HEADER TRANSFERASE 22-JUL-19 6KJH TITLE FUNCTIONAL AND STRUCTURAL INSIGHTS INTO THE UNUSUAL OXYANION HOLE-LIKE TITLE 2 GEOMETRY IN MACROLACTIN ACYLTRANSFERASE SELECTIVE FOR DICARBOXYLIC TITLE 3 ACYL DONORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MLNI; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: JEOTGALIBACILLUS MARINUS; SOURCE 3 ORGANISM_TAXID: 86667; SOURCE 4 GENE: MLNI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ACYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.XIAO,D.SHENG,Y.FENG,W.LI REVDAT 4 22-NOV-23 6KJH 1 REMARK REVDAT 3 30-SEP-20 6KJH 1 JRNL REVDAT 2 02-SEP-20 6KJH 1 JRNL REVDAT 1 29-JUL-20 6KJH 0 JRNL AUTH F.XIAO,S.DONG,Y.LIU,Y.FENG,H.LI,C.H.YUN,Q.CUI,W.LI JRNL TITL STRUCTURAL BASIS OF SPECIFICITY FOR CARBOXYL-TERMINATED ACYL JRNL TITL 2 DONORS IN A BACTERIAL ACYLTRANSFERASE. JRNL REF J.AM.CHEM.SOC. V. 142 16031 2020 JRNL REFN ESSN 1520-5126 JRNL PMID 32803979 JRNL DOI 10.1021/JACS.0C07331 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 42481 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.2380 - 4.0487 1.00 3129 154 0.1658 0.1825 REMARK 3 2 4.0487 - 3.2137 1.00 2955 147 0.1427 0.1674 REMARK 3 3 3.2137 - 2.8074 1.00 2940 145 0.1610 0.1624 REMARK 3 4 2.8074 - 2.5508 1.00 2909 144 0.1545 0.2026 REMARK 3 5 2.5508 - 2.3679 1.00 2889 142 0.1508 0.1915 REMARK 3 6 2.3679 - 2.2283 1.00 2877 143 0.1748 0.1782 REMARK 3 7 2.2283 - 2.1167 1.00 2871 142 0.1519 0.1818 REMARK 3 8 2.1167 - 2.0246 1.00 2876 142 0.1539 0.1789 REMARK 3 9 2.0246 - 1.9466 1.00 2865 141 0.1605 0.1956 REMARK 3 10 1.9466 - 1.8794 1.00 2856 141 0.2407 0.2780 REMARK 3 11 1.8794 - 1.8207 1.00 2867 142 0.1833 0.2414 REMARK 3 12 1.8207 - 1.7686 1.00 2838 141 0.1779 0.1972 REMARK 3 13 1.7686 - 1.7221 0.99 2838 139 0.1916 0.2134 REMARK 3 14 1.7221 - 1.6800 0.97 2771 137 0.2196 0.2567 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8175 22.5683 71.1844 REMARK 3 T TENSOR REMARK 3 T11: 0.1474 T22: 0.1237 REMARK 3 T33: 0.1254 T12: 0.0100 REMARK 3 T13: 0.0110 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 3.3647 L22: 1.6389 REMARK 3 L33: 1.8461 L12: -0.7144 REMARK 3 L13: 1.3353 L23: -0.3882 REMARK 3 S TENSOR REMARK 3 S11: -0.1211 S12: -0.1024 S13: 0.2622 REMARK 3 S21: 0.0344 S22: 0.0204 S23: 0.0250 REMARK 3 S31: -0.1532 S32: -0.0682 S33: 0.0966 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4053 -4.8878 55.9949 REMARK 3 T TENSOR REMARK 3 T11: 0.1213 T22: 0.1449 REMARK 3 T33: 0.1334 T12: 0.0101 REMARK 3 T13: -0.0072 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 0.7798 L22: 1.0698 REMARK 3 L33: 0.8414 L12: -0.1916 REMARK 3 L13: -0.1559 L23: 0.2777 REMARK 3 S TENSOR REMARK 3 S11: 0.0341 S12: 0.1221 S13: -0.1080 REMARK 3 S21: -0.1408 S22: -0.0313 S23: 0.0176 REMARK 3 S31: 0.0481 S32: -0.0406 S33: 0.0010 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7532 -4.7622 43.7881 REMARK 3 T TENSOR REMARK 3 T11: 0.2155 T22: 0.3229 REMARK 3 T33: 0.1959 T12: 0.0347 REMARK 3 T13: -0.0530 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 7.5853 L22: 4.6557 REMARK 3 L33: 5.1459 L12: 0.5466 REMARK 3 L13: -1.4827 L23: 1.8177 REMARK 3 S TENSOR REMARK 3 S11: 0.0665 S12: 0.6125 S13: -0.0344 REMARK 3 S21: -0.4613 S22: -0.1485 S23: 0.2538 REMARK 3 S31: -0.1196 S32: -0.7980 S33: -0.0675 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9960 0.9434 59.3426 REMARK 3 T TENSOR REMARK 3 T11: 0.1193 T22: 0.1555 REMARK 3 T33: 0.1440 T12: 0.0015 REMARK 3 T13: -0.0149 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.9236 L22: 1.1193 REMARK 3 L33: 0.9377 L12: -0.3789 REMARK 3 L13: 0.0311 L23: 0.2547 REMARK 3 S TENSOR REMARK 3 S11: 0.0490 S12: 0.0599 S13: -0.0123 REMARK 3 S21: -0.0874 S22: -0.0619 S23: 0.1064 REMARK 3 S31: -0.0266 S32: -0.1473 S33: 0.0167 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.3331 -0.5667 69.2452 REMARK 3 T TENSOR REMARK 3 T11: 0.0984 T22: 0.0830 REMARK 3 T33: 0.0949 T12: -0.0077 REMARK 3 T13: 0.0045 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.9489 L22: 1.9594 REMARK 3 L33: 1.0847 L12: -1.0221 REMARK 3 L13: 0.4230 L23: -0.0244 REMARK 3 S TENSOR REMARK 3 S11: 0.0134 S12: -0.0705 S13: -0.0107 REMARK 3 S21: 0.1015 S22: 0.0120 S23: -0.0976 REMARK 3 S31: 0.0656 S32: 0.0245 S33: -0.0162 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.9846 5.6142 51.1636 REMARK 3 T TENSOR REMARK 3 T11: 0.1972 T22: 0.1862 REMARK 3 T33: 0.2575 T12: -0.0235 REMARK 3 T13: 0.0232 T23: 0.0549 REMARK 3 L TENSOR REMARK 3 L11: 1.4647 L22: 4.3348 REMARK 3 L33: 2.9268 L12: 0.4273 REMARK 3 L13: -0.5471 L23: -3.3611 REMARK 3 S TENSOR REMARK 3 S11: -0.0715 S12: 0.2341 S13: 0.4312 REMARK 3 S21: -0.1421 S22: -0.0333 S23: -0.4030 REMARK 3 S31: -0.2048 S32: 0.1326 S33: 0.1700 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 303 THROUGH 365 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0014 14.3309 64.9376 REMARK 3 T TENSOR REMARK 3 T11: 0.1164 T22: 0.1121 REMARK 3 T33: 0.1109 T12: -0.0067 REMARK 3 T13: 0.0010 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 2.4566 L22: 1.8845 REMARK 3 L33: 0.8074 L12: -0.3081 REMARK 3 L13: 0.0929 L23: 0.0414 REMARK 3 S TENSOR REMARK 3 S11: 0.0074 S12: 0.0824 S13: 0.0507 REMARK 3 S21: -0.0216 S22: -0.0072 S23: -0.0639 REMARK 3 S31: -0.0375 S32: 0.0160 S33: 0.0086 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KJH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1300013119. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42566 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 118.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : 0.15700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 1.01800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4IVI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M AMMONIUM SULFATE, 0.1 M BIS REMARK 280 -TRIS, PH 6.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 59.23800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 59.23800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 59.23800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 59.23800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 59.23800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.23800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 59.23800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.23800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 675 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 744 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 776 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 858 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 873 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 GLN A 3 REMARK 465 THR A 4 REMARK 465 ILE A 5 REMARK 465 SER A 6 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 465 HIS A 371 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 280 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 61 O HOH A 501 1.38 REMARK 500 O HOH A 795 O HOH A 832 1.82 REMARK 500 O HOH A 807 O HOH A 853 1.83 REMARK 500 O HOH A 653 O HOH A 798 1.85 REMARK 500 O HOH A 800 O HOH A 870 1.87 REMARK 500 O HOH A 739 O HOH A 841 1.95 REMARK 500 O HOH A 806 O HOH A 834 1.97 REMARK 500 O HOH A 724 O HOH A 821 1.98 REMARK 500 O HOH A 699 O HOH A 702 2.02 REMARK 500 O HOH A 712 O HOH A 746 2.04 REMARK 500 O HOH A 575 O HOH A 686 2.06 REMARK 500 NE2 GLN A 61 O HOH A 501 2.09 REMARK 500 O HOH A 686 O HOH A 778 2.12 REMARK 500 O HOH A 573 O HOH A 642 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 134 41.46 -106.74 REMARK 500 ILE A 192 -57.74 -127.99 REMARK 500 TYR A 231 20.50 -150.55 REMARK 500 LYS A 261 -120.56 48.95 REMARK 500 GLU A 294 151.77 -44.04 REMARK 500 ASP A 308 -133.37 53.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 DBREF1 6KJH A 1 363 UNP A0A0U1X4V6_9BACL DBREF2 6KJH A A0A0U1X4V6 13 375 SEQADV 6KJH MET A -19 UNP A0A0U1X4V INITIATING METHIONINE SEQADV 6KJH GLY A -18 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH SER A -17 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH SER A -16 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A -15 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A -14 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A -13 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A -12 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A -11 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A -10 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH SER A -9 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH SER A -8 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH GLY A -7 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH LEU A -6 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH VAL A -5 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH PRO A -4 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH ARG A -3 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH GLY A -2 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH SER A -1 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A 0 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH LEU A 364 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH GLU A 365 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A 366 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A 367 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A 368 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A 369 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A 370 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJH HIS A 371 UNP A0A0U1X4V EXPRESSION TAG SEQRES 1 A 391 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 391 LEU VAL PRO ARG GLY SER HIS MET LYS GLN THR ILE SER SEQRES 3 A 391 ASN PRO ALA PHE ASP MET LYS GLN ILE ASN ALA LEU ASN SEQRES 4 A 391 GLY HIS TYR GLN THR MET ILE ASP ASN GLY ASP LEU GLN SEQRES 5 A 391 CYS ALA SER TYR MET MET SER ARG GLY GLY GLU VAL PHE SEQRES 6 A 391 ALA ALA GLU SER LEU GLY GLU PHE THR GLY GLY GLN LYS SEQRES 7 A 391 GLU LYS GLN THR PHE GLN LEU ASP THR ILE ARG GLU ILE SEQRES 8 A 391 GLY SER LEU THR LYS VAL PHE THR ALA VAL ALA VAL MET SEQRES 9 A 391 GLN LEU VAL GLU LYS GLY LEU LEU ASP LEU LYS MET PRO SEQRES 10 A 391 VAL LYS LEU ILE LEU PRO ALA PHE ASP LYS PRO GLY PHE SEQRES 11 A 391 GLY GLU ILE LYS ILE LEU HIS LEU LEU THR HIS THR ALA SEQRES 12 A 391 GLY LEU SER PHE GLU LEU ASP ILE GLN LYS ALA GLU GLY SEQRES 13 A 391 ILE ASP LEU THR ASN GLU GLU GLU TRP ILE ASN TYR LEU SEQRES 14 A 391 VAL SER THR PRO LEU GLU TYR GLY VAL ASP GLU ALA TRP SEQRES 15 A 391 ASN TYR SER ARG THR GLY PHE VAL ILE LEU GLY ILE ILE SEQRES 16 A 391 ILE SER LYS VAL THR GLY VAL SER TYR GLU GLN TYR VAL SEQRES 17 A 391 THR LYS HIS ILE ILE GLU ALA LEU GLY LEU GLU ARG THR SEQRES 18 A 391 TYR PHE TYR VAL PRO ASP THR LEU LYS GLU GLU VAL CYS SEQRES 19 A 391 VAL ILE SER GLU HIS GLU CYS VAL GLN LEU GLU LYS SER SEQRES 20 A 391 HIS HIS PRO TYR PHE PRO ASN LYS ALA THR SER GLY LEU SEQRES 21 A 391 TYR SER SER LEU ARG ASP ILE TRP LYS LEU ALA GLU MET SEQRES 22 A 391 PHE ARG ASN LYS GLY ARG LEU LYS ASP LYS LYS LEU LEU SEQRES 23 A 391 GLY ARG LYS THR VAL GLU ALA MET LEU ARG ASN GLN ILE SEQRES 24 A 391 LYS PRO GLY LEU PRO PHE TYR PHE PHE GLY ALA PRO ARG SEQRES 25 A 391 GLU GLU GLY GLY PHE GLY LEU GLY ILE ASN LEU TRP PRO SEQRES 26 A 391 ALA GLY ASP HIS TYR PHE MET THR GLU GLY THR PHE SER SEQRES 27 A 391 HIS LEU GLY MET GLY TRP CYS GLY MET PHE SER ASP PRO SEQRES 28 A 391 ALA GLU ASP PHE THR TYR VAL PHE PHE THR PRO ILE SER SEQRES 29 A 391 GLU PHE HIS PRO HIS ALA VAL LEU THR PRO LEU ASN ILE SEQRES 30 A 391 VAL TRP ALA GLY ILE GLU LEU GLU HIS HIS HIS HIS HIS SEQRES 31 A 391 HIS HET SO4 A 401 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *389(H2 O) HELIX 1 AA1 MET A 12 ASN A 28 1 17 HELIX 2 AA2 LEU A 74 LYS A 89 1 16 HELIX 3 AA3 PRO A 97 ILE A 101 5 5 HELIX 4 AA4 LEU A 102 ASP A 106 5 5 HELIX 5 AA5 GLY A 109 ILE A 113 5 5 HELIX 6 AA6 LYS A 114 THR A 120 1 7 HELIX 7 AA7 ASP A 130 ALA A 134 5 5 HELIX 8 AA8 ASN A 141 SER A 151 1 11 HELIX 9 AA9 SER A 165 GLY A 181 1 17 HELIX 10 AB1 SER A 183 ILE A 192 1 10 HELIX 11 AB2 PRO A 206 VAL A 213 5 8 HELIX 12 AB3 SER A 217 GLU A 225 1 9 HELIX 13 AB4 SER A 243 ASN A 256 1 14 HELIX 14 AB5 GLY A 267 ARG A 276 1 10 HELIX 15 AB6 PRO A 331 GLU A 333 5 3 HELIX 16 AB7 HIS A 347 LEU A 352 1 6 HELIX 17 AB8 LEU A 352 ALA A 360 1 9 SHEET 1 AA1 6 GLN A 61 THR A 62 0 SHEET 2 AA1 6 GLU A 43 PHE A 53 -1 N PHE A 53 O GLN A 61 SHEET 3 AA1 6 CYS A 33 ARG A 40 -1 N ALA A 34 O LEU A 50 SHEET 4 AA1 6 PHE A 335 PHE A 340 -1 O VAL A 338 N MET A 37 SHEET 5 AA1 6 CYS A 325 ASP A 330 -1 N ASP A 330 O PHE A 335 SHEET 6 AA1 6 PHE A 317 GLY A 321 -1 N GLY A 321 O CYS A 325 SHEET 1 AA2 2 ARG A 69 GLU A 70 0 SHEET 2 AA2 2 TYR A 241 SER A 242 -1 O SER A 242 N ARG A 69 SHEET 1 AA3 3 TRP A 162 ASN A 163 0 SHEET 2 AA3 3 PHE A 285 PHE A 287 1 O TYR A 286 N TRP A 162 SHEET 3 AA3 3 ALA A 290 ARG A 292 -1 O ALA A 290 N PHE A 287 SHEET 1 AA4 2 ARG A 259 LEU A 260 0 SHEET 2 AA4 2 LYS A 263 LYS A 264 -1 O LYS A 263 N LEU A 260 CISPEP 1 TRP A 304 PRO A 305 0 2.93 CISPEP 2 GLY A 323 TRP A 324 0 -0.32 SITE 1 AC1 9 SER A 73 LYS A 76 PHE A 127 TYR A 164 SITE 2 AC1 9 ARG A 166 THR A 237 MET A 322 HOH A 560 SITE 3 AC1 9 HOH A 596 CRYST1 118.476 118.476 51.874 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008441 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008441 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019277 0.00000