HEADER TRANSFERASE 23-JUL-19 6KJQ TITLE FUNCTIONAL AND STRUCTURAL INSIGHTS INTO THE UNUSUAL OXYANION HOLE-LIKE TITLE 2 GEOMETRY IN MACROLACTIN ACYLTRANSFERASE SELECTIVE FOR DICARBOXYLIC TITLE 3 ACYL DONORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MLNI; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: JEOTGALIBACILLUS MARINUS; SOURCE 3 ORGANISM_TAXID: 86667; SOURCE 4 GENE: MLNI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ACYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.XIAO,S.DONG,Y.FENG,W.LI REVDAT 4 22-NOV-23 6KJQ 1 REMARK REVDAT 3 30-SEP-20 6KJQ 1 JRNL REVDAT 2 02-SEP-20 6KJQ 1 JRNL REVDAT 1 29-JUL-20 6KJQ 0 JRNL AUTH F.XIAO,S.DONG,Y.LIU,Y.FENG,H.LI,C.H.YUN,Q.CUI,W.LI JRNL TITL STRUCTURAL BASIS OF SPECIFICITY FOR CARBOXYL-TERMINATED ACYL JRNL TITL 2 DONORS IN A BACTERIAL ACYLTRANSFERASE. JRNL REF J.AM.CHEM.SOC. V. 142 16031 2020 JRNL REFN ESSN 1520-5126 JRNL PMID 32803979 JRNL DOI 10.1021/JACS.0C07331 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 14330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8730 - 5.0607 1.00 1456 162 0.1790 0.2297 REMARK 3 2 5.0607 - 4.0178 1.00 1373 153 0.1474 0.1780 REMARK 3 3 4.0178 - 3.5102 1.00 1345 149 0.1588 0.1946 REMARK 3 4 3.5102 - 3.1893 0.99 1328 148 0.1678 0.2442 REMARK 3 5 3.1893 - 2.9608 0.97 1266 140 0.1951 0.2401 REMARK 3 6 2.9608 - 2.7863 0.94 1243 138 0.1996 0.2689 REMARK 3 7 2.7863 - 2.6467 0.93 1212 135 0.2038 0.2848 REMARK 3 8 2.6467 - 2.5315 0.93 1229 137 0.2024 0.3292 REMARK 3 9 2.5315 - 2.4341 0.93 1232 136 0.2321 0.3303 REMARK 3 10 2.4341 - 2.3501 0.93 1213 135 0.2665 0.3577 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1783 -32.9844 19.9807 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.2649 REMARK 3 T33: 0.3727 T12: 0.0130 REMARK 3 T13: -0.0614 T23: -0.0724 REMARK 3 L TENSOR REMARK 3 L11: 4.5999 L22: 7.9237 REMARK 3 L33: 5.0757 L12: 2.5047 REMARK 3 L13: -1.0090 L23: -2.5617 REMARK 3 S TENSOR REMARK 3 S11: 0.1556 S12: -0.4036 S13: 0.2035 REMARK 3 S21: 0.5022 S22: -0.4009 S23: -0.9275 REMARK 3 S31: -0.1845 S32: 0.6793 S33: 0.0970 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4833 -23.0835 18.1464 REMARK 3 T TENSOR REMARK 3 T11: 0.2212 T22: 0.2103 REMARK 3 T33: 0.3969 T12: 0.0129 REMARK 3 T13: -0.0201 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 4.0685 L22: 5.7505 REMARK 3 L33: 4.6732 L12: 1.9150 REMARK 3 L13: -1.2432 L23: -1.0644 REMARK 3 S TENSOR REMARK 3 S11: 0.2928 S12: 0.1080 S13: 0.6358 REMARK 3 S21: 0.2488 S22: -0.1302 S23: -0.3982 REMARK 3 S31: -0.5421 S32: 0.2341 S33: -0.0967 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0576 -24.0230 13.4090 REMARK 3 T TENSOR REMARK 3 T11: 0.2246 T22: 0.0993 REMARK 3 T33: 0.2583 T12: 0.0209 REMARK 3 T13: -0.0061 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 6.1792 L22: 0.7189 REMARK 3 L33: 1.7654 L12: 0.5886 REMARK 3 L13: 1.6977 L23: 0.0167 REMARK 3 S TENSOR REMARK 3 S11: -0.2482 S12: -0.0867 S13: 0.5813 REMARK 3 S21: 0.0729 S22: 0.1700 S23: 0.1461 REMARK 3 S31: -0.1773 S32: 0.1072 S33: 0.0865 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1964 -26.5761 -4.6592 REMARK 3 T TENSOR REMARK 3 T11: 0.2214 T22: 0.2228 REMARK 3 T33: 0.2183 T12: 0.0056 REMARK 3 T13: -0.0518 T23: 0.0634 REMARK 3 L TENSOR REMARK 3 L11: 2.5753 L22: 3.3430 REMARK 3 L33: 4.2934 L12: -1.2798 REMARK 3 L13: -0.1284 L23: -0.0168 REMARK 3 S TENSOR REMARK 3 S11: 0.1103 S12: 0.4050 S13: 0.3867 REMARK 3 S21: -0.3351 S22: -0.1731 S23: -0.0853 REMARK 3 S31: -0.2611 S32: -0.0404 S33: 0.0447 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4425 -14.4002 11.7982 REMARK 3 T TENSOR REMARK 3 T11: 0.3594 T22: 0.1657 REMARK 3 T33: 0.3444 T12: -0.0204 REMARK 3 T13: 0.0253 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 3.0380 L22: 2.9914 REMARK 3 L33: 2.1099 L12: 0.4755 REMARK 3 L13: 0.8889 L23: 0.0785 REMARK 3 S TENSOR REMARK 3 S11: -0.0936 S12: 0.0544 S13: 0.6336 REMARK 3 S21: -0.2588 S22: -0.0143 S23: 0.0263 REMARK 3 S31: -0.5665 S32: 0.2026 S33: 0.0841 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2131 -34.4836 11.6305 REMARK 3 T TENSOR REMARK 3 T11: 0.0826 T22: 0.1085 REMARK 3 T33: 0.1696 T12: 0.0333 REMARK 3 T13: -0.0372 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 2.6941 L22: 2.6794 REMARK 3 L33: 3.1780 L12: 0.6575 REMARK 3 L13: 0.0813 L23: -0.1360 REMARK 3 S TENSOR REMARK 3 S11: -0.0159 S12: -0.0216 S13: -0.0124 REMARK 3 S21: 0.1183 S22: 0.0389 S23: -0.0135 REMARK 3 S31: 0.2137 S32: 0.0685 S33: 0.0367 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 303 THROUGH 365 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4148 -36.0316 12.1506 REMARK 3 T TENSOR REMARK 3 T11: 0.1037 T22: 0.1351 REMARK 3 T33: 0.2248 T12: 0.0221 REMARK 3 T13: 0.0364 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 2.4029 L22: 4.5060 REMARK 3 L33: 3.0822 L12: -0.7770 REMARK 3 L13: 1.4077 L23: -0.7105 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: 0.1215 S13: 0.0881 REMARK 3 S21: -0.1881 S22: -0.0308 S23: -0.0899 REMARK 3 S31: -0.0652 S32: -0.0246 S33: 0.0299 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KJQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-19. REMARK 100 THE DEPOSITION ID IS D_1300013138. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14362 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 46.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.51900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6KJH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M AMMONIUM SULFATE, 0.1 M BIS REMARK 280 -TRIS, PH 6.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 58.12000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 58.12000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 58.12000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 58.12000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 58.12000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.12000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 58.12000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.12000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 510 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 GLN A 3 REMARK 465 THR A 4 REMARK 465 ILE A 5 REMARK 465 SER A 6 REMARK 465 HIS A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 465 HIS A 371 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 GLN A 57 CG CD OE1 NE2 REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 GLN A 132 CG CD OE1 NE2 REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 GLU A 135 CG CD OE1 OE2 REMARK 470 HIS A 219 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 223 CG CD OE1 NE2 REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 GLU A 314 CG CD OE1 OE2 REMARK 470 GLU A 365 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 37 119.17 -163.54 REMARK 500 THR A 54 77.05 -101.73 REMARK 500 GLN A 57 -126.58 59.72 REMARK 500 GLU A 59 71.81 52.86 REMARK 500 ILE A 192 -58.74 -130.45 REMARK 500 LYS A 235 49.26 -106.38 REMARK 500 SER A 238 146.49 -171.01 REMARK 500 LYS A 261 -110.14 57.61 REMARK 500 ASP A 308 -131.86 54.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D9F A 401 DBREF1 6KJQ A 1 363 UNP A0A0U1X4V6_9BACL DBREF2 6KJQ A A0A0U1X4V6 13 375 SEQADV 6KJQ MET A -19 UNP A0A0U1X4V INITIATING METHIONINE SEQADV 6KJQ GLY A -18 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ SER A -17 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ SER A -16 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A -15 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A -14 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A -13 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A -12 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A -11 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A -10 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ SER A -9 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ SER A -8 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ GLY A -7 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ LEU A -6 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ VAL A -5 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ PRO A -4 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ ARG A -3 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ GLY A -2 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ SER A -1 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A 0 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ ALA A 73 UNP A0A0U1X4V SER 85 ENGINEERED MUTATION SEQADV 6KJQ ALA A 76 UNP A0A0U1X4V LYS 88 ENGINEERED MUTATION SEQADV 6KJQ LEU A 364 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ GLU A 365 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A 366 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A 367 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A 368 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A 369 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A 370 UNP A0A0U1X4V EXPRESSION TAG SEQADV 6KJQ HIS A 371 UNP A0A0U1X4V EXPRESSION TAG SEQRES 1 A 391 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 391 LEU VAL PRO ARG GLY SER HIS MET LYS GLN THR ILE SER SEQRES 3 A 391 ASN PRO ALA PHE ASP MET LYS GLN ILE ASN ALA LEU ASN SEQRES 4 A 391 GLY HIS TYR GLN THR MET ILE ASP ASN GLY ASP LEU GLN SEQRES 5 A 391 CYS ALA SER TYR MET MET SER ARG GLY GLY GLU VAL PHE SEQRES 6 A 391 ALA ALA GLU SER LEU GLY GLU PHE THR GLY GLY GLN LYS SEQRES 7 A 391 GLU LYS GLN THR PHE GLN LEU ASP THR ILE ARG GLU ILE SEQRES 8 A 391 GLY ALA LEU THR ALA VAL PHE THR ALA VAL ALA VAL MET SEQRES 9 A 391 GLN LEU VAL GLU LYS GLY LEU LEU ASP LEU LYS MET PRO SEQRES 10 A 391 VAL LYS LEU ILE LEU PRO ALA PHE ASP LYS PRO GLY PHE SEQRES 11 A 391 GLY GLU ILE LYS ILE LEU HIS LEU LEU THR HIS THR ALA SEQRES 12 A 391 GLY LEU SER PHE GLU LEU ASP ILE GLN LYS ALA GLU GLY SEQRES 13 A 391 ILE ASP LEU THR ASN GLU GLU GLU TRP ILE ASN TYR LEU SEQRES 14 A 391 VAL SER THR PRO LEU GLU TYR GLY VAL ASP GLU ALA TRP SEQRES 15 A 391 ASN TYR SER ARG THR GLY PHE VAL ILE LEU GLY ILE ILE SEQRES 16 A 391 ILE SER LYS VAL THR GLY VAL SER TYR GLU GLN TYR VAL SEQRES 17 A 391 THR LYS HIS ILE ILE GLU ALA LEU GLY LEU GLU ARG THR SEQRES 18 A 391 TYR PHE TYR VAL PRO ASP THR LEU LYS GLU GLU VAL CYS SEQRES 19 A 391 VAL ILE SER GLU HIS GLU CYS VAL GLN LEU GLU LYS SER SEQRES 20 A 391 HIS HIS PRO TYR PHE PRO ASN LYS ALA THR SER GLY LEU SEQRES 21 A 391 TYR SER SER LEU ARG ASP ILE TRP LYS LEU ALA GLU MET SEQRES 22 A 391 PHE ARG ASN LYS GLY ARG LEU LYS ASP LYS LYS LEU LEU SEQRES 23 A 391 GLY ARG LYS THR VAL GLU ALA MET LEU ARG ASN GLN ILE SEQRES 24 A 391 LYS PRO GLY LEU PRO PHE TYR PHE PHE GLY ALA PRO ARG SEQRES 25 A 391 GLU GLU GLY GLY PHE GLY LEU GLY ILE ASN LEU TRP PRO SEQRES 26 A 391 ALA GLY ASP HIS TYR PHE MET THR GLU GLY THR PHE SER SEQRES 27 A 391 HIS LEU GLY MET GLY TRP CYS GLY MET PHE SER ASP PRO SEQRES 28 A 391 ALA GLU ASP PHE THR TYR VAL PHE PHE THR PRO ILE SER SEQRES 29 A 391 GLU PHE HIS PRO HIS ALA VAL LEU THR PRO LEU ASN ILE SEQRES 30 A 391 VAL TRP ALA GLY ILE GLU LEU GLU HIS HIS HIS HIS HIS SEQRES 31 A 391 HIS HET D9F A 401 29 HETNAM D9F (3~{Z},5~{E},8~{S},9~{E},11~{E},14~{S},16~{R},17~{Z}, HETNAM 2 D9F 19~{E},24~{R})-24-METHYL-8,14,16-TRIS(OXIDANYL)-1- HETNAM 3 D9F OXACYCLOTETRACOSA-3,5,9,11,17,19-HEXAEN-2-ONE FORMUL 2 D9F C24 H34 O5 FORMUL 3 HOH *116(H2 O) HELIX 1 AA1 MET A 12 ASN A 28 1 17 HELIX 2 AA2 LEU A 74 LYS A 89 1 16 HELIX 3 AA3 PRO A 97 ILE A 101 5 5 HELIX 4 AA4 LEU A 102 ASP A 106 5 5 HELIX 5 AA5 GLY A 109 ILE A 113 5 5 HELIX 6 AA6 LYS A 114 THR A 120 1 7 HELIX 7 AA7 ASN A 141 VAL A 150 1 10 HELIX 8 AA8 SER A 165 GLY A 181 1 17 HELIX 9 AA9 SER A 183 ILE A 192 1 10 HELIX 10 AB1 ILE A 192 GLY A 197 1 6 HELIX 11 AB2 PRO A 206 VAL A 213 5 8 HELIX 12 AB3 SER A 217 LEU A 224 1 8 HELIX 13 AB4 SER A 243 ASN A 256 1 14 HELIX 14 AB5 GLY A 267 ARG A 276 1 10 HELIX 15 AB6 HIS A 347 LEU A 352 1 6 HELIX 16 AB7 LEU A 352 ALA A 360 1 9 SHEET 1 AA1 6 GLN A 61 THR A 62 0 SHEET 2 AA1 6 GLU A 43 PHE A 53 -1 N PHE A 53 O GLN A 61 SHEET 3 AA1 6 CYS A 33 ARG A 40 -1 N ALA A 34 O LEU A 50 SHEET 4 AA1 6 PHE A 335 PHE A 340 -1 O PHE A 340 N SER A 35 SHEET 5 AA1 6 CYS A 325 ASP A 330 -1 N ASP A 330 O PHE A 335 SHEET 6 AA1 6 PHE A 317 GLY A 321 -1 N GLY A 321 O CYS A 325 SHEET 1 AA2 2 ARG A 69 GLU A 70 0 SHEET 2 AA2 2 TYR A 241 SER A 242 -1 O SER A 242 N ARG A 69 SHEET 1 AA3 3 TRP A 162 ASN A 163 0 SHEET 2 AA3 3 PHE A 285 PHE A 287 1 O TYR A 286 N TRP A 162 SHEET 3 AA3 3 ALA A 290 ARG A 292 -1 O ALA A 290 N PHE A 287 SHEET 1 AA4 2 ARG A 259 LEU A 260 0 SHEET 2 AA4 2 LYS A 263 LYS A 264 -1 O LYS A 263 N LEU A 260 CISPEP 1 TRP A 304 PRO A 305 0 2.57 CISPEP 2 GLY A 323 TRP A 324 0 2.98 SITE 1 AC1 13 ALA A 73 PHE A 127 TRP A 162 TYR A 164 SITE 2 AC1 13 PHE A 287 PHE A 288 ARG A 292 ASN A 302 SITE 3 AC1 13 LEU A 320 MET A 322 TRP A 324 PHE A 346 SITE 4 AC1 13 HOH A 573 CRYST1 116.240 116.240 50.250 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008603 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008603 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019901 0.00000