HEADER BIOSYNTHETIC PROTEIN 09-JUL-19 6KFZ TITLE SUFS FROM BACILLUS SUBTILIS, SOAKED WITH L-CYSTEINE FOR 90 SEC AT 1.96 TITLE 2 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE DESULFURASE SUFS; COMPND 3 CHAIN: A; COMPND 4 EC: 2.8.1.7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS (STRAIN 168); SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: SUFS, CSD, YURW, BSU32690; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41 KEYWDS IRON, SULFUR, CYSTEINE DESULFURASE, REACTION INTERMEDIATE, KEYWDS 2 BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.NAKAMURA,Y.TAKAHASHI,T.FUJISHIRO REVDAT 4 22-NOV-23 6KFZ 1 LINK REVDAT 3 01-APR-20 6KFZ 1 JRNL REVDAT 2 23-OCT-19 6KFZ 1 JRNL REVDAT 1 16-OCT-19 6KFZ 0 JRNL AUTH R.NAKAMURA,M.HIKITA,S.OGAWA,Y.TAKAHASHI,T.FUJISHIRO JRNL TITL SNAPSHOTS OF PLP-SUBSTRATE AND PLP-PRODUCT EXTERNAL JRNL TITL 2 ALDIMINES AS INTERMEDIATES IN TWO TYPES OF CYSTEINE JRNL TITL 3 DESULFURASE ENZYMES. JRNL REF FEBS J. V. 287 1138 2020 JRNL REFN ISSN 1742-464X JRNL PMID 31587510 JRNL DOI 10.1111/FEBS.15081 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 46568 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2328 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.0770 - 5.0347 1.00 2773 146 0.1549 0.1600 REMARK 3 2 5.0347 - 3.9982 1.00 2682 141 0.1284 0.1489 REMARK 3 3 3.9982 - 3.4934 1.00 2626 138 0.1479 0.1622 REMARK 3 4 3.4934 - 3.1742 1.00 2601 137 0.1733 0.1930 REMARK 3 5 3.1742 - 2.9468 1.00 2623 138 0.1716 0.2032 REMARK 3 6 2.9468 - 2.7732 1.00 2584 136 0.1719 0.1989 REMARK 3 7 2.7732 - 2.6343 1.00 2586 136 0.1657 0.1826 REMARK 3 8 2.6343 - 2.5197 1.00 2596 137 0.1551 0.1708 REMARK 3 9 2.5197 - 2.4227 1.00 2581 135 0.1625 0.2032 REMARK 3 10 2.4227 - 2.3392 1.00 2580 136 0.1562 0.1757 REMARK 3 11 2.3392 - 2.2660 1.00 2565 135 0.1554 0.1841 REMARK 3 12 2.2660 - 2.2013 1.00 2572 136 0.1550 0.1926 REMARK 3 13 2.2013 - 2.1433 1.00 2570 135 0.1526 0.1801 REMARK 3 14 2.1433 - 2.0910 1.00 2596 137 0.1555 0.1724 REMARK 3 15 2.0910 - 2.0435 1.00 2574 135 0.1700 0.1916 REMARK 3 16 2.0435 - 2.0000 1.00 2560 135 0.1738 0.2194 REMARK 3 17 2.0000 - 1.9600 1.00 2571 135 0.2061 0.2509 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3966 -49.0316 -35.4042 REMARK 3 T TENSOR REMARK 3 T11: 0.1818 T22: 0.3886 REMARK 3 T33: 0.2857 T12: 0.0264 REMARK 3 T13: -0.0321 T23: -0.0346 REMARK 3 L TENSOR REMARK 3 L11: 2.6732 L22: 3.1129 REMARK 3 L33: 3.2239 L12: 0.5778 REMARK 3 L13: 0.5111 L23: 0.6732 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: -0.2799 S13: -0.1163 REMARK 3 S21: 0.0988 S22: 0.0650 S23: -0.4654 REMARK 3 S31: 0.0821 S32: 0.7002 S33: -0.0935 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4185 -54.5907 -34.8574 REMARK 3 T TENSOR REMARK 3 T11: 0.2059 T22: 0.2169 REMARK 3 T33: 0.1387 T12: -0.0103 REMARK 3 T13: -0.0140 T23: 0.0364 REMARK 3 L TENSOR REMARK 3 L11: 3.7564 L22: 2.7817 REMARK 3 L33: 3.0682 L12: 1.1589 REMARK 3 L13: -0.0709 L23: 0.8003 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: -0.2774 S13: -0.0569 REMARK 3 S21: 0.0907 S22: -0.0508 S23: 0.1589 REMARK 3 S31: 0.2868 S32: -0.2924 S33: 0.0368 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2010 -30.7506 -31.8220 REMARK 3 T TENSOR REMARK 3 T11: 0.2126 T22: 0.3381 REMARK 3 T33: 0.3974 T12: 0.0444 REMARK 3 T13: -0.0388 T23: -0.1242 REMARK 3 L TENSOR REMARK 3 L11: 1.6260 L22: 4.0159 REMARK 3 L33: 2.2567 L12: 0.7862 REMARK 3 L13: -0.0138 L23: -1.0478 REMARK 3 S TENSOR REMARK 3 S11: -0.1165 S12: -0.3042 S13: 0.5167 REMARK 3 S21: 0.0649 S22: 0.1050 S23: 0.6035 REMARK 3 S31: -0.3215 S32: -0.3016 S33: -0.0026 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6158 -26.9077 -27.7325 REMARK 3 T TENSOR REMARK 3 T11: 0.3023 T22: 0.3426 REMARK 3 T33: 0.3606 T12: 0.0102 REMARK 3 T13: -0.0233 T23: -0.1583 REMARK 3 L TENSOR REMARK 3 L11: 2.3790 L22: 2.0733 REMARK 3 L33: 1.8331 L12: -0.2128 REMARK 3 L13: -0.0329 L23: 0.1658 REMARK 3 S TENSOR REMARK 3 S11: -0.0663 S12: -0.4943 S13: 0.6281 REMARK 3 S21: 0.2240 S22: 0.0447 S23: 0.0667 REMARK 3 S31: -0.4161 S32: 0.0106 S33: 0.0323 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 254 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6863 -43.7936 -34.5138 REMARK 3 T TENSOR REMARK 3 T11: 0.1998 T22: 0.2855 REMARK 3 T33: 0.2276 T12: -0.0348 REMARK 3 T13: 0.0229 T23: -0.0531 REMARK 3 L TENSOR REMARK 3 L11: 4.9776 L22: 2.4548 REMARK 3 L33: 2.4937 L12: -1.1823 REMARK 3 L13: 1.2595 L23: -0.2895 REMARK 3 S TENSOR REMARK 3 S11: -0.1052 S12: -0.6025 S13: 0.1792 REMARK 3 S21: 0.0815 S22: 0.0779 S23: 0.3310 REMARK 3 S31: -0.0612 S32: -0.3676 S33: 0.0225 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 296 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.3777 -34.4729 -24.7956 REMARK 3 T TENSOR REMARK 3 T11: 0.3326 T22: 0.5300 REMARK 3 T33: 0.3130 T12: -0.0343 REMARK 3 T13: -0.0670 T23: -0.1236 REMARK 3 L TENSOR REMARK 3 L11: 4.9781 L22: 3.7926 REMARK 3 L33: 0.4867 L12: 2.2438 REMARK 3 L13: 0.7477 L23: -0.2107 REMARK 3 S TENSOR REMARK 3 S11: 0.1726 S12: -0.6180 S13: 0.2781 REMARK 3 S21: 0.4368 S22: -0.2365 S23: -0.1156 REMARK 3 S31: -0.2655 S32: 0.4033 S33: 0.0960 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 331 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0101 -30.1952 -38.3885 REMARK 3 T TENSOR REMARK 3 T11: 0.2982 T22: 0.4411 REMARK 3 T33: 0.3852 T12: -0.0924 REMARK 3 T13: -0.0504 T23: -0.0559 REMARK 3 L TENSOR REMARK 3 L11: 2.0799 L22: 2.9462 REMARK 3 L33: 1.7923 L12: -0.6561 REMARK 3 L13: 0.1011 L23: -0.0875 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: 0.1765 S13: 0.4124 REMARK 3 S21: 0.0185 S22: -0.0175 S23: -0.3521 REMARK 3 S31: -0.3074 S32: 0.4298 S33: 0.0619 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 385 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.1554 -35.3724 -37.9104 REMARK 3 T TENSOR REMARK 3 T11: 0.3503 T22: 0.6907 REMARK 3 T33: 0.6598 T12: -0.0426 REMARK 3 T13: 0.0200 T23: -0.0897 REMARK 3 L TENSOR REMARK 3 L11: 4.0833 L22: 2.0267 REMARK 3 L33: 9.3586 L12: 3.1712 REMARK 3 L13: -1.6654 L23: -6.7801 REMARK 3 S TENSOR REMARK 3 S11: 0.0823 S12: -0.4326 S13: -0.1619 REMARK 3 S21: 0.0580 S22: -0.9567 S23: -1.4726 REMARK 3 S31: -0.3909 S32: 1.4696 S33: 0.7703 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KFZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1300012905. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46569 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 34.077 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.194 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.36 REMARK 200 R MERGE FOR SHELL (I) : 0.72700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.160 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5ZS9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 50MM LITHIUM SULFATE, REMARK 280 50 % (V/V) PEG 200, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.86667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.73333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 85.73333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.86667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -85.73333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -2 REMARK 465 GLY A -1 REMARK 465 PHE A 406 REMARK 465 VAL A 407 REMARK 465 ASP A 408 REMARK 465 LEU A 409 REMARK 465 GLU A 410 REMARK 465 HIS A 411 REMARK 465 HIS A 412 REMARK 465 HIS A 413 REMARK 465 HIS A 414 REMARK 465 HIS A 415 REMARK 465 HIS A 416 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 14 75.10 -101.67 REMARK 500 GLN A 47 -37.30 -131.65 REMARK 500 TYR A 48 21.01 -142.65 REMARK 500 ARG A 54 -108.85 -129.08 REMARK 500 ILE A 116 -163.68 -128.34 REMARK 500 ILE A 125 -59.25 -124.96 REMARK 500 GLU A 252 -18.95 76.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C6P A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ZS9 RELATED DB: PDB DBREF 6KFZ A 1 406 UNP O32164 SUFS_BACSU 1 406 SEQADV 6KFZ MET A -2 UNP O32164 EXPRESSION TAG SEQADV 6KFZ GLY A -1 UNP O32164 EXPRESSION TAG SEQADV 6KFZ HIS A 0 UNP O32164 EXPRESSION TAG SEQADV 6KFZ VAL A 407 UNP O32164 EXPRESSION TAG SEQADV 6KFZ ASP A 408 UNP O32164 EXPRESSION TAG SEQADV 6KFZ LEU A 409 UNP O32164 EXPRESSION TAG SEQADV 6KFZ GLU A 410 UNP O32164 EXPRESSION TAG SEQADV 6KFZ HIS A 411 UNP O32164 EXPRESSION TAG SEQADV 6KFZ HIS A 412 UNP O32164 EXPRESSION TAG SEQADV 6KFZ HIS A 413 UNP O32164 EXPRESSION TAG SEQADV 6KFZ HIS A 414 UNP O32164 EXPRESSION TAG SEQADV 6KFZ HIS A 415 UNP O32164 EXPRESSION TAG SEQADV 6KFZ HIS A 416 UNP O32164 EXPRESSION TAG SEQRES 1 A 419 MET GLY HIS MET ASN ILE THR ASP ILE ARG GLU GLN PHE SEQRES 2 A 419 PRO ILE LEU HIS GLN GLN VAL ASN GLY HIS ASP LEU VAL SEQRES 3 A 419 TYR LEU ASP SER ALA ALA THR SER GLN LYS PRO ARG ALA SEQRES 4 A 419 VAL ILE GLU THR LEU ASP LYS TYR TYR ASN GLN TYR ASN SEQRES 5 A 419 SER ASN VAL HIS ARG GLY VAL HIS THR LEU GLY THR ARG SEQRES 6 A 419 ALA THR ASP GLY TYR GLU GLY ALA ARG GLU LYS VAL ARG SEQRES 7 A 419 LYS PHE ILE ASN ALA LYS SER MET ALA GLU ILE ILE PHE SEQRES 8 A 419 THR LYS GLY THR THR THR SER LEU ASN MET VAL ALA LEU SEQRES 9 A 419 SER TYR ALA ARG ALA ASN LEU LYS PRO GLY ASP GLU VAL SEQRES 10 A 419 VAL ILE THR TYR MET GLU HIS HIS ALA ASN ILE ILE PRO SEQRES 11 A 419 TRP GLN GLN ALA VAL LYS ALA THR GLY ALA THR LEU LYS SEQRES 12 A 419 TYR ILE PRO LEU GLN GLU ASP GLY THR ILE SER LEU GLU SEQRES 13 A 419 ASP VAL ARG GLU THR VAL THR SER ASN THR LYS ILE VAL SEQRES 14 A 419 ALA VAL SER HIS VAL SER ASN VAL LEU GLY THR VAL ASN SEQRES 15 A 419 PRO ILE LYS GLU MET ALA LYS ILE ALA HIS ASP ASN GLY SEQRES 16 A 419 ALA VAL ILE VAL VAL ASP GLY ALA GLN SER THR PRO HIS SEQRES 17 A 419 MET LYS ILE ASP VAL GLN ASP LEU ASP CYS ASP PHE PHE SEQRES 18 A 419 ALA LEU SER SER HIS LYS MET CYS GLY PRO THR GLY VAL SEQRES 19 A 419 GLY VAL LEU TYR GLY LYS LYS ALA LEU LEU GLU ASN MET SEQRES 20 A 419 GLU PRO ALA GLU PHE GLY GLY GLU MET ILE ASP PHE VAL SEQRES 21 A 419 GLY LEU TYR GLU SER THR TRP LYS GLU LEU PRO TRP LYS SEQRES 22 A 419 PHE GLU ALA GLY THR PRO ILE ILE ALA GLY ALA ILE GLY SEQRES 23 A 419 LEU GLY ALA ALA ILE ASP PHE LEU GLU GLU ILE GLY LEU SEQRES 24 A 419 ASP GLU ILE SER ARG HIS GLU HIS LYS LEU ALA ALA TYR SEQRES 25 A 419 ALA LEU GLU ARG PHE ARG GLN LEU ASP GLY VAL THR VAL SEQRES 26 A 419 TYR GLY PRO GLU GLU ARG ALA GLY LEU VAL THR PHE ASN SEQRES 27 A 419 LEU ASP ASP VAL HIS PRO HIS ASP VAL ALA THR VAL LEU SEQRES 28 A 419 ASP ALA GLU GLY ILE ALA VAL ARG ALA GLY HIS HIS CSS SEQRES 29 A 419 ALA GLN PRO LEU MET LYS TRP LEU ASP VAL THR ALA THR SEQRES 30 A 419 ALA ARG ALA SER PHE TYR LEU TYR ASN THR GLU GLU GLU SEQRES 31 A 419 ILE ASP LYS LEU VAL GLU ALA LEU GLN LYS THR LYS GLU SEQRES 32 A 419 TYR PHE THR ASN VAL PHE VAL ASP LEU GLU HIS HIS HIS SEQRES 33 A 419 HIS HIS HIS MODRES 6KFZ CSS A 361 CYS MODIFIED RESIDUE HET CSS A 361 7 HET C6P A 601 22 HET PEG A 602 7 HET PEG A 603 7 HET PEG A 604 7 HETNAM CSS S-MERCAPTOCYSTEINE HETNAM C6P N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN- HETNAM 2 C6P 4-YL}METHYL)-L-CYSTEINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN C6P 4-((1-CARBOXY-2-THIOL-ETHYLAMINO)-METHYL)-3-HYDROXY-2- HETSYN 2 C6P METHYL-5-PHOSPHONOOXYMETHYL-PYRIDINIUM FORMUL 1 CSS C3 H7 N O2 S2 FORMUL 2 C6P C11 H17 N2 O7 P S FORMUL 3 PEG 3(C4 H10 O3) FORMUL 6 HOH *210(H2 O) HELIX 1 AA1 ASN A 2 GLU A 8 1 7 HELIX 2 AA2 GLN A 9 HIS A 14 5 6 HELIX 3 AA3 PRO A 34 TYR A 48 1 15 HELIX 4 AA4 HIS A 57 ASN A 79 1 23 HELIX 5 AA5 SER A 82 ALA A 84 5 3 HELIX 6 AA6 GLY A 91 TYR A 103 1 13 HELIX 7 AA7 TYR A 103 LEU A 108 1 6 HELIX 8 AA8 HIS A 121 ASN A 124 5 4 HELIX 9 AA9 ILE A 125 GLY A 136 1 12 HELIX 10 AB1 SER A 151 VAL A 159 1 9 HELIX 11 AB2 PRO A 180 ASN A 191 1 12 HELIX 12 AB3 ASP A 209 ASP A 214 1 6 HELIX 13 AB4 HIS A 223 CYS A 226 5 4 HELIX 14 AB5 LYS A 237 MET A 244 1 8 HELIX 15 AB6 PRO A 268 GLU A 272 5 5 HELIX 16 AB7 ILE A 277 GLY A 295 1 19 HELIX 17 AB8 GLY A 295 GLN A 316 1 22 HELIX 18 AB9 HIS A 340 GLU A 351 1 12 HELIX 19 AC1 ALA A 362 LEU A 369 1 8 HELIX 20 AC2 THR A 384 VAL A 405 1 22 SHEET 1 AA1 2 GLN A 16 VAL A 17 0 SHEET 2 AA1 2 HIS A 20 ASP A 21 -1 O HIS A 20 N VAL A 17 SHEET 1 AA2 2 VAL A 23 TYR A 24 0 SHEET 2 AA2 2 ILE A 353 ALA A 354 1 O ALA A 354 N VAL A 23 SHEET 1 AA3 7 ILE A 86 THR A 89 0 SHEET 2 AA3 7 GLY A 232 GLY A 236 -1 O GLY A 232 N THR A 89 SHEET 3 AA3 7 PHE A 217 SER A 221 -1 N PHE A 218 O TYR A 235 SHEET 4 AA3 7 VAL A 194 ASP A 198 1 N VAL A 197 O PHE A 217 SHEET 5 AA3 7 THR A 163 SER A 169 1 N VAL A 166 O VAL A 196 SHEET 6 AA3 7 GLU A 113 THR A 117 1 N GLU A 113 O LYS A 164 SHEET 7 AA3 7 THR A 138 ILE A 142 1 O ILE A 142 N ILE A 116 SHEET 1 AA4 2 ILE A 254 VAL A 257 0 SHEET 2 AA4 2 SER A 262 TRP A 264 -1 O THR A 263 N ASP A 255 SHEET 1 AA5 4 VAL A 320 TYR A 323 0 SHEET 2 AA5 4 LEU A 331 LEU A 336 -1 O ASN A 335 N THR A 321 SHEET 3 AA5 4 THR A 374 SER A 378 -1 O ALA A 375 N PHE A 334 SHEET 4 AA5 4 ARG A 356 GLY A 358 -1 N ARG A 356 O ARG A 376 LINK C HIS A 360 N CSS A 361 1555 1555 1.34 LINK C CSS A 361 N ALA A 362 1555 1555 1.34 CISPEP 1 LEU A 267 PRO A 268 0 -1.09 SITE 1 AC1 17 ALA A 28 ALA A 29 ARG A 54 THR A 92 SITE 2 AC1 17 THR A 93 HIS A 121 ASN A 173 ASP A 198 SITE 3 AC1 17 GLN A 201 SER A 221 HIS A 223 LYS A 224 SITE 4 AC1 17 THR A 275 ARG A 356 ARG A 376 HOH A 773 SITE 5 AC1 17 HOH A 778 SITE 1 AC2 3 HIS A 53 LYS A 265 TRP A 269 SITE 1 AC3 5 THR A 4 ARG A 7 THR A 384 GLU A 386 SITE 2 AC3 5 HOH A 731 SITE 1 AC4 3 GLN A 9 PHE A 290 GLU A 293 CRYST1 92.800 92.800 128.600 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010776 0.006221 0.000000 0.00000 SCALE2 0.000000 0.012443 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007776 0.00000