HEADER OXIDOREDUCTASE 22-AUG-19 6KRR TITLE PEROXIREDOXIN FROM AEROPYRUM PERNIX K1 (APPRX) 0CYS W210A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXIREDOXIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: THIOREDOXIN PEROXIDASE,APTPX; COMPND 5 EC: 1.11.1.15; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROPYRUM PERNIX (STRAIN ATCC 700893 / DSM SOURCE 3 11879 / JCM 9820 / NBRC 100138 / K1); SOURCE 4 ORGANISM_TAXID: 272557; SOURCE 5 STRAIN: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1; SOURCE 6 GENE: APE_2278; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PEROXIREDOXIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.HIMIYAMA,T.NAKAMURA REVDAT 2 22-NOV-23 6KRR 1 REMARK REVDAT 1 01-JUL-20 6KRR 0 JRNL AUTH T.HIMIYAMA,T.NAKAMURA JRNL TITL DISASSEMBLY OF THE RING-TYPE DECAMERIC STRUCTURE OF JRNL TITL 2 PEROXIREDOXIN FROM AEROPYRUM PERNIX K1 BY AMINO ACID JRNL TITL 3 MUTATION. JRNL REF PROTEIN SCI. V. 29 1138 2020 JRNL REFN ESSN 1469-896X JRNL PMID 32022337 JRNL DOI 10.1002/PRO.3837 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 103442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : 0.2320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7856 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KRR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1300013534. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 103512 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.40800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2E2G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM PHOSPHATE MONOBASIC, REMARK 280 0.1 M TRIS PH 8.5, 50% V/V (+/-)-2-METHYL-2,4-PENTANEDIOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 49.24800 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 97.02800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 49.24800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 97.02800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 301 O HOH D 369 1.85 REMARK 500 O HOH D 340 O HOH D 368 1.93 REMARK 500 O HOH B 337 O HOH B 379 1.97 REMARK 500 O HOH A 303 O HOH B 318 1.98 REMARK 500 OE1 GLU C 14 NZ LYS C 25 2.05 REMARK 500 O HOH A 326 O HOH A 372 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 379 O HOH B 379 2555 1.87 REMARK 500 O HOH D 335 O HOH D 335 2655 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 112 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG D 126 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 15 147.30 -170.11 REMARK 500 GLU A 201 53.97 -90.21 REMARK 500 GLN A 204 -14.36 84.77 REMARK 500 ASP A 209 172.83 179.30 REMARK 500 GLN B 204 57.32 -112.51 REMARK 500 GLU B 243 45.65 -94.46 REMARK 500 VAL C 125 -168.79 -71.72 REMARK 500 GLN C 204 44.90 -97.87 REMARK 500 SER D 202 173.64 170.77 REMARK 500 GLN D 204 -3.01 73.34 REMARK 500 GLU D 244 26.07 -140.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6KRK RELATED DB: PDB DBREF 6KRR A 2 245 UNP Q9Y9L0 TDXH_AERPE 2 245 DBREF 6KRR B 2 245 UNP Q9Y9L0 TDXH_AERPE 2 245 DBREF 6KRR C 2 245 UNP Q9Y9L0 TDXH_AERPE 2 245 DBREF 6KRR D 2 245 UNP Q9Y9L0 TDXH_AERPE 2 245 SEQADV 6KRR SER A 50 UNP Q9Y9L0 CYS 50 ENGINEERED MUTATION SEQADV 6KRR SER A 207 UNP Q9Y9L0 CYS 207 ENGINEERED MUTATION SEQADV 6KRR ALA A 210 UNP Q9Y9L0 TRP 210 ENGINEERED MUTATION SEQADV 6KRR SER A 213 UNP Q9Y9L0 CYS 213 ENGINEERED MUTATION SEQADV 6KRR SER B 50 UNP Q9Y9L0 CYS 50 ENGINEERED MUTATION SEQADV 6KRR SER B 207 UNP Q9Y9L0 CYS 207 ENGINEERED MUTATION SEQADV 6KRR ALA B 210 UNP Q9Y9L0 TRP 210 ENGINEERED MUTATION SEQADV 6KRR SER B 213 UNP Q9Y9L0 CYS 213 ENGINEERED MUTATION SEQADV 6KRR SER C 50 UNP Q9Y9L0 CYS 50 ENGINEERED MUTATION SEQADV 6KRR SER C 207 UNP Q9Y9L0 CYS 207 ENGINEERED MUTATION SEQADV 6KRR ALA C 210 UNP Q9Y9L0 TRP 210 ENGINEERED MUTATION SEQADV 6KRR SER C 213 UNP Q9Y9L0 CYS 213 ENGINEERED MUTATION SEQADV 6KRR SER D 50 UNP Q9Y9L0 CYS 50 ENGINEERED MUTATION SEQADV 6KRR SER D 207 UNP Q9Y9L0 CYS 207 ENGINEERED MUTATION SEQADV 6KRR ALA D 210 UNP Q9Y9L0 TRP 210 ENGINEERED MUTATION SEQADV 6KRR SER D 213 UNP Q9Y9L0 CYS 213 ENGINEERED MUTATION SEQRES 1 A 244 PRO GLY SER ILE PRO LEU ILE GLY GLU ARG PHE PRO GLU SEQRES 2 A 244 MET GLU VAL THR THR ASP HIS GLY VAL ILE LYS LEU PRO SEQRES 3 A 244 ASP HIS TYR VAL SER GLN GLY LYS TRP PHE VAL LEU PHE SEQRES 4 A 244 SER HIS PRO ALA ASP PHE THR PRO VAL SER THR THR GLU SEQRES 5 A 244 PHE VAL SER PHE ALA ARG ARG TYR GLU ASP PHE GLN ARG SEQRES 6 A 244 LEU GLY VAL ASP LEU ILE GLY LEU SER VAL ASP SER VAL SEQRES 7 A 244 PHE SER HIS ILE LYS TRP LYS GLU TRP ILE GLU ARG HIS SEQRES 8 A 244 ILE GLY VAL ARG ILE PRO PHE PRO ILE ILE ALA ASP PRO SEQRES 9 A 244 GLN GLY THR VAL ALA ARG ARG LEU GLY LEU LEU HIS ALA SEQRES 10 A 244 GLU SER ALA THR HIS THR VAL ARG GLY VAL PHE ILE VAL SEQRES 11 A 244 ASP ALA ARG GLY VAL ILE ARG THR MET LEU TYR TYR PRO SEQRES 12 A 244 MET GLU LEU GLY ARG LEU VAL ASP GLU ILE LEU ARG ILE SEQRES 13 A 244 VAL LYS ALA LEU LYS LEU GLY ASP SER LEU LYS ARG ALA SEQRES 14 A 244 VAL PRO ALA ASP TRP PRO ASN ASN GLU ILE ILE GLY GLU SEQRES 15 A 244 GLY LEU ILE VAL PRO PRO PRO THR THR GLU ASP GLN ALA SEQRES 16 A 244 ARG ALA ARG MET GLU SER GLY GLN TYR ARG SER LEU ASP SEQRES 17 A 244 ALA TRP PHE SER TRP ASP THR PRO ALA SER ARG ASP ASP SEQRES 18 A 244 VAL GLU GLU ALA ARG ARG TYR LEU ARG ARG ALA ALA GLU SEQRES 19 A 244 LYS PRO ALA LYS LEU LEU TYR GLU GLU ALA SEQRES 1 B 244 PRO GLY SER ILE PRO LEU ILE GLY GLU ARG PHE PRO GLU SEQRES 2 B 244 MET GLU VAL THR THR ASP HIS GLY VAL ILE LYS LEU PRO SEQRES 3 B 244 ASP HIS TYR VAL SER GLN GLY LYS TRP PHE VAL LEU PHE SEQRES 4 B 244 SER HIS PRO ALA ASP PHE THR PRO VAL SER THR THR GLU SEQRES 5 B 244 PHE VAL SER PHE ALA ARG ARG TYR GLU ASP PHE GLN ARG SEQRES 6 B 244 LEU GLY VAL ASP LEU ILE GLY LEU SER VAL ASP SER VAL SEQRES 7 B 244 PHE SER HIS ILE LYS TRP LYS GLU TRP ILE GLU ARG HIS SEQRES 8 B 244 ILE GLY VAL ARG ILE PRO PHE PRO ILE ILE ALA ASP PRO SEQRES 9 B 244 GLN GLY THR VAL ALA ARG ARG LEU GLY LEU LEU HIS ALA SEQRES 10 B 244 GLU SER ALA THR HIS THR VAL ARG GLY VAL PHE ILE VAL SEQRES 11 B 244 ASP ALA ARG GLY VAL ILE ARG THR MET LEU TYR TYR PRO SEQRES 12 B 244 MET GLU LEU GLY ARG LEU VAL ASP GLU ILE LEU ARG ILE SEQRES 13 B 244 VAL LYS ALA LEU LYS LEU GLY ASP SER LEU LYS ARG ALA SEQRES 14 B 244 VAL PRO ALA ASP TRP PRO ASN ASN GLU ILE ILE GLY GLU SEQRES 15 B 244 GLY LEU ILE VAL PRO PRO PRO THR THR GLU ASP GLN ALA SEQRES 16 B 244 ARG ALA ARG MET GLU SER GLY GLN TYR ARG SER LEU ASP SEQRES 17 B 244 ALA TRP PHE SER TRP ASP THR PRO ALA SER ARG ASP ASP SEQRES 18 B 244 VAL GLU GLU ALA ARG ARG TYR LEU ARG ARG ALA ALA GLU SEQRES 19 B 244 LYS PRO ALA LYS LEU LEU TYR GLU GLU ALA SEQRES 1 C 244 PRO GLY SER ILE PRO LEU ILE GLY GLU ARG PHE PRO GLU SEQRES 2 C 244 MET GLU VAL THR THR ASP HIS GLY VAL ILE LYS LEU PRO SEQRES 3 C 244 ASP HIS TYR VAL SER GLN GLY LYS TRP PHE VAL LEU PHE SEQRES 4 C 244 SER HIS PRO ALA ASP PHE THR PRO VAL SER THR THR GLU SEQRES 5 C 244 PHE VAL SER PHE ALA ARG ARG TYR GLU ASP PHE GLN ARG SEQRES 6 C 244 LEU GLY VAL ASP LEU ILE GLY LEU SER VAL ASP SER VAL SEQRES 7 C 244 PHE SER HIS ILE LYS TRP LYS GLU TRP ILE GLU ARG HIS SEQRES 8 C 244 ILE GLY VAL ARG ILE PRO PHE PRO ILE ILE ALA ASP PRO SEQRES 9 C 244 GLN GLY THR VAL ALA ARG ARG LEU GLY LEU LEU HIS ALA SEQRES 10 C 244 GLU SER ALA THR HIS THR VAL ARG GLY VAL PHE ILE VAL SEQRES 11 C 244 ASP ALA ARG GLY VAL ILE ARG THR MET LEU TYR TYR PRO SEQRES 12 C 244 MET GLU LEU GLY ARG LEU VAL ASP GLU ILE LEU ARG ILE SEQRES 13 C 244 VAL LYS ALA LEU LYS LEU GLY ASP SER LEU LYS ARG ALA SEQRES 14 C 244 VAL PRO ALA ASP TRP PRO ASN ASN GLU ILE ILE GLY GLU SEQRES 15 C 244 GLY LEU ILE VAL PRO PRO PRO THR THR GLU ASP GLN ALA SEQRES 16 C 244 ARG ALA ARG MET GLU SER GLY GLN TYR ARG SER LEU ASP SEQRES 17 C 244 ALA TRP PHE SER TRP ASP THR PRO ALA SER ARG ASP ASP SEQRES 18 C 244 VAL GLU GLU ALA ARG ARG TYR LEU ARG ARG ALA ALA GLU SEQRES 19 C 244 LYS PRO ALA LYS LEU LEU TYR GLU GLU ALA SEQRES 1 D 244 PRO GLY SER ILE PRO LEU ILE GLY GLU ARG PHE PRO GLU SEQRES 2 D 244 MET GLU VAL THR THR ASP HIS GLY VAL ILE LYS LEU PRO SEQRES 3 D 244 ASP HIS TYR VAL SER GLN GLY LYS TRP PHE VAL LEU PHE SEQRES 4 D 244 SER HIS PRO ALA ASP PHE THR PRO VAL SER THR THR GLU SEQRES 5 D 244 PHE VAL SER PHE ALA ARG ARG TYR GLU ASP PHE GLN ARG SEQRES 6 D 244 LEU GLY VAL ASP LEU ILE GLY LEU SER VAL ASP SER VAL SEQRES 7 D 244 PHE SER HIS ILE LYS TRP LYS GLU TRP ILE GLU ARG HIS SEQRES 8 D 244 ILE GLY VAL ARG ILE PRO PHE PRO ILE ILE ALA ASP PRO SEQRES 9 D 244 GLN GLY THR VAL ALA ARG ARG LEU GLY LEU LEU HIS ALA SEQRES 10 D 244 GLU SER ALA THR HIS THR VAL ARG GLY VAL PHE ILE VAL SEQRES 11 D 244 ASP ALA ARG GLY VAL ILE ARG THR MET LEU TYR TYR PRO SEQRES 12 D 244 MET GLU LEU GLY ARG LEU VAL ASP GLU ILE LEU ARG ILE SEQRES 13 D 244 VAL LYS ALA LEU LYS LEU GLY ASP SER LEU LYS ARG ALA SEQRES 14 D 244 VAL PRO ALA ASP TRP PRO ASN ASN GLU ILE ILE GLY GLU SEQRES 15 D 244 GLY LEU ILE VAL PRO PRO PRO THR THR GLU ASP GLN ALA SEQRES 16 D 244 ARG ALA ARG MET GLU SER GLY GLN TYR ARG SER LEU ASP SEQRES 17 D 244 ALA TRP PHE SER TRP ASP THR PRO ALA SER ARG ASP ASP SEQRES 18 D 244 VAL GLU GLU ALA ARG ARG TYR LEU ARG ARG ALA ALA GLU SEQRES 19 D 244 LYS PRO ALA LYS LEU LEU TYR GLU GLU ALA FORMUL 5 HOH *330(H2 O) HELIX 1 AA1 PRO A 27 SER A 32 1 6 HELIX 2 AA2 THR A 47 ARG A 60 1 14 HELIX 3 AA3 ARG A 60 LEU A 67 1 8 HELIX 4 AA4 SER A 78 GLY A 94 1 17 HELIX 5 AA5 GLY A 107 LEU A 113 1 7 HELIX 6 AA6 LEU A 150 LYS A 168 1 19 HELIX 7 AA7 GLU A 193 GLU A 201 1 9 HELIX 8 AA8 SER A 219 GLU A 235 1 17 HELIX 9 AA9 PRO B 27 SER B 32 1 6 HELIX 10 AB1 THR B 47 ARG B 60 1 14 HELIX 11 AB2 ARG B 60 LEU B 67 1 8 HELIX 12 AB3 SER B 78 GLY B 94 1 17 HELIX 13 AB4 GLY B 107 GLY B 114 1 8 HELIX 14 AB5 LEU B 150 LYS B 168 1 19 HELIX 15 AB6 THR B 192 ARG B 199 1 8 HELIX 16 AB7 SER B 219 GLU B 235 1 17 HELIX 17 AB8 LEU B 240 GLU B 244 5 5 HELIX 18 AB9 PRO C 27 SER C 32 1 6 HELIX 19 AC1 THR C 47 ARG C 60 1 14 HELIX 20 AC2 ARG C 60 LEU C 67 1 8 HELIX 21 AC3 SER C 78 GLY C 94 1 17 HELIX 22 AC4 GLY C 107 LEU C 113 1 7 HELIX 23 AC5 LEU C 150 LYS C 168 1 19 HELIX 24 AC6 THR C 192 GLU C 201 1 10 HELIX 25 AC7 SER C 219 GLU C 235 1 17 HELIX 26 AC8 PRO D 27 SER D 32 1 6 HELIX 27 AC9 THR D 47 ARG D 60 1 14 HELIX 28 AD1 ARG D 60 LEU D 67 1 8 HELIX 29 AD2 SER D 78 GLY D 94 1 17 HELIX 30 AD3 GLY D 107 LEU D 113 1 7 HELIX 31 AD4 LEU D 150 LYS D 168 1 19 HELIX 32 AD5 ASP D 194 ARG D 199 1 6 HELIX 33 AD6 SER D 219 GLU D 235 1 17 HELIX 34 AD7 LEU D 240 ALA D 245 5 6 SHEET 1 AA1 2 GLY A 3 ILE A 5 0 SHEET 2 AA1 2 GLY B 3 ILE B 5 -1 O GLY B 3 N ILE A 5 SHEET 1 AA214 GLY A 22 LEU A 26 0 SHEET 2 AA214 MET A 15 THR A 19 -1 N MET A 15 O LEU A 26 SHEET 3 AA214 ILE A 101 ALA A 103 -1 O ALA A 103 N THR A 18 SHEET 4 AA214 VAL A 69 SER A 75 1 N GLY A 73 O ILE A 102 SHEET 5 AA214 TRP A 36 PHE A 40 1 N TRP A 36 O ASP A 70 SHEET 6 AA214 ARG A 126 VAL A 131 -1 O VAL A 131 N PHE A 37 SHEET 7 AA214 ILE A 137 TYR A 143 -1 O ARG A 138 N ILE A 130 SHEET 8 AA214 ILE B 137 TYR B 143 -1 O MET B 140 N TYR A 142 SHEET 9 AA214 ARG B 126 VAL B 131 -1 N ILE B 130 O ARG B 138 SHEET 10 AA214 TRP B 36 PHE B 40 -1 N LEU B 39 O PHE B 129 SHEET 11 AA214 VAL B 69 SER B 75 1 O ASP B 70 N TRP B 36 SHEET 12 AA214 ILE B 101 ALA B 103 1 O ILE B 102 N GLY B 73 SHEET 13 AA214 MET B 15 THR B 19 -1 N THR B 18 O ALA B 103 SHEET 14 AA214 GLY B 22 LEU B 26 -1 O LEU B 26 N MET B 15 SHEET 1 AA3 3 LEU A 185 ILE A 186 0 SHEET 2 AA3 3 PHE A 212 ASP A 215 -1 O ASP A 215 N LEU A 185 SHEET 3 AA3 3 ARG A 206 ASP A 209 -1 N LEU A 208 O PHE A 212 SHEET 1 AA4 3 LEU B 185 ILE B 186 0 SHEET 2 AA4 3 PHE B 212 ASP B 215 -1 O ASP B 215 N LEU B 185 SHEET 3 AA4 3 ARG B 206 ASP B 209 -1 N LEU B 208 O PHE B 212 SHEET 1 AA5 2 GLY C 3 ILE C 5 0 SHEET 2 AA5 2 GLY D 3 ILE D 5 -1 O ILE D 5 N GLY C 3 SHEET 1 AA614 GLY C 22 LEU C 26 0 SHEET 2 AA614 MET C 15 THR C 19 -1 N VAL C 17 O ILE C 24 SHEET 3 AA614 ILE C 101 ALA C 103 -1 O ALA C 103 N THR C 18 SHEET 4 AA614 VAL C 69 SER C 75 1 N GLY C 73 O ILE C 102 SHEET 5 AA614 TRP C 36 PHE C 40 1 N VAL C 38 O ASP C 70 SHEET 6 AA614 ARG C 126 VAL C 131 -1 O PHE C 129 N LEU C 39 SHEET 7 AA614 ILE C 137 TYR C 143 -1 O ARG C 138 N ILE C 130 SHEET 8 AA614 ILE D 137 TYR D 143 -1 O TYR D 142 N MET C 140 SHEET 9 AA614 ARG D 126 VAL D 131 -1 N ILE D 130 O ARG D 138 SHEET 10 AA614 TRP D 36 PHE D 40 -1 N PHE D 37 O VAL D 131 SHEET 11 AA614 VAL D 69 SER D 75 1 O ASP D 70 N VAL D 38 SHEET 12 AA614 ILE D 101 ALA D 103 1 O ILE D 102 N GLY D 73 SHEET 13 AA614 MET D 15 THR D 19 -1 N THR D 18 O ALA D 103 SHEET 14 AA614 GLY D 22 LEU D 26 -1 O LEU D 26 N MET D 15 SHEET 1 AA7 3 LEU C 185 ILE C 186 0 SHEET 2 AA7 3 PHE C 212 ASP C 215 -1 O ASP C 215 N LEU C 185 SHEET 3 AA7 3 ARG C 206 ASP C 209 -1 N ARG C 206 O TRP C 214 SHEET 1 AA8 3 LEU D 185 ILE D 186 0 SHEET 2 AA8 3 PHE D 212 ASP D 215 -1 O ASP D 215 N LEU D 185 SHEET 3 AA8 3 ARG D 206 ASP D 209 -1 N ARG D 206 O TRP D 214 CISPEP 1 LEU A 26 PRO A 27 0 -5.52 CISPEP 2 TRP A 175 PRO A 176 0 8.62 CISPEP 3 LEU B 26 PRO B 27 0 -6.28 CISPEP 4 TRP B 175 PRO B 176 0 7.77 CISPEP 5 LEU C 26 PRO C 27 0 -8.20 CISPEP 6 TRP C 175 PRO C 176 0 4.99 CISPEP 7 LEU D 26 PRO D 27 0 -6.22 CISPEP 8 TRP D 175 PRO D 176 0 5.24 CRYST1 98.496 98.711 194.056 90.00 90.00 90.00 P 21 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010153 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010131 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005153 0.00000