HEADER TRANSFERASE/DNA 01-JUL-19 6KDA TITLE CRYSTAL STRUCTURE OF HUMAN DNMT3B-DNMT3L IN COMPLEX WITH DNA TITLE 2 CONTAINING CPGPG SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3B; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: DNMT3B,DNA METHYLTRANSFERASE HSAIIIB,M.HSAIIIB; COMPND 5 EC: 2.1.1.37; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3-LIKE; COMPND 9 CHAIN: B, C; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (25-MER); COMPND 13 CHAIN: E, F; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DNMT3B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: DNMT3L; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS DNMT3B, DNA METHYLTRANSFERASE, COMPLEX, TRANSFERASE, TRANSFERASE-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.-C.LIN,Y.-P.CHEN,W.-Z.YANG,C.-K.SHEN,H.S.YUAN REVDAT 4 22-NOV-23 6KDA 1 REMARK REVDAT 3 22-APR-20 6KDA 1 JRNL REVDAT 2 04-MAR-20 6KDA 1 JRNL REVDAT 1 19-FEB-20 6KDA 0 JRNL AUTH C.C.LIN,Y.P.CHEN,W.Z.YANG,J.C.K.SHEN,H.S.YUAN JRNL TITL STRUCTURAL INSIGHTS INTO CPG-SPECIFIC DNA METHYLATION BY JRNL TITL 2 HUMAN DNA METHYLTRANSFERASE 3B. JRNL REF NUCLEIC ACIDS RES. V. 48 3949 2020 JRNL REFN ESSN 1362-4962 JRNL PMID 32083663 JRNL DOI 10.1093/NAR/GKAA111 REMARK 2 REMARK 2 RESOLUTION. 2.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 42169 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2100 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 0.0000 - 7.1433 0.99 2871 132 0.1850 0.1689 REMARK 3 2 7.1433 - 5.6831 1.00 2928 144 0.0000 0.2024 REMARK 3 3 5.6831 - 4.9686 1.00 2943 104 0.0000 0.1865 REMARK 3 4 4.9686 - 4.5161 1.00 2899 152 0.1551 0.1983 REMARK 3 5 4.5161 - 4.1934 1.00 2899 178 0.1499 0.1941 REMARK 3 6 4.1934 - 3.9467 1.00 2949 115 0.1662 0.2108 REMARK 3 7 3.9467 - 3.7495 1.00 2900 157 0.0000 0.2482 REMARK 3 8 3.7495 - 3.5866 1.00 2847 191 0.0000 0.2272 REMARK 3 9 3.5866 - 3.4487 1.00 2891 200 0.0000 0.2782 REMARK 3 10 3.4487 - 3.3299 1.00 2937 114 0.0000 0.2913 REMARK 3 11 3.3299 - 3.2259 1.00 2877 153 0.0000 0.2508 REMARK 3 12 3.2259 - 3.1338 0.99 2877 177 0.0000 0.2566 REMARK 3 13 3.1338 - 3.0514 0.78 2268 118 0.0000 0.2257 REMARK 3 14 3.0514 - 2.9770 0.58 1680 80 0.0000 0.2602 REMARK 3 15 2.9770 - 2.9094 0.46 1303 85 0.0000 0.3208 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 23 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 570 THROUGH 725 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7513 -79.0635 -10.4383 REMARK 3 T TENSOR REMARK 3 T11: 0.3619 T22: 0.2962 REMARK 3 T33: 0.3453 T12: -0.1877 REMARK 3 T13: -0.0852 T23: -0.0562 REMARK 3 L TENSOR REMARK 3 L11: 5.7624 L22: 3.0167 REMARK 3 L33: 4.0625 L12: 0.7648 REMARK 3 L13: 0.3327 L23: -0.3866 REMARK 3 S TENSOR REMARK 3 S11: 0.0760 S12: 0.1264 S13: -0.3174 REMARK 3 S21: -0.0609 S22: -0.1171 S23: 0.5576 REMARK 3 S31: 0.3107 S32: -0.4216 S33: 0.0562 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 726 THROUGH 853 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0664 -72.4135 3.6671 REMARK 3 T TENSOR REMARK 3 T11: 0.4828 T22: 0.5148 REMARK 3 T33: 0.0945 T12: -0.1901 REMARK 3 T13: 0.0179 T23: 0.0526 REMARK 3 L TENSOR REMARK 3 L11: 3.8609 L22: 2.3941 REMARK 3 L33: 2.8976 L12: 1.3541 REMARK 3 L13: 1.4713 L23: 0.4388 REMARK 3 S TENSOR REMARK 3 S11: 0.3078 S12: -0.6466 S13: -0.3961 REMARK 3 S21: 0.6797 S22: -0.2186 S23: 0.3475 REMARK 3 S31: -0.0366 S32: 0.0845 S33: -0.1113 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 176 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4276 -88.0278 -20.3169 REMARK 3 T TENSOR REMARK 3 T11: 0.5025 T22: 1.1437 REMARK 3 T33: 1.7407 T12: -0.2811 REMARK 3 T13: -0.1829 T23: -0.2555 REMARK 3 L TENSOR REMARK 3 L11: 3.8918 L22: 8.0358 REMARK 3 L33: 6.4575 L12: 1.4848 REMARK 3 L13: 4.5075 L23: 4.7505 REMARK 3 S TENSOR REMARK 3 S11: 0.1247 S12: -0.0493 S13: 0.2429 REMARK 3 S21: -0.0167 S22: 0.0869 S23: 0.9546 REMARK 3 S31: 0.2626 S32: -0.9728 S33: -0.1439 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 218 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9808 -78.9592 -13.1398 REMARK 3 T TENSOR REMARK 3 T11: 0.3395 T22: 0.7157 REMARK 3 T33: 1.1011 T12: -0.1028 REMARK 3 T13: -0.0721 T23: -0.2649 REMARK 3 L TENSOR REMARK 3 L11: 9.4385 L22: 4.4461 REMARK 3 L33: 6.3082 L12: 1.4927 REMARK 3 L13: 2.4777 L23: -0.8135 REMARK 3 S TENSOR REMARK 3 S11: -0.1648 S12: -0.1565 S13: 0.8483 REMARK 3 S21: 0.0891 S22: -0.2134 S23: 1.0164 REMARK 3 S31: -0.1659 S32: -0.7394 S33: 0.3347 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 302 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3754 -68.0870 -26.5519 REMARK 3 T TENSOR REMARK 3 T11: 0.7459 T22: 1.1552 REMARK 3 T33: 1.8924 T12: 0.0075 REMARK 3 T13: -0.4883 T23: 0.0518 REMARK 3 L TENSOR REMARK 3 L11: 4.4084 L22: 6.0894 REMARK 3 L33: 4.4951 L12: -5.1441 REMARK 3 L13: 4.2354 L23: -4.7191 REMARK 3 S TENSOR REMARK 3 S11: -0.5085 S12: -0.0656 S13: 1.3938 REMARK 3 S21: 0.0447 S22: 0.4544 S23: 0.7989 REMARK 3 S31: -0.7791 S32: -0.9244 S33: 0.0933 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 319 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6577 -70.9194 -26.3994 REMARK 3 T TENSOR REMARK 3 T11: 0.6825 T22: 1.0937 REMARK 3 T33: 1.6306 T12: -0.0575 REMARK 3 T13: -0.5844 T23: 0.1615 REMARK 3 L TENSOR REMARK 3 L11: 9.3108 L22: 3.6946 REMARK 3 L33: 4.9498 L12: -4.5605 REMARK 3 L13: -0.2509 L23: -0.0878 REMARK 3 S TENSOR REMARK 3 S11: -0.0399 S12: 1.2885 S13: 2.0097 REMARK 3 S21: -0.9442 S22: -0.2885 S23: 0.7303 REMARK 3 S31: -0.6971 S32: -0.8527 S33: 0.3721 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 340 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3863 -58.2897 -19.6318 REMARK 3 T TENSOR REMARK 3 T11: 1.0236 T22: 1.1773 REMARK 3 T33: 2.6048 T12: 0.0730 REMARK 3 T13: -0.4613 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 4.8569 L22: 4.4216 REMARK 3 L33: 3.9277 L12: 1.4030 REMARK 3 L13: -1.6632 L23: 0.3208 REMARK 3 S TENSOR REMARK 3 S11: -0.0819 S12: 0.2909 S13: 0.6244 REMARK 3 S21: -0.0891 S22: -0.2996 S23: 1.5564 REMARK 3 S31: -0.7008 S32: -0.6636 S33: 0.3685 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 361 THROUGH 379 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.2806 -82.6689 -25.9339 REMARK 3 T TENSOR REMARK 3 T11: 0.7611 T22: 1.2795 REMARK 3 T33: 1.8061 T12: -0.1993 REMARK 3 T13: -0.4791 T23: -0.1254 REMARK 3 L TENSOR REMARK 3 L11: 6.2084 L22: 5.1108 REMARK 3 L33: 2.9997 L12: 3.9649 REMARK 3 L13: 1.9363 L23: 1.0209 REMARK 3 S TENSOR REMARK 3 S11: -0.1219 S12: 0.3217 S13: 1.1172 REMARK 3 S21: -0.2957 S22: 0.0954 S23: 1.3711 REMARK 3 S31: -0.0396 S32: -0.9380 S33: 0.1355 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 178 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.6570 -25.2631 9.6124 REMARK 3 T TENSOR REMARK 3 T11: 0.7129 T22: 0.9539 REMARK 3 T33: 1.6811 T12: -0.4686 REMARK 3 T13: -0.4364 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 4.0848 L22: 0.8975 REMARK 3 L33: 2.8693 L12: 1.0291 REMARK 3 L13: 1.5675 L23: 1.3353 REMARK 3 S TENSOR REMARK 3 S11: 0.1596 S12: -0.5187 S13: 0.6380 REMARK 3 S21: 0.0987 S22: 0.1809 S23: 0.0238 REMARK 3 S31: -0.5769 S32: 0.4216 S33: -0.2574 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 207 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.7478 -19.6373 2.5317 REMARK 3 T TENSOR REMARK 3 T11: 1.2366 T22: 1.3021 REMARK 3 T33: 2.0716 T12: -0.6140 REMARK 3 T13: -0.3546 T23: 0.0990 REMARK 3 L TENSOR REMARK 3 L11: 7.1340 L22: 4.6743 REMARK 3 L33: 0.2903 L12: 2.0172 REMARK 3 L13: 0.1074 L23: -1.0580 REMARK 3 S TENSOR REMARK 3 S11: 0.1489 S12: 0.2130 S13: 1.3399 REMARK 3 S21: -0.5265 S22: 0.1374 S23: -0.8101 REMARK 3 S31: -1.2001 S32: 1.3750 S33: -0.3083 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 218 THROUGH 244 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.0007 -31.2816 -3.5890 REMARK 3 T TENSOR REMARK 3 T11: 0.5380 T22: 0.7337 REMARK 3 T33: 1.2939 T12: -0.3163 REMARK 3 T13: -0.2431 T23: 0.0959 REMARK 3 L TENSOR REMARK 3 L11: 5.6566 L22: 6.3928 REMARK 3 L33: 5.6738 L12: 4.0029 REMARK 3 L13: 0.3025 L23: 3.0502 REMARK 3 S TENSOR REMARK 3 S11: -0.5163 S12: 0.7872 S13: 0.6187 REMARK 3 S21: -0.8349 S22: 0.4752 S23: -0.4924 REMARK 3 S31: -0.7559 S32: 0.8885 S33: -0.0810 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 245 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.1770 -20.3833 -4.1353 REMARK 3 T TENSOR REMARK 3 T11: 1.2822 T22: 0.9307 REMARK 3 T33: 2.2355 T12: 0.0349 REMARK 3 T13: -0.6039 T23: 0.2958 REMARK 3 L TENSOR REMARK 3 L11: 1.0637 L22: 4.1882 REMARK 3 L33: 0.3070 L12: -0.7401 REMARK 3 L13: -0.1809 L23: 1.1362 REMARK 3 S TENSOR REMARK 3 S11: -0.1895 S12: 0.9592 S13: 2.6718 REMARK 3 S21: -1.7454 S22: -0.3414 S23: 1.5577 REMARK 3 S31: -2.3049 S32: -1.0775 S33: 0.5385 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 256 THROUGH 291 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.8913 -32.6713 3.9284 REMARK 3 T TENSOR REMARK 3 T11: 0.5070 T22: 0.4970 REMARK 3 T33: 1.0894 T12: -0.2038 REMARK 3 T13: -0.2361 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 5.2371 L22: 6.1901 REMARK 3 L33: 6.7786 L12: 4.9918 REMARK 3 L13: 0.0769 L23: 3.1760 REMARK 3 S TENSOR REMARK 3 S11: -0.1837 S12: -0.0886 S13: 0.8412 REMARK 3 S21: 0.2064 S22: -0.1416 S23: 0.1144 REMARK 3 S31: -0.1930 S32: 0.2204 S33: 0.2594 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 292 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.5847 -27.9277 10.9335 REMARK 3 T TENSOR REMARK 3 T11: 0.7153 T22: 0.7836 REMARK 3 T33: 1.6119 T12: -0.1297 REMARK 3 T13: -0.2197 T23: -0.3145 REMARK 3 L TENSOR REMARK 3 L11: 0.1382 L22: 2.0047 REMARK 3 L33: 7.1571 L12: 0.0600 REMARK 3 L13: -0.8149 L23: 4.6293 REMARK 3 S TENSOR REMARK 3 S11: 0.0226 S12: -0.4511 S13: 1.9779 REMARK 3 S21: 0.4764 S22: -0.4027 S23: 1.2212 REMARK 3 S31: -0.7345 S32: -0.8543 S33: 0.4053 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 319 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.5307 -23.3013 15.1649 REMARK 3 T TENSOR REMARK 3 T11: 1.1101 T22: 0.9089 REMARK 3 T33: 1.7460 T12: -0.2470 REMARK 3 T13: -0.1508 T23: -0.5298 REMARK 3 L TENSOR REMARK 3 L11: 1.0425 L22: 2.0039 REMARK 3 L33: 1.1428 L12: -0.9296 REMARK 3 L13: -0.4833 L23: 1.8006 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: -0.9264 S13: 1.0999 REMARK 3 S21: 1.1318 S22: -0.4325 S23: 1.8041 REMARK 3 S31: -0.6087 S32: -0.4804 S33: 0.4702 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 340 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.9947 -15.4323 9.6295 REMARK 3 T TENSOR REMARK 3 T11: 1.1378 T22: 1.0235 REMARK 3 T33: 2.7926 T12: -0.0986 REMARK 3 T13: -0.0466 T23: -0.7087 REMARK 3 L TENSOR REMARK 3 L11: 4.5254 L22: 8.9903 REMARK 3 L33: 9.4002 L12: 6.0519 REMARK 3 L13: -5.2142 L23: -5.2076 REMARK 3 S TENSOR REMARK 3 S11: -0.0960 S12: -0.1873 S13: 0.4360 REMARK 3 S21: -0.0709 S22: 0.2541 S23: 0.3679 REMARK 3 S31: -0.3090 S32: -0.8630 S33: -0.0998 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 361 THROUGH 379 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.7430 -20.2920 13.9684 REMARK 3 T TENSOR REMARK 3 T11: 1.0127 T22: 1.0176 REMARK 3 T33: 1.7492 T12: -0.3499 REMARK 3 T13: -0.3480 T23: -0.3543 REMARK 3 L TENSOR REMARK 3 L11: 7.0850 L22: 2.7204 REMARK 3 L33: 3.6439 L12: -0.5120 REMARK 3 L13: 0.5313 L23: 0.9928 REMARK 3 S TENSOR REMARK 3 S11: 0.4762 S12: -0.3137 S13: 0.5227 REMARK 3 S21: 0.2517 S22: -0.4179 S23: 0.9881 REMARK 3 S31: -0.7809 S32: 0.2669 S33: 0.0615 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 570 THROUGH 725 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.5693 -51.4408 -1.6961 REMARK 3 T TENSOR REMARK 3 T11: 0.1473 T22: 0.4873 REMARK 3 T33: 0.3504 T12: -0.0696 REMARK 3 T13: -0.0711 T23: -0.0539 REMARK 3 L TENSOR REMARK 3 L11: 4.3536 L22: 4.3082 REMARK 3 L33: 4.3615 L12: 1.6039 REMARK 3 L13: 0.0045 L23: 0.3640 REMARK 3 S TENSOR REMARK 3 S11: -0.0494 S12: -0.0067 S13: 0.3122 REMARK 3 S21: 0.2463 S22: -0.0155 S23: -0.5989 REMARK 3 S31: -0.2109 S32: 0.3935 S33: 0.0642 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 726 THROUGH 853 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.1917 -59.6406 -15.8285 REMARK 3 T TENSOR REMARK 3 T11: 0.3317 T22: 0.6621 REMARK 3 T33: 0.0454 T12: -0.1231 REMARK 3 T13: 0.0503 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 3.3647 L22: 2.7241 REMARK 3 L33: 2.7469 L12: 1.3793 REMARK 3 L13: 0.8080 L23: 1.0736 REMARK 3 S TENSOR REMARK 3 S11: -0.1454 S12: 0.9440 S13: 0.1667 REMARK 3 S21: -0.3841 S22: 0.1771 S23: -0.6405 REMARK 3 S31: -0.0330 S32: -0.0469 S33: -0.0686 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 422 THROUGH 436 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.4004 -41.9006 -17.2782 REMARK 3 T TENSOR REMARK 3 T11: 1.2167 T22: 1.5006 REMARK 3 T33: 1.7924 T12: -0.0105 REMARK 3 T13: 0.2132 T23: 0.7218 REMARK 3 L TENSOR REMARK 3 L11: 5.4605 L22: 8.0250 REMARK 3 L33: 4.6769 L12: -1.5644 REMARK 3 L13: 2.7731 L23: 4.1886 REMARK 3 S TENSOR REMARK 3 S11: -0.0402 S12: 0.6863 S13: 1.4821 REMARK 3 S21: -0.8620 S22: 0.2999 S23: 1.9658 REMARK 3 S31: 0.3825 S32: -1.3723 S33: -0.2816 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 437 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7898 -57.4468 8.1940 REMARK 3 T TENSOR REMARK 3 T11: 1.7878 T22: 1.5659 REMARK 3 T33: 2.1537 T12: -0.5923 REMARK 3 T13: 0.1644 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 8.9501 L22: 5.8503 REMARK 3 L33: 6.0780 L12: 6.8862 REMARK 3 L13: -5.1514 L23: -5.2600 REMARK 3 S TENSOR REMARK 3 S11: 1.2837 S12: -0.5528 S13: 3.5827 REMARK 3 S21: 1.4606 S22: -0.6174 S23: 2.1636 REMARK 3 S31: -2.4631 S32: 2.2734 S33: -0.6434 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 422 THROUGH 436 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5459 -55.0741 5.1491 REMARK 3 T TENSOR REMARK 3 T11: 1.4920 T22: 1.2316 REMARK 3 T33: 1.6381 T12: -0.2008 REMARK 3 T13: 0.4961 T23: -0.1839 REMARK 3 L TENSOR REMARK 3 L11: 9.3729 L22: 5.3899 REMARK 3 L33: 5.2220 L12: -1.4997 REMARK 3 L13: 2.7200 L23: -1.0624 REMARK 3 S TENSOR REMARK 3 S11: 0.5153 S12: -1.3196 S13: 2.9312 REMARK 3 S21: 1.0787 S22: -0.6711 S23: 0.3490 REMARK 3 S31: -1.2984 S32: 1.2322 S33: 0.0962 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 437 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.8414 -38.9136 -20.4091 REMARK 3 T TENSOR REMARK 3 T11: 1.1889 T22: 1.9584 REMARK 3 T33: 2.1540 T12: -0.1121 REMARK 3 T13: 0.0584 T23: 0.0819 REMARK 3 L TENSOR REMARK 3 L11: 9.9389 L22: 2.0190 REMARK 3 L33: 2.0188 L12: -3.6202 REMARK 3 L13: -5.1534 L23: -1.9670 REMARK 3 S TENSOR REMARK 3 S11: 0.1414 S12: 2.2213 S13: 3.8546 REMARK 3 S21: -0.1747 S22: 0.6231 S23: 1.9911 REMARK 3 S31: 0.5478 S32: -2.8768 S33: -0.7852 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KDA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1300012774. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42182 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.909 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.9500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.74500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5YX2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0 MM MES (PH 5.7), 160 MM KCL, 10 MM REMARK 280 MGSO4 AND 14% PEG 400, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.58033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.16067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 568 REMARK 465 HIS A 569 REMARK 465 GLY B 314 REMARK 465 GLY B 315 REMARK 465 SER B 316 REMARK 465 LEU B 317 REMARK 465 ILE B 330 REMARK 465 ARG B 331 REMARK 465 SER B 332 REMARK 465 ARG B 333 REMARK 465 HIS B 334 REMARK 465 TRP B 335 REMARK 465 ALA B 336 REMARK 465 SER B 353 REMARK 465 LYS B 354 REMARK 465 LEU B 355 REMARK 465 ALA B 356 REMARK 465 ALA B 357 REMARK 465 GLY C 176 REMARK 465 HIS C 177 REMARK 465 HIS C 313 REMARK 465 GLY C 314 REMARK 465 GLY C 315 REMARK 465 SER C 316 REMARK 465 LEU C 317 REMARK 465 ARG C 331 REMARK 465 SER C 332 REMARK 465 ARG C 333 REMARK 465 HIS C 334 REMARK 465 TRP C 335 REMARK 465 GLN C 351 REMARK 465 SER C 352 REMARK 465 SER C 353 REMARK 465 LYS C 354 REMARK 465 LEU C 355 REMARK 465 ALA C 356 REMARK 465 ALA C 357 REMARK 465 LYS C 358 REMARK 465 TRP C 359 REMARK 465 GLY D 568 REMARK 465 HIS D 569 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG E 422 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DC E 427 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT E 436 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT E 437 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT F 437 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 626 -147.55 68.14 REMARK 500 ALA A 660 33.66 -82.73 REMARK 500 ALA A 701 67.67 -67.48 REMARK 500 ARG A 731 86.01 -171.56 REMARK 500 ASN A 820 16.11 56.86 REMARK 500 PRO A 845 -6.77 -57.64 REMARK 500 PHE B 196 -54.14 67.52 REMARK 500 TRP B 235 12.56 -66.37 REMARK 500 HIS B 250 111.77 -162.77 REMARK 500 ASN B 287 34.49 -84.39 REMARK 500 PRO B 328 33.17 -67.27 REMARK 500 PHE C 196 -53.54 65.67 REMARK 500 ASN C 287 26.76 -79.93 REMARK 500 LEU C 337 126.23 -30.84 REMARK 500 ASN D 626 -146.74 68.09 REMARK 500 ALA D 660 32.85 -82.17 REMARK 500 ARG D 670 7.83 -67.00 REMARK 500 ALA D 701 67.38 -69.21 REMARK 500 ARG D 731 87.02 -171.57 REMARK 500 ASN D 820 16.98 55.72 REMARK 500 PRO D 845 -7.35 -58.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH D 901 DBREF 6KDA A 571 853 UNP Q9UBC3 DNM3B_HUMAN 571 853 DBREF 6KDA B 178 379 UNP Q9UJW3 DNM3L_HUMAN 178 379 DBREF 6KDA C 178 379 UNP Q9UJW3 DNM3L_HUMAN 178 379 DBREF 6KDA D 571 853 UNP Q9UBC3 DNM3B_HUMAN 571 853 DBREF 6KDA E 422 446 PDB 6KDA 6KDA 422 446 DBREF 6KDA F 422 446 PDB 6KDA 6KDA 422 446 SEQADV 6KDA GLY A 568 UNP Q9UBC3 EXPRESSION TAG SEQADV 6KDA HIS A 569 UNP Q9UBC3 EXPRESSION TAG SEQADV 6KDA MET A 570 UNP Q9UBC3 EXPRESSION TAG SEQADV 6KDA GLY B 176 UNP Q9UJW3 EXPRESSION TAG SEQADV 6KDA HIS B 177 UNP Q9UJW3 EXPRESSION TAG SEQADV 6KDA GLY C 176 UNP Q9UJW3 EXPRESSION TAG SEQADV 6KDA HIS C 177 UNP Q9UJW3 EXPRESSION TAG SEQADV 6KDA GLY D 568 UNP Q9UBC3 EXPRESSION TAG SEQADV 6KDA HIS D 569 UNP Q9UBC3 EXPRESSION TAG SEQADV 6KDA MET D 570 UNP Q9UBC3 EXPRESSION TAG SEQRES 1 A 286 GLY HIS MET ARG ARG ARG PRO ILE ARG VAL LEU SER LEU SEQRES 2 A 286 PHE ASP GLY ILE ALA THR GLY TYR LEU VAL LEU LYS GLU SEQRES 3 A 286 LEU GLY ILE LYS VAL GLY LYS TYR VAL ALA SER GLU VAL SEQRES 4 A 286 CYS GLU GLU SER ILE ALA VAL GLY THR VAL LYS HIS GLU SEQRES 5 A 286 GLY ASN ILE LYS TYR VAL ASN ASP VAL ARG ASN ILE THR SEQRES 6 A 286 LYS LYS ASN ILE GLU GLU TRP GLY PRO PHE ASP LEU VAL SEQRES 7 A 286 ILE GLY GLY SER PRO CYS ASN ASP LEU SER ASN VAL ASN SEQRES 8 A 286 PRO ALA ARG LYS GLY LEU TYR GLU GLY THR GLY ARG LEU SEQRES 9 A 286 PHE PHE GLU PHE TYR HIS LEU LEU ASN TYR SER ARG PRO SEQRES 10 A 286 LYS GLU GLY ASP ASP ARG PRO PHE PHE TRP MET PHE GLU SEQRES 11 A 286 ASN VAL VAL ALA MET LYS VAL GLY ASP LYS ARG ASP ILE SEQRES 12 A 286 SER ARG PHE LEU GLU CYS ASN PRO VAL MET ILE ASP ALA SEQRES 13 A 286 ILE LYS VAL SER ALA ALA HIS ARG ALA ARG TYR PHE TRP SEQRES 14 A 286 GLY ASN LEU PRO GLY MET ASN ARG PRO VAL ILE ALA SER SEQRES 15 A 286 LYS ASN ASP LYS LEU GLU LEU GLN ASP CYS LEU GLU TYR SEQRES 16 A 286 ASN ARG ILE ALA LYS LEU LYS LYS VAL GLN THR ILE THR SEQRES 17 A 286 THR LYS SER ASN SER ILE LYS GLN GLY LYS ASN GLN LEU SEQRES 18 A 286 PHE PRO VAL VAL MET ASN GLY LYS GLU ASP VAL LEU TRP SEQRES 19 A 286 CYS THR GLU LEU GLU ARG ILE PHE GLY PHE PRO VAL HIS SEQRES 20 A 286 TYR THR ASP VAL SER ASN MET GLY ARG GLY ALA ARG GLN SEQRES 21 A 286 LYS LEU LEU GLY ARG SER TRP SER VAL PRO VAL ILE ARG SEQRES 22 A 286 HIS LEU PHE ALA PRO LEU LYS ASP TYR PHE ALA CYS GLU SEQRES 1 B 204 GLY HIS MET PHE GLU THR VAL PRO VAL TRP ARG ARG GLN SEQRES 2 B 204 PRO VAL ARG VAL LEU SER LEU PHE GLU ASP ILE LYS LYS SEQRES 3 B 204 GLU LEU THR SER LEU GLY PHE LEU GLU SER GLY SER ASP SEQRES 4 B 204 PRO GLY GLN LEU LYS HIS VAL VAL ASP VAL THR ASP THR SEQRES 5 B 204 VAL ARG LYS ASP VAL GLU GLU TRP GLY PRO PHE ASP LEU SEQRES 6 B 204 VAL TYR GLY ALA THR PRO PRO LEU GLY HIS THR CYS ASP SEQRES 7 B 204 ARG PRO PRO SER TRP TYR LEU PHE GLN PHE HIS ARG LEU SEQRES 8 B 204 LEU GLN TYR ALA ARG PRO LYS PRO GLY SER PRO ARG PRO SEQRES 9 B 204 PHE PHE TRP MET PHE VAL ASP ASN LEU VAL LEU ASN LYS SEQRES 10 B 204 GLU ASP LEU ASP VAL ALA SER ARG PHE LEU GLU MET GLU SEQRES 11 B 204 PRO VAL THR ILE PRO ASP VAL HIS GLY GLY SER LEU GLN SEQRES 12 B 204 ASN ALA VAL ARG VAL TRP SER ASN ILE PRO ALA ILE ARG SEQRES 13 B 204 SER ARG HIS TRP ALA LEU VAL SER GLU GLU GLU LEU SER SEQRES 14 B 204 LEU LEU ALA GLN ASN LYS GLN SER SER LYS LEU ALA ALA SEQRES 15 B 204 LYS TRP PRO THR LYS LEU VAL LYS ASN CYS PHE LEU PRO SEQRES 16 B 204 LEU ARG GLU TYR PHE LYS TYR PHE SER SEQRES 1 C 204 GLY HIS MET PHE GLU THR VAL PRO VAL TRP ARG ARG GLN SEQRES 2 C 204 PRO VAL ARG VAL LEU SER LEU PHE GLU ASP ILE LYS LYS SEQRES 3 C 204 GLU LEU THR SER LEU GLY PHE LEU GLU SER GLY SER ASP SEQRES 4 C 204 PRO GLY GLN LEU LYS HIS VAL VAL ASP VAL THR ASP THR SEQRES 5 C 204 VAL ARG LYS ASP VAL GLU GLU TRP GLY PRO PHE ASP LEU SEQRES 6 C 204 VAL TYR GLY ALA THR PRO PRO LEU GLY HIS THR CYS ASP SEQRES 7 C 204 ARG PRO PRO SER TRP TYR LEU PHE GLN PHE HIS ARG LEU SEQRES 8 C 204 LEU GLN TYR ALA ARG PRO LYS PRO GLY SER PRO ARG PRO SEQRES 9 C 204 PHE PHE TRP MET PHE VAL ASP ASN LEU VAL LEU ASN LYS SEQRES 10 C 204 GLU ASP LEU ASP VAL ALA SER ARG PHE LEU GLU MET GLU SEQRES 11 C 204 PRO VAL THR ILE PRO ASP VAL HIS GLY GLY SER LEU GLN SEQRES 12 C 204 ASN ALA VAL ARG VAL TRP SER ASN ILE PRO ALA ILE ARG SEQRES 13 C 204 SER ARG HIS TRP ALA LEU VAL SER GLU GLU GLU LEU SER SEQRES 14 C 204 LEU LEU ALA GLN ASN LYS GLN SER SER LYS LEU ALA ALA SEQRES 15 C 204 LYS TRP PRO THR LYS LEU VAL LYS ASN CYS PHE LEU PRO SEQRES 16 C 204 LEU ARG GLU TYR PHE LYS TYR PHE SER SEQRES 1 D 286 GLY HIS MET ARG ARG ARG PRO ILE ARG VAL LEU SER LEU SEQRES 2 D 286 PHE ASP GLY ILE ALA THR GLY TYR LEU VAL LEU LYS GLU SEQRES 3 D 286 LEU GLY ILE LYS VAL GLY LYS TYR VAL ALA SER GLU VAL SEQRES 4 D 286 CYS GLU GLU SER ILE ALA VAL GLY THR VAL LYS HIS GLU SEQRES 5 D 286 GLY ASN ILE LYS TYR VAL ASN ASP VAL ARG ASN ILE THR SEQRES 6 D 286 LYS LYS ASN ILE GLU GLU TRP GLY PRO PHE ASP LEU VAL SEQRES 7 D 286 ILE GLY GLY SER PRO CYS ASN ASP LEU SER ASN VAL ASN SEQRES 8 D 286 PRO ALA ARG LYS GLY LEU TYR GLU GLY THR GLY ARG LEU SEQRES 9 D 286 PHE PHE GLU PHE TYR HIS LEU LEU ASN TYR SER ARG PRO SEQRES 10 D 286 LYS GLU GLY ASP ASP ARG PRO PHE PHE TRP MET PHE GLU SEQRES 11 D 286 ASN VAL VAL ALA MET LYS VAL GLY ASP LYS ARG ASP ILE SEQRES 12 D 286 SER ARG PHE LEU GLU CYS ASN PRO VAL MET ILE ASP ALA SEQRES 13 D 286 ILE LYS VAL SER ALA ALA HIS ARG ALA ARG TYR PHE TRP SEQRES 14 D 286 GLY ASN LEU PRO GLY MET ASN ARG PRO VAL ILE ALA SER SEQRES 15 D 286 LYS ASN ASP LYS LEU GLU LEU GLN ASP CYS LEU GLU TYR SEQRES 16 D 286 ASN ARG ILE ALA LYS LEU LYS LYS VAL GLN THR ILE THR SEQRES 17 D 286 THR LYS SER ASN SER ILE LYS GLN GLY LYS ASN GLN LEU SEQRES 18 D 286 PHE PRO VAL VAL MET ASN GLY LYS GLU ASP VAL LEU TRP SEQRES 19 D 286 CYS THR GLU LEU GLU ARG ILE PHE GLY PHE PRO VAL HIS SEQRES 20 D 286 TYR THR ASP VAL SER ASN MET GLY ARG GLY ALA ARG GLN SEQRES 21 D 286 LYS LEU LEU GLY ARG SER TRP SER VAL PRO VAL ILE ARG SEQRES 22 D 286 HIS LEU PHE ALA PRO LEU LYS ASP TYR PHE ALA CYS GLU SEQRES 1 E 25 DG DA DA DT DT DC DG DG DA DA DA DA DA SEQRES 2 E 25 DT DT DT DT DT DC DC DG DA DA DT DT SEQRES 1 F 25 DG DA DA DT DT DC DG DG DA DA DA DA DA SEQRES 2 F 25 DT DT DT DT DT DC DC DG DA DA DT DT HET SAH A 901 26 HET SAH D 901 26 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 7 SAH 2(C14 H20 N6 O5 S) FORMUL 9 HOH *305(H2 O) HELIX 1 AA1 ALA A 585 GLY A 595 1 11 HELIX 2 AA2 CYS A 607 HIS A 618 1 12 HELIX 3 AA3 ASP A 627 ILE A 631 5 5 HELIX 4 AA4 THR A 632 GLY A 640 1 9 HELIX 5 AA5 ARG A 670 ARG A 683 1 14 HELIX 6 AA6 LYS A 703 LEU A 714 1 12 HELIX 7 AA7 ILE A 724 VAL A 726 5 3 HELIX 8 AA8 GLU A 755 LEU A 760 1 6 HELIX 9 AA9 LYS A 777 LYS A 782 5 6 HELIX 10 AB1 TRP A 801 GLY A 810 1 10 HELIX 11 AB2 GLY A 822 ARG A 832 1 11 HELIX 12 AB3 SER A 835 ALA A 844 1 10 HELIX 13 AB4 PRO A 845 TYR A 849 5 5 HELIX 14 AB5 ILE B 199 THR B 204 1 6 HELIX 15 AB6 SER B 205 GLY B 207 5 3 HELIX 16 AB7 ASP B 223 THR B 227 5 5 HELIX 17 AB8 VAL B 228 TRP B 235 1 8 HELIX 18 AB9 PRO B 255 ARG B 271 1 17 HELIX 19 AC1 ASN B 291 LEU B 302 1 12 HELIX 20 AC2 SER B 339 GLN B 351 1 13 HELIX 21 AC3 PRO B 360 ASN B 366 1 7 HELIX 22 AC4 CYS B 367 TYR B 374 5 8 HELIX 23 AC5 ILE C 199 THR C 204 1 6 HELIX 24 AC6 SER C 205 GLY C 207 5 3 HELIX 25 AC7 ASP C 223 THR C 227 5 5 HELIX 26 AC8 VAL C 228 GLY C 236 1 9 HELIX 27 AC9 PRO C 255 ARG C 271 1 17 HELIX 28 AD1 ASN C 291 LEU C 302 1 12 HELIX 29 AD2 SER C 339 LYS C 350 1 12 HELIX 30 AD3 THR C 361 CYS C 367 1 7 HELIX 31 AD4 PHE C 368 TYR C 374 5 7 HELIX 32 AD5 ALA D 585 LEU D 594 1 10 HELIX 33 AD6 CYS D 607 HIS D 618 1 12 HELIX 34 AD7 ASP D 627 ILE D 631 5 5 HELIX 35 AD8 THR D 632 GLY D 640 1 9 HELIX 36 AD9 THR D 668 ARG D 670 5 3 HELIX 37 AE1 LEU D 671 ARG D 683 1 13 HELIX 38 AE2 LYS D 703 LEU D 714 1 12 HELIX 39 AE3 ILE D 724 VAL D 726 5 3 HELIX 40 AE4 GLU D 755 LEU D 760 1 6 HELIX 41 AE5 TRP D 801 PHE D 809 1 9 HELIX 42 AE6 GLY D 822 ARG D 832 1 11 HELIX 43 AE7 SER D 835 ALA D 844 1 10 HELIX 44 AE8 PRO D 845 TYR D 849 5 5 SHEET 1 AA1 7 LYS A 623 TYR A 624 0 SHEET 2 AA1 7 VAL A 598 SER A 604 1 N ALA A 603 O LYS A 623 SHEET 3 AA1 7 ILE A 575 LEU A 580 1 N VAL A 577 O LYS A 600 SHEET 4 AA1 7 LEU A 644 GLY A 647 1 O LEU A 644 N LEU A 578 SHEET 5 AA1 7 PHE A 693 VAL A 699 1 O PHE A 693 N VAL A 645 SHEET 6 AA1 7 ALA A 732 GLY A 737 -1 O TYR A 734 N ASN A 698 SHEET 7 AA1 7 VAL A 719 ASP A 722 -1 N VAL A 719 O PHE A 735 SHEET 1 AA2 3 ARG A 764 ALA A 766 0 SHEET 2 AA2 3 VAL A 791 MET A 793 -1 O VAL A 792 N ILE A 765 SHEET 3 AA2 3 LYS A 796 ASP A 798 -1 O LYS A 796 N MET A 793 SHEET 1 AA3 6 LEU B 218 VAL B 221 0 SHEET 2 AA3 6 VAL B 192 LEU B 195 1 N SER B 194 O LYS B 219 SHEET 3 AA3 6 LEU B 240 ALA B 244 1 O TYR B 242 N LEU B 195 SHEET 4 AA3 6 PHE B 281 ASP B 286 1 O MET B 283 N VAL B 241 SHEET 5 AA3 6 ASN B 319 SER B 325 -1 O TRP B 324 N PHE B 284 SHEET 6 AA3 6 VAL B 307 ASP B 311 -1 N ILE B 309 O VAL B 321 SHEET 1 AA4 6 LEU C 218 VAL C 221 0 SHEET 2 AA4 6 VAL C 192 LEU C 195 1 N SER C 194 O LYS C 219 SHEET 3 AA4 6 LEU C 240 ALA C 244 1 O TYR C 242 N LEU C 195 SHEET 4 AA4 6 PHE C 281 ASP C 286 1 O MET C 283 N VAL C 241 SHEET 5 AA4 6 ASN C 319 SER C 325 -1 O TRP C 324 N PHE C 284 SHEET 6 AA4 6 VAL C 307 ASP C 311 -1 N VAL C 307 O VAL C 323 SHEET 1 AA5 7 LYS D 623 TYR D 624 0 SHEET 2 AA5 7 VAL D 598 SER D 604 1 N TYR D 601 O LYS D 623 SHEET 3 AA5 7 ILE D 575 LEU D 580 1 N SER D 579 O VAL D 602 SHEET 4 AA5 7 LEU D 644 GLY D 648 1 O ILE D 646 N LEU D 580 SHEET 5 AA5 7 PHE D 693 VAL D 699 1 O MET D 695 N VAL D 645 SHEET 6 AA5 7 ALA D 732 GLY D 737 -1 O TYR D 734 N ASN D 698 SHEET 7 AA5 7 VAL D 719 ASP D 722 -1 N VAL D 719 O PHE D 735 SHEET 1 AA6 3 ARG D 764 ALA D 766 0 SHEET 2 AA6 3 VAL D 791 MET D 793 -1 O VAL D 792 N ILE D 765 SHEET 3 AA6 3 LYS D 796 ASP D 798 -1 O LYS D 796 N MET D 793 CISPEP 1 GLY A 640 PRO A 641 0 -2.27 CISPEP 2 GLY C 236 PRO C 237 0 -1.11 CISPEP 3 GLY D 640 PRO D 641 0 -1.10 SITE 1 AC1 19 PHE A 581 ASP A 582 GLY A 583 ILE A 584 SITE 2 AC1 19 THR A 586 SER A 604 GLU A 605 VAL A 606 SITE 3 AC1 19 ASP A 627 VAL A 628 ARG A 629 GLY A 648 SITE 4 AC1 19 LEU A 671 ARG A 832 SER A 833 TRP A 834 SITE 5 AC1 19 HOH A1011 HOH A1022 HOH A1025 SITE 1 AC2 17 PHE D 581 ASP D 582 GLY D 583 ILE D 584 SITE 2 AC2 17 THR D 586 SER D 604 GLU D 605 VAL D 606 SITE 3 AC2 17 ASP D 627 VAL D 628 ARG D 629 GLY D 648 SITE 4 AC2 17 LEU D 671 ARG D 832 SER D 833 TRP D 834 SITE 5 AC2 17 HOH D1007 CRYST1 193.872 193.872 49.741 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005158 0.002978 0.000000 0.00000 SCALE2 0.000000 0.005956 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020104 0.00000