HEADER OXIDOREDUCTASE 30-JUL-19 6KLJ TITLE CRYSTAL STRUCTURE OF THE ZEA MAYS LACCASE 3 COMPLEXED WITH CONIFERYL COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACCASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BENZENEDIOL:OXYGEN OXIDOREDUCTASE,DIPHENOL OXIDASE,URISHIOL COMPND 5 OXIDASE; COMPND 6 EC: 1.10.3.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_COMMON: MAIZE; SOURCE 4 ORGANISM_TAXID: 4577; SOURCE 5 GENE: LAC3; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.XIE,Z.C.LIU,G.G.WANG REVDAT 5 22-NOV-23 6KLJ 1 HETSYN REVDAT 4 29-JUL-20 6KLJ 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 01-APR-20 6KLJ 1 JRNL REVDAT 2 11-MAR-20 6KLJ 1 JRNL REVDAT 1 01-JAN-20 6KLJ 0 JRNL AUTH T.XIE,Z.LIU,G.WANG JRNL TITL STRUCTURAL BASIS FOR MONOLIGNOL OXIDATION BY A MAIZE JRNL TITL 2 LACCASE. JRNL REF NAT.PLANTS V. 6 231 2020 JRNL REFN ESSN 2055-0278 JRNL PMID 32123349 JRNL DOI 10.1038/S41477-020-0595-5 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 52704 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 2601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9440 - 5.3227 0.99 2881 162 0.1706 0.2035 REMARK 3 2 5.3227 - 4.2286 1.00 2753 129 0.1247 0.1419 REMARK 3 3 4.2286 - 3.6952 1.00 2677 151 0.1325 0.1674 REMARK 3 4 3.6952 - 3.3578 1.00 2653 146 0.1601 0.2101 REMARK 3 5 3.3578 - 3.1174 1.00 2653 136 0.1753 0.2323 REMARK 3 6 3.1174 - 2.9338 1.00 2634 150 0.1802 0.2156 REMARK 3 7 2.9338 - 2.7870 1.00 2645 124 0.1763 0.2391 REMARK 3 8 2.7870 - 2.6657 1.00 2632 121 0.1762 0.2170 REMARK 3 9 2.6657 - 2.5632 1.00 2625 136 0.1776 0.1854 REMARK 3 10 2.5632 - 2.4748 1.00 2627 130 0.1721 0.2355 REMARK 3 11 2.4748 - 2.3974 1.00 2602 145 0.1778 0.2276 REMARK 3 12 2.3974 - 2.3289 1.00 2572 150 0.1775 0.2189 REMARK 3 13 2.3289 - 2.2676 1.00 2638 114 0.1737 0.2249 REMARK 3 14 2.2676 - 2.2123 1.00 2600 137 0.1768 0.2064 REMARK 3 15 2.2123 - 2.1620 1.00 2584 143 0.1756 0.2445 REMARK 3 16 2.1620 - 2.1160 1.00 2593 123 0.1804 0.2067 REMARK 3 17 2.1160 - 2.0737 1.00 2556 157 0.1821 0.2313 REMARK 3 18 2.0737 - 2.0346 1.00 2588 128 0.1858 0.2400 REMARK 3 19 2.0346 - 1.9983 1.00 2590 119 0.1859 0.2354 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4592 REMARK 3 ANGLE : 0.889 6292 REMARK 3 CHIRALITY : 0.059 699 REMARK 3 PLANARITY : 0.006 819 REMARK 3 DIHEDRAL : 3.663 2672 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KLJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1300013245. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52763 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.998 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 15.30 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.44700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1AOZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% OF PEG 3350, 0.2 M (NH4)2SO4 AND REMARK 280 0.1 M BIS-TRIS,PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.39500 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 138.79000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 104.09250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 173.48750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.69750 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 69.39500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 138.79000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 173.48750 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 104.09250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 34.69750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 764 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ARG A 2 REMARK 465 ASN A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 95 -88.93 -133.01 REMARK 500 LEU A 101 -162.43 -126.52 REMARK 500 GLU A 108 -134.99 51.03 REMARK 500 THR A 207 -38.69 -131.88 REMARK 500 PRO A 397 44.86 -88.01 REMARK 500 LYS A 474 -42.60 -138.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 602 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 59 NE2 REMARK 620 2 HIS A 454 NE2 176.6 REMARK 620 3 HOH A 947 O 91.2 92.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 604 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 61 ND1 REMARK 620 2 HIS A 104 NE2 127.9 REMARK 620 3 HIS A 515 NE2 107.1 115.8 REMARK 620 4 OXY A 616 O1 111.0 95.2 93.3 REMARK 620 5 OXY A 616 O2 134.4 86.1 75.1 26.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 106 NE2 REMARK 620 2 HIS A 456 NE2 100.0 REMARK 620 3 HIS A 513 NE2 115.1 107.7 REMARK 620 4 OXY A 616 O1 110.3 111.4 111.7 REMARK 620 5 OXY A 616 O2 94.7 144.4 94.8 33.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 451 ND1 REMARK 620 2 CYS A 514 SG 132.1 REMARK 620 3 HIS A 519 ND1 102.9 124.5 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6KLG RELATED DB: PDB DBREF 6KLJ A 1 550 UNP Q2PAJ1 Q2PAJ1_MAIZE 35 584 SEQRES 1 A 550 SER ARG ASN THR HIS TYR ASP PHE VAL ILE THR GLU THR SEQRES 2 A 550 LYS VAL THR ARG LEU CYS HIS GLU LYS THR ILE LEU ALA SEQRES 3 A 550 VAL ASN GLY GLN PHE PRO GLY PRO THR ILE TYR ALA ARG SEQRES 4 A 550 LYS ASP ASP VAL VAL ILE VAL ASN VAL TYR ASN GLN GLY SEQRES 5 A 550 TYR LYS ASN ILE THR LEU HIS TRP HIS GLY VAL ASP GLN SEQRES 6 A 550 PRO ARG ASN PRO TRP SER ASP GLY PRO GLU TYR ILE THR SEQRES 7 A 550 GLN CYS PRO ILE GLN PRO GLY ALA ASN PHE THR TYR LYS SEQRES 8 A 550 ILE ILE PHE THR GLU GLU GLU GLY THR LEU TRP TRP HIS SEQRES 9 A 550 ALA HIS SER GLU PHE ASP ARG ALA THR VAL HIS GLY ALA SEQRES 10 A 550 ILE VAL ILE HIS PRO LYS ARG GLY THR VAL TYR PRO TYR SEQRES 11 A 550 PRO LYS PRO HIS LYS GLU MET PRO ILE ILE LEU GLY GLU SEQRES 12 A 550 TRP TRP ASN ALA ASP VAL GLU GLN ILE LEU LEU GLU SER SEQRES 13 A 550 GLN ARG THR GLY GLY ASP VAL ASN ILE SER ASP ALA ASN SEQRES 14 A 550 THR ILE ASN GLY GLN PRO GLY ASP PHE ALA PRO CYS SER SEQRES 15 A 550 LYS GLU ASP THR PHE LYS MET SER VAL GLU HIS GLY LYS SEQRES 16 A 550 THR TYR LEU LEU ARG VAL ILE ASN ALA GLY LEU THR ASN SEQRES 17 A 550 GLU MET PHE PHE ALA VAL ALA GLY HIS ARG LEU THR VAL SEQRES 18 A 550 VAL GLY THR ASP GLY ARG TYR LEU ARG PRO PHE THR VAL SEQRES 19 A 550 ASP TYR ILE LEU ILE SER PRO GLY GLN THR MET ASN MET SEQRES 20 A 550 LEU LEU GLU ALA ASN CYS ALA THR ASP GLY SER ALA ASN SEQRES 21 A 550 SER ARG TYR TYR MET ALA ALA ARG PRO PHE PHE THR ASN SEQRES 22 A 550 THR ALA VAL ASN VAL ASP ASP LYS ASN THR THR ALA ILE SEQRES 23 A 550 VAL GLU TYR THR ASP ALA PRO PRO SER ALA SER ALA GLY SEQRES 24 A 550 PRO PRO ASP SER PRO ASP LEU PRO ALA MET ASP ASP ILE SEQRES 25 A 550 ALA ALA ALA THR ALA TYR THR ALA GLN LEU ARG SER LEU SEQRES 26 A 550 VAL THR LYS GLU HIS PRO ILE ASP VAL PRO MET GLU VAL SEQRES 27 A 550 ASP GLU HIS MET LEU VAL THR ILE SER VAL ASN THR ILE SEQRES 28 A 550 PRO CYS GLU PRO ASN LYS THR CYS ALA GLY PRO GLY ASN SEQRES 29 A 550 ASN ARG LEU ALA ALA SER LEU ASN ASN VAL SER PHE MET SEQRES 30 A 550 ASN PRO THR ILE ASP ILE LEU ASP ALA TYR TYR ASP SER SEQRES 31 A 550 ILE SER GLY VAL TYR GLU PRO ASP PHE PRO ASN LYS PRO SEQRES 32 A 550 PRO PHE PHE PHE ASN PHE THR ALA PRO ASN PRO PRO GLN SEQRES 33 A 550 ASP LEU TRP PHE THR LYS ARG GLY THR LYS VAL LYS VAL SEQRES 34 A 550 VAL GLU TYR GLY THR ILE LEU GLU VAL VAL PHE GLN ASP SEQRES 35 A 550 THR ALA ILE LEU GLY ALA GLU SER HIS PRO MET HIS LEU SEQRES 36 A 550 HIS GLY PHE SER PHE TYR VAL VAL GLY ARG GLY PHE GLY SEQRES 37 A 550 ASN PHE ASP LYS ASP LYS ASP PRO ALA THR TYR ASN LEU SEQRES 38 A 550 VAL ASP PRO PRO TYR GLN ASN THR VAL SER VAL PRO THR SEQRES 39 A 550 GLY GLY TRP ALA ALA MET ARG PHE ARG ALA ALA ASN PRO SEQRES 40 A 550 GLY VAL TRP PHE MET HIS CYS HIS PHE ASP ARG HIS THR SEQRES 41 A 550 VAL TRP GLY MET ASP THR VAL PHE ILE VAL LYS ASN GLY SEQRES 42 A 550 LYS GLY PRO ASP ALA GLN MET MET PRO ARG PRO PRO ASN SEQRES 43 A 550 MET PRO LYS CYS HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET CU A 601 1 HET CU A 602 1 HET CU A 603 1 HET CU A 604 1 HET NAG A 605 14 HET NAG A 606 14 HET NAG A 609 14 HET NAG A 610 14 HET NAG A 613 14 HET CIY A 614 13 HET GOL A 615 6 HET OXY A 616 2 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CU COPPER (II) ION HETNAM CIY (2E)-3-(4-HYDROXY-3-METHOXYPHENYL)PROP-2-ENAL HETNAM GOL GLYCEROL HETNAM OXY OXYGEN MOLECULE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN CIY CONIFERALDEHYDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 9(C8 H15 N O6) FORMUL 4 CU 4(CU 2+) FORMUL 13 CIY C10 H10 O3 FORMUL 14 GOL C3 H8 O3 FORMUL 15 OXY O2 FORMUL 16 HOH *507(H2 O) HELIX 1 AA1 ASN A 68 ASP A 72 5 5 HELIX 2 AA2 PHE A 109 THR A 113 5 5 HELIX 3 AA3 ASP A 148 GLY A 160 1 13 HELIX 4 AA4 SER A 182 THR A 186 5 5 HELIX 5 AA5 PRO A 293 ALA A 298 5 6 HELIX 6 AA6 ASP A 311 ALA A 320 1 10 HELIX 7 AA7 GLY A 361 ASN A 365 5 5 HELIX 8 AA8 ASP A 382 SER A 390 1 9 HELIX 9 AA9 PRO A 415 PHE A 420 5 6 HELIX 10 AB1 LYS A 474 TYR A 479 5 6 HELIX 11 AB2 PHE A 516 GLY A 523 1 8 HELIX 12 AB3 GLY A 535 GLN A 539 5 5 SHEET 1 AA1 4 HIS A 20 VAL A 27 0 SHEET 2 AA1 4 HIS A 5 ARG A 17 -1 N THR A 11 O ALA A 26 SHEET 3 AA1 4 VAL A 43 ASN A 50 1 O ASN A 47 N PHE A 8 SHEET 4 AA1 4 ASN A 87 ILE A 93 -1 O ILE A 92 N VAL A 44 SHEET 1 AA2 4 ILE A 36 ARG A 39 0 SHEET 2 AA2 4 HIS A 115 HIS A 121 1 O VAL A 119 N ILE A 36 SHEET 3 AA2 4 GLY A 99 ALA A 105 -1 N GLY A 99 O ILE A 120 SHEET 4 AA2 4 LEU A 58 HIS A 61 -1 N HIS A 59 O HIS A 104 SHEET 1 AA3 6 ALA A 168 ILE A 171 0 SHEET 2 AA3 6 LYS A 135 TRP A 144 -1 N GLY A 142 O THR A 170 SHEET 3 AA3 6 THR A 196 ASN A 203 1 O ILE A 202 N LEU A 141 SHEET 4 AA3 6 THR A 244 GLU A 250 -1 O LEU A 249 N TYR A 197 SHEET 5 AA3 6 LEU A 219 THR A 224 -1 N VAL A 222 O ASN A 246 SHEET 6 AA3 6 ARG A 227 VAL A 234 -1 O VAL A 234 N LEU A 219 SHEET 1 AA4 5 LYS A 188 VAL A 191 0 SHEET 2 AA4 5 THR A 283 TYR A 289 1 O GLU A 288 N VAL A 191 SHEET 3 AA4 5 ARG A 262 PHE A 270 -1 N TYR A 263 O VAL A 287 SHEET 4 AA4 5 GLU A 209 VAL A 214 -1 N PHE A 211 O ARG A 268 SHEET 5 AA4 5 ILE A 237 ILE A 239 -1 O ILE A 239 N MET A 210 SHEET 1 AA5 6 ARG A 366 LEU A 371 0 SHEET 2 AA5 6 GLU A 340 ILE A 351 -1 N ASN A 349 O ALA A 368 SHEET 3 AA5 6 THR A 434 ASP A 442 1 O VAL A 439 N VAL A 344 SHEET 4 AA5 6 GLY A 496 ALA A 504 -1 O ALA A 504 N THR A 434 SHEET 5 AA5 6 PHE A 460 PHE A 467 -1 N GLY A 464 O ALA A 499 SHEET 6 AA5 6 TYR A 486 GLN A 487 -1 O GLN A 487 N PHE A 460 SHEET 1 AA6 2 VAL A 374 PHE A 376 0 SHEET 2 AA6 2 LYS A 422 GLY A 424 1 O LYS A 422 N SER A 375 SHEET 1 AA7 5 VAL A 427 VAL A 430 0 SHEET 2 AA7 5 ASP A 525 VAL A 530 1 O VAL A 527 N LYS A 428 SHEET 3 AA7 5 GLY A 508 CYS A 514 -1 N TRP A 510 O PHE A 528 SHEET 4 AA7 5 PRO A 452 LEU A 455 -1 N HIS A 454 O HIS A 513 SHEET 5 AA7 5 THR A 489 SER A 491 -1 O VAL A 490 N MET A 453 SSBOND 1 CYS A 19 CYS A 181 1555 1555 2.04 SSBOND 2 CYS A 80 CYS A 550 1555 1555 2.04 SSBOND 3 CYS A 353 CYS A 359 1555 1555 2.05 LINK ND2 ASN A 55 C1 NAG B 1 1555 1555 1.43 LINK ND2 ASN A 87 C1 NAG A 605 1555 1555 1.45 LINK ND2 ASN A 164 C1 NAG A 609 1555 1555 1.44 LINK ND2 ASN A 282 C1 NAG A 606 1555 1555 1.45 LINK ND2 ASN A 356 C1 NAG A 610 1555 1555 1.43 LINK ND2 ASN A 373 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 408 C1 NAG A 613 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK NE2 HIS A 59 CU CU A 602 1555 1555 2.03 LINK ND1 HIS A 61 CU CU A 604 1555 1555 1.99 LINK NE2 HIS A 104 CU CU A 604 1555 1555 2.19 LINK NE2 HIS A 106 CU CU A 603 1555 1555 2.16 LINK ND1 HIS A 451 CU CU A 601 1555 1555 2.11 LINK NE2 HIS A 454 CU CU A 602 1555 1555 1.95 LINK NE2 HIS A 456 CU CU A 603 1555 1555 2.05 LINK NE2 HIS A 513 CU CU A 603 1555 1555 2.06 LINK SG CYS A 514 CU CU A 601 1555 1555 2.21 LINK NE2 HIS A 515 CU CU A 604 1555 1555 2.12 LINK ND1 HIS A 519 CU CU A 601 1555 1555 2.06 LINK CU CU A 602 O HOH A 947 1555 1555 2.45 LINK CU CU A 603 O1 OXY A 616 1555 1555 2.14 LINK CU CU A 603 O2 OXY A 616 1555 1555 2.10 LINK CU CU A 604 O1 OXY A 616 1555 1555 2.23 LINK CU CU A 604 O2 OXY A 616 1555 1555 2.69 CISPEP 1 PHE A 31 PRO A 32 0 -11.04 CRYST1 111.848 111.848 208.185 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008941 0.005162 0.000000 0.00000 SCALE2 0.000000 0.010324 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004803 0.00000