data_6KDU # _entry.id 6KDU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6KDU pdb_00006kdu 10.2210/pdb6kdu/pdb WWPDB D_1300012236 ? ? # _pdbx_database_related.db_name SASBDB _pdbx_database_related.details 'adenylation domain of MtbLigA' _pdbx_database_related.db_id SASDEU5 _pdbx_database_related.content_type 'associated SAS data' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6KDU _pdbx_database_status.recvd_initial_deposition_date 2019-07-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ramachandran, R.' 1 0000-0002-0723-9861 'Shukla, A.' 2 0000-0003-2824-2709 'Afsar, M.' 3 0000-0002-3062-9219 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr D Struct Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2059-7983 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 77 _citation.language ? _citation.page_first 776 _citation.page_last 789 _citation.title ;Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2059798321003107 _citation.pdbx_database_id_PubMed 34076591 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Afsar, M.' 1 0000-0002-3062-9219 primary 'Shukla, A.' 2 0000-0003-2824-2709 primary 'Kumar, N.' 3 ? primary 'Ramachandran, R.' 4 0000-0002-0723-9861 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6KDU _cell.details ? _cell.formula_units_Z ? _cell.length_a 96.168 _cell.length_a_esd ? _cell.length_b 96.168 _cell.length_b_esd ? _cell.length_c 200.835 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KDU _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA ligase A' 36846.125 1 6.5.1.2 E22A ? ? 2 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 1 ? ? ? ? 3 non-polymer syn 'BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE' 335.227 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 5 water nat water 18.015 103 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LigA,Polydeoxyribonucleotide synthase [NAD(+)]' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QTAPEVLRQWQALAAEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAGFATDFEPVDHLE RMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERL TPGDDYPVPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPA TLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPP EHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;QTAPEVLRQWQALAAEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAGFATDFEPVDHLE RMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERL TPGDDYPVPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPA TLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPP EHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 THR n 1 3 ALA n 1 4 PRO n 1 5 GLU n 1 6 VAL n 1 7 LEU n 1 8 ARG n 1 9 GLN n 1 10 TRP n 1 11 GLN n 1 12 ALA n 1 13 LEU n 1 14 ALA n 1 15 ALA n 1 16 GLU n 1 17 VAL n 1 18 ARG n 1 19 GLU n 1 20 HIS n 1 21 GLN n 1 22 PHE n 1 23 ARG n 1 24 TYR n 1 25 TYR n 1 26 VAL n 1 27 ARG n 1 28 ASP n 1 29 ALA n 1 30 PRO n 1 31 ILE n 1 32 ILE n 1 33 SER n 1 34 ASP n 1 35 ALA n 1 36 GLU n 1 37 PHE n 1 38 ASP n 1 39 GLU n 1 40 LEU n 1 41 LEU n 1 42 ARG n 1 43 ARG n 1 44 LEU n 1 45 GLU n 1 46 ALA n 1 47 LEU n 1 48 GLU n 1 49 GLU n 1 50 GLN n 1 51 HIS n 1 52 PRO n 1 53 GLU n 1 54 LEU n 1 55 ARG n 1 56 THR n 1 57 PRO n 1 58 ASP n 1 59 SER n 1 60 PRO n 1 61 THR n 1 62 GLN n 1 63 LEU n 1 64 VAL n 1 65 GLY n 1 66 GLY n 1 67 ALA n 1 68 GLY n 1 69 PHE n 1 70 ALA n 1 71 THR n 1 72 ASP n 1 73 PHE n 1 74 GLU n 1 75 PRO n 1 76 VAL n 1 77 ASP n 1 78 HIS n 1 79 LEU n 1 80 GLU n 1 81 ARG n 1 82 MET n 1 83 LEU n 1 84 SER n 1 85 LEU n 1 86 ASP n 1 87 ASN n 1 88 ALA n 1 89 PHE n 1 90 THR n 1 91 ALA n 1 92 ASP n 1 93 GLU n 1 94 LEU n 1 95 ALA n 1 96 ALA n 1 97 TRP n 1 98 ALA n 1 99 GLY n 1 100 ARG n 1 101 ILE n 1 102 HIS n 1 103 ALA n 1 104 GLU n 1 105 VAL n 1 106 GLY n 1 107 ASP n 1 108 ALA n 1 109 ALA n 1 110 HIS n 1 111 TYR n 1 112 LEU n 1 113 CYS n 1 114 GLU n 1 115 LEU n 1 116 LYS n 1 117 ILE n 1 118 ASP n 1 119 GLY n 1 120 VAL n 1 121 ALA n 1 122 LEU n 1 123 SER n 1 124 LEU n 1 125 VAL n 1 126 TYR n 1 127 ARG n 1 128 GLU n 1 129 GLY n 1 130 ARG n 1 131 LEU n 1 132 THR n 1 133 ARG n 1 134 ALA n 1 135 SER n 1 136 THR n 1 137 ARG n 1 138 GLY n 1 139 ASP n 1 140 GLY n 1 141 ARG n 1 142 THR n 1 143 GLY n 1 144 GLU n 1 145 ASP n 1 146 VAL n 1 147 THR n 1 148 LEU n 1 149 ASN n 1 150 ALA n 1 151 ARG n 1 152 THR n 1 153 ILE n 1 154 ALA n 1 155 ASP n 1 156 VAL n 1 157 PRO n 1 158 GLU n 1 159 ARG n 1 160 LEU n 1 161 THR n 1 162 PRO n 1 163 GLY n 1 164 ASP n 1 165 ASP n 1 166 TYR n 1 167 PRO n 1 168 VAL n 1 169 PRO n 1 170 GLU n 1 171 VAL n 1 172 LEU n 1 173 GLU n 1 174 VAL n 1 175 ARG n 1 176 GLY n 1 177 GLU n 1 178 VAL n 1 179 PHE n 1 180 PHE n 1 181 ARG n 1 182 LEU n 1 183 ASP n 1 184 ASP n 1 185 PHE n 1 186 GLN n 1 187 ALA n 1 188 LEU n 1 189 ASN n 1 190 ALA n 1 191 SER n 1 192 LEU n 1 193 VAL n 1 194 GLU n 1 195 GLU n 1 196 GLY n 1 197 LYS n 1 198 ALA n 1 199 PRO n 1 200 PHE n 1 201 ALA n 1 202 ASN n 1 203 PRO n 1 204 ARG n 1 205 ASN n 1 206 SER n 1 207 ALA n 1 208 ALA n 1 209 GLY n 1 210 SER n 1 211 LEU n 1 212 ARG n 1 213 GLN n 1 214 LYS n 1 215 ASP n 1 216 PRO n 1 217 ALA n 1 218 VAL n 1 219 THR n 1 220 ALA n 1 221 ARG n 1 222 ARG n 1 223 ARG n 1 224 LEU n 1 225 ARG n 1 226 MET n 1 227 ILE n 1 228 CYS n 1 229 HIS n 1 230 GLY n 1 231 LEU n 1 232 GLY n 1 233 HIS n 1 234 VAL n 1 235 GLU n 1 236 GLY n 1 237 PHE n 1 238 ARG n 1 239 PRO n 1 240 ALA n 1 241 THR n 1 242 LEU n 1 243 HIS n 1 244 GLN n 1 245 ALA n 1 246 TYR n 1 247 LEU n 1 248 ALA n 1 249 LEU n 1 250 ARG n 1 251 ALA n 1 252 TRP n 1 253 GLY n 1 254 LEU n 1 255 PRO n 1 256 VAL n 1 257 SER n 1 258 GLU n 1 259 HIS n 1 260 THR n 1 261 THR n 1 262 LEU n 1 263 ALA n 1 264 THR n 1 265 ASP n 1 266 LEU n 1 267 ALA n 1 268 GLY n 1 269 VAL n 1 270 ARG n 1 271 GLU n 1 272 ARG n 1 273 ILE n 1 274 ASP n 1 275 TYR n 1 276 TRP n 1 277 GLY n 1 278 GLU n 1 279 HIS n 1 280 ARG n 1 281 HIS n 1 282 GLU n 1 283 VAL n 1 284 ASP n 1 285 HIS n 1 286 GLU n 1 287 ILE n 1 288 ASP n 1 289 GLY n 1 290 VAL n 1 291 VAL n 1 292 VAL n 1 293 LYS n 1 294 VAL n 1 295 ASP n 1 296 GLU n 1 297 VAL n 1 298 ALA n 1 299 LEU n 1 300 GLN n 1 301 ARG n 1 302 ARG n 1 303 LEU n 1 304 GLY n 1 305 SER n 1 306 THR n 1 307 SER n 1 308 ARG n 1 309 ALA n 1 310 PRO n 1 311 ARG n 1 312 TRP n 1 313 ALA n 1 314 ILE n 1 315 ALA n 1 316 TYR n 1 317 LYS n 1 318 TYR n 1 319 PRO n 1 320 PRO n 1 321 GLU n 1 322 HIS n 1 323 HIS n 1 324 HIS n 1 325 HIS n 1 326 HIS n 1 327 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 327 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ligA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain H37Rv _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis H37Rv' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 25618 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ;Escherichia coli 'BL21-Gold(DE3)pLysS AG' ; _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 866768 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE60 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DNLJ_MYCTU _struct_ref.pdbx_db_accession P9WNV1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAGFATDFEPVDHLE RMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERL TPGDDYPVPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPA TLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPP E ; _struct_ref.pdbx_align_begin 8 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6KDU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 321 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P9WNV1 _struct_ref_seq.db_align_beg 8 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 328 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 328 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6KDU ALA A 15 ? UNP P9WNV1 GLU 22 'engineered mutation' 22 1 1 6KDU HIS A 322 ? UNP P9WNV1 ? ? 'expression tag' 329 2 1 6KDU HIS A 323 ? UNP P9WNV1 ? ? 'expression tag' 330 3 1 6KDU HIS A 324 ? UNP P9WNV1 ? ? 'expression tag' 331 4 1 6KDU HIS A 325 ? UNP P9WNV1 ? ? 'expression tag' 332 5 1 6KDU HIS A 326 ? UNP P9WNV1 ? ? 'expression tag' 333 6 1 6KDU HIS A 327 ? UNP P9WNV1 ? ? 'expression tag' 334 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NMN non-polymer . 'BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE' 'NICOTINAMIDE MONONUCLEOTIDE' 'C11 H16 N2 O8 P 1' 335.227 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6KDU _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.64 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 66.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1M HEPES Na pH=7.6 0.1M NaCl 1.5 M Ammonium sulfate ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details 'cryo conditions' _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details 'Cilindrical Mirror with 50 nm Pt-coating' _diffrn_detector.detector CMOS _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RDI CMOS_8M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-03-14 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Double Crystal Si111 with LN2 closed loop cooling' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9784 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ELETTRA BEAMLINE 11.2C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9784 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 11.2C _diffrn_source.pdbx_synchrotron_site ELETTRA # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6KDU _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.200 _reflns.d_resolution_low 48.0840 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 28776 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 19.200 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 32.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.074 _reflns.pdbx_Rpim_I_all 0.017 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.200 2.270 ? ? 40047 ? ? ? 2439 100.000 ? ? ? ? 0.939 ? ? ? ? ? ? ? ? 16.400 ? ? ? 3.600 0.969 0.238 ? 1 1 0.899 ? 9.070 48.080 ? ? 7468 ? ? ? 522 99.400 ? ? ? ? 0.021 ? ? ? ? ? ? ? ? 14.300 ? ? ? 102.000 0.022 0.006 ? 2 1 1.000 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 138.660 _refine.B_iso_mean 48.7230 _refine.B_iso_min 18.420 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6KDU _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.2000 _refine.ls_d_res_low 48.0840 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28693 _refine.ls_number_reflns_R_free 1420 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9500 _refine.ls_percent_reflns_R_free 4.9500 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2114 _refine.ls_R_factor_R_free 0.2445 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2097 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1ZAU _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.1100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2500 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.2000 _refine_hist.d_res_low 48.0840 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 2683 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 321 _refine_hist.pdbx_B_iso_mean_ligand 72.29 _refine_hist.pdbx_B_iso_mean_solvent 42.76 _refine_hist.pdbx_number_atoms_protein 2494 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 86 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2000 2.2786 . . 141 2657 100.0000 . . . 0.2855 0.0000 0.2584 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2786 2.3699 . . 139 2658 100.0000 . . . 0.2879 0.0000 0.2269 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3699 2.4777 . . 133 2684 100.0000 . . . 0.2865 0.0000 0.2217 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4777 2.6084 . . 136 2676 100.0000 . . . 0.2635 0.0000 0.2260 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6084 2.7718 . . 145 2683 100.0000 . . . 0.2917 0.0000 0.2260 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7718 2.9857 . . 138 2693 100.0000 . . . 0.2556 0.0000 0.2377 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9857 3.2861 . . 140 2716 100.0000 . . . 0.3175 0.0000 0.2388 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2861 3.7615 . . 137 2749 100.0000 . . . 0.2421 0.0000 0.2059 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7615 4.7384 . . 148 2792 100.0000 . . . 0.2004 0.0000 0.1713 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.7384 48.0840 . . 163 2965 100.0000 . . . 0.2182 0.0000 0.2063 . . . . . . . . . . # _struct.entry_id 6KDU _struct.title ;Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6KDU _struct_keywords.text 'Ligase, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 2 ? VAL A 26 ? THR A 9 VAL A 33 1 ? 25 HELX_P HELX_P2 AA2 SER A 33 ? HIS A 51 ? SER A 40 HIS A 58 1 ? 19 HELX_P HELX_P3 AA3 PRO A 52 ? ARG A 55 ? PRO A 59 ARG A 62 5 ? 4 HELX_P HELX_P4 AA4 SER A 59 ? LEU A 63 ? SER A 66 LEU A 70 5 ? 5 HELX_P HELX_P5 AA5 THR A 90 ? GLY A 106 ? THR A 97 GLY A 113 1 ? 17 HELX_P HELX_P6 AA6 ASP A 107 ? ALA A 109 ? ASP A 114 ALA A 116 5 ? 3 HELX_P HELX_P7 AA7 VAL A 146 ? ARG A 151 ? VAL A 153 ARG A 158 1 ? 6 HELX_P HELX_P8 AA8 ARG A 181 ? GLU A 195 ? ARG A 188 GLU A 202 1 ? 15 HELX_P HELX_P9 AA9 ASN A 202 ? ARG A 212 ? ASN A 209 ARG A 219 1 ? 11 HELX_P HELX_P10 AB1 ASP A 215 ? ARG A 221 ? ASP A 222 ARG A 228 1 ? 7 HELX_P HELX_P11 AB2 THR A 241 ? GLY A 253 ? THR A 248 GLY A 260 1 ? 13 HELX_P HELX_P12 AB3 ASP A 265 ? ARG A 280 ? ASP A 272 ARG A 287 1 ? 16 HELX_P HELX_P13 AB4 HIS A 281 ? VAL A 283 ? HIS A 288 VAL A 290 5 ? 3 HELX_P HELX_P14 AB5 GLU A 296 ? GLY A 304 ? GLU A 303 GLY A 311 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PRO A 75 ? ASP A 77 ? PRO A 82 ASP A 84 AA1 2 THR A 142 ? GLU A 144 ? THR A 149 GLU A 151 AA2 1 ASN A 87 ? ALA A 88 ? ASN A 94 ALA A 95 AA2 2 ALA A 313 ? LYS A 317 ? ALA A 320 LYS A 324 AA2 3 ILE A 287 ? VAL A 294 ? ILE A 294 VAL A 301 AA2 4 TYR A 111 ? ILE A 117 ? TYR A 118 ILE A 124 AA2 5 THR A 261 ? ALA A 263 ? THR A 268 ALA A 270 AA3 1 ARG A 130 ? SER A 135 ? ARG A 137 SER A 142 AA3 2 VAL A 120 ? ARG A 127 ? VAL A 127 ARG A 134 AA3 3 VAL A 171 ? PHE A 179 ? VAL A 178 PHE A 186 AA3 4 ARG A 225 ? GLU A 235 ? ARG A 232 GLU A 242 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 76 ? N VAL A 83 O GLY A 143 ? O GLY A 150 AA2 1 2 N ALA A 88 ? N ALA A 95 O ALA A 315 ? O ALA A 322 AA2 2 3 O TYR A 316 ? O TYR A 323 N VAL A 290 ? N VAL A 297 AA2 3 4 O LYS A 293 ? O LYS A 300 N LEU A 112 ? N LEU A 119 AA2 4 5 N TYR A 111 ? N TYR A 118 O ALA A 263 ? O ALA A 270 AA3 1 2 O ARG A 130 ? O ARG A 137 N ARG A 127 ? N ARG A 134 AA3 2 3 N VAL A 120 ? N VAL A 127 O VAL A 178 ? O VAL A 185 AA3 3 4 N GLU A 173 ? N GLU A 180 O GLY A 232 ? O GLY A 239 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A AMP 401 ? 13 'binding site for residue AMP A 401' AC2 Software A NMN 402 ? 10 'binding site for residue NMN A 402' AC3 Software A SO4 403 ? 6 'binding site for residue SO4 A 403' AC4 Software A SO4 404 ? 5 'binding site for residue SO4 A 404' AC5 Software A SO4 405 ? 2 'binding site for residue SO4 A 405' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 SER A 84 ? SER A 91 . ? 1_555 ? 2 AC1 13 LEU A 85 ? LEU A 92 . ? 1_555 ? 3 AC1 13 ASN A 87 ? ASN A 94 . ? 1_555 ? 4 AC1 13 GLU A 114 ? GLU A 121 . ? 1_555 ? 5 AC1 13 LEU A 115 ? LEU A 122 . ? 1_555 ? 6 AC1 13 LYS A 116 ? LYS A 123 . ? 1_555 ? 7 AC1 13 ILE A 117 ? ILE A 124 . ? 1_555 ? 8 AC1 13 ARG A 137 ? ARG A 144 . ? 1_555 ? 9 AC1 13 GLU A 177 ? GLU A 184 . ? 1_555 ? 10 AC1 13 HIS A 229 ? HIS A 236 . ? 1_555 ? 11 AC1 13 ASP A 288 ? ASP A 295 . ? 1_555 ? 12 AC1 13 LYS A 293 ? LYS A 300 . ? 1_555 ? 13 AC1 13 LYS A 317 ? LYS A 324 . ? 1_555 ? 14 AC2 10 HIS A 20 ? HIS A 27 . ? 1_555 ? 15 AC2 10 TYR A 24 ? TYR A 31 . ? 1_555 ? 16 AC2 10 TYR A 25 ? TYR A 32 . ? 1_555 ? 17 AC2 10 PRO A 30 ? PRO A 37 . ? 1_555 ? 18 AC2 10 ILE A 32 ? ILE A 39 . ? 1_555 ? 19 AC2 10 SER A 33 ? SER A 40 . ? 1_555 ? 20 AC2 10 ASP A 34 ? ASP A 41 . ? 1_555 ? 21 AC2 10 PHE A 37 ? PHE A 44 . ? 1_555 ? 22 AC2 10 ASP A 38 ? ASP A 45 . ? 1_555 ? 23 AC2 10 HOH G . ? HOH A 560 . ? 1_555 ? 24 AC3 6 VAL A 120 ? VAL A 127 . ? 1_555 ? 25 AC3 6 ALA A 121 ? ALA A 128 . ? 1_555 ? 26 AC3 6 ARG A 137 ? ARG A 144 . ? 1_555 ? 27 AC3 6 HOH G . ? HOH A 501 . ? 1_555 ? 28 AC3 6 HOH G . ? HOH A 510 . ? 1_555 ? 29 AC3 6 HOH G . ? HOH A 525 . ? 1_555 ? 30 AC4 5 ARG A 23 ? ARG A 30 . ? 1_555 ? 31 AC4 5 ARG A 27 ? ARG A 34 . ? 1_555 ? 32 AC4 5 VAL A 156 ? VAL A 163 . ? 1_555 ? 33 AC4 5 GLU A 158 ? GLU A 165 . ? 1_555 ? 34 AC4 5 HOH G . ? HOH A 515 . ? 1_555 ? 35 AC5 2 GLY A 236 ? GLY A 243 . ? 1_555 ? 36 AC5 2 PHE A 237 ? PHE A 244 . ? 1_555 ? # _atom_sites.entry_id 6KDU _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010398 _atom_sites.fract_transf_matrix[1][2] 0.006004 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012007 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004979 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 8 8 GLN ALA A . n A 1 2 THR 2 9 9 THR THR A . n A 1 3 ALA 3 10 10 ALA ALA A . n A 1 4 PRO 4 11 11 PRO PRO A . n A 1 5 GLU 5 12 12 GLU GLU A . n A 1 6 VAL 6 13 13 VAL VAL A . n A 1 7 LEU 7 14 14 LEU LEU A . n A 1 8 ARG 8 15 15 ARG ARG A . n A 1 9 GLN 9 16 16 GLN GLN A . n A 1 10 TRP 10 17 17 TRP TRP A . n A 1 11 GLN 11 18 18 GLN GLN A . n A 1 12 ALA 12 19 19 ALA ALA A . n A 1 13 LEU 13 20 20 LEU LEU A . n A 1 14 ALA 14 21 21 ALA ALA A . n A 1 15 ALA 15 22 22 ALA ALA A . n A 1 16 GLU 16 23 23 GLU GLU A . n A 1 17 VAL 17 24 24 VAL VAL A . n A 1 18 ARG 18 25 25 ARG ARG A . n A 1 19 GLU 19 26 26 GLU GLU A . n A 1 20 HIS 20 27 27 HIS HIS A . n A 1 21 GLN 21 28 28 GLN GLN A . n A 1 22 PHE 22 29 29 PHE PHE A . n A 1 23 ARG 23 30 30 ARG ARG A . n A 1 24 TYR 24 31 31 TYR TYR A . n A 1 25 TYR 25 32 32 TYR TYR A . n A 1 26 VAL 26 33 33 VAL VAL A . n A 1 27 ARG 27 34 34 ARG ARG A . n A 1 28 ASP 28 35 35 ASP ASP A . n A 1 29 ALA 29 36 36 ALA ALA A . n A 1 30 PRO 30 37 37 PRO PRO A . n A 1 31 ILE 31 38 38 ILE ILE A . n A 1 32 ILE 32 39 39 ILE ILE A . n A 1 33 SER 33 40 40 SER SER A . n A 1 34 ASP 34 41 41 ASP ASP A . n A 1 35 ALA 35 42 42 ALA ALA A . n A 1 36 GLU 36 43 43 GLU GLU A . n A 1 37 PHE 37 44 44 PHE PHE A . n A 1 38 ASP 38 45 45 ASP ASP A . n A 1 39 GLU 39 46 46 GLU GLU A . n A 1 40 LEU 40 47 47 LEU LEU A . n A 1 41 LEU 41 48 48 LEU LEU A . n A 1 42 ARG 42 49 49 ARG ARG A . n A 1 43 ARG 43 50 50 ARG ARG A . n A 1 44 LEU 44 51 51 LEU LEU A . n A 1 45 GLU 45 52 52 GLU GLU A . n A 1 46 ALA 46 53 53 ALA ALA A . n A 1 47 LEU 47 54 54 LEU LEU A . n A 1 48 GLU 48 55 55 GLU GLU A . n A 1 49 GLU 49 56 56 GLU ALA A . n A 1 50 GLN 50 57 57 GLN GLN A . n A 1 51 HIS 51 58 58 HIS HIS A . n A 1 52 PRO 52 59 59 PRO PRO A . n A 1 53 GLU 53 60 60 GLU GLU A . n A 1 54 LEU 54 61 61 LEU LEU A . n A 1 55 ARG 55 62 62 ARG ARG A . n A 1 56 THR 56 63 63 THR THR A . n A 1 57 PRO 57 64 64 PRO PRO A . n A 1 58 ASP 58 65 65 ASP ASP A . n A 1 59 SER 59 66 66 SER SER A . n A 1 60 PRO 60 67 67 PRO PRO A . n A 1 61 THR 61 68 68 THR THR A . n A 1 62 GLN 62 69 69 GLN GLN A . n A 1 63 LEU 63 70 70 LEU LEU A . n A 1 64 VAL 64 71 71 VAL VAL A . n A 1 65 GLY 65 72 72 GLY GLY A . n A 1 66 GLY 66 73 73 GLY GLY A . n A 1 67 ALA 67 74 74 ALA ALA A . n A 1 68 GLY 68 75 75 GLY GLY A . n A 1 69 PHE 69 76 76 PHE PHE A . n A 1 70 ALA 70 77 77 ALA ALA A . n A 1 71 THR 71 78 78 THR THR A . n A 1 72 ASP 72 79 79 ASP ASP A . n A 1 73 PHE 73 80 80 PHE PHE A . n A 1 74 GLU 74 81 81 GLU ALA A . n A 1 75 PRO 75 82 82 PRO PRO A . n A 1 76 VAL 76 83 83 VAL VAL A . n A 1 77 ASP 77 84 84 ASP ASP A . n A 1 78 HIS 78 85 85 HIS HIS A . n A 1 79 LEU 79 86 86 LEU LEU A . n A 1 80 GLU 80 87 87 GLU GLU A . n A 1 81 ARG 81 88 88 ARG ARG A . n A 1 82 MET 82 89 89 MET MET A . n A 1 83 LEU 83 90 90 LEU LEU A . n A 1 84 SER 84 91 91 SER SER A . n A 1 85 LEU 85 92 92 LEU LEU A . n A 1 86 ASP 86 93 93 ASP ASP A . n A 1 87 ASN 87 94 94 ASN ASN A . n A 1 88 ALA 88 95 95 ALA ALA A . n A 1 89 PHE 89 96 96 PHE PHE A . n A 1 90 THR 90 97 97 THR THR A . n A 1 91 ALA 91 98 98 ALA ALA A . n A 1 92 ASP 92 99 99 ASP ASP A . n A 1 93 GLU 93 100 100 GLU GLU A . n A 1 94 LEU 94 101 101 LEU LEU A . n A 1 95 ALA 95 102 102 ALA ALA A . n A 1 96 ALA 96 103 103 ALA ALA A . n A 1 97 TRP 97 104 104 TRP TRP A . n A 1 98 ALA 98 105 105 ALA ALA A . n A 1 99 GLY 99 106 106 GLY GLY A . n A 1 100 ARG 100 107 107 ARG ARG A . n A 1 101 ILE 101 108 108 ILE ILE A . n A 1 102 HIS 102 109 109 HIS HIS A . n A 1 103 ALA 103 110 110 ALA ALA A . n A 1 104 GLU 104 111 111 GLU GLU A . n A 1 105 VAL 105 112 112 VAL VAL A . n A 1 106 GLY 106 113 113 GLY GLY A . n A 1 107 ASP 107 114 114 ASP ASP A . n A 1 108 ALA 108 115 115 ALA ALA A . n A 1 109 ALA 109 116 116 ALA ALA A . n A 1 110 HIS 110 117 117 HIS HIS A . n A 1 111 TYR 111 118 118 TYR TYR A . n A 1 112 LEU 112 119 119 LEU LEU A . n A 1 113 CYS 113 120 120 CYS CYS A . n A 1 114 GLU 114 121 121 GLU GLU A . n A 1 115 LEU 115 122 122 LEU LEU A . n A 1 116 LYS 116 123 123 LYS LYS A . n A 1 117 ILE 117 124 124 ILE ILE A . n A 1 118 ASP 118 125 125 ASP ASP A . n A 1 119 GLY 119 126 126 GLY GLY A . n A 1 120 VAL 120 127 127 VAL VAL A . n A 1 121 ALA 121 128 128 ALA ALA A . n A 1 122 LEU 122 129 129 LEU LEU A . n A 1 123 SER 123 130 130 SER SER A . n A 1 124 LEU 124 131 131 LEU LEU A . n A 1 125 VAL 125 132 132 VAL VAL A . n A 1 126 TYR 126 133 133 TYR TYR A . n A 1 127 ARG 127 134 134 ARG ARG A . n A 1 128 GLU 128 135 135 GLU GLU A . n A 1 129 GLY 129 136 136 GLY GLY A . n A 1 130 ARG 130 137 137 ARG ARG A . n A 1 131 LEU 131 138 138 LEU LEU A . n A 1 132 THR 132 139 139 THR THR A . n A 1 133 ARG 133 140 140 ARG ARG A . n A 1 134 ALA 134 141 141 ALA ALA A . n A 1 135 SER 135 142 142 SER SER A . n A 1 136 THR 136 143 143 THR THR A . n A 1 137 ARG 137 144 144 ARG ARG A . n A 1 138 GLY 138 145 145 GLY GLY A . n A 1 139 ASP 139 146 146 ASP ASP A . n A 1 140 GLY 140 147 147 GLY GLY A . n A 1 141 ARG 141 148 148 ARG ARG A . n A 1 142 THR 142 149 149 THR THR A . n A 1 143 GLY 143 150 150 GLY GLY A . n A 1 144 GLU 144 151 151 GLU GLU A . n A 1 145 ASP 145 152 152 ASP ASP A . n A 1 146 VAL 146 153 153 VAL VAL A . n A 1 147 THR 147 154 154 THR THR A . n A 1 148 LEU 148 155 155 LEU LEU A . n A 1 149 ASN 149 156 156 ASN ASN A . n A 1 150 ALA 150 157 157 ALA ALA A . n A 1 151 ARG 151 158 158 ARG ARG A . n A 1 152 THR 152 159 159 THR THR A . n A 1 153 ILE 153 160 160 ILE ILE A . n A 1 154 ALA 154 161 161 ALA ALA A . n A 1 155 ASP 155 162 162 ASP ASP A . n A 1 156 VAL 156 163 163 VAL VAL A . n A 1 157 PRO 157 164 164 PRO PRO A . n A 1 158 GLU 158 165 165 GLU GLU A . n A 1 159 ARG 159 166 166 ARG ARG A . n A 1 160 LEU 160 167 167 LEU LEU A . n A 1 161 THR 161 168 168 THR THR A . n A 1 162 PRO 162 169 169 PRO PRO A . n A 1 163 GLY 163 170 170 GLY GLY A . n A 1 164 ASP 164 171 171 ASP ASP A . n A 1 165 ASP 165 172 172 ASP ASP A . n A 1 166 TYR 166 173 173 TYR TYR A . n A 1 167 PRO 167 174 174 PRO PRO A . n A 1 168 VAL 168 175 175 VAL VAL A . n A 1 169 PRO 169 176 176 PRO PRO A . n A 1 170 GLU 170 177 177 GLU GLU A . n A 1 171 VAL 171 178 178 VAL VAL A . n A 1 172 LEU 172 179 179 LEU LEU A . n A 1 173 GLU 173 180 180 GLU GLU A . n A 1 174 VAL 174 181 181 VAL VAL A . n A 1 175 ARG 175 182 182 ARG ARG A . n A 1 176 GLY 176 183 183 GLY GLY A . n A 1 177 GLU 177 184 184 GLU GLU A . n A 1 178 VAL 178 185 185 VAL VAL A . n A 1 179 PHE 179 186 186 PHE PHE A . n A 1 180 PHE 180 187 187 PHE PHE A . n A 1 181 ARG 181 188 188 ARG ARG A . n A 1 182 LEU 182 189 189 LEU LEU A . n A 1 183 ASP 183 190 190 ASP ASP A . n A 1 184 ASP 184 191 191 ASP ASP A . n A 1 185 PHE 185 192 192 PHE PHE A . n A 1 186 GLN 186 193 193 GLN GLN A . n A 1 187 ALA 187 194 194 ALA ALA A . n A 1 188 LEU 188 195 195 LEU LEU A . n A 1 189 ASN 189 196 196 ASN ASN A . n A 1 190 ALA 190 197 197 ALA ALA A . n A 1 191 SER 191 198 198 SER SER A . n A 1 192 LEU 192 199 199 LEU LEU A . n A 1 193 VAL 193 200 200 VAL VAL A . n A 1 194 GLU 194 201 201 GLU ALA A . n A 1 195 GLU 195 202 202 GLU GLU A . n A 1 196 GLY 196 203 203 GLY GLY A . n A 1 197 LYS 197 204 204 LYS LYS A . n A 1 198 ALA 198 205 205 ALA ALA A . n A 1 199 PRO 199 206 206 PRO PRO A . n A 1 200 PHE 200 207 207 PHE PHE A . n A 1 201 ALA 201 208 208 ALA ALA A . n A 1 202 ASN 202 209 209 ASN ASN A . n A 1 203 PRO 203 210 210 PRO PRO A . n A 1 204 ARG 204 211 211 ARG ARG A . n A 1 205 ASN 205 212 212 ASN ASN A . n A 1 206 SER 206 213 213 SER SER A . n A 1 207 ALA 207 214 214 ALA ALA A . n A 1 208 ALA 208 215 215 ALA ALA A . n A 1 209 GLY 209 216 216 GLY GLY A . n A 1 210 SER 210 217 217 SER SER A . n A 1 211 LEU 211 218 218 LEU LEU A . n A 1 212 ARG 212 219 219 ARG ARG A . n A 1 213 GLN 213 220 220 GLN GLN A . n A 1 214 LYS 214 221 221 LYS ALA A . n A 1 215 ASP 215 222 222 ASP ASP A . n A 1 216 PRO 216 223 223 PRO PRO A . n A 1 217 ALA 217 224 224 ALA ALA A . n A 1 218 VAL 218 225 225 VAL VAL A . n A 1 219 THR 219 226 226 THR THR A . n A 1 220 ALA 220 227 227 ALA ALA A . n A 1 221 ARG 221 228 228 ARG ARG A . n A 1 222 ARG 222 229 229 ARG ARG A . n A 1 223 ARG 223 230 230 ARG ARG A . n A 1 224 LEU 224 231 231 LEU LEU A . n A 1 225 ARG 225 232 232 ARG ARG A . n A 1 226 MET 226 233 233 MET MET A . n A 1 227 ILE 227 234 234 ILE ILE A . n A 1 228 CYS 228 235 235 CYS CYS A . n A 1 229 HIS 229 236 236 HIS HIS A . n A 1 230 GLY 230 237 237 GLY GLY A . n A 1 231 LEU 231 238 238 LEU LEU A . n A 1 232 GLY 232 239 239 GLY GLY A . n A 1 233 HIS 233 240 240 HIS HIS A . n A 1 234 VAL 234 241 241 VAL VAL A . n A 1 235 GLU 235 242 242 GLU GLU A . n A 1 236 GLY 236 243 243 GLY GLY A . n A 1 237 PHE 237 244 244 PHE PHE A . n A 1 238 ARG 238 245 245 ARG ARG A . n A 1 239 PRO 239 246 246 PRO PRO A . n A 1 240 ALA 240 247 247 ALA ALA A . n A 1 241 THR 241 248 248 THR THR A . n A 1 242 LEU 242 249 249 LEU LEU A . n A 1 243 HIS 243 250 250 HIS HIS A . n A 1 244 GLN 244 251 251 GLN GLN A . n A 1 245 ALA 245 252 252 ALA ALA A . n A 1 246 TYR 246 253 253 TYR TYR A . n A 1 247 LEU 247 254 254 LEU LEU A . n A 1 248 ALA 248 255 255 ALA ALA A . n A 1 249 LEU 249 256 256 LEU LEU A . n A 1 250 ARG 250 257 257 ARG ARG A . n A 1 251 ALA 251 258 258 ALA ALA A . n A 1 252 TRP 252 259 259 TRP TRP A . n A 1 253 GLY 253 260 260 GLY GLY A . n A 1 254 LEU 254 261 261 LEU LEU A . n A 1 255 PRO 255 262 262 PRO PRO A . n A 1 256 VAL 256 263 263 VAL VAL A . n A 1 257 SER 257 264 264 SER SER A . n A 1 258 GLU 258 265 265 GLU GLU A . n A 1 259 HIS 259 266 266 HIS HIS A . n A 1 260 THR 260 267 267 THR THR A . n A 1 261 THR 261 268 268 THR THR A . n A 1 262 LEU 262 269 269 LEU LEU A . n A 1 263 ALA 263 270 270 ALA ALA A . n A 1 264 THR 264 271 271 THR THR A . n A 1 265 ASP 265 272 272 ASP ASP A . n A 1 266 LEU 266 273 273 LEU LEU A . n A 1 267 ALA 267 274 274 ALA ALA A . n A 1 268 GLY 268 275 275 GLY GLY A . n A 1 269 VAL 269 276 276 VAL VAL A . n A 1 270 ARG 270 277 277 ARG ARG A . n A 1 271 GLU 271 278 278 GLU GLU A . n A 1 272 ARG 272 279 279 ARG ARG A . n A 1 273 ILE 273 280 280 ILE ILE A . n A 1 274 ASP 274 281 281 ASP ASP A . n A 1 275 TYR 275 282 282 TYR TYR A . n A 1 276 TRP 276 283 283 TRP TRP A . n A 1 277 GLY 277 284 284 GLY GLY A . n A 1 278 GLU 278 285 285 GLU ALA A . n A 1 279 HIS 279 286 286 HIS HIS A . n A 1 280 ARG 280 287 287 ARG ARG A . n A 1 281 HIS 281 288 288 HIS HIS A . n A 1 282 GLU 282 289 289 GLU GLU A . n A 1 283 VAL 283 290 290 VAL VAL A . n A 1 284 ASP 284 291 291 ASP ASP A . n A 1 285 HIS 285 292 292 HIS HIS A . n A 1 286 GLU 286 293 293 GLU GLU A . n A 1 287 ILE 287 294 294 ILE ILE A . n A 1 288 ASP 288 295 295 ASP ASP A . n A 1 289 GLY 289 296 296 GLY GLY A . n A 1 290 VAL 290 297 297 VAL VAL A . n A 1 291 VAL 291 298 298 VAL VAL A . n A 1 292 VAL 292 299 299 VAL VAL A . n A 1 293 LYS 293 300 300 LYS LYS A . n A 1 294 VAL 294 301 301 VAL VAL A . n A 1 295 ASP 295 302 302 ASP ASP A . n A 1 296 GLU 296 303 303 GLU GLU A . n A 1 297 VAL 297 304 304 VAL VAL A . n A 1 298 ALA 298 305 305 ALA ALA A . n A 1 299 LEU 299 306 306 LEU LEU A . n A 1 300 GLN 300 307 307 GLN GLN A . n A 1 301 ARG 301 308 308 ARG ARG A . n A 1 302 ARG 302 309 309 ARG ALA A . n A 1 303 LEU 303 310 310 LEU LEU A . n A 1 304 GLY 304 311 311 GLY GLY A . n A 1 305 SER 305 312 312 SER SER A . n A 1 306 THR 306 313 313 THR THR A . n A 1 307 SER 307 314 314 SER SER A . n A 1 308 ARG 308 315 315 ARG ALA A . n A 1 309 ALA 309 316 316 ALA ALA A . n A 1 310 PRO 310 317 317 PRO PRO A . n A 1 311 ARG 311 318 318 ARG ARG A . n A 1 312 TRP 312 319 319 TRP TRP A . n A 1 313 ALA 313 320 320 ALA ALA A . n A 1 314 ILE 314 321 321 ILE ILE A . n A 1 315 ALA 315 322 322 ALA ALA A . n A 1 316 TYR 316 323 323 TYR TYR A . n A 1 317 LYS 317 324 324 LYS LYS A . n A 1 318 TYR 318 325 325 TYR TYR A . n A 1 319 PRO 319 326 326 PRO PRO A . n A 1 320 PRO 320 327 327 PRO PRO A . n A 1 321 GLU 321 328 328 GLU GLU A . n A 1 322 HIS 322 329 ? ? ? A . n A 1 323 HIS 323 330 ? ? ? A . n A 1 324 HIS 324 331 ? ? ? A . n A 1 325 HIS 325 332 ? ? ? A . n A 1 326 HIS 326 333 ? ? ? A . n A 1 327 HIS 327 334 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AMP 1 401 1 AMP AMP A . C 3 NMN 1 402 2 NMN LIG A . D 4 SO4 1 403 2 SO4 SO4 A . E 4 SO4 1 404 3 SO4 SO4 A . F 4 SO4 1 405 4 SO4 SO4 A . G 5 HOH 1 501 47 HOH HOH A . G 5 HOH 2 502 51 HOH HOH A . G 5 HOH 3 503 31 HOH HOH A . G 5 HOH 4 504 118 HOH HOH A . G 5 HOH 5 505 16 HOH HOH A . G 5 HOH 6 506 21 HOH HOH A . G 5 HOH 7 507 70 HOH HOH A . G 5 HOH 8 508 23 HOH HOH A . G 5 HOH 9 509 99 HOH HOH A . G 5 HOH 10 510 20 HOH HOH A . G 5 HOH 11 511 43 HOH HOH A . G 5 HOH 12 512 50 HOH HOH A . G 5 HOH 13 513 32 HOH HOH A . G 5 HOH 14 514 156 HOH HOH A . G 5 HOH 15 515 144 HOH HOH A . G 5 HOH 16 516 54 HOH HOH A . G 5 HOH 17 517 68 HOH HOH A . G 5 HOH 18 518 49 HOH HOH A . G 5 HOH 19 519 36 HOH HOH A . G 5 HOH 20 520 5 HOH HOH A . G 5 HOH 21 521 17 HOH HOH A . G 5 HOH 22 522 14 HOH HOH A . G 5 HOH 23 523 193 HOH HOH A . G 5 HOH 24 524 10 HOH HOH A . G 5 HOH 25 525 188 HOH HOH A . G 5 HOH 26 526 40 HOH HOH A . G 5 HOH 27 527 15 HOH HOH A . G 5 HOH 28 528 11 HOH HOH A . G 5 HOH 29 529 38 HOH HOH A . G 5 HOH 30 530 121 HOH HOH A . G 5 HOH 31 531 96 HOH HOH A . G 5 HOH 32 532 110 HOH HOH A . G 5 HOH 33 533 27 HOH HOH A . G 5 HOH 34 534 4 HOH HOH A . G 5 HOH 35 535 124 HOH HOH A . G 5 HOH 36 536 19 HOH HOH A . G 5 HOH 37 537 63 HOH HOH A . G 5 HOH 38 538 85 HOH HOH A . G 5 HOH 39 539 28 HOH HOH A . G 5 HOH 40 540 56 HOH HOH A . G 5 HOH 41 541 154 HOH HOH A . G 5 HOH 42 542 44 HOH HOH A . G 5 HOH 43 543 46 HOH HOH A . G 5 HOH 44 544 133 HOH HOH A . G 5 HOH 45 545 102 HOH HOH A . G 5 HOH 46 546 136 HOH HOH A . G 5 HOH 47 547 37 HOH HOH A . G 5 HOH 48 548 97 HOH HOH A . G 5 HOH 49 549 115 HOH HOH A . G 5 HOH 50 550 8 HOH HOH A . G 5 HOH 51 551 69 HOH HOH A . G 5 HOH 52 552 53 HOH HOH A . G 5 HOH 53 553 134 HOH HOH A . G 5 HOH 54 554 42 HOH HOH A . G 5 HOH 55 555 34 HOH HOH A . G 5 HOH 56 556 45 HOH HOH A . G 5 HOH 57 557 6 HOH HOH A . G 5 HOH 58 558 159 HOH HOH A . G 5 HOH 59 559 66 HOH HOH A . G 5 HOH 60 560 33 HOH HOH A . G 5 HOH 61 561 86 HOH HOH A . G 5 HOH 62 562 48 HOH HOH A . G 5 HOH 63 563 61 HOH HOH A . G 5 HOH 64 564 12 HOH HOH A . G 5 HOH 65 565 64 HOH HOH A . G 5 HOH 66 566 83 HOH HOH A . G 5 HOH 67 567 157 HOH HOH A . G 5 HOH 68 568 94 HOH HOH A . G 5 HOH 69 569 84 HOH HOH A . G 5 HOH 70 570 79 HOH HOH A . G 5 HOH 71 571 74 HOH HOH A . G 5 HOH 72 572 131 HOH HOH A . G 5 HOH 73 573 101 HOH HOH A . G 5 HOH 74 574 3 HOH HOH A . G 5 HOH 75 575 41 HOH HOH A . G 5 HOH 76 576 25 HOH HOH A . G 5 HOH 77 577 73 HOH HOH A . G 5 HOH 78 578 29 HOH HOH A . G 5 HOH 79 579 92 HOH HOH A . G 5 HOH 80 580 130 HOH HOH A . G 5 HOH 81 581 35 HOH HOH A . G 5 HOH 82 582 191 HOH HOH A . G 5 HOH 83 583 1 HOH HOH A . G 5 HOH 84 584 78 HOH HOH A . G 5 HOH 85 585 167 HOH HOH A . G 5 HOH 86 586 185 HOH HOH A . G 5 HOH 87 587 175 HOH HOH A . G 5 HOH 88 588 141 HOH HOH A . G 5 HOH 89 589 76 HOH HOH A . G 5 HOH 90 590 132 HOH HOH A . G 5 HOH 91 591 186 HOH HOH A . G 5 HOH 92 592 125 HOH HOH A . G 5 HOH 93 593 146 HOH HOH A . G 5 HOH 94 594 91 HOH HOH A . G 5 HOH 95 595 30 HOH HOH A . G 5 HOH 96 596 71 HOH HOH A . G 5 HOH 97 597 142 HOH HOH A . G 5 HOH 98 598 192 HOH HOH A . G 5 HOH 99 599 72 HOH HOH A . G 5 HOH 100 600 129 HOH HOH A . G 5 HOH 101 601 57 HOH HOH A . G 5 HOH 102 602 190 HOH HOH A . G 5 HOH 103 603 114 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 850 ? 1 MORE -14 ? 1 'SSA (A^2)' 15810 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 583 ? G HOH . 2 1 A HOH 601 ? G HOH . 3 1 A HOH 603 ? G HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-07-01 2 'Structure model' 1 1 2021-06-09 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.journal_id_CSD' 3 2 'Structure model' '_citation.journal_id_ISSN' 4 2 'Structure model' '_citation.journal_volume' 5 2 'Structure model' '_citation.page_first' 6 2 'Structure model' '_citation.page_last' 7 2 'Structure model' '_citation.pdbx_database_id_DOI' 8 2 'Structure model' '_citation.pdbx_database_id_PubMed' 9 2 'Structure model' '_citation.title' 10 2 'Structure model' '_citation.year' 11 3 'Structure model' '_database_2.pdbx_DOI' 12 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_entry_details.entry_id 6KDU _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ3 A LYS 123 ? ? O1P A AMP 401 ? ? 1.31 2 1 NZ A LYS 123 ? ? O1P A AMP 401 ? ? 1.33 3 1 CE A LYS 123 ? ? O1P A AMP 401 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CZ A ARG 182 ? ? NH1 A ARG 182 ? ? 1.247 1.326 -0.079 0.013 N 2 1 CD A GLU 184 ? ? OE1 A GLU 184 ? ? 1.176 1.252 -0.076 0.011 N 3 1 CD A GLU 184 ? ? OE2 A GLU 184 ? ? 1.178 1.252 -0.074 0.011 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 230 ? ? -90.48 52.11 2 1 HIS A 236 ? ? -144.99 24.88 3 1 PHE A 244 ? ? -167.12 112.09 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 8 ? CG ? A GLN 1 CG 2 1 Y 1 A GLN 8 ? CD ? A GLN 1 CD 3 1 Y 1 A GLN 8 ? OE1 ? A GLN 1 OE1 4 1 Y 1 A GLN 8 ? NE2 ? A GLN 1 NE2 5 1 Y 1 A GLU 56 ? CG ? A GLU 49 CG 6 1 Y 1 A GLU 56 ? CD ? A GLU 49 CD 7 1 Y 1 A GLU 56 ? OE1 ? A GLU 49 OE1 8 1 Y 1 A GLU 56 ? OE2 ? A GLU 49 OE2 9 1 Y 1 A GLU 81 ? CG ? A GLU 74 CG 10 1 Y 1 A GLU 81 ? CD ? A GLU 74 CD 11 1 Y 1 A GLU 81 ? OE1 ? A GLU 74 OE1 12 1 Y 1 A GLU 81 ? OE2 ? A GLU 74 OE2 13 1 Y 1 A ARG 148 ? CG ? A ARG 141 CG 14 1 Y 1 A ARG 148 ? CD ? A ARG 141 CD 15 1 Y 1 A ARG 148 ? NE ? A ARG 141 NE 16 1 Y 1 A ARG 148 ? CZ ? A ARG 141 CZ 17 1 Y 1 A ARG 148 ? NH1 ? A ARG 141 NH1 18 1 Y 1 A ARG 148 ? NH2 ? A ARG 141 NH2 19 1 Y 1 A GLU 201 ? CG ? A GLU 194 CG 20 1 Y 1 A GLU 201 ? CD ? A GLU 194 CD 21 1 Y 1 A GLU 201 ? OE1 ? A GLU 194 OE1 22 1 Y 1 A GLU 201 ? OE2 ? A GLU 194 OE2 23 1 Y 1 A LYS 221 ? CG ? A LYS 214 CG 24 1 Y 1 A LYS 221 ? CD ? A LYS 214 CD 25 1 Y 1 A LYS 221 ? CE ? A LYS 214 CE 26 1 Y 1 A LYS 221 ? NZ ? A LYS 214 NZ 27 1 Y 1 A ARG 245 ? CG ? A ARG 238 CG 28 1 Y 1 A ARG 245 ? CD ? A ARG 238 CD 29 1 Y 1 A ARG 245 ? NE ? A ARG 238 NE 30 1 Y 1 A ARG 245 ? CZ ? A ARG 238 CZ 31 1 Y 1 A ARG 245 ? NH1 ? A ARG 238 NH1 32 1 Y 1 A ARG 245 ? NH2 ? A ARG 238 NH2 33 1 Y 1 A GLU 285 ? CG ? A GLU 278 CG 34 1 Y 1 A GLU 285 ? CD ? A GLU 278 CD 35 1 Y 1 A GLU 285 ? OE1 ? A GLU 278 OE1 36 1 Y 1 A GLU 285 ? OE2 ? A GLU 278 OE2 37 1 Y 1 A ARG 309 ? CG ? A ARG 302 CG 38 1 Y 1 A ARG 309 ? CD ? A ARG 302 CD 39 1 Y 1 A ARG 309 ? NE ? A ARG 302 NE 40 1 Y 1 A ARG 309 ? CZ ? A ARG 302 CZ 41 1 Y 1 A ARG 309 ? NH1 ? A ARG 302 NH1 42 1 Y 1 A ARG 309 ? NH2 ? A ARG 302 NH2 43 1 Y 1 A ARG 315 ? CG ? A ARG 308 CG 44 1 Y 1 A ARG 315 ? CD ? A ARG 308 CD 45 1 Y 1 A ARG 315 ? NE ? A ARG 308 NE 46 1 Y 1 A ARG 315 ? CZ ? A ARG 308 CZ 47 1 Y 1 A ARG 315 ? NH1 ? A ARG 308 NH1 48 1 Y 1 A ARG 315 ? NH2 ? A ARG 308 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 329 ? A HIS 322 2 1 Y 1 A HIS 330 ? A HIS 323 3 1 Y 1 A HIS 331 ? A HIS 324 4 1 Y 1 A HIS 332 ? A HIS 325 5 1 Y 1 A HIS 333 ? A HIS 326 6 1 Y 1 A HIS 334 ? A HIS 327 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 AMP P P N N 14 AMP O1P O N N 15 AMP O2P O N N 16 AMP O3P O N N 17 AMP "O5'" O N N 18 AMP "C5'" C N N 19 AMP "C4'" C N R 20 AMP "O4'" O N N 21 AMP "C3'" C N S 22 AMP "O3'" O N N 23 AMP "C2'" C N R 24 AMP "O2'" O N N 25 AMP "C1'" C N R 26 AMP N9 N Y N 27 AMP C8 C Y N 28 AMP N7 N Y N 29 AMP C5 C Y N 30 AMP C6 C Y N 31 AMP N6 N N N 32 AMP N1 N Y N 33 AMP C2 C Y N 34 AMP N3 N Y N 35 AMP C4 C Y N 36 AMP HOP2 H N N 37 AMP HOP3 H N N 38 AMP "H5'1" H N N 39 AMP "H5'2" H N N 40 AMP "H4'" H N N 41 AMP "H3'" H N N 42 AMP "HO3'" H N N 43 AMP "H2'" H N N 44 AMP "HO2'" H N N 45 AMP "H1'" H N N 46 AMP H8 H N N 47 AMP HN61 H N N 48 AMP HN62 H N N 49 AMP H2 H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 GLN N N N N 125 GLN CA C N S 126 GLN C C N N 127 GLN O O N N 128 GLN CB C N N 129 GLN CG C N N 130 GLN CD C N N 131 GLN OE1 O N N 132 GLN NE2 N N N 133 GLN OXT O N N 134 GLN H H N N 135 GLN H2 H N N 136 GLN HA H N N 137 GLN HB2 H N N 138 GLN HB3 H N N 139 GLN HG2 H N N 140 GLN HG3 H N N 141 GLN HE21 H N N 142 GLN HE22 H N N 143 GLN HXT H N N 144 GLU N N N N 145 GLU CA C N S 146 GLU C C N N 147 GLU O O N N 148 GLU CB C N N 149 GLU CG C N N 150 GLU CD C N N 151 GLU OE1 O N N 152 GLU OE2 O N N 153 GLU OXT O N N 154 GLU H H N N 155 GLU H2 H N N 156 GLU HA H N N 157 GLU HB2 H N N 158 GLU HB3 H N N 159 GLU HG2 H N N 160 GLU HG3 H N N 161 GLU HE2 H N N 162 GLU HXT H N N 163 GLY N N N N 164 GLY CA C N N 165 GLY C C N N 166 GLY O O N N 167 GLY OXT O N N 168 GLY H H N N 169 GLY H2 H N N 170 GLY HA2 H N N 171 GLY HA3 H N N 172 GLY HXT H N N 173 HIS N N N N 174 HIS CA C N S 175 HIS C C N N 176 HIS O O N N 177 HIS CB C N N 178 HIS CG C Y N 179 HIS ND1 N Y N 180 HIS CD2 C Y N 181 HIS CE1 C Y N 182 HIS NE2 N Y N 183 HIS OXT O N N 184 HIS H H N N 185 HIS H2 H N N 186 HIS HA H N N 187 HIS HB2 H N N 188 HIS HB3 H N N 189 HIS HD1 H N N 190 HIS HD2 H N N 191 HIS HE1 H N N 192 HIS HE2 H N N 193 HIS HXT H N N 194 HOH O O N N 195 HOH H1 H N N 196 HOH H2 H N N 197 ILE N N N N 198 ILE CA C N S 199 ILE C C N N 200 ILE O O N N 201 ILE CB C N S 202 ILE CG1 C N N 203 ILE CG2 C N N 204 ILE CD1 C N N 205 ILE OXT O N N 206 ILE H H N N 207 ILE H2 H N N 208 ILE HA H N N 209 ILE HB H N N 210 ILE HG12 H N N 211 ILE HG13 H N N 212 ILE HG21 H N N 213 ILE HG22 H N N 214 ILE HG23 H N N 215 ILE HD11 H N N 216 ILE HD12 H N N 217 ILE HD13 H N N 218 ILE HXT H N N 219 LEU N N N N 220 LEU CA C N S 221 LEU C C N N 222 LEU O O N N 223 LEU CB C N N 224 LEU CG C N N 225 LEU CD1 C N N 226 LEU CD2 C N N 227 LEU OXT O N N 228 LEU H H N N 229 LEU H2 H N N 230 LEU HA H N N 231 LEU HB2 H N N 232 LEU HB3 H N N 233 LEU HG H N N 234 LEU HD11 H N N 235 LEU HD12 H N N 236 LEU HD13 H N N 237 LEU HD21 H N N 238 LEU HD22 H N N 239 LEU HD23 H N N 240 LEU HXT H N N 241 LYS N N N N 242 LYS CA C N S 243 LYS C C N N 244 LYS O O N N 245 LYS CB C N N 246 LYS CG C N N 247 LYS CD C N N 248 LYS CE C N N 249 LYS NZ N N N 250 LYS OXT O N N 251 LYS H H N N 252 LYS H2 H N N 253 LYS HA H N N 254 LYS HB2 H N N 255 LYS HB3 H N N 256 LYS HG2 H N N 257 LYS HG3 H N N 258 LYS HD2 H N N 259 LYS HD3 H N N 260 LYS HE2 H N N 261 LYS HE3 H N N 262 LYS HZ1 H N N 263 LYS HZ2 H N N 264 LYS HZ3 H N N 265 LYS HXT H N N 266 MET N N N N 267 MET CA C N S 268 MET C C N N 269 MET O O N N 270 MET CB C N N 271 MET CG C N N 272 MET SD S N N 273 MET CE C N N 274 MET OXT O N N 275 MET H H N N 276 MET H2 H N N 277 MET HA H N N 278 MET HB2 H N N 279 MET HB3 H N N 280 MET HG2 H N N 281 MET HG3 H N N 282 MET HE1 H N N 283 MET HE2 H N N 284 MET HE3 H N N 285 MET HXT H N N 286 NMN O3P O N N 287 NMN P P N N 288 NMN O1P O N N 289 NMN O2P O N N 290 NMN O5R O N N 291 NMN C5R C N N 292 NMN C4R C N R 293 NMN O4R O N N 294 NMN C3R C N S 295 NMN O3R O N N 296 NMN C2R C N R 297 NMN O2R O N N 298 NMN C1R C N R 299 NMN N1 N Y N 300 NMN C2 C Y N 301 NMN C3 C Y N 302 NMN C7 C N N 303 NMN O7 O N N 304 NMN N7 N N N 305 NMN C4 C Y N 306 NMN C5 C Y N 307 NMN C6 C Y N 308 NMN H1PO H N N 309 NMN H2PO H N N 310 NMN H5R1 H N N 311 NMN H5R2 H N N 312 NMN H4RC H N N 313 NMN H3RC H N N 314 NMN H3RO H N N 315 NMN H2RC H N N 316 NMN H2RO H N N 317 NMN H1RC H N N 318 NMN HC2 H N N 319 NMN HN71 H N N 320 NMN HN72 H N N 321 NMN HC4 H N N 322 NMN HC5 H N N 323 NMN HC6 H N N 324 PHE N N N N 325 PHE CA C N S 326 PHE C C N N 327 PHE O O N N 328 PHE CB C N N 329 PHE CG C Y N 330 PHE CD1 C Y N 331 PHE CD2 C Y N 332 PHE CE1 C Y N 333 PHE CE2 C Y N 334 PHE CZ C Y N 335 PHE OXT O N N 336 PHE H H N N 337 PHE H2 H N N 338 PHE HA H N N 339 PHE HB2 H N N 340 PHE HB3 H N N 341 PHE HD1 H N N 342 PHE HD2 H N N 343 PHE HE1 H N N 344 PHE HE2 H N N 345 PHE HZ H N N 346 PHE HXT H N N 347 PRO N N N N 348 PRO CA C N S 349 PRO C C N N 350 PRO O O N N 351 PRO CB C N N 352 PRO CG C N N 353 PRO CD C N N 354 PRO OXT O N N 355 PRO H H N N 356 PRO HA H N N 357 PRO HB2 H N N 358 PRO HB3 H N N 359 PRO HG2 H N N 360 PRO HG3 H N N 361 PRO HD2 H N N 362 PRO HD3 H N N 363 PRO HXT H N N 364 SER N N N N 365 SER CA C N S 366 SER C C N N 367 SER O O N N 368 SER CB C N N 369 SER OG O N N 370 SER OXT O N N 371 SER H H N N 372 SER H2 H N N 373 SER HA H N N 374 SER HB2 H N N 375 SER HB3 H N N 376 SER HG H N N 377 SER HXT H N N 378 SO4 S S N N 379 SO4 O1 O N N 380 SO4 O2 O N N 381 SO4 O3 O N N 382 SO4 O4 O N N 383 THR N N N N 384 THR CA C N S 385 THR C C N N 386 THR O O N N 387 THR CB C N R 388 THR OG1 O N N 389 THR CG2 C N N 390 THR OXT O N N 391 THR H H N N 392 THR H2 H N N 393 THR HA H N N 394 THR HB H N N 395 THR HG1 H N N 396 THR HG21 H N N 397 THR HG22 H N N 398 THR HG23 H N N 399 THR HXT H N N 400 TRP N N N N 401 TRP CA C N S 402 TRP C C N N 403 TRP O O N N 404 TRP CB C N N 405 TRP CG C Y N 406 TRP CD1 C Y N 407 TRP CD2 C Y N 408 TRP NE1 N Y N 409 TRP CE2 C Y N 410 TRP CE3 C Y N 411 TRP CZ2 C Y N 412 TRP CZ3 C Y N 413 TRP CH2 C Y N 414 TRP OXT O N N 415 TRP H H N N 416 TRP H2 H N N 417 TRP HA H N N 418 TRP HB2 H N N 419 TRP HB3 H N N 420 TRP HD1 H N N 421 TRP HE1 H N N 422 TRP HE3 H N N 423 TRP HZ2 H N N 424 TRP HZ3 H N N 425 TRP HH2 H N N 426 TRP HXT H N N 427 TYR N N N N 428 TYR CA C N S 429 TYR C C N N 430 TYR O O N N 431 TYR CB C N N 432 TYR CG C Y N 433 TYR CD1 C Y N 434 TYR CD2 C Y N 435 TYR CE1 C Y N 436 TYR CE2 C Y N 437 TYR CZ C Y N 438 TYR OH O N N 439 TYR OXT O N N 440 TYR H H N N 441 TYR H2 H N N 442 TYR HA H N N 443 TYR HB2 H N N 444 TYR HB3 H N N 445 TYR HD1 H N N 446 TYR HD2 H N N 447 TYR HE1 H N N 448 TYR HE2 H N N 449 TYR HH H N N 450 TYR HXT H N N 451 VAL N N N N 452 VAL CA C N S 453 VAL C C N N 454 VAL O O N N 455 VAL CB C N N 456 VAL CG1 C N N 457 VAL CG2 C N N 458 VAL OXT O N N 459 VAL H H N N 460 VAL H2 H N N 461 VAL HA H N N 462 VAL HB H N N 463 VAL HG11 H N N 464 VAL HG12 H N N 465 VAL HG13 H N N 466 VAL HG21 H N N 467 VAL HG22 H N N 468 VAL HG23 H N N 469 VAL HXT H N N 470 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 AMP P O1P doub N N 13 AMP P O2P sing N N 14 AMP P O3P sing N N 15 AMP P "O5'" sing N N 16 AMP O2P HOP2 sing N N 17 AMP O3P HOP3 sing N N 18 AMP "O5'" "C5'" sing N N 19 AMP "C5'" "C4'" sing N N 20 AMP "C5'" "H5'1" sing N N 21 AMP "C5'" "H5'2" sing N N 22 AMP "C4'" "O4'" sing N N 23 AMP "C4'" "C3'" sing N N 24 AMP "C4'" "H4'" sing N N 25 AMP "O4'" "C1'" sing N N 26 AMP "C3'" "O3'" sing N N 27 AMP "C3'" "C2'" sing N N 28 AMP "C3'" "H3'" sing N N 29 AMP "O3'" "HO3'" sing N N 30 AMP "C2'" "O2'" sing N N 31 AMP "C2'" "C1'" sing N N 32 AMP "C2'" "H2'" sing N N 33 AMP "O2'" "HO2'" sing N N 34 AMP "C1'" N9 sing N N 35 AMP "C1'" "H1'" sing N N 36 AMP N9 C8 sing Y N 37 AMP N9 C4 sing Y N 38 AMP C8 N7 doub Y N 39 AMP C8 H8 sing N N 40 AMP N7 C5 sing Y N 41 AMP C5 C6 sing Y N 42 AMP C5 C4 doub Y N 43 AMP C6 N6 sing N N 44 AMP C6 N1 doub Y N 45 AMP N6 HN61 sing N N 46 AMP N6 HN62 sing N N 47 AMP N1 C2 sing Y N 48 AMP C2 N3 doub Y N 49 AMP C2 H2 sing N N 50 AMP N3 C4 sing Y N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 HIS N CA sing N N 168 HIS N H sing N N 169 HIS N H2 sing N N 170 HIS CA C sing N N 171 HIS CA CB sing N N 172 HIS CA HA sing N N 173 HIS C O doub N N 174 HIS C OXT sing N N 175 HIS CB CG sing N N 176 HIS CB HB2 sing N N 177 HIS CB HB3 sing N N 178 HIS CG ND1 sing Y N 179 HIS CG CD2 doub Y N 180 HIS ND1 CE1 doub Y N 181 HIS ND1 HD1 sing N N 182 HIS CD2 NE2 sing Y N 183 HIS CD2 HD2 sing N N 184 HIS CE1 NE2 sing Y N 185 HIS CE1 HE1 sing N N 186 HIS NE2 HE2 sing N N 187 HIS OXT HXT sing N N 188 HOH O H1 sing N N 189 HOH O H2 sing N N 190 ILE N CA sing N N 191 ILE N H sing N N 192 ILE N H2 sing N N 193 ILE CA C sing N N 194 ILE CA CB sing N N 195 ILE CA HA sing N N 196 ILE C O doub N N 197 ILE C OXT sing N N 198 ILE CB CG1 sing N N 199 ILE CB CG2 sing N N 200 ILE CB HB sing N N 201 ILE CG1 CD1 sing N N 202 ILE CG1 HG12 sing N N 203 ILE CG1 HG13 sing N N 204 ILE CG2 HG21 sing N N 205 ILE CG2 HG22 sing N N 206 ILE CG2 HG23 sing N N 207 ILE CD1 HD11 sing N N 208 ILE CD1 HD12 sing N N 209 ILE CD1 HD13 sing N N 210 ILE OXT HXT sing N N 211 LEU N CA sing N N 212 LEU N H sing N N 213 LEU N H2 sing N N 214 LEU CA C sing N N 215 LEU CA CB sing N N 216 LEU CA HA sing N N 217 LEU C O doub N N 218 LEU C OXT sing N N 219 LEU CB CG sing N N 220 LEU CB HB2 sing N N 221 LEU CB HB3 sing N N 222 LEU CG CD1 sing N N 223 LEU CG CD2 sing N N 224 LEU CG HG sing N N 225 LEU CD1 HD11 sing N N 226 LEU CD1 HD12 sing N N 227 LEU CD1 HD13 sing N N 228 LEU CD2 HD21 sing N N 229 LEU CD2 HD22 sing N N 230 LEU CD2 HD23 sing N N 231 LEU OXT HXT sing N N 232 LYS N CA sing N N 233 LYS N H sing N N 234 LYS N H2 sing N N 235 LYS CA C sing N N 236 LYS CA CB sing N N 237 LYS CA HA sing N N 238 LYS C O doub N N 239 LYS C OXT sing N N 240 LYS CB CG sing N N 241 LYS CB HB2 sing N N 242 LYS CB HB3 sing N N 243 LYS CG CD sing N N 244 LYS CG HG2 sing N N 245 LYS CG HG3 sing N N 246 LYS CD CE sing N N 247 LYS CD HD2 sing N N 248 LYS CD HD3 sing N N 249 LYS CE NZ sing N N 250 LYS CE HE2 sing N N 251 LYS CE HE3 sing N N 252 LYS NZ HZ1 sing N N 253 LYS NZ HZ2 sing N N 254 LYS NZ HZ3 sing N N 255 LYS OXT HXT sing N N 256 MET N CA sing N N 257 MET N H sing N N 258 MET N H2 sing N N 259 MET CA C sing N N 260 MET CA CB sing N N 261 MET CA HA sing N N 262 MET C O doub N N 263 MET C OXT sing N N 264 MET CB CG sing N N 265 MET CB HB2 sing N N 266 MET CB HB3 sing N N 267 MET CG SD sing N N 268 MET CG HG2 sing N N 269 MET CG HG3 sing N N 270 MET SD CE sing N N 271 MET CE HE1 sing N N 272 MET CE HE2 sing N N 273 MET CE HE3 sing N N 274 MET OXT HXT sing N N 275 NMN O3P P doub N N 276 NMN P O1P sing N N 277 NMN P O2P sing N N 278 NMN P O5R sing N N 279 NMN O1P H1PO sing N N 280 NMN O2P H2PO sing N N 281 NMN O5R C5R sing N N 282 NMN C5R C4R sing N N 283 NMN C5R H5R1 sing N N 284 NMN C5R H5R2 sing N N 285 NMN C4R O4R sing N N 286 NMN C4R C3R sing N N 287 NMN C4R H4RC sing N N 288 NMN O4R C1R sing N N 289 NMN C3R O3R sing N N 290 NMN C3R C2R sing N N 291 NMN C3R H3RC sing N N 292 NMN O3R H3RO sing N N 293 NMN C2R O2R sing N N 294 NMN C2R C1R sing N N 295 NMN C2R H2RC sing N N 296 NMN O2R H2RO sing N N 297 NMN C1R N1 sing N N 298 NMN C1R H1RC sing N N 299 NMN N1 C2 doub Y N 300 NMN N1 C6 sing Y N 301 NMN C2 C3 sing Y N 302 NMN C2 HC2 sing N N 303 NMN C3 C7 sing N N 304 NMN C3 C4 doub Y N 305 NMN C7 O7 doub N N 306 NMN C7 N7 sing N N 307 NMN N7 HN71 sing N N 308 NMN N7 HN72 sing N N 309 NMN C4 C5 sing Y N 310 NMN C4 HC4 sing N N 311 NMN C5 C6 doub Y N 312 NMN C5 HC5 sing N N 313 NMN C6 HC6 sing N N 314 PHE N CA sing N N 315 PHE N H sing N N 316 PHE N H2 sing N N 317 PHE CA C sing N N 318 PHE CA CB sing N N 319 PHE CA HA sing N N 320 PHE C O doub N N 321 PHE C OXT sing N N 322 PHE CB CG sing N N 323 PHE CB HB2 sing N N 324 PHE CB HB3 sing N N 325 PHE CG CD1 doub Y N 326 PHE CG CD2 sing Y N 327 PHE CD1 CE1 sing Y N 328 PHE CD1 HD1 sing N N 329 PHE CD2 CE2 doub Y N 330 PHE CD2 HD2 sing N N 331 PHE CE1 CZ doub Y N 332 PHE CE1 HE1 sing N N 333 PHE CE2 CZ sing Y N 334 PHE CE2 HE2 sing N N 335 PHE CZ HZ sing N N 336 PHE OXT HXT sing N N 337 PRO N CA sing N N 338 PRO N CD sing N N 339 PRO N H sing N N 340 PRO CA C sing N N 341 PRO CA CB sing N N 342 PRO CA HA sing N N 343 PRO C O doub N N 344 PRO C OXT sing N N 345 PRO CB CG sing N N 346 PRO CB HB2 sing N N 347 PRO CB HB3 sing N N 348 PRO CG CD sing N N 349 PRO CG HG2 sing N N 350 PRO CG HG3 sing N N 351 PRO CD HD2 sing N N 352 PRO CD HD3 sing N N 353 PRO OXT HXT sing N N 354 SER N CA sing N N 355 SER N H sing N N 356 SER N H2 sing N N 357 SER CA C sing N N 358 SER CA CB sing N N 359 SER CA HA sing N N 360 SER C O doub N N 361 SER C OXT sing N N 362 SER CB OG sing N N 363 SER CB HB2 sing N N 364 SER CB HB3 sing N N 365 SER OG HG sing N N 366 SER OXT HXT sing N N 367 SO4 S O1 doub N N 368 SO4 S O2 doub N N 369 SO4 S O3 sing N N 370 SO4 S O4 sing N N 371 THR N CA sing N N 372 THR N H sing N N 373 THR N H2 sing N N 374 THR CA C sing N N 375 THR CA CB sing N N 376 THR CA HA sing N N 377 THR C O doub N N 378 THR C OXT sing N N 379 THR CB OG1 sing N N 380 THR CB CG2 sing N N 381 THR CB HB sing N N 382 THR OG1 HG1 sing N N 383 THR CG2 HG21 sing N N 384 THR CG2 HG22 sing N N 385 THR CG2 HG23 sing N N 386 THR OXT HXT sing N N 387 TRP N CA sing N N 388 TRP N H sing N N 389 TRP N H2 sing N N 390 TRP CA C sing N N 391 TRP CA CB sing N N 392 TRP CA HA sing N N 393 TRP C O doub N N 394 TRP C OXT sing N N 395 TRP CB CG sing N N 396 TRP CB HB2 sing N N 397 TRP CB HB3 sing N N 398 TRP CG CD1 doub Y N 399 TRP CG CD2 sing Y N 400 TRP CD1 NE1 sing Y N 401 TRP CD1 HD1 sing N N 402 TRP CD2 CE2 doub Y N 403 TRP CD2 CE3 sing Y N 404 TRP NE1 CE2 sing Y N 405 TRP NE1 HE1 sing N N 406 TRP CE2 CZ2 sing Y N 407 TRP CE3 CZ3 doub Y N 408 TRP CE3 HE3 sing N N 409 TRP CZ2 CH2 doub Y N 410 TRP CZ2 HZ2 sing N N 411 TRP CZ3 CH2 sing Y N 412 TRP CZ3 HZ3 sing N N 413 TRP CH2 HH2 sing N N 414 TRP OXT HXT sing N N 415 TYR N CA sing N N 416 TYR N H sing N N 417 TYR N H2 sing N N 418 TYR CA C sing N N 419 TYR CA CB sing N N 420 TYR CA HA sing N N 421 TYR C O doub N N 422 TYR C OXT sing N N 423 TYR CB CG sing N N 424 TYR CB HB2 sing N N 425 TYR CB HB3 sing N N 426 TYR CG CD1 doub Y N 427 TYR CG CD2 sing Y N 428 TYR CD1 CE1 sing Y N 429 TYR CD1 HD1 sing N N 430 TYR CD2 CE2 doub Y N 431 TYR CD2 HD2 sing N N 432 TYR CE1 CZ doub Y N 433 TYR CE1 HE1 sing N N 434 TYR CE2 CZ sing Y N 435 TYR CE2 HE2 sing N N 436 TYR CZ OH sing N N 437 TYR OH HH sing N N 438 TYR OXT HXT sing N N 439 VAL N CA sing N N 440 VAL N H sing N N 441 VAL N H2 sing N N 442 VAL CA C sing N N 443 VAL CA CB sing N N 444 VAL CA HA sing N N 445 VAL C O doub N N 446 VAL C OXT sing N N 447 VAL CB CG1 sing N N 448 VAL CB CG2 sing N N 449 VAL CB HB sing N N 450 VAL CG1 HG11 sing N N 451 VAL CG1 HG12 sing N N 452 VAL CG1 HG13 sing N N 453 VAL CG2 HG21 sing N N 454 VAL CG2 HG22 sing N N 455 VAL CG2 HG23 sing N N 456 VAL OXT HXT sing N N 457 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 AMP ? ? AMP ? ? 'SUBJECT OF INVESTIGATION' ? 2 NMN ? ? NMN ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ADENOSINE MONOPHOSPHATE' AMP 3 'BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE' NMN 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZAU _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #