data_6KIT # _entry.id 6KIT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6KIT WWPDB D_1300013088 # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 6KIR _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6KIT _pdbx_database_status.recvd_initial_deposition_date 2019-07-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Wu, B.X.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of mouse CXorf40A, Selenomethionine derivative' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Wu, B.X.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6KIT _cell.details ? _cell.formula_units_Z ? _cell.length_a 51.128 _cell.length_a_esd ? _cell.length_b 96.102 _cell.length_b_esd ? _cell.length_c 33.230 _cell.length_c_esd ? _cell.volume 163275.707 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein CXorf40 homolog' 18176.461 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 water nat water 18.015 159 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;S(MSE)KFPCLSFRQPYAGLILNGVKTLETRWRPLLSSVQKYTIAIHIAHKDWEDDEWQEVL(MSE)ERLG(MSE)TWTQ IQTLLQAGEKYGRGVIAGLIDIGETFQCPETLTAEEAVELETQAVLTNLQLKYLTQVSNPRWLLEPIPRKGGKDIFQVDI PEHLIPLEK ; _entity_poly.pdbx_seq_one_letter_code_can ;SMKFPCLSFRQPYAGLILNGVKTLETRWRPLLSSVQKYTIAIHIAHKDWEDDEWQEVLMERLGMTWTQIQTLLQAGEKYG RGVIAGLIDIGETFQCPETLTAEEAVELETQAVLTNLQLKYLTQVSNPRWLLEPIPRKGGKDIFQVDIPEHLIPLEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MSE n 1 3 LYS n 1 4 PHE n 1 5 PRO n 1 6 CYS n 1 7 LEU n 1 8 SER n 1 9 PHE n 1 10 ARG n 1 11 GLN n 1 12 PRO n 1 13 TYR n 1 14 ALA n 1 15 GLY n 1 16 LEU n 1 17 ILE n 1 18 LEU n 1 19 ASN n 1 20 GLY n 1 21 VAL n 1 22 LYS n 1 23 THR n 1 24 LEU n 1 25 GLU n 1 26 THR n 1 27 ARG n 1 28 TRP n 1 29 ARG n 1 30 PRO n 1 31 LEU n 1 32 LEU n 1 33 SER n 1 34 SER n 1 35 VAL n 1 36 GLN n 1 37 LYS n 1 38 TYR n 1 39 THR n 1 40 ILE n 1 41 ALA n 1 42 ILE n 1 43 HIS n 1 44 ILE n 1 45 ALA n 1 46 HIS n 1 47 LYS n 1 48 ASP n 1 49 TRP n 1 50 GLU n 1 51 ASP n 1 52 ASP n 1 53 GLU n 1 54 TRP n 1 55 GLN n 1 56 GLU n 1 57 VAL n 1 58 LEU n 1 59 MSE n 1 60 GLU n 1 61 ARG n 1 62 LEU n 1 63 GLY n 1 64 MSE n 1 65 THR n 1 66 TRP n 1 67 THR n 1 68 GLN n 1 69 ILE n 1 70 GLN n 1 71 THR n 1 72 LEU n 1 73 LEU n 1 74 GLN n 1 75 ALA n 1 76 GLY n 1 77 GLU n 1 78 LYS n 1 79 TYR n 1 80 GLY n 1 81 ARG n 1 82 GLY n 1 83 VAL n 1 84 ILE n 1 85 ALA n 1 86 GLY n 1 87 LEU n 1 88 ILE n 1 89 ASP n 1 90 ILE n 1 91 GLY n 1 92 GLU n 1 93 THR n 1 94 PHE n 1 95 GLN n 1 96 CYS n 1 97 PRO n 1 98 GLU n 1 99 THR n 1 100 LEU n 1 101 THR n 1 102 ALA n 1 103 GLU n 1 104 GLU n 1 105 ALA n 1 106 VAL n 1 107 GLU n 1 108 LEU n 1 109 GLU n 1 110 THR n 1 111 GLN n 1 112 ALA n 1 113 VAL n 1 114 LEU n 1 115 THR n 1 116 ASN n 1 117 LEU n 1 118 GLN n 1 119 LEU n 1 120 LYS n 1 121 TYR n 1 122 LEU n 1 123 THR n 1 124 GLN n 1 125 VAL n 1 126 SER n 1 127 ASN n 1 128 PRO n 1 129 ARG n 1 130 TRP n 1 131 LEU n 1 132 LEU n 1 133 GLU n 1 134 PRO n 1 135 ILE n 1 136 PRO n 1 137 ARG n 1 138 LYS n 1 139 GLY n 1 140 GLY n 1 141 LYS n 1 142 ASP n 1 143 ILE n 1 144 PHE n 1 145 GLN n 1 146 VAL n 1 147 ASP n 1 148 ILE n 1 149 PRO n 1 150 GLU n 1 151 HIS n 1 152 LEU n 1 153 ILE n 1 154 PRO n 1 155 LEU n 1 156 GLU n 1 157 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 157 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CX040_MOUSE _struct_ref.pdbx_db_accession Q9D1F3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKFPCLSFRQPYAGLILNGVKTLETRWRPLLSSVQKYTIAIHIAHKDWEDDEWQEVLMERLGMTWTQIQTLLQAGEKYGR GVIAGLIDIGETFQCPETLTAEEAVELETQAVLTNLQLKYLTQVSNPRWLLEPIPRKGGKDIFQVDIPEHLIPLEK ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6KIT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 157 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9D1F3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 156 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 156 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6KIT _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9D1F3 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6KIT _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES sodium pH 7.5, 2% v/v Polyethylene glycol 400, 2.0 M Ammonium sulfate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-07-08 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97623 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97623 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6KIT _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.57 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 23707 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.21 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? _reflns.pdbx_CC_star ? # _reflns_shell.d_res_high 1.57 _reflns_shell.d_res_low 1.63 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2320 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_CC_star ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6KIT _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.57 _refine.ls_d_res_low 30 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22436 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.81 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1851 _refine.ls_R_factor_R_free 0.2174 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1834 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1269 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 1443 _refine_hist.d_res_high 1.57 _refine_hist.d_res_low 30 # _struct.entry_id 6KIT _struct.title 'Structure of mouse CXorf40A, Selenomethionine derivative' _struct.pdbx_descriptor 'Uncharacterized protein CXorf40 homolog' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6KIT _struct_keywords.text 'PUA-like, ASCH domain, Chromosome X, mitochondria, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 12 ? ASN A 19 ? PRO A 11 ASN A 18 1 ? 8 HELX_P HELX_P2 AA2 PRO A 30 ? GLN A 36 ? PRO A 29 GLN A 35 5 ? 7 HELX_P HELX_P3 AA3 GLU A 53 ? ARG A 61 ? GLU A 52 ARG A 60 1 ? 9 HELX_P HELX_P4 AA4 THR A 65 ? GLU A 77 ? THR A 64 GLU A 76 1 ? 13 HELX_P HELX_P5 AA5 THR A 101 ? VAL A 113 ? THR A 100 VAL A 112 1 ? 13 HELX_P HELX_P6 AA6 PRO A 149 ? ILE A 153 ? PRO A 148 ILE A 152 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A SER 1 C ? ? ? 1_555 A MSE 2 N A ? A SER 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale both ? A SER 1 C ? ? ? 1_555 A MSE 2 N B ? A SER 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.320 ? covale3 covale both ? A MSE 2 C A ? ? 1_555 A LYS 3 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale both ? A MSE 2 C B ? ? 1_555 A LYS 3 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.312 ? covale5 covale both ? A LEU 58 C ? ? ? 1_555 A MSE 59 N ? ? A LEU 57 A MSE 58 1_555 ? ? ? ? ? ? ? 1.342 ? covale6 covale both ? A MSE 59 C ? ? ? 1_555 A GLU 60 N ? ? A MSE 58 A GLU 59 1_555 ? ? ? ? ? ? ? 1.333 ? covale7 covale both ? A GLY 63 C ? ? ? 1_555 A MSE 64 N ? ? A GLY 62 A MSE 63 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale both ? A MSE 64 C ? ? ? 1_555 A THR 65 N ? ? A MSE 63 A THR 64 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 11 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 10 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 12 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 11 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 8.66 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 24 ? ARG A 27 ? LEU A 23 ARG A 26 AA1 2 TYR A 121 ? PRO A 136 ? TYR A 120 PRO A 135 AA1 3 VAL A 83 ? GLN A 95 ? VAL A 82 GLN A 94 AA1 4 THR A 39 ? ASP A 48 ? THR A 38 ASP A 47 AA1 5 MSE A 2 ? GLN A 11 ? MSE A 1 GLN A 10 AA1 6 PHE A 144 ? ILE A 148 ? PHE A 143 ILE A 147 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 27 ? N ARG A 26 O TYR A 121 ? O TYR A 120 AA1 2 3 O GLN A 124 ? O GLN A 123 N GLY A 91 ? N GLY A 90 AA1 3 4 O ALA A 85 ? O ALA A 84 N ILE A 42 ? N ILE A 41 AA1 4 5 O ALA A 41 ? O ALA A 40 N PRO A 5 ? N PRO A 4 AA1 5 6 N MSE A 2 ? N MSE A 1 O ILE A 148 ? O ILE A 147 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 201 ? 10 'binding site for residue SO4 A 201' AC2 Software A SO4 202 ? 4 'binding site for residue SO4 A 202' AC3 Software A SO4 203 ? 4 'binding site for residue SO4 A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 PRO A 30 ? PRO A 29 . ? 1_555 ? 2 AC1 10 TYR A 121 ? TYR A 120 . ? 1_555 ? 3 AC1 10 ARG A 129 ? ARG A 128 . ? 1_554 ? 4 AC1 10 TRP A 130 ? TRP A 129 . ? 1_554 ? 5 AC1 10 HOH E . ? HOH A 330 . ? 1_554 ? 6 AC1 10 HOH E . ? HOH A 336 . ? 1_555 ? 7 AC1 10 HOH E . ? HOH A 353 . ? 1_555 ? 8 AC1 10 HOH E . ? HOH A 358 . ? 1_554 ? 9 AC1 10 HOH E . ? HOH A 375 . ? 1_555 ? 10 AC1 10 HOH E . ? HOH A 400 . ? 1_555 ? 11 AC2 4 ARG A 27 ? ARG A 26 . ? 1_555 ? 12 AC2 4 TRP A 28 ? TRP A 27 . ? 1_555 ? 13 AC2 4 ARG A 29 ? ARG A 28 . ? 1_555 ? 14 AC2 4 HOH E . ? HOH A 320 . ? 1_555 ? 15 AC3 4 ALA A 45 ? ALA A 44 . ? 1_555 ? 16 AC3 4 HIS A 46 ? HIS A 45 . ? 1_555 ? 17 AC3 4 LYS A 47 ? LYS A 46 . ? 1_555 ? 18 AC3 4 HOH E . ? HOH A 410 . ? 1_555 ? # _atom_sites.entry_id 6KIT _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.019559 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010406 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.030093 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 LYS 3 2 2 LYS LYS A . n A 1 4 PHE 4 3 3 PHE PHE A . n A 1 5 PRO 5 4 4 PRO PRO A . n A 1 6 CYS 6 5 5 CYS CYS A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 SER 8 7 7 SER SER A . n A 1 9 PHE 9 8 8 PHE PHE A . n A 1 10 ARG 10 9 9 ARG ARG A . n A 1 11 GLN 11 10 10 GLN GLN A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 TYR 13 12 12 TYR TYR A . n A 1 14 ALA 14 13 13 ALA ALA A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 ILE 17 16 16 ILE ILE A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 ASN 19 18 18 ASN ASN A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 LYS 22 21 21 LYS LYS A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 GLU 25 24 24 GLU GLU A . n A 1 26 THR 26 25 25 THR THR A . n A 1 27 ARG 27 26 26 ARG ARG A . n A 1 28 TRP 28 27 27 TRP TRP A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 PRO 30 29 29 PRO PRO A . n A 1 31 LEU 31 30 30 LEU LEU A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 SER 33 32 32 SER SER A . n A 1 34 SER 34 33 33 SER SER A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 GLN 36 35 35 GLN GLN A . n A 1 37 LYS 37 36 36 LYS LYS A . n A 1 38 TYR 38 37 37 TYR TYR A . n A 1 39 THR 39 38 38 THR THR A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 ALA 41 40 40 ALA ALA A . n A 1 42 ILE 42 41 41 ILE ILE A . n A 1 43 HIS 43 42 42 HIS HIS A . n A 1 44 ILE 44 43 43 ILE ILE A . n A 1 45 ALA 45 44 44 ALA ALA A . n A 1 46 HIS 46 45 45 HIS HIS A . n A 1 47 LYS 47 46 46 LYS LYS A . n A 1 48 ASP 48 47 47 ASP ASP A . n A 1 49 TRP 49 48 48 TRP TRP A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 ASP 51 50 50 ASP ASP A . n A 1 52 ASP 52 51 51 ASP ASP A . n A 1 53 GLU 53 52 52 GLU GLU A . n A 1 54 TRP 54 53 53 TRP TRP A . n A 1 55 GLN 55 54 54 GLN GLN A . n A 1 56 GLU 56 55 55 GLU GLU A . n A 1 57 VAL 57 56 56 VAL VAL A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 MSE 59 58 58 MSE MSE A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 ARG 61 60 60 ARG ARG A . n A 1 62 LEU 62 61 61 LEU LEU A . n A 1 63 GLY 63 62 62 GLY GLY A . n A 1 64 MSE 64 63 63 MSE MSE A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 TRP 66 65 65 TRP TRP A . n A 1 67 THR 67 66 66 THR THR A . n A 1 68 GLN 68 67 67 GLN GLN A . n A 1 69 ILE 69 68 68 ILE ILE A . n A 1 70 GLN 70 69 69 GLN GLN A . n A 1 71 THR 71 70 70 THR THR A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 GLN 74 73 73 GLN GLN A . n A 1 75 ALA 75 74 74 ALA ALA A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 LYS 78 77 77 LYS LYS A . n A 1 79 TYR 79 78 78 TYR TYR A . n A 1 80 GLY 80 79 79 GLY GLY A . n A 1 81 ARG 81 80 80 ARG ARG A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 ILE 84 83 83 ILE ILE A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 ILE 88 87 87 ILE ILE A . n A 1 89 ASP 89 88 88 ASP ASP A . n A 1 90 ILE 90 89 89 ILE ILE A . n A 1 91 GLY 91 90 90 GLY GLY A . n A 1 92 GLU 92 91 91 GLU GLU A . n A 1 93 THR 93 92 92 THR THR A . n A 1 94 PHE 94 93 93 PHE PHE A . n A 1 95 GLN 95 94 94 GLN GLN A . n A 1 96 CYS 96 95 95 CYS CYS A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 GLU 98 97 97 GLU GLU A . n A 1 99 THR 99 98 98 THR THR A . n A 1 100 LEU 100 99 99 LEU LEU A . n A 1 101 THR 101 100 100 THR THR A . n A 1 102 ALA 102 101 101 ALA ALA A . n A 1 103 GLU 103 102 102 GLU GLU A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 ALA 105 104 104 ALA ALA A . n A 1 106 VAL 106 105 105 VAL VAL A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 THR 110 109 109 THR THR A . n A 1 111 GLN 111 110 110 GLN GLN A . n A 1 112 ALA 112 111 111 ALA ALA A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 ASN 116 115 115 ASN ASN A . n A 1 117 LEU 117 116 116 LEU LEU A . n A 1 118 GLN 118 117 117 GLN GLN A . n A 1 119 LEU 119 118 118 LEU LEU A . n A 1 120 LYS 120 119 119 LYS LYS A . n A 1 121 TYR 121 120 120 TYR TYR A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 THR 123 122 122 THR THR A . n A 1 124 GLN 124 123 123 GLN GLN A . n A 1 125 VAL 125 124 124 VAL VAL A . n A 1 126 SER 126 125 125 SER SER A . n A 1 127 ASN 127 126 126 ASN ASN A . n A 1 128 PRO 128 127 127 PRO PRO A . n A 1 129 ARG 129 128 128 ARG ARG A . n A 1 130 TRP 130 129 129 TRP TRP A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 LEU 132 131 131 LEU LEU A . n A 1 133 GLU 133 132 132 GLU GLU A . n A 1 134 PRO 134 133 133 PRO PRO A . n A 1 135 ILE 135 134 134 ILE ILE A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 ARG 137 136 136 ARG ARG A . n A 1 138 LYS 138 137 137 LYS LYS A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 GLY 140 139 139 GLY GLY A . n A 1 141 LYS 141 140 140 LYS LYS A . n A 1 142 ASP 142 141 141 ASP ASP A . n A 1 143 ILE 143 142 142 ILE ILE A . n A 1 144 PHE 144 143 143 PHE PHE A . n A 1 145 GLN 145 144 144 GLN GLN A . n A 1 146 VAL 146 145 145 VAL VAL A . n A 1 147 ASP 147 146 146 ASP ASP A . n A 1 148 ILE 148 147 147 ILE ILE A . n A 1 149 PRO 149 148 148 PRO PRO A . n A 1 150 GLU 150 149 149 GLU GLU A . n A 1 151 HIS 151 150 150 HIS HIS A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 ILE 153 152 152 ILE ILE A . n A 1 154 PRO 154 153 153 PRO PRO A . n A 1 155 LEU 155 154 154 LEU LEU A . n A 1 156 GLU 156 155 155 GLU GLU A . n A 1 157 LYS 157 156 156 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 201 1 SO4 SO4 A . C 2 SO4 1 202 2 SO4 SO4 A . D 2 SO4 1 203 3 SO4 SO4 A . E 3 HOH 1 301 192 HOH HOH A . E 3 HOH 2 302 180 HOH HOH A . E 3 HOH 3 303 133 HOH HOH A . E 3 HOH 4 304 169 HOH HOH A . E 3 HOH 5 305 175 HOH HOH A . E 3 HOH 6 306 162 HOH HOH A . E 3 HOH 7 307 157 HOH HOH A . E 3 HOH 8 308 120 HOH HOH A . E 3 HOH 9 309 178 HOH HOH A . E 3 HOH 10 310 184 HOH HOH A . E 3 HOH 11 311 189 HOH HOH A . E 3 HOH 12 312 60 HOH HOH A . E 3 HOH 13 313 32 HOH HOH A . E 3 HOH 14 314 156 HOH HOH A . E 3 HOH 15 315 90 HOH HOH A . E 3 HOH 16 316 144 HOH HOH A . E 3 HOH 17 317 130 HOH HOH A . E 3 HOH 18 318 128 HOH HOH A . E 3 HOH 19 319 153 HOH HOH A . E 3 HOH 20 320 143 HOH HOH A . E 3 HOH 21 321 111 HOH HOH A . E 3 HOH 22 322 105 HOH HOH A . E 3 HOH 23 323 82 HOH HOH A . E 3 HOH 24 324 45 HOH HOH A . E 3 HOH 25 325 113 HOH HOH A . E 3 HOH 26 326 47 HOH HOH A . E 3 HOH 27 327 100 HOH HOH A . E 3 HOH 28 328 49 HOH HOH A . E 3 HOH 29 329 10 HOH HOH A . E 3 HOH 30 330 186 HOH HOH A . E 3 HOH 31 331 85 HOH HOH A . E 3 HOH 32 332 142 HOH HOH A . E 3 HOH 33 333 101 HOH HOH A . E 3 HOH 34 334 150 HOH HOH A . E 3 HOH 35 335 84 HOH HOH A . E 3 HOH 36 336 119 HOH HOH A . E 3 HOH 37 337 164 HOH HOH A . E 3 HOH 38 338 116 HOH HOH A . E 3 HOH 39 339 154 HOH HOH A . E 3 HOH 40 340 102 HOH HOH A . E 3 HOH 41 341 13 HOH HOH A . E 3 HOH 42 342 172 HOH HOH A . E 3 HOH 43 343 108 HOH HOH A . E 3 HOH 44 344 190 HOH HOH A . E 3 HOH 45 345 174 HOH HOH A . E 3 HOH 46 346 8 HOH HOH A . E 3 HOH 47 347 37 HOH HOH A . E 3 HOH 48 348 12 HOH HOH A . E 3 HOH 49 349 75 HOH HOH A . E 3 HOH 50 350 40 HOH HOH A . E 3 HOH 51 351 87 HOH HOH A . E 3 HOH 52 352 136 HOH HOH A . E 3 HOH 53 353 94 HOH HOH A . E 3 HOH 54 354 131 HOH HOH A . E 3 HOH 55 355 70 HOH HOH A . E 3 HOH 56 356 28 HOH HOH A . E 3 HOH 57 357 20 HOH HOH A . E 3 HOH 58 358 18 HOH HOH A . E 3 HOH 59 359 146 HOH HOH A . E 3 HOH 60 360 80 HOH HOH A . E 3 HOH 61 361 140 HOH HOH A . E 3 HOH 62 362 17 HOH HOH A . E 3 HOH 63 363 6 HOH HOH A . E 3 HOH 64 364 77 HOH HOH A . E 3 HOH 65 365 11 HOH HOH A . E 3 HOH 66 366 173 HOH HOH A . E 3 HOH 67 367 62 HOH HOH A . E 3 HOH 68 368 22 HOH HOH A . E 3 HOH 69 369 112 HOH HOH A . E 3 HOH 70 370 92 HOH HOH A . E 3 HOH 71 371 158 HOH HOH A . E 3 HOH 72 372 59 HOH HOH A . E 3 HOH 73 373 109 HOH HOH A . E 3 HOH 74 374 78 HOH HOH A . E 3 HOH 75 375 88 HOH HOH A . E 3 HOH 76 376 95 HOH HOH A . E 3 HOH 77 377 163 HOH HOH A . E 3 HOH 78 378 166 HOH HOH A . E 3 HOH 79 379 67 HOH HOH A . E 3 HOH 80 380 33 HOH HOH A . E 3 HOH 81 381 31 HOH HOH A . E 3 HOH 82 382 181 HOH HOH A . E 3 HOH 83 383 123 HOH HOH A . E 3 HOH 84 384 134 HOH HOH A . E 3 HOH 85 385 152 HOH HOH A . E 3 HOH 86 386 93 HOH HOH A . E 3 HOH 87 387 110 HOH HOH A . E 3 HOH 88 388 53 HOH HOH A . E 3 HOH 89 389 125 HOH HOH A . E 3 HOH 90 390 160 HOH HOH A . E 3 HOH 91 391 103 HOH HOH A . E 3 HOH 92 392 115 HOH HOH A . E 3 HOH 93 393 165 HOH HOH A . E 3 HOH 94 394 183 HOH HOH A . E 3 HOH 95 395 168 HOH HOH A . E 3 HOH 96 396 36 HOH HOH A . E 3 HOH 97 397 74 HOH HOH A . E 3 HOH 98 398 7 HOH HOH A . E 3 HOH 99 399 107 HOH HOH A . E 3 HOH 100 400 121 HOH HOH A . E 3 HOH 101 401 23 HOH HOH A . E 3 HOH 102 402 44 HOH HOH A . E 3 HOH 103 403 73 HOH HOH A . E 3 HOH 104 404 83 HOH HOH A . E 3 HOH 105 405 3 HOH HOH A . E 3 HOH 106 406 9 HOH HOH A . E 3 HOH 107 407 182 HOH HOH A . E 3 HOH 108 408 161 HOH HOH A . E 3 HOH 109 409 26 HOH HOH A . E 3 HOH 110 410 171 HOH HOH A . E 3 HOH 111 411 97 HOH HOH A . E 3 HOH 112 412 151 HOH HOH A . E 3 HOH 113 413 104 HOH HOH A . E 3 HOH 114 414 35 HOH HOH A . E 3 HOH 115 415 21 HOH HOH A . E 3 HOH 116 416 106 HOH HOH A . E 3 HOH 117 417 43 HOH HOH A . E 3 HOH 118 418 79 HOH HOH A . E 3 HOH 119 419 15 HOH HOH A . E 3 HOH 120 420 167 HOH HOH A . E 3 HOH 121 421 129 HOH HOH A . E 3 HOH 122 422 145 HOH HOH A . E 3 HOH 123 423 2 HOH HOH A . E 3 HOH 124 424 68 HOH HOH A . E 3 HOH 125 425 38 HOH HOH A . E 3 HOH 126 426 139 HOH HOH A . E 3 HOH 127 427 81 HOH HOH A . E 3 HOH 128 428 63 HOH HOH A . E 3 HOH 129 429 179 HOH HOH A . E 3 HOH 130 430 185 HOH HOH A . E 3 HOH 131 431 135 HOH HOH A . E 3 HOH 132 432 99 HOH HOH A . E 3 HOH 133 433 16 HOH HOH A . E 3 HOH 134 434 25 HOH HOH A . E 3 HOH 135 435 159 HOH HOH A . E 3 HOH 136 436 124 HOH HOH A . E 3 HOH 137 437 58 HOH HOH A . E 3 HOH 138 438 177 HOH HOH A . E 3 HOH 139 439 89 HOH HOH A . E 3 HOH 140 440 191 HOH HOH A . E 3 HOH 141 441 117 HOH HOH A . E 3 HOH 142 442 91 HOH HOH A . E 3 HOH 143 443 149 HOH HOH A . E 3 HOH 144 444 188 HOH HOH A . E 3 HOH 145 445 187 HOH HOH A . E 3 HOH 146 446 86 HOH HOH A . E 3 HOH 147 447 138 HOH HOH A . E 3 HOH 148 448 114 HOH HOH A . E 3 HOH 149 449 193 HOH HOH A . E 3 HOH 150 450 98 HOH HOH A . E 3 HOH 151 451 27 HOH HOH A . E 3 HOH 152 452 170 HOH HOH A . E 3 HOH 153 453 176 HOH HOH A . E 3 HOH 154 454 132 HOH HOH A . E 3 HOH 155 455 141 HOH HOH A . E 3 HOH 156 456 51 HOH HOH A . E 3 HOH 157 457 46 HOH HOH A . E 3 HOH 158 458 126 HOH HOH A . E 3 HOH 159 459 76 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET 'modified residue' 2 A MSE 59 A MSE 58 ? MET 'modified residue' 3 A MSE 64 A MSE 63 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 190 ? 1 MORE -15 ? 1 'SSA (A^2)' 8680 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 408 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-07-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXDE ? ? ? . 4 # _pdbx_entry_details.entry_id 6KIT _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 435 ? ? O A HOH 444 ? ? 2.13 2 1 O A HOH 318 ? ? O A HOH 394 ? ? 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 330 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 400 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_556 _pdbx_validate_symm_contact.dist 1.96 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 29 ? ? -77.10 42.38 2 1 LYS A 36 ? ? 90.07 -2.61 3 1 ASN A 115 ? ? 73.83 72.73 4 1 LEU A 118 ? ? 71.59 -2.39 5 1 ASP A 141 ? ? 53.86 -139.18 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.crystal_system orthorhombic _space_group.name_H-M_alt 'P 21 21 2' _space_group.IT_number 18 _space_group.name_Hall 'P 2 2ab' _space_group.id 1 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x+1/2,y+1/2,-z 4 -x,-y,z #