data_6KBO # _entry.id 6KBO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.370 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6KBO pdb_00006kbo 10.2210/pdb6kbo/pdb WWPDB D_1300012686 ? ? BMRB 36265 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Three-dimensional LPS bound structure of VG16KRKP-KYE28.' _pdbx_database_related.db_id 36265 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6KBO _pdbx_database_status.recvd_initial_deposition_date 2019-06-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ilyas, H.' 1 0000-0002-5784-9086 'Bhunia, A.' 2 0000-0002-8752-2842 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 294 _citation.language ? _citation.page_first 14615 _citation.page_last 14633 _citation.title ;Structural insights into the combinatorial effects of antimicrobial peptides reveal a role of aromatic-aromatic interactions in antibacterial synergism. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA119.009955 _citation.pdbx_database_id_PubMed 31383740 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ilyas, H.' 1 ? primary 'Kim, J.' 2 ? primary 'Lee, D.' 3 ? primary 'Malmsten, M.' 4 ? primary 'Bhunia, A.' 5 0000-0002-8752-2842 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn VG16KRKP 1765.157 1 ? ? ? ? 2 polymer syn 'Heparin cofactor 2' 3604.239 1 ? ? Helix-D ? # _entity_name_com.entity_id 2 _entity_name_com.name KYE28 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no VARGWKRKCPLFGKGG VARGWKRKCPLFGKGG A ? 2 'polypeptide(L)' no no KYEITTIHNLFRKLTHRLFRRNFGYTLR KYEITTIHNLFRKLTHRLFRRNFGYTLR B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ALA n 1 3 ARG n 1 4 GLY n 1 5 TRP n 1 6 LYS n 1 7 ARG n 1 8 LYS n 1 9 CYS n 1 10 PRO n 1 11 LEU n 1 12 PHE n 1 13 GLY n 1 14 LYS n 1 15 GLY n 1 16 GLY n 2 1 LYS n 2 2 TYR n 2 3 GLU n 2 4 ILE n 2 5 THR n 2 6 THR n 2 7 ILE n 2 8 HIS n 2 9 ASN n 2 10 LEU n 2 11 PHE n 2 12 ARG n 2 13 LYS n 2 14 LEU n 2 15 THR n 2 16 HIS n 2 17 ARG n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 ARG n 2 22 ASN n 2 23 PHE n 2 24 GLY n 2 25 TYR n 2 26 THR n 2 27 LEU n 2 28 ARG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 16 'Dengue virus' ? 12637 ? 2 1 sample 1 28 'Homo sapiens' Human 9606 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6KBO 6KBO ? 1 ? 1 2 UNP HEP2_HUMAN P05546 ? 2 KYEITTIHNLFRKLTHRLFRRNFGYTLR 192 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6KBO A 1 ? 16 ? 6KBO 1 ? 16 ? 1 16 2 2 6KBO B 1 ? 28 ? P05546 192 ? 219 ? 1 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 isotropic 2 1 1 '2D 1H-1H NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.6 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err 0.01 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label experiment _pdbx_nmr_exptl_sample_conditions.pH_err 0.02 _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err 0.01 _pdbx_nmr_exptl_sample_conditions.temperature_err 0.01 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;0.3 mM 1H, Natural Abundance VG16KRKP, 0.3 mM 1H, Natural Abundance KYE28, 55.55 M 1H, Natural Abundance Water, 10 uM 1H, Natural Abundance Lipopolysaccharide, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label VG16KRKP-KYE28 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details 'equipped with 5 mm cryogenic cooled triple resonance probe' # _pdbx_nmr_refine.entry_id 6KBO _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 4 # _pdbx_nmr_ensemble.entry_id 6KBO _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6KBO _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 processing TopSpin 4.0.6 'Bruker Biospin' 2 'chemical shift assignment' Sparky 3.113 Goddard 3 'structure calculation' CYANA v2.1 'Guntert, Mumenthaler and Wuthrich' 4 refinement CYANA v2.1 'Guntert, Mumenthaler and Wuthrich' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6KBO _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6KBO _struct.title 'Three-dimensional LPS bound structure of VG16KRKP-KYE28.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6KBO _struct_keywords.text ;Antimicrobial Peptide, Nuclear Magnetic Spectroscopy, Peptide Synergism, Lipopolysaccharide (LPS), Bacterial Membrane, ANTIMICROBIAL PROTEIN ; _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR B 2 ? ILE B 7 ? TYR B 2 ILE B 7 1 ? 6 HELX_P HELX_P2 AA2 ARG B 17 ? ASN B 22 ? ARG B 17 ASN B 22 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 6KBO _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 TRP 5 5 5 TRP TRP A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 GLY 16 16 16 GLY GLY A . n B 2 1 LYS 1 1 1 LYS LYS B . n B 2 2 TYR 2 2 2 TYR TYR B . n B 2 3 GLU 3 3 3 GLU GLU B . n B 2 4 ILE 4 4 4 ILE ILE B . n B 2 5 THR 5 5 5 THR THR B . n B 2 6 THR 6 6 6 THR THR B . n B 2 7 ILE 7 7 7 ILE ILE B . n B 2 8 HIS 8 8 8 HIS HIS B . n B 2 9 ASN 9 9 9 ASN ASN B . n B 2 10 LEU 10 10 10 LEU LEU B . n B 2 11 PHE 11 11 11 PHE PHE B . n B 2 12 ARG 12 12 12 ARG ARG B . n B 2 13 LYS 13 13 13 LYS LYS B . n B 2 14 LEU 14 14 14 LEU LEU B . n B 2 15 THR 15 15 15 THR THR B . n B 2 16 HIS 16 16 16 HIS HIS B . n B 2 17 ARG 17 17 17 ARG ARG B . n B 2 18 LEU 18 18 18 LEU LEU B . n B 2 19 PHE 19 19 19 PHE PHE B . n B 2 20 ARG 20 20 20 ARG ARG B . n B 2 21 ARG 21 21 21 ARG ARG B . n B 2 22 ASN 22 22 22 ASN ASN B . n B 2 23 PHE 23 23 23 PHE PHE B . n B 2 24 GLY 24 24 24 GLY GLY B . n B 2 25 TYR 25 25 25 TYR TYR B . n B 2 26 THR 26 26 26 THR THR B . n B 2 27 LEU 27 27 27 LEU LEU B . n B 2 28 ARG 28 28 28 ARG ARG B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 860 ? 1 MORE -8 ? 1 'SSA (A^2)' 3990 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-14 2 'Structure model' 1 1 2020-02-26 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 3 'Structure model' '_database_2.pdbx_DOI' 14 3 'Structure model' '_database_2.pdbx_database_accession' 15 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 VG16KRKP 0.3 ? mM '1H, Natural Abundance' 1 KYE28 0.3 ? mM '1H, Natural Abundance' 1 Water 55.55 ? M '1H, Natural Abundance' 1 Lipopolysaccharide 10 ? uM '1H, Natural Abundance' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 2 ? ? -115.51 65.32 2 1 LYS A 8 ? ? -58.73 -77.78 3 1 PRO A 10 ? ? -69.78 36.83 4 1 TYR B 2 ? ? -120.24 -55.20 5 1 THR B 15 ? ? -34.05 122.65 6 1 HIS B 16 ? ? -48.13 97.84 7 1 ARG B 17 ? ? -123.90 -50.42 8 2 LYS A 8 ? ? -65.86 -79.99 9 2 PRO A 10 ? ? -69.66 38.36 10 2 ARG B 17 ? ? -96.63 32.63 11 3 LYS A 8 ? ? -59.08 -76.24 12 3 PRO A 10 ? ? -69.68 37.10 13 3 ASN B 22 ? ? -123.94 -57.04 14 4 ALA A 2 ? ? -115.43 69.57 15 4 LYS A 6 ? ? -121.12 -54.35 16 4 LYS A 8 ? ? -59.48 -77.73 17 4 PRO A 10 ? ? -69.74 37.01 18 4 ASN B 9 ? ? -92.02 -60.17 19 4 LYS B 13 ? ? -120.29 -72.17 20 4 HIS B 16 ? ? -117.36 -120.22 21 4 ASN B 22 ? ? -121.89 -53.47 22 5 LYS A 8 ? ? -49.60 -75.25 23 5 PRO A 10 ? ? -69.66 36.59 24 5 ARG B 12 ? ? -76.02 -74.78 25 5 LEU B 14 ? ? -44.59 102.18 26 5 THR B 15 ? ? -100.20 -92.05 27 5 HIS B 16 ? ? -123.67 -83.37 28 5 PHE B 19 ? ? -121.93 -51.81 29 5 ASN B 22 ? ? -122.98 -55.20 30 6 LYS A 8 ? ? -49.03 -75.89 31 6 PRO A 10 ? ? -69.78 36.41 32 6 LYS B 13 ? ? -120.09 -74.43 33 6 HIS B 16 ? ? -122.29 -100.81 34 6 ASN B 22 ? ? -123.59 -57.76 35 7 ALA A 2 ? ? -100.42 65.12 36 7 LYS A 6 ? ? -120.89 -58.03 37 7 LYS A 8 ? ? -54.86 -75.95 38 7 PRO A 10 ? ? -69.75 37.30 39 7 LYS B 13 ? ? -105.33 -74.98 40 7 LEU B 14 ? ? -116.79 -122.12 41 7 THR B 15 ? ? -121.17 -90.90 42 7 ARG B 17 ? ? -120.87 -52.75 43 7 ASN B 22 ? ? -123.22 -53.40 44 8 LYS A 8 ? ? -50.29 -70.75 45 8 PRO A 10 ? ? -69.76 37.52 46 8 ARG B 12 ? ? -44.77 -83.43 47 8 THR B 15 ? ? -56.04 -94.45 48 8 ARG B 17 ? ? -121.68 -64.94 49 8 LEU B 18 ? ? -68.86 3.23 50 8 ASN B 22 ? ? -122.77 -61.77 51 9 LYS A 8 ? ? -50.69 -74.41 52 9 PRO A 10 ? ? -69.87 37.27 53 9 ARG B 12 ? ? -37.10 -73.64 54 9 THR B 15 ? ? -48.39 -82.59 55 9 ARG B 17 ? ? -121.00 -72.37 56 9 LEU B 18 ? ? -58.56 -8.29 57 10 ALA A 2 ? ? -114.83 66.52 58 10 LEU A 11 ? ? -105.49 -61.07 59 10 LEU B 14 ? ? -57.81 76.71 60 10 ASN B 22 ? ? -122.86 -55.15 61 11 ALA A 2 ? ? -108.48 66.17 62 11 PRO A 10 ? ? -69.78 16.65 63 11 LEU A 11 ? ? -122.59 -77.44 64 11 TYR B 2 ? ? -121.34 -53.09 65 11 LYS B 13 ? ? -110.74 -75.31 66 11 HIS B 16 ? ? -123.68 -98.80 67 11 ASN B 22 ? ? -123.41 -60.37 68 12 CYS A 9 ? ? -93.11 -64.96 69 12 LEU A 11 ? ? -83.74 -76.78 70 12 TYR B 2 ? ? -122.47 -50.78 71 12 HIS B 16 ? ? -111.86 -125.25 72 12 ASN B 22 ? ? -122.59 -56.67 73 13 ALA A 2 ? ? -120.00 72.37 74 13 LYS A 8 ? ? -55.16 -77.03 75 13 PRO A 10 ? ? -69.75 39.25 76 13 LEU B 14 ? ? -27.77 106.28 77 13 HIS B 16 ? ? -55.68 -76.03 78 13 ASN B 22 ? ? -122.66 -54.89 79 14 ALA A 2 ? ? -101.17 64.60 80 14 PRO A 10 ? ? -69.72 21.40 81 14 LEU A 11 ? ? -122.05 -77.81 82 14 TYR B 2 ? ? -121.07 -54.97 83 14 LYS B 13 ? ? -101.48 -74.58 84 14 HIS B 16 ? ? -97.68 -122.50 85 14 ASN B 22 ? ? -123.91 -57.75 86 15 LYS A 6 ? ? -120.46 -54.26 87 15 LYS A 8 ? ? -57.54 -76.47 88 15 PRO A 10 ? ? -69.75 38.88 89 15 ARG B 12 ? ? -48.12 -71.14 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'fluorescence resonance energy transfer' _pdbx_struct_assembly_auth_evidence.details ? #