ASN C 286 CG OD1 ND2 REMARK 470 LYS C 409 CG CD CE NZ REMARK 470 VAL C 410 CG1 CG2 REMARK 470 ILE C 414 CG1 CG2 CD1 REMARK 470 GLU C 416 CG CD OE1 OE2 REMARK 470 GLU C 423 CG CD OE1 OE2 REMARK 470 LYS C 427 CG CD CE NZ REMARK 470 ASN C 430 CG OD1 ND2 REMARK 470 ILE C 431 CG1 CG2 CD1 REMARK 470 LYS C 433 CG CD CE NZ REMARK 470 GLU C 434 CG CD OE1 OE2 REMARK 470 LYS C 436 CG CD CE NZ REMARK 470 ASN C 441 CG OD1 ND2 REMARK 470 LYS C 460 CG CD CE NZ REMARK 470 PHE C 512 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE C 518 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS C 519 CG CD CE NZ REMARK 470 GLN C 521 CG CD OE1 NE2 REMARK 470 GLN C 522 CG CD OE1 NE2 REMARK 470 LYS C 523 CG CD CE NZ REMARK 470 ASP C 524 CG OD1 OD2 REMARK 470 ARG C 525 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 526 CG CD OE1 OE2 REMARK 470 GLN C 534 CG CD OE1 NE2 REMARK 470 LEU C 535 CG CD1 CD2 REMARK 470 SER C 537 OG REMARK 470 VAL D 78 CG1 CG2 REMARK 470 ASP D 79 CG OD1 OD2 REMARK 470 ARG D 81 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 82 CG CD1 CD2 REMARK 470 GLU D 85 CG CD OE1 OE2 REMARK 470 LYS D 89 CG CD CE NZ REMARK 470 GLU D 117 CD OE1 OE2 REMARK 470 LYS D 118 CD CE NZ REMARK 470 ASP D 130 CG OD1 OD2 REMARK 470 ARG D 141 NE CZ NH1 NH2 REMARK 470 LYS D 200 CG CD CE NZ REMARK 470 MET D 223 CG SD CE REMARK 470 LYS D 224 CG CD CE NZ REMARK 470 TYR D 225 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU D 231 CG CD OE1 OE2 REMARK 470 ARG D 233 CD NE CZ NH1 NH2 REMARK 470 ILE D 281 CG1 CG2 CD1 REMARK 470 ASN D 286 CG OD1 ND2 REMARK 470 LYS D 382 CG CD CE NZ REMARK 470 GLU D 386 CG CD OE1 OE2 REMARK 470 GLN D 388 CG CD OE1 NE2 REMARK 470 LYS D 409 CG CD CE NZ REMARK 470 ASN D 412 CG OD1 ND2 REMARK 470 GLU D 426 CG CD OE1 OE2 REMARK 470 LYS D 433 CG CD CE NZ REMARK 470 GLU D 434 CG CD OE1 OE2 REMARK 470 LYS D 436 CG CD CE NZ REMARK 470 ILE D 437 CG1 CG2 CD1 REMARK 470 GLU D 438 CG CD OE1 OE2 REMARK 470 LEU D 439 CG CD1 CD2 REMARK 470 ASN D 441 CG OD1 ND2 REMARK 470 LYS D 447 CG CD CE NZ REMARK 470 LYS D 515 CG CD CE NZ REMARK 470 GLU D 516 CG CD OE1 OE2 REMARK 470 LYS D 519 CG CD CE NZ REMARK 470 LEU D 520 CG CD1 CD2 REMARK 470 GLN D 521 CG CD OE1 NE2 REMARK 470 GLN D 522 CG CD OE1 NE2 REMARK 470 LYS D 523 CG CD CE NZ REMARK 470 ARG D 525 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 526 CG CD OE1 OE2 REMARK 470 LYS D 527 CG CD CE NZ REMARK 470 GLN D 534 CG CD OE1 NE2 REMARK 470 SER D 537 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 97 50.06 -91.62 REMARK 500 GLU A 129 3.40 -61.56 REMARK 500 GLU A 490 58.33 -97.18 REMARK 500 GLN B 236 76.28 -101.84 REMARK 500 GLU C 416 70.79 59.47 REMARK 500 GLU C 490 59.03 -90.89 REMARK 500 ASN D 412 -8.88 73.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D4U A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LYS A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D4U B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LYS B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D4U C 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LYS C 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D4U D 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LYS D 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6KA6 RELATED DB: PDB DBREF 6KAB A 77 583 UNP W7JP72 W7JP72_PLAFO 15 521 DBREF 6KAB B 77 583 UNP W7JP72 W7JP72_PLAFO 15 521 DBREF 6KAB C 77 583 UNP W7JP72 W7JP72_PLAFO 15 521 DBREF 6KAB D 77 583 UNP W7JP72 W7JP72_PLAFO 15 521 SEQADV 6KAB MET A 76 UNP W7JP72 INITIATING METHIONINE SEQADV 6KAB GLY A 584 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB GLY A 585 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS A 586 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS A 587 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS A 588 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS A 589 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS A 590 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS A 591 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB MET B 76 UNP W7JP72 INITIATING METHIONINE SEQADV 6KAB GLY B 584 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB GLY B 585 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS B 586 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS B 587 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS B 588 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS B 589 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS B 590 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS B 591 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB MET C 76 UNP W7JP72 INITIATING METHIONINE SEQADV 6KAB GLY C 584 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB GLY C 585 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS C 586 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS C 587 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS C 588 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS C 589 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS C 590 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS C 591 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB MET D 76 UNP W7JP72 INITIATING METHIONINE SEQADV 6KAB GLY D 584 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB GLY D 585 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS D 586 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS D 587 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS D 588 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS D 589 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS D 590 UNP W7JP72 EXPRESSION TAG SEQADV 6KAB HIS D 591 UNP W7JP72 EXPRESSION TAG SEQRES 1 A 516 MET GLU VAL ASP PRO ARG LEU TYR PHE GLU ASN ARG SER SEQRES 2 A 516 LYS PHE ILE GLN ASP GLN LYS ASP LYS GLY ILE ASN PRO SEQRES 3 A 516 TYR PRO HIS LYS PHE GLU ARG THR ILE SER ILE PRO GLU SEQRES 4 A 516 PHE ILE GLU LYS TYR LYS ASP LEU GLY ASN GLY GLU HIS SEQRES 5 A 516 LEU GLU ASP THR ILE LEU ASN ILE THR GLY ARG ILE MET SEQRES 6 A 516 ARG VAL SER ALA SER GLY GLN LYS LEU ARG PHE PHE ASP SEQRES 7 A 516 LEU VAL GLY ASP GLY GLU LYS ILE GLN VAL LEU ALA ASN SEQRES 8 A 516 TYR SER PHE HIS ASN HIS GLU LYS GLY ASN PHE ALA GLU SEQRES 9 A 516 CYS TYR ASP LYS ILE ARG ARG GLY ASP ILE VAL GLY ILE SEQRES 10 A 516 VAL GLY PHE PRO GLY LYS SER LYS LYS GLY GLU LEU SER SEQRES 11 A 516 ILE PHE PRO LYS GLU THR ILE LEU LEU SER ALA CYS LEU SEQRES 12 A 516 HIS MET LEU PRO MET LYS TYR GLY LEU LYS ASP THR GLU SEQRES 13 A 516 ILE ARG TYR ARG GLN ARG TYR LEU ASP LEU LEU ILE ASN SEQRES 14 A 516 GLU SER SER ARG HIS THR PHE VAL THR ARG THR LYS ILE SEQRES 15 A 516 ILE ASN PHE LEU ARG ASN PHE LEU ASN GLU ARG GLY PHE SEQRES 16 A 516 PHE GLU VAL GLU THR PRO MET MET ASN LEU ILE ALA GLY SEQRES 17 A 516 GLY ALA ASN ALA ARG PRO PHE ILE THR HIS HIS ASN ASP SEQRES 18 A 516 LEU ASP LEU ASP LEU TYR LEU ARG ILE ALA THR GLU LEU SEQRES 19 A 516 PRO LEU LYS MET LEU ILE VAL GLY GLY ILE ASP LYS VAL SEQRES 20 A 516 TYR GLU ILE GLY LYS VAL PHE ARG ASN GLU GLY ILE ASP SEQRES 21 A 516 ASN THR HIS ASN PRO GLU PHE THR SER CYS GLU PHE TYR SEQRES 22 A 516 TRP ALA TYR ALA ASP TYR ASN ASP LEU ILE LYS TRP SER SEQRES 23 A 516 GLU ASP PHE PHE SER GLN LEU VAL TYR HIS LEU PHE GLY SEQRES 24 A 516 THR TYR LYS ILE SER TYR ASN LYS ASP GLY PRO GLU ASN SEQRES 25 A 516 GLN PRO ILE GLU ILE ASP PHE THR PRO PRO TYR PRO LYS SEQRES 26 A 516 VAL SER ILE VAL GLU GLU ILE GLU LYS VAL THR ASN THR SEQRES 27 A 516 ILE LEU GLU GLN PRO PHE ASP SER ASN GLU THR ILE GLU SEQRES 28 A 516 LYS MET ILE ASN ILE ILE LYS GLU HIS LYS ILE GLU LEU SEQRES 29 A 516 PRO ASN PRO PRO THR ALA ALA LYS LEU LEU ASP GLN LEU SEQRES 30 A 516 ALA SER HIS PHE ILE GLU ASN LYS TYR ASN ASP LYS PRO SEQRES 31 A 516 PHE PHE ILE VAL GLU HIS PRO GLN ILE MET SER PRO LEU SEQRES 32 A 516 ALA LYS TYR HIS ARG THR LYS PRO GLY LEU THR GLU ARG SEQRES 33 A 516 LEU GLU MET PHE ILE CYS GLY LYS GLU VAL LEU ASN ALA SEQRES 34 A 516 TYR THR GLU LEU ASN ASP PRO PHE LYS GLN LYS GLU CYS SEQRES 35 A 516 PHE LYS LEU GLN GLN LYS ASP ARG GLU LYS GLY ASP THR SEQRES 36 A 516 GLU ALA ALA GLN LEU ASP SER ALA PHE CYS THR SER LEU SEQRES 37 A 516 GLU TYR GLY LEU PRO PRO THR GLY GLY LEU GLY LEU GLY SEQRES 38 A 516 ILE ASP ARG ILE THR MET PHE LEU THR ASN LYS ASN SER SEQRES 39 A 516 ILE LYS ASP VAL ILE LEU PHE PRO THR MET ARG PRO ALA SEQRES 40 A 516 ASN GLY GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 516 MET GLU VAL ASP PRO ARG LEU TYR PHE GLU ASN ARG SER SEQRES 2 B 516 LYS PHE ILE GLN ASP GLN LYS ASP LYS GLY ILE ASN PRO SEQRES 3 B 516 TYR PRO HIS LYS PHE GLU ARG THR ILE SER ILE PRO GLU SEQRES 4 B 516 PHE ILE GLU LYS TYR LYS ASP LEU GLY ASN GLY GLU HIS SEQRES 5 B 516 LEU GLU ASP THR ILE LEU ASN ILE THR GLY ARG ILE MET SEQRES 6 B 516 ARG VAL SER ALA SER GLY GLN LYS LEU ARG PHE PHE ASP SEQRES 7 B 516 LEU VAL GLY ASP GLY GLU LYS ILE GLN VAL LEU ALA ASN SEQRES 8 B 516 TYR SER PHE HIS ASN HIS GLU LYS GLY ASN PHE ALA GLU SEQRES 9 B 516 CYS TYR ASP LYS ILE ARG ARG GLY ASP ILE VAL GLY ILE SEQRES 10 B 516 VAL GLY PHE PRO GLY LYS SER LYS LYS GLY GLU LEU SER SEQRES 11 B 516 ILE PHE PRO LYS GLU THR ILE LEU LEU SER ALA CYS LEU SEQRES 12 B 516 HIS MET LEU PRO MET LYS TYR GLY LEU LYS ASP THR GLU SEQRES 13 B 516 ILE ARG TYR ARG GLN ARG TYR LEU ASP LEU LEU ILE ASN SEQRES 14 B 516 GLU SER SER ARG HIS THR PHE VAL THR ARG THR LYS ILE SEQRES 15 B 516 ILE ASN PHE LEU ARG ASN PHE LEU ASN GLU ARG GLY PHE SEQRES 16 B 516 PHE GLU VAL GLU THR PRO MET MET ASN LEU ILE ALA GLY SEQRES 17 B 516 GLY ALA ASN ALA ARG PRO PHE ILE THR HIS HIS ASN ASP SEQRES 18 B 516 LEU ASP LEU ASP LEU TYR LEU ARG ILE ALA THR GLU LEU SEQRES 19 B 516 PRO LEU LYS MET LEU ILE VAL GLY GLY ILE ASP LYS VAL SEQRES 20 B 516 TYR GLU ILE GLY LYS VAL PHE ARG ASN GLU GLY ILE ASP SEQRES 21 B 516 ASN THR HIS ASN PRO GLU PHE THR SER CYS GLU PHE TYR SEQRES 22 B 516 TRP ALA TYR ALA ASP TYR ASN ASP LEU ILE LYS TRP SER SEQRES 23 B 516 GLU ASP PHE PHE SER GLN LEU VAL TYR HIS LEU PHE GLY SEQRES 24 B 516 THR TYR LYS ILE SER TYR ASN LYS ASP GLY PRO GLU ASN SEQRES 25 B 516 GLN PRO ILE GLU ILE ASP PHE THR PRO PRO TYR PRO LYS SEQRES 26 B 516 VAL SER ILE VAL GLU GLU ILE GLU LYS VAL THR ASN THR SEQRES 27 B 516 ILE LEU GLU GLN PRO PHE ASP SER ASN GLU THR ILE GLU SEQRES 28 B 516 LYS MET ILE ASN ILE ILE LYS GLU HIS LYS ILE GLU LEU SEQRES 29 B 516 PRO ASN PRO PRO THR ALA ALA LYS LEU LEU ASP GLN LEU SEQRES 30 B 516 ALA SER HIS PHE ILE GLU ASN LYS TYR ASN ASP LYS PRO SEQRES 31 B 516 PHE PHE ILE VAL GLU HIS PRO GLN ILE MET SER PRO LEU SEQRES 32 B 516 ALA LYS TYR HIS ARG THR LYS PRO GLY LEU THR GLU ARG SEQRES 33 B 516 LEU GLU MET PHE ILE CYS GLY LYS GLU VAL LEU ASN ALA SEQRES 34 B 516 TYR THR GLU LEU ASN ASP PRO PHE LYS GLN LYS GLU CYS SEQRES 35 B 516 PHE LYS LEU GLN GLN LYS ASP ARG GLU LYS GLY ASP THR SEQRES 36 B 516 GLU ALA ALA GLN LEU ASP SER ALA PHE CYS THR SER LEU SEQRES 37 B 516 GLU TYR GLY LEU PRO PRO THR GLY GLY LEU GLY LEU GLY SEQRES 38 B 516 ILE ASP ARG ILE THR MET PHE LEU THR ASN LYS ASN SER SEQRES 39 B 516 ILE LYS ASP VAL ILE LEU PHE PRO THR MET ARG PRO ALA SEQRES 40 B 516 ASN GLY GLY HIS HIS HIS HIS HIS HIS SEQRES 1 C 516 MET GLU VAL ASP PRO ARG LEU TYR PHE GLU ASN ARG SER SEQRES 2 C 516 LYS PHE ILE GLN ASP GLN LYS ASP LYS GLY ILE ASN PRO SEQRES 3 C 516 TYR PRO HIS LYS PHE GLU ARG THR ILE SER ILE PRO GLU SEQRES 4 C 516 PHE ILE GLU LYS TYR LYS ASP LEU GLY ASN GLY GLU HIS SEQRES 5 C 516 LEU GLU ASP THR ILE LEU ASN ILE THR GLY ARG ILE MET SEQRES 6 C 516 ARG VAL SER ALA SER GLY GLN LYS LEU ARG PHE PHE ASP SEQRES 7 C 516 LEU VAL GLY ASP GLY GLU LYS ILE GLN VAL LEU ALA ASN SEQRES 8 C 516 TYR SER PHE HIS ASN HIS GLU LYS GLY ASN PHE ALA GLU SEQRES 9 C 516 CYS TYR ASP LYS ILE ARG ARG GLY ASP ILE VAL GLY ILE SEQRES 10 C 516 VAL GLY PHE PRO GLY LYS SER LYS LYS GLY GLU LEU SER SEQRES 11 C 516 ILE PHE PRO LYS GLU THR ILE LEU LEU SER ALA CYS LEU SEQRES 12 C 516 HIS MET LEU PRO MET LYS TYR GLY LEU LYS ASP THR GLU SEQRES 13 C 516 ILE ARG TYR ARG GLN ARG TYR LEU ASP LEU LEU ILE ASN SEQRES 14 C 516 GLU SER SER ARG HIS THR PHE VAL THR ARG THR LYS ILE SEQRES 15 C 516 ILE ASN PHE LEU ARG ASN PHE LEU ASN GLU ARG GLY PHE SEQRES 16 C 516 PHE GLU VAL GLU THR PRO MET MET ASN LEU ILE ALA GLY SEQRES 17 C 516 GLY ALA ASN ALA ARG PRO PHE ILE THR HIS HIS ASN ASP SEQRES 18 C 516 LEU ASP LEU ASP LEU TYR LEU ARG ILE ALA THR GLU LEU SEQRES 19 C 516 PRO LEU LYS MET LEU ILE VAL GLY GLY ILE ASP LYS VAL SEQRES 20 C 516 TYR GLU ILE GLY LYS VAL PHE ARG ASN GLU GLY ILE ASP SEQRES 21 C 516 ASN THR HIS ASN PRO GLU PHE THR SER CYS GLU PHE TYR SEQRES 22 C 516 TRP ALA TYR ALA ASP TYR ASN ASP LEU ILE LYS TRP SER SEQRES 23 C 516 GLU ASP PHE PHE SER GLN LEU VAL TYR HIS LEU PHE GLY SEQRES 24 C 516 THR TYR LYS ILE SER TYR ASN LYS ASP GLY PRO GLU ASN SEQRES 25 C 516 GLN PRO ILE GLU ILE ASP PHE THR PRO PRO TYR PRO LYS SEQRES 26 C 516 VAL SER ILE VAL GLU GLU ILE GLU LYS VAL THR ASN THR SEQRES 27 C 516 ILE LEU GLU GLN PRO PHE ASP SER ASN GLU THR ILE GLU SEQRES 28 C 516 LYS MET ILE ASN ILE ILE LYS GLU HIS LYS ILE GLU LEU SEQRES 29 C 516 PRO ASN PRO PRO THR ALA ALA LYS LEU LEU ASP GLN LEU SEQRES 30 C 516 ALA SER HIS PHE ILE GLU ASN LYS TYR ASN ASP LYS PRO SEQRES 31 C 516 PHE PHE ILE VAL GLU HIS PRO GLN ILE MET SER PRO LEU SEQRES 32 C 516 ALA LYS TYR HIS ARG THR LYS PRO GLY LEU THR GLU ARG SEQRES 33 C 516 LEU GLU MET PHE ILE CYS GLY LYS GLU VAL LEU ASN ALA SEQRES 34 C 516 TYR THR GLU LEU ASN ASP PRO PHE LYS GLN LYS GLU CYS SEQRES 35 C 516 PHE LYS LEU GLN GLN LYS ASP ARG GLU LYS GLY ASP THR SEQRES 36 C 516 GLU ALA ALA GLN LEU ASP SER ALA PHE CYS THR SER LEU SEQRES 37 C 516 GLU TYR GLY LEU PRO PRO THR GLY GLY LEU GLY LEU GLY SEQRES 38 C 516 ILE ASP ARG ILE THR MET PHE LEU THR ASN LYS ASN SER SEQRES 39 C 516 ILE LYS ASP VAL ILE LEU PHE PRO THR MET ARG PRO ALA SEQRES 40 C 516 ASN GLY GLY HIS HIS HIS HIS HIS HIS SEQRES 1 D 516 MET GLU VAL ASP PRO ARG LEU TYR PHE GLU ASN ARG SER SEQRES 2 D 516 LYS PHE ILE GLN ASP GLN LYS ASP LYS GLY ILE ASN PRO SEQRES 3 D 516 TYR PRO HIS LYS PHE GLU ARG THR ILE SER ILE PRO GLU SEQRES 4 D 516 PHE ILE GLU LYS TYR LYS ASP LEU GLY ASN GLY GLU HIS SEQRES 5 D 516 LEU GLU ASP THR ILE LEU ASN ILE THR GLY ARG ILE MET SEQRES 6 D 516 ARG VAL SER ALA SER GLY GLN LYS LEU ARG PHE PHE ASP SEQRES 7 D 516 LEU VAL GLY ASP GLY GLU LYS ILE GLN VAL LEU ALA ASN SEQRES 8 D 516 TYR SER PHE HIS ASN HIS GLU LYS GLY ASN PHE ALA GLU SEQRES 9 D 516 CYS TYR ASP LYS ILE ARG ARG GLY ASP ILE VAL GLY ILE SEQRES 10 D 516 VAL GLY PHE PRO GLY LYS SER LYS LYS GLY GLU LEU SER SEQRES 11 D 516 ILE PHE PRO LYS GLU THR ILE LEU LEU SER ALA CYS LEU SEQRES 12 D 516 HIS MET LEU PRO MET LYS TYR GLY LEU LYS ASP THR GLU SEQRES 13 D 516 ILE ARG TYR ARG GLN ARG TYR LEU ASP LEU LEU ILE ASN SEQRES 14 D 516 GLU SER SER ARG HIS THR PHE VAL THR ARG THR LYS ILE SEQRES 15 D 516 ILE ASN PHE LEU ARG ASN PHE LEU ASN GLU ARG GLY PHE SEQRES 16 D 516 PHE GLU VAL GLU THR PRO MET MET ASN LEU ILE ALA GLY SEQRES 17 D 516 GLY ALA ASN ALA ARG PRO PHE ILE THR HIS HIS ASN ASP SEQRES 18 D 516 LEU ASP LEU ASP LEU TYR LEU ARG ILE ALA THR GLU LEU SEQRES 19 D 516 PRO LEU LYS MET LEU ILE VAL GLY GLY ILE ASP LYS VAL SEQRES 20 D 516 TYR GLU ILE GLY LYS VAL PHE ARG ASN GLU GLY ILE ASP SEQRES 21 D 516 ASN THR HIS ASN PRO GLU PHE THR SER CYS GLU PHE TYR SEQRES 22 D 516 TRP ALA TYR ALA ASP TYR ASN ASP LEU ILE LYS TRP SER SEQRES 23 D 516 GLU ASP PHE PHE SER GLN LEU VAL TYR HIS LEU PHE GLY SEQRES 24 D 516 THR TYR LYS ILE SER TYR ASN LYS ASP GLY PRO GLU ASN SEQRES 25 D 516 GLN PRO ILE GLU ILE ASP PHE THR PRO PRO TYR PRO LYS SEQRES 26 D 516 VAL SER ILE VAL GLU GLU ILE GLU LYS VAL THR ASN THR SEQRES 27 D 516 ILE LEU GLU GLN PRO PHE ASP SER ASN GLU THR ILE GLU SEQRES 28 D 516 LYS MET ILE ASN ILE ILE LYS GLU HIS LYS ILE GLU LEU SEQRES 29 D 516 PRO ASN PRO PRO THR ALA ALA LYS LEU LEU ASP GLN LEU SEQRES 30 D 516 ALA SER HIS PHE ILE GLU ASN LYS TYR ASN ASP LYS PRO SEQRES 31 D 516 PHE PHE ILE VAL GLU HIS PRO GLN ILE MET SER PRO LEU SEQRES 32 D 516 ALA LYS TYR HIS ARG THR LYS PRO GLY LEU THR GLU ARG SEQRES 33 D 516 LEU GLU MET PHE ILE CYS GLY LYS GLU VAL LEU ASN ALA SEQRES 34 D 516 TYR THR GLU LEU ASN ASP PRO PHE LYS GLN LYS GLU CYS SEQRES 35 D 516 PHE LYS LEU GLN GLN LYS ASP ARG GLU LYS GLY ASP THR SEQRES 36 D 516 GLU ALA ALA GLN LEU ASP SER ALA PHE CYS THR SER LEU SEQRES 37 D 516 GLU TYR GLY LEU PRO PRO THR GLY GLY LEU GLY LEU GLY SEQRES 38 D 516 ILE ASP ARG ILE THR MET PHE LEU THR ASN LYS ASN SER SEQRES 39 D 516 ILE LYS ASP VAL ILE LEU PHE PRO THR MET ARG PRO ALA SEQRES 40 D 516 ASN GLY GLY HIS HIS HIS HIS HIS HIS HET D4U A 601 20 HET LYS A 602 10 HET D4U B 601 20 HET LYS B 602 10 HET D4U C 601 20 HET LYS C 602 10 HET D4U D 601 20 HET LYS D 602 10 HETNAM D4U (3~{S})-3-(CYCLOHEXYLMETHYL)-6,8-BIS(OXIDANYL)-3,4- HETNAM 2 D4U DIHYDROISOCHROMEN-1-ONE HETNAM LYS LYSINE FORMUL 5 D4U 4(C16 H20 O4) FORMUL 6 LYS 4(C6 H15 N2 O2 1+) FORMUL 13 HOH *412(H2 O) HELIX 1 AA1 ASP A 79 LYS A 97 1 19 HELIX 2 AA2 SER A 111 LYS A 120 1 10 HELIX 3 AA3 SER A 168 HIS A 170 5 3 HELIX 4 AA4 ASN A 176 ASP A 182 1 7 HELIX 5 AA5 MET A 223 LYS A 228 1 6 HELIX 6 AA6 GLU A 231 GLN A 236 1 6 HELIX 7 AA7 GLN A 236 ASN A 244 1 9 HELIX 8 AA8 ASN A 244 GLU A 267 1 24 HELIX 9 AA9 THR A 307 GLY A 317 1 11 HELIX 10 AB1 ASP A 353 GLY A 374 1 22 HELIX 11 AB2 ILE A 403 ASN A 412 1 10 HELIX 12 AB3 SER A 421 HIS A 435 1 15 HELIX 13 AB4 THR A 444 ILE A 457 1 14 HELIX 14 AB5 ASP A 510 GLU A 526 1 17 HELIX 15 AB6 ASP A 536 GLU A 544 1 9 HELIX 16 AB7 ILE A 557 THR A 565 1 9 HELIX 17 AB8 SER A 569 VAL A 573 5 5 HELIX 18 AB9 PRO B 80 GLY B 98 1 19 HELIX 19 AC1 SER B 111 LYS B 120 1 10 HELIX 20 AC2 ASN B 176 LYS B 183 1 8 HELIX 21 AC3 MET B 223 LYS B 228 5 6 HELIX 22 AC4 GLU B 231 GLN B 236 1 6 HELIX 23 AC5 GLN B 236 ASN B 244 1 9 HELIX 24 AC6 ASN B 244 ARG B 268 1 25 HELIX 25 AC7 THR B 307 GLY B 317 1 11 HELIX 26 AC8 ASP B 353 GLY B 374 1 22 HELIX 27 AC9 ILE B 403 ASN B 412 1 10 HELIX 28 AD1 SER B 421 HIS B 435 1 15 HELIX 29 AD2 THR B 444 ILE B 457 1 14 HELIX 30 AD3 ASP B 510 LYS B 527 1 18 HELIX 31 AD4 ASP B 536 TYR B 545 1 10 HELIX 32 AD5 ILE B 557 THR B 565 1 9 HELIX 33 AD6 SER B 569 ILE B 574 5 6 HELIX 34 AD7 ASP C 79 LYS C 97 1 19 HELIX 35 AD8 SER C 111 LYS C 120 1 10 HELIX 36 AD9 ASN C 171 GLY C 175 5 5 HELIX 37 AE1 ASN C 176 ASP C 182 1 7 HELIX 38 AE2 GLU C 231 GLN C 236 1 6 HELIX 39 AE3 GLN C 236 ASN C 244 1 9 HELIX 40 AE4 ASN C 244 GLU C 267 1 24 HELIX 41 AE5 THR C 307 GLY C 317 1 11 HELIX 42 AE6 ASP C 353 GLY C 374 1 22 HELIX 43 AE7 ILE C 403 ASN C 412 1 10 HELIX 44 AE8 SER C 421 HIS C 435 1 15 HELIX 45 AE9 THR C 444 ILE C 457 1 14 HELIX 46 AF1 PRO C 472 SER C 476 5 5 HELIX 47 AF2 ASP C 510 LYS C 523 1 14 HELIX 48 AF3 ASP C 536 GLU C 544 1 9 HELIX 49 AF4 ILE C 557 THR C 565 1 9 HELIX 50 AF5 SER C 569 VAL C 573 5 5 HELIX 51 AF6 ASP D 79 LYS D 97 1 19 HELIX 52 AF7 SER D 111 LYS D 120 1 10 HELIX 53 AF8 SER D 168 HIS D 170 5 3 HELIX 54 AF9 ASN D 176 LYS D 183 1 8 HELIX 55 AG1 GLU D 231 GLN D 236 1 6 HELIX 56 AG2 GLN D 236 ASN D 244 1 9 HELIX 57 AG3 ASN D 244 GLU D 267 1 24 HELIX 58 AG4 THR D 307 GLY D 317 1 11 HELIX 59 AG5 ASP D 353 GLY D 374 1 22 HELIX 60 AG6 ILE D 403 ASN D 412 1 10 HELIX 61 AG7 SER D 421 HIS D 435 1 15 HELIX 62 AG8 THR D 444 ILE D 457 1 14 HELIX 63 AG9 ASP D 510 GLU D 526 1 17 HELIX 64 AH1 ASP D 536 TYR D 545 1 10 HELIX 65 AH2 ILE D 557 THR D 565 1 9 HELIX 66 AH3 SER D 569 ILE D 574 5 6 SHEET 1 AA1 6 LEU A 133 ALA A 144 0 SHEET 2 AA1 6 LEU A 149 GLY A 156 -1 O PHE A 151 N SER A 143 SHEET 3 AA1 6 GLU A 159 ASN A 166 -1 O ILE A 161 N LEU A 154 SHEET 4 AA1 6 LEU A 204 SER A 215 1 O ILE A 206 N LEU A 164 SHEET 5 AA1 6 ILE A 189 LYS A 198 -1 N VAL A 193 O LYS A 209 SHEET 6 AA1 6 LEU A 133 ALA A 144 -1 N LEU A 133 O GLY A 194 SHEET 1 AA2 8 PHE A 271 GLU A 272 0 SHEET 2 AA2 8 LYS A 321 PHE A 329 1 O TYR A 323 N PHE A 271 SHEET 3 AA2 8 GLU A 341 ALA A 350 -1 O TYR A 348 N VAL A 322 SHEET 4 AA2 8 THR A 550 GLY A 556 -1 O LEU A 555 N CYS A 345 SHEET 5 AA2 8 LYS A 499 THR A 506 -1 N ASN A 503 O GLY A 554 SHEET 6 AA2 8 ARG A 491 ILE A 496 -1 N LEU A 492 O ALA A 504 SHEET 7 AA2 8 PHE A 466 VAL A 469 -1 N ILE A 468 O GLU A 493 SHEET 8 AA2 8 LYS A 400 SER A 402 1 N VAL A 401 O PHE A 467 SHEET 1 AA3 3 MET A 278 ASN A 279 0 SHEET 2 AA3 3 LEU A 299 LEU A 303 -1 O TYR A 302 N ASN A 279 SHEET 3 AA3 3 ILE A 291 HIS A 294 -1 N THR A 292 O LEU A 301 SHEET 1 AA4 2 LYS A 377 TYR A 380 0 SHEET 2 AA4 2 ILE A 390 ASP A 393 -1 O ILE A 392 N ILE A 378 SHEET 1 AA5 6 LEU B 133 SER B 145 0 SHEET 2 AA5 6 LEU B 149 GLY B 156 -1 O PHE B 151 N SER B 143 SHEET 3 AA5 6 GLU B 159 ASN B 166 -1 O GLU B 159 N GLY B 156 SHEET 4 AA5 6 LEU B 204 SER B 215 1 O LEU B 204 N GLN B 162 SHEET 5 AA5 6 ILE B 189 LYS B 198 -1 N ILE B 189 O SER B 215 SHEET 6 AA5 6 LEU B 133 SER B 145 -1 N LEU B 133 O GLY B 194 SHEET 1 AA6 8 PHE B 271 GLU B 272 0 SHEET 2 AA6 8 LYS B 321 PHE B 329 1 O LYS B 321 N PHE B 271 SHEET 3 AA6 8 GLU B 341 ALA B 350 -1 O TYR B 348 N VAL B 322 SHEET 4 AA6 8 THR B 550 GLY B 556 -1 O LEU B 555 N CYS B 345 SHEET 5 AA6 8 LYS B 499 THR B 506 -1 N ASN B 503 O GLY B 554 SHEET 6 AA6 8 ARG B 491 ILE B 496 -1 N LEU B 492 O ALA B 504 SHEET 7 AA6 8 PHE B 466 VAL B 469 -1 N ILE B 468 O GLU B 493 SHEET 8 AA6 8 LYS B 400 SER B 402 1 N VAL B 401 O VAL B 469 SHEET 1 AA7 3 MET B 278 ASN B 279 0 SHEET 2 AA7 3 LEU B 299 LEU B 303 -1 O TYR B 302 N ASN B 279 SHEET 3 AA7 3 ILE B 291 HIS B 294 -1 N THR B 292 O LEU B 301 SHEET 1 AA8 2 LYS B 377 TYR B 380 0 SHEET 2 AA8 2 ILE B 390 ASP B 393 -1 O ILE B 392 N ILE B 378 SHEET 1 AA9 6 LEU C 133 ALA C 144 0 SHEET 2 AA9 6 LEU C 149 GLY C 156 -1 O ASP C 153 N MET C 140 SHEET 3 AA9 6 GLU C 159 ASN C 166 -1 O ILE C 161 N LEU C 154 SHEET 4 AA9 6 LEU C 204 SER C 215 1 O ILE C 206 N LEU C 164 SHEET 5 AA9 6 ILE C 189 LYS C 198 -1 N ILE C 189 O SER C 215 SHEET 6 AA9 6 LEU C 133 ALA C 144 -1 N ILE C 135 O ILE C 192 SHEET 1 AB1 8 PHE C 271 GLU C 272 0 SHEET 2 AB1 8 LYS C 321 PHE C 329 1 O LYS C 321 N PHE C 271 SHEET 3 AB1 8 GLU C 341 ALA C 350 -1 O TYR C 348 N VAL C 322 SHEET 4 AB1 8 THR C 550 GLY C 556 -1 O LEU C 555 N CYS C 345 SHEET 5 AB1 8 LYS C 499 THR C 506 -1 N ASN C 503 O GLY C 554 SHEET 6 AB1 8 ARG C 491 ILE C 496 -1 N LEU C 492 O ALA C 504 SHEET 7 AB1 8 PHE C 466 VAL C 469 -1 N ILE C 468 O GLU C 493 SHEET 8 AB1 8 LYS C 400 SER C 402 1 N VAL C 401 O PHE C 467 SHEET 1 AB2 3 MET C 278 ASN C 279 0 SHEET 2 AB2 3 LEU C 299 LEU C 303 -1 O TYR C 302 N ASN C 279 SHEET 3 AB2 3 ILE C 291 HIS C 294 -1 N HIS C 294 O LEU C 299 SHEET 1 AB3 2 LYS C 377 TYR C 380 0 SHEET 2 AB3 2 ILE C 390 ASP C 393 -1 O ILE C 390 N TYR C 380 SHEET 1 AB4 6 LEU D 133 SER D 145 0 SHEET 2 AB4 6 LEU D 149 GLY D 156 -1 O PHE D 151 N SER D 143 SHEET 3 AB4 6 GLU D 159 ASN D 166 -1 O VAL D 163 N PHE D 152 SHEET 4 AB4 6 LEU D 204 SER D 215 1 O ILE D 206 N GLN D 162 SHEET 5 AB4 6 ILE D 189 LYS D 198 -1 N VAL D 193 O LYS D 209 SHEET 6 AB4 6 LEU D 133 SER D 145 -1 N ILE D 135 O ILE D 192 SHEET 1 AB5 8 PHE D 271 GLU D 272 0 SHEET 2 AB5 8 LYS D 321 PHE D 329 1 O LYS D 321 N PHE D 271 SHEET 3 AB5 8 GLU D 341 ALA D 350 -1 O TYR D 348 N VAL D 322 SHEET 4 AB5 8 THR D 550 GLY D 556 -1 O LEU D 553 N PHE D 347 SHEET 5 AB5 8 LYS D 499 THR D 506 -1 N ASN D 503 O GLY D 554 SHEET 6 AB5 8 ARG D 491 ILE D 496 -1 N LEU D 492 O ALA D 504 SHEET 7 AB5 8 PHE D 466 VAL D 469 -1 N ILE D 468 O GLU D 493 SHEET 8 AB5 8 LYS D 400 SER D 402 1 N VAL D 401 O VAL D 469 SHEET 1 AB6 3 MET D 278 ASN D 279 0 SHEET 2 AB6 3 LEU D 299 LEU D 303 -1 O TYR D 302 N ASN D 279 SHEET 3 AB6 3 ILE D 291 HIS D 294 -1 N THR D 292 O LEU D 301 SHEET 1 AB7 2 LYS D 377 TYR D 380 0 SHEET 2 AB7 2 ILE D 390 ASP D 393 -1 O ILE D 390 N TYR D 380 CISPEP 1 PRO A 396 PRO A 397 0 0.43 CISPEP 2 GLN A 417 PRO A 418 0 2.83 CISPEP 3 ASN A 441 PRO A 442 0 -2.33 CISPEP 4 PRO B 396 PRO B 397 0 1.04 CISPEP 5 GLN B 417 PRO B 418 0 2.94 CISPEP 6 PRO C 396 PRO C 397 0 1.40 CISPEP 7 GLN C 417 PRO C 418 0 2.98 CISPEP 8 ASN C 441 PRO C 442 0 -0.81 CISPEP 9 PRO D 396 PRO D 397 0 2.41 CISPEP 10 GLN D 417 PRO D 418 0 2.20 SITE 1 AC1 15 GLU A 332 THR A 337 HIS A 338 ASN A 339 SITE 2 AC1 15 PHE A 342 GLU A 500 VAL A 501 LEU A 502 SITE 3 AC1 15 ASN A 503 GLY A 554 ARG A 559 ILE A 570 SITE 4 AC1 15 LYS A 602 HOH A 722 HOH A 744 SITE 1 AC2 13 GLY A 284 ALA A 306 GLU A 308 ARG A 330 SITE 2 AC2 13 GLU A 346 TYR A 348 ASN A 503 TYR A 505 SITE 3 AC2 13 GLU A 507 GLY A 552 GLY A 554 D4U A 601 SITE 4 AC2 13 HOH A 740 SITE 1 AC3 13 ARG B 330 GLU B 332 THR B 337 HIS B 338 SITE 2 AC3 13 ASN B 339 PHE B 342 VAL B 501 LEU B 502 SITE 3 AC3 13 ASN B 503 GLY B 554 LEU B 555 ARG B 559 SITE 4 AC3 13 ILE B 570 SITE 1 AC4 11 GLY B 284 ALA B 285 ALA B 306 GLU B 308 SITE 2 AC4 11 ARG B 330 GLU B 346 TYR B 348 ASN B 503 SITE 3 AC4 11 TYR B 505 GLU B 507 GLY B 552 SITE 1 AC5 11 ARG C 330 GLU C 332 HIS C 338 ASN C 339 SITE 2 AC5 11 PHE C 342 VAL C 501 ASN C 503 GLY C 554 SITE 3 AC5 11 ARG C 559 ILE C 570 HOH C 745 SITE 1 AC6 14 GLY C 284 ALA C 285 ALA C 306 GLU C 308 SITE 2 AC6 14 ARG C 330 GLU C 346 TYR C 348 ASN C 503 SITE 3 AC6 14 ALA C 504 TYR C 505 GLU C 507 GLY C 552 SITE 4 AC6 14 LEU C 553 HOH C 729 SITE 1 AC7 14 ARG D 330 GLU D 332 HIS D 338 ASN D 339 SITE 2 AC7 14 PHE D 342 GLU D 500 VAL D 501 LEU D 502 SITE 3 AC7 14 ASN D 503 GLY D 554 LEU D 555 ARG D 559 SITE 4 AC7 14 LYS D 602 HOH D 722 SITE 1 AC8 11 GLY D 284 ALA D 306 GLU D 308 ARG D 330 SITE 2 AC8 11 GLU D 346 TYR D 348 ASN D 503 TYR D 505 SITE 3 AC8 11 GLU D 507 GLY D 552 D4U D 601 CRYST1 71.045 90.008 100.619 76.43 72.92 79.76 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014076 -0.002542 -0.003906 0.00000 SCALE2 0.000000 0.011290 -0.002231 0.00000 SCALE3 0.000000 0.000000 0.010598 0.00000