HEADER HYDROLASE 15-AUG-19 6KPM TITLE CRYSTAL STRUCTURE OF ENDO-BETA-N-ACETYLGLUCOSAMINIDASE FROM CORDYCEPS TITLE 2 MILITARIS IN COMPLEX WITH L-FUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORDYCEPS MILITARIS CM01; SOURCE 3 ORGANISM_COMMON: CATERPILLAR FUNGUS; SOURCE 4 ORGANISM_TAXID: 983644; SOURCE 5 STRAIN: CM01; SOURCE 6 GENE: CCM_08020; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VARIANT: CODONPLUS (DE3)-RIL; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET-32B KEYWDS TIM BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.SEKI,T.ARAKAWA,C.YAMADA,K.TAKEGAWA,S.FUSHINOBU REVDAT 4 29-JUL-20 6KPM 1 COMPND REMARK HETNAM SITE REVDAT 3 20-NOV-19 6KPM 1 JRNL REVDAT 2 09-OCT-19 6KPM 1 JRNL REVDAT 1 02-OCT-19 6KPM 0 JRNL AUTH H.SEKI,Y.HUANG,T.ARAKAWA,C.YAMADA,T.KINOSHITA,S.IWAMOTO, JRNL AUTH 2 Y.HIGUCHI,K.TAKEGAWA,S.FUSHINOBU JRNL TITL STRUCTURAL BASIS FOR THE SPECIFIC CLEAVAGE OF JRNL TITL 2 CORE-FUCOSYLATEDN-GLYCANS BY JRNL TITL 3 ENDO-BETA-N-ACETYLGLUCOSAMINIDASE FROM THE FUNGUSCORDYCEPS JRNL TITL 4 MILITARIS. JRNL REF J.BIOL.CHEM. V. 294 17143 2019 JRNL REFN ESSN 1083-351X JRNL PMID 31548313 JRNL DOI 10.1074/JBC.RA119.010842 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.HUANG,Y.HIGUCHI,T.KINOSHITA,A.MITANI,Y.ESHIMA,K.TAKEGAWA REMARK 1 TITL CHARACTERIZATION OF NOVEL ENDO-BETA-N-ACETYLGLUCOSAMINIDASES REMARK 1 TITL 2 FROM SPHINGOBACTERIUM SPECIES, BEAUVERIA BASSIANA AND REMARK 1 TITL 3 CORDYCEPS MILITARIS THAT SPECIFICALLY HYDROLYZE REMARK 1 TITL 4 FUCOSE-CONTAINING OLIGOSACCHARIDES AND HUMAN IGG. REMARK 1 REF SCI REP V. 8 246 2018 REMARK 1 REFN ESSN 2045-2322 REMARK 1 PMID 29321565 REMARK 1 DOI 10.1038/S41598-017-17467-Y REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1887 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2575 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2280 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 278 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.567 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2368 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2128 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3212 ; 1.599 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4948 ; 1.464 ; 1.584 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 294 ; 6.931 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;35.729 ;23.455 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 373 ;12.046 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;12.492 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 317 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2636 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 495 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6KPM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1300013439. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37466 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.84100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CHES-NAOH (PH 8.6) AND 20 % REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.95333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 20.97667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.46500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 10.48833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.44167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 19 REMARK 465 SER A 20 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 528 O HOH A 613 3565 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 27 -163.58 -121.41 REMARK 500 THR A 32 -32.77 -134.34 REMARK 500 THR A 99 -55.62 -122.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 778 DISTANCE = 6.68 ANGSTROMS DBREF 6KPM A 20 315 UNP G3JPF7 G3JPF7_CORMM 20 315 SEQADV 6KPM MET A 19 UNP G3JPF7 INITIATING METHIONINE SEQADV 6KPM HIS A 316 UNP G3JPF7 EXPRESSION TAG SEQADV 6KPM HIS A 317 UNP G3JPF7 EXPRESSION TAG SEQADV 6KPM HIS A 318 UNP G3JPF7 EXPRESSION TAG SEQADV 6KPM HIS A 319 UNP G3JPF7 EXPRESSION TAG SEQADV 6KPM HIS A 320 UNP G3JPF7 EXPRESSION TAG SEQADV 6KPM HIS A 321 UNP G3JPF7 EXPRESSION TAG SEQRES 1 A 303 MET SER SER SER VAL CYS PRO SER ASP ASN THR HIS ALA SEQRES 2 A 303 THR GLY ALA ALA LEU GLN LYS ILE LEU ASP TYR LYS LYS SEQRES 3 A 303 GLY ASP HIS GLN ILE MET ALA GLY TYR PHE ARG SER TRP SEQRES 4 A 303 ARG ASP THR ALA SER GLY THR GLY ASN LYS VAL SER MET SEQRES 5 A 303 LEU ASP LEU PRO ASP CYS LEU ASP ILE ALA PHE VAL PHE SEQRES 6 A 303 PRO GLU GLY ASP GLU THR ALA SER PHE TRP THR THR LEU SEQRES 7 A 303 LYS ASP THR TYR VAL PRO ALA LEU HIS GLY ARG GLY ILE SEQRES 8 A 303 LYS VAL VAL ARG SER VAL GLY ILE ALA GLN LEU ILE ASN SEQRES 9 A 303 THR ALA TRP ASP ASN THR PRO ALA GLY TRP GLN GLY LEU SEQRES 10 A 303 ALA ASP ALA LEU MET LYS THR VAL ASP ASP TYR GLY LEU SEQRES 11 A 303 ASP GLY LEU ASP ILE ASP VAL GLU GLN SER LEU ASN ALA SEQRES 12 A 303 ASN GLN LEU LYS GLN ALA THR GLY VAL PHE ASN ALA LEU SEQRES 13 A 303 ALA LYS LYS LEU GLY PRO LYS SER GLY THR GLY LYS LEU SEQRES 14 A 303 LEU ILE PHE ASP THR ASN MET ASP GLY THR GLN PRO LEU SEQRES 15 A 303 TRP ARG ASN VAL TYR PRO THR ILE SER TYR VAL LEU ILE SEQRES 16 A 303 GLN SER TYR GLY ARG SER ILE SER GLY LEU GLN THR THR SEQRES 17 A 303 TYR ASN SER PHE LYS SER TYR ILE SER SER LYS GLN TYR SEQRES 18 A 303 LEU ILE GLY PHE SER PHE TYR GLU GLU ASN GLY THR ASN SEQRES 19 A 303 TRP GLY ASP THR THR THR PRO MET THR SER SER ARG ALA SEQRES 20 A 303 TRP GLN TYR ALA LYS TRP GLN PRO SER GLY ALA THR LYS SEQRES 21 A 303 GLY GLY ILE PHE SER TYR ALA ILE ASP ARG ASP GLY VAL SEQRES 22 A 303 ALA ILE GLY ASP ASN THR LEU LYS THR THR ASP PHE THR SEQRES 23 A 303 TRP THR ARG GLN LEU ILE GLY ALA MET ASN PRO HIS HIS SEQRES 24 A 303 HIS HIS HIS HIS HET FUC A 401 11 HET PGE A 402 10 HET PEG A 403 7 HET PEG A 404 7 HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM PGE TRIETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 FUC C6 H12 O5 FORMUL 3 PGE C6 H14 O4 FORMUL 4 PEG 2(C4 H10 O3) FORMUL 6 HOH *278(H2 O) HELIX 1 AA1 GLY A 33 GLY A 45 1 13 HELIX 2 AA2 TRP A 57 ASP A 59 5 3 HELIX 3 AA3 SER A 69 LEU A 73 5 5 HELIX 4 AA4 THR A 89 THR A 99 1 11 HELIX 5 AA5 THR A 99 ARG A 107 1 9 HELIX 6 AA6 ALA A 118 ILE A 121 5 4 HELIX 7 AA7 THR A 128 ASP A 145 1 18 HELIX 8 AA8 ASN A 160 ALA A 175 1 16 HELIX 9 AA9 GLN A 198 TYR A 205 1 8 HELIX 10 AB1 PRO A 206 ILE A 208 5 3 HELIX 11 AB2 SER A 219 SER A 221 5 3 HELIX 12 AB3 GLY A 222 LYS A 231 1 10 HELIX 13 AB4 SER A 232 ILE A 234 5 3 HELIX 14 AB5 SER A 235 LYS A 237 5 3 HELIX 15 AB6 PRO A 259 SER A 262 5 4 HELIX 16 AB7 SER A 263 TRP A 271 1 9 HELIX 17 AB8 ALA A 285 ASP A 289 5 5 HELIX 18 AB9 PHE A 303 ASN A 314 1 12 SHEET 1 AA1 9 ILE A 49 ARG A 55 0 SHEET 2 AA1 9 ILE A 79 PHE A 83 1 O PHE A 81 N GLY A 52 SHEET 3 AA1 9 LYS A 110 GLY A 116 1 O LYS A 110 N ALA A 80 SHEET 4 AA1 9 GLY A 150 VAL A 155 1 O ASP A 152 N ARG A 113 SHEET 5 AA1 9 LEU A 187 THR A 192 1 O ASP A 191 N VAL A 155 SHEET 6 AA1 9 TYR A 210 GLN A 214 1 O LEU A 212 N PHE A 190 SHEET 7 AA1 9 TYR A 239 SER A 244 1 O LEU A 240 N ILE A 213 SHEET 8 AA1 9 GLY A 280 TYR A 284 1 O TYR A 284 N PHE A 243 SHEET 9 AA1 9 ILE A 49 ARG A 55 1 N TYR A 53 O SER A 283 SSBOND 1 CYS A 24 CYS A 76 1555 1555 2.03 CISPEP 1 THR A 258 PRO A 259 0 2.31 CRYST1 105.809 105.809 62.930 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009451 0.005457 0.000000 0.00000 SCALE2 0.000000 0.010913 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015891 0.00000