HEADER ELECTRON TRANSPORT 02-SEP-19 6KUM TITLE FERREDOXIN I FROM C. REINHARDTII, LOW X-RAY DOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN, CHLOROPLASTIC; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; SOURCE 3 ORGANISM_TAXID: 3055; SOURCE 4 GENE: PETF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS [2FE2S] CLUSTER, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR Y.ONISHI,G.KURISU,H.TANAKA REVDAT 3 27-MAR-24 6KUM 1 REMARK REVDAT 2 10-JUN-20 6KUM 1 JRNL REVDAT 1 20-MAY-20 6KUM 0 JRNL AUTH Y.OHNISHI,N.MURAKI,D.KIYOTA,H.OKUMURA,S.BABA,Y.KAWANO, JRNL AUTH 2 T.KUMASAKA,H.TANAKA,G.KURISU JRNL TITL X-RAY DOSE-DEPENDENT STRUCTURAL CHANGES OF THE [2FE-2S] JRNL TITL 2 FERREDOXIN FROM CHLAMYDOMONAS REINHARDTII. JRNL REF J.BIOCHEM. V. 167 549 2020 JRNL REFN ISSN 0021-924X JRNL PMID 32282907 JRNL DOI 10.1093/JB/MVAA045 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.190 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 54418 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 2688 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.7400 - 3.7332 0.97 2752 169 0.1586 0.1584 REMARK 3 2 3.7332 - 2.9641 0.97 2810 135 0.1564 0.1457 REMARK 3 3 2.9641 - 2.5897 0.97 2757 160 0.1636 0.1836 REMARK 3 4 2.5897 - 2.3531 0.97 2774 136 0.1687 0.1870 REMARK 3 5 2.3531 - 2.1845 0.97 2781 143 0.1674 0.2069 REMARK 3 6 2.1845 - 2.0557 0.96 2743 142 0.1753 0.1932 REMARK 3 7 2.0557 - 1.9528 0.95 2791 132 0.1688 0.1974 REMARK 3 8 1.9528 - 1.8678 0.95 2747 111 0.1620 0.1725 REMARK 3 9 1.8678 - 1.7959 0.95 2715 149 0.1746 0.2160 REMARK 3 10 1.7959 - 1.7339 0.95 2722 135 0.1720 0.2151 REMARK 3 11 1.7339 - 1.6797 0.94 2752 106 0.1714 0.1847 REMARK 3 12 1.6797 - 1.6317 0.94 2697 132 0.1856 0.2220 REMARK 3 13 1.6317 - 1.5888 0.94 2748 135 0.1925 0.2273 REMARK 3 14 1.5888 - 1.5500 0.93 2667 177 0.1879 0.2336 REMARK 3 15 1.5500 - 1.5148 0.93 2599 159 0.1887 0.2396 REMARK 3 16 1.5148 - 1.4825 0.94 2761 138 0.1971 0.2164 REMARK 3 17 1.4825 - 1.4529 0.92 2602 143 0.1950 0.2345 REMARK 3 18 1.4529 - 1.4255 0.93 2657 141 0.2134 0.2305 REMARK 3 19 1.4255 - 1.4000 0.92 2655 145 0.2016 0.1807 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 8.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1531 REMARK 3 ANGLE : 1.435 2102 REMARK 3 CHIRALITY : 0.092 238 REMARK 3 PLANARITY : 0.008 290 REMARK 3 DIHEDRAL : 9.151 906 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 0:7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.107 -14.722 -9.835 REMARK 3 T TENSOR REMARK 3 T11: 0.0562 T22: 0.0591 REMARK 3 T33: 0.0661 T12: -0.0143 REMARK 3 T13: 0.0162 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 5.9230 L22: 3.4804 REMARK 3 L33: 4.9264 L12: 2.1762 REMARK 3 L13: 2.6582 L23: 2.1242 REMARK 3 S TENSOR REMARK 3 S11: 0.1213 S12: -0.2410 S13: -0.1731 REMARK 3 S21: 0.0305 S22: 0.0734 S23: 0.0724 REMARK 3 S31: 0.0874 S32: -0.2306 S33: -0.2049 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 8:16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.306 -17.606 -14.029 REMARK 3 T TENSOR REMARK 3 T11: 0.1465 T22: 0.0659 REMARK 3 T33: 0.1248 T12: -0.0221 REMARK 3 T13: -0.0452 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.1178 L22: 1.9603 REMARK 3 L33: 1.3677 L12: 1.1518 REMARK 3 L13: -1.1596 L23: -0.1296 REMARK 3 S TENSOR REMARK 3 S11: -0.1994 S12: 0.1904 S13: 0.0496 REMARK 3 S21: -0.3772 S22: 0.1369 S23: 0.2930 REMARK 3 S31: 0.1072 S32: -0.0886 S33: -0.0280 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 17:33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.944 -14.720 -14.924 REMARK 3 T TENSOR REMARK 3 T11: 0.1131 T22: 0.0545 REMARK 3 T33: 0.0833 T12: 0.0054 REMARK 3 T13: 0.0116 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.0910 L22: 2.6692 REMARK 3 L33: 4.3210 L12: 0.4123 REMARK 3 L13: 0.8232 L23: 1.5801 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: 0.0880 S13: -0.2162 REMARK 3 S21: -0.1643 S22: 0.0713 S23: -0.2610 REMARK 3 S31: 0.3483 S32: 0.3044 S33: -0.0444 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 34:51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.515 -5.585 -20.451 REMARK 3 T TENSOR REMARK 3 T11: 0.1167 T22: 0.0621 REMARK 3 T33: 0.0587 T12: -0.0110 REMARK 3 T13: 0.0101 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.6403 L22: 0.8418 REMARK 3 L33: 4.1698 L12: 0.7519 REMARK 3 L13: -1.7848 L23: -0.6863 REMARK 3 S TENSOR REMARK 3 S11: 0.1128 S12: 0.0207 S13: 0.2084 REMARK 3 S21: -0.1556 S22: 0.0683 S23: -0.0117 REMARK 3 S31: -0.1165 S32: 0.2399 S33: -0.1619 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 52:76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.231 0.831 -13.765 REMARK 3 T TENSOR REMARK 3 T11: 0.0777 T22: 0.0584 REMARK 3 T33: 0.0782 T12: -0.0132 REMARK 3 T13: -0.0093 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.8129 L22: 3.8133 REMARK 3 L33: 2.1483 L12: 0.2820 REMARK 3 L13: 0.0711 L23: -0.5424 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: -0.0040 S13: 0.2032 REMARK 3 S21: -0.0501 S22: -0.0126 S23: -0.0286 REMARK 3 S31: -0.2233 S32: 0.1138 S33: 0.0232 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 77:86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.238 -9.183 -9.023 REMARK 3 T TENSOR REMARK 3 T11: 0.0477 T22: 0.0435 REMARK 3 T33: 0.0485 T12: -0.0047 REMARK 3 T13: -0.0003 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 4.1503 L22: 2.8538 REMARK 3 L33: 2.8968 L12: 1.1462 REMARK 3 L13: 0.2986 L23: 0.5477 REMARK 3 S TENSOR REMARK 3 S11: -0.0849 S12: 0.0071 S13: 0.0751 REMARK 3 S21: -0.0346 S22: 0.0337 S23: 0.0370 REMARK 3 S31: 0.0961 S32: 0.0018 S33: -0.0073 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 87:93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.383 -4.200 -22.402 REMARK 3 T TENSOR REMARK 3 T11: 0.1256 T22: 0.0615 REMARK 3 T33: 0.0570 T12: 0.0155 REMARK 3 T13: 0.0034 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 5.1675 L22: 2.5574 REMARK 3 L33: 2.9786 L12: 0.1157 REMARK 3 L13: 0.8669 L23: 0.1671 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: 0.2704 S13: 0.2402 REMARK 3 S21: -0.1502 S22: 0.0743 S23: 0.1906 REMARK 3 S31: -0.2314 S32: -0.1463 S33: -0.0651 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 0:16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.200 -22.776 -36.053 REMARK 3 T TENSOR REMARK 3 T11: 0.1676 T22: 0.1207 REMARK 3 T33: 0.1286 T12: 0.0115 REMARK 3 T13: -0.0584 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 3.3592 L22: 2.0494 REMARK 3 L33: 4.8091 L12: 0.7247 REMARK 3 L13: 0.7463 L23: 0.9020 REMARK 3 S TENSOR REMARK 3 S11: 0.1047 S12: -0.3334 S13: -0.2591 REMARK 3 S21: 0.4095 S22: 0.0997 S23: -0.3937 REMARK 3 S31: 0.2130 S32: 0.3178 S33: -0.1892 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN B AND RESID 17:33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.076 -19.806 -34.166 REMARK 3 T TENSOR REMARK 3 T11: 0.2621 T22: 0.0863 REMARK 3 T33: 0.0774 T12: 0.0158 REMARK 3 T13: 0.0269 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 0.9959 L22: 0.0498 REMARK 3 L33: 2.7166 L12: 0.0294 REMARK 3 L13: 0.0959 L23: 0.2220 REMARK 3 S TENSOR REMARK 3 S11: -0.1415 S12: -0.2081 S13: -0.0693 REMARK 3 S21: 0.6166 S22: 0.0215 S23: 0.4732 REMARK 3 S31: 0.2814 S32: -0.1291 S33: 0.0047 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 34:51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.869 -9.257 -35.000 REMARK 3 T TENSOR REMARK 3 T11: 0.1412 T22: 0.0493 REMARK 3 T33: 0.0543 T12: 0.0032 REMARK 3 T13: -0.0100 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 3.0743 L22: 1.4814 REMARK 3 L33: 2.3515 L12: -1.1679 REMARK 3 L13: -1.8730 L23: 1.2795 REMARK 3 S TENSOR REMARK 3 S11: 0.0877 S12: -0.0027 S13: 0.1347 REMARK 3 S21: 0.0977 S22: -0.0532 S23: -0.0110 REMARK 3 S31: -0.1714 S32: -0.0448 S33: -0.0455 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN B AND RESID 52:70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.092 -6.712 -45.022 REMARK 3 T TENSOR REMARK 3 T11: 0.0997 T22: 0.0801 REMARK 3 T33: 0.0696 T12: -0.0122 REMARK 3 T13: -0.0109 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.0731 L22: 7.7313 REMARK 3 L33: 2.8118 L12: 0.0851 REMARK 3 L13: 0.6771 L23: 1.3352 REMARK 3 S TENSOR REMARK 3 S11: -0.0540 S12: 0.1318 S13: 0.1561 REMARK 3 S21: -0.0696 S22: -0.0464 S23: 0.2182 REMARK 3 S31: -0.2867 S32: -0.0203 S33: 0.1030 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN B AND RESID 71:94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.453 -11.820 -38.429 REMARK 3 T TENSOR REMARK 3 T11: 0.1201 T22: 0.0751 REMARK 3 T33: 0.0654 T12: -0.0263 REMARK 3 T13: -0.0128 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.6749 L22: 1.7937 REMARK 3 L33: 1.4466 L12: -0.1014 REMARK 3 L13: -0.2922 L23: -0.0263 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: -0.0721 S13: 0.1647 REMARK 3 S21: 0.2013 S22: 0.0022 S23: -0.1054 REMARK 3 S31: -0.2260 S32: 0.2160 S33: -0.0112 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6KUM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1300013690. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.26 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54418 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 28.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.30200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM CITRATE, REMARK 280 BENZAMIDINE HYDROCHLORIDE, SODIUM THIOCYANATE, PH 5.6, BATCH REMARK 280 MODE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 94 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CE NZ REMARK 470 LYS A 12 CD CE NZ REMARK 470 GLU A 15 OE1 OE2 REMARK 470 LEU A 31 CD1 CD2 REMARK 470 GLU A 91 CD OE1 OE2 REMARK 470 LYS B 2 CD CE NZ REMARK 470 LYS B 6 CE NZ REMARK 470 LYS B 12 CG CD CE NZ REMARK 470 GLU B 28 CD OE1 OE2 REMARK 470 ASP B 58 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 36 -77.19 -144.38 REMARK 500 SER A 36 -72.35 -149.82 REMARK 500 SER A 60 45.83 -151.19 REMARK 500 SER A 60 23.20 -141.43 REMARK 500 PHE A 61 -36.80 -136.09 REMARK 500 SER B 36 -74.36 -148.52 REMARK 500 SER B 60 34.97 -142.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 101 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 37 SG REMARK 620 2 FES A 101 S1 119.0 REMARK 620 3 FES A 101 S2 101.7 102.2 REMARK 620 4 CYS A 42 SG 105.2 109.6 119.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 101 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 45 SG REMARK 620 2 FES A 101 S1 112.8 REMARK 620 3 FES A 101 S2 112.8 102.8 REMARK 620 4 CYS A 75 SG 106.6 117.7 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 106 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 0 O REMARK 620 2 GLU B 15 OE1 91.9 REMARK 620 3 HOH B 204 O 119.8 138.0 REMARK 620 4 HOH B 215 O 71.6 151.1 48.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 101 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 37 SG REMARK 620 2 FES B 101 S1 120.1 REMARK 620 3 FES B 101 S2 102.5 102.4 REMARK 620 4 CYS B 42 SG 105.5 109.5 117.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 101 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 45 SG REMARK 620 2 FES B 101 S1 112.0 REMARK 620 3 FES B 101 S2 111.5 104.3 REMARK 620 4 CYS B 75 SG 106.5 118.0 104.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEN A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEN A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEN B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 106 DBREF 6KUM A 0 94 UNP P07839 FER_CHLRE 32 126 DBREF 6KUM B 0 94 UNP P07839 FER_CHLRE 32 126 SEQRES 1 A 95 ALA TYR LYS VAL THR LEU LYS THR PRO SER GLY ASP LYS SEQRES 2 A 95 THR ILE GLU CYS PRO ALA ASP THR TYR ILE LEU ASP ALA SEQRES 3 A 95 ALA GLU GLU ALA GLY LEU ASP LEU PRO TYR SER CYS ARG SEQRES 4 A 95 ALA GLY ALA CYS SER SER CYS ALA GLY LYS VAL ALA ALA SEQRES 5 A 95 GLY THR VAL ASP GLN SER ASP GLN SER PHE LEU ASP ASP SEQRES 6 A 95 ALA GLN MET GLY ASN GLY PHE VAL LEU THR CYS VAL ALA SEQRES 7 A 95 TYR PRO THR SER ASP CYS THR ILE GLN THR HIS GLN GLU SEQRES 8 A 95 GLU ALA LEU TYR SEQRES 1 B 95 ALA TYR LYS VAL THR LEU LYS THR PRO SER GLY ASP LYS SEQRES 2 B 95 THR ILE GLU CYS PRO ALA ASP THR TYR ILE LEU ASP ALA SEQRES 3 B 95 ALA GLU GLU ALA GLY LEU ASP LEU PRO TYR SER CYS ARG SEQRES 4 B 95 ALA GLY ALA CYS SER SER CYS ALA GLY LYS VAL ALA ALA SEQRES 5 B 95 GLY THR VAL ASP GLN SER ASP GLN SER PHE LEU ASP ASP SEQRES 6 B 95 ALA GLN MET GLY ASN GLY PHE VAL LEU THR CYS VAL ALA SEQRES 7 B 95 TYR PRO THR SER ASP CYS THR ILE GLN THR HIS GLN GLU SEQRES 8 B 95 GLU ALA LEU TYR HET FES A 101 4 HET BEN A 102 9 HET BEN A 103 9 HET FES B 101 4 HET BEN B 102 9 HET SCN B 103 3 HET CL B 104 1 HET CL B 105 1 HET NA B 106 1 HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM BEN BENZAMIDINE HETNAM SCN THIOCYANATE ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 3 FES 2(FE2 S2) FORMUL 4 BEN 3(C7 H8 N2) FORMUL 8 SCN C N S 1- FORMUL 9 CL 2(CL 1-) FORMUL 11 NA NA 1+ FORMUL 12 HOH *196(H2 O) HELIX 1 AA1 TYR A 21 ALA A 29 1 9 HELIX 2 AA2 ASP A 63 ASN A 69 1 7 HELIX 3 AA3 CYS A 75 ALA A 77 5 3 HELIX 4 AA4 GLN A 89 LEU A 93 5 5 HELIX 5 AA5 TYR B 21 ALA B 29 1 9 HELIX 6 AA6 ASP B 63 ASN B 69 1 7 HELIX 7 AA7 CYS B 75 ALA B 77 5 3 HELIX 8 AA8 GLN B 89 TYR B 94 1 6 SHEET 1 AA1 5 GLY A 10 CYS A 16 0 SHEET 2 AA1 5 TYR A 1 THR A 7 -1 N VAL A 3 O ILE A 14 SHEET 3 AA1 5 CYS A 83 GLN A 86 1 O CYS A 83 N THR A 4 SHEET 4 AA1 5 ALA A 46 ALA A 51 -1 N LYS A 48 O GLN A 86 SHEET 5 AA1 5 PHE A 71 LEU A 73 -1 O VAL A 72 N GLY A 47 SHEET 1 AA2 2 VAL A 54 ASP A 55 0 SHEET 2 AA2 2 TYR A 78 PRO A 79 -1 O TYR A 78 N ASP A 55 SHEET 1 AA3 5 GLY B 10 CYS B 16 0 SHEET 2 AA3 5 TYR B 1 THR B 7 -1 N VAL B 3 O ILE B 14 SHEET 3 AA3 5 CYS B 83 GLN B 86 1 O CYS B 83 N THR B 4 SHEET 4 AA3 5 ALA B 46 ALA B 51 -1 N ALA B 50 O THR B 84 SHEET 5 AA3 5 PHE B 71 LEU B 73 -1 O VAL B 72 N GLY B 47 SHEET 1 AA4 2 VAL B 54 ASP B 55 0 SHEET 2 AA4 2 TYR B 78 PRO B 79 -1 O TYR B 78 N ASP B 55 LINK SG CYS A 37 FE1 FES A 101 1555 1555 2.34 LINK SG CYS A 42 FE1 FES A 101 1555 1555 2.30 LINK SG CYS A 45 FE2 FES A 101 1555 1555 2.30 LINK SG CYS A 75 FE2 FES A 101 1555 1555 2.30 LINK O ALA B 0 NA NA B 106 1555 1555 2.98 LINK OE1 GLU B 15 NA NA B 106 1555 1555 2.69 LINK SG CYS B 37 FE1 FES B 101 1555 1555 2.35 LINK SG CYS B 42 FE1 FES B 101 1555 1555 2.30 LINK SG CYS B 45 FE2 FES B 101 1555 1555 2.33 LINK SG CYS B 75 FE2 FES B 101 1555 1555 2.30 LINK NA NA B 106 O HOH B 204 1555 1555 2.93 LINK NA NA B 106 O AHOH B 215 1555 1555 2.63 SITE 1 AC1 8 SER A 36 CYS A 37 ARG A 38 GLY A 40 SITE 2 AC1 8 ALA A 41 CYS A 42 CYS A 45 CYS A 75 SITE 1 AC2 9 TYR A 1 THR A 80 BEN A 103 HOH A 259 SITE 2 AC2 9 ALA B 18 ASP B 19 ASP B 55 TYR B 78 SITE 3 AC2 9 CL B 105 SITE 1 AC3 7 ASP A 19 ASP A 55 TYR A 78 BEN A 102 SITE 2 AC3 7 HOH A 233 TYR B 1 CL B 105 SITE 1 AC4 8 SER B 36 CYS B 37 ARG B 38 GLY B 40 SITE 2 AC4 8 ALA B 41 CYS B 42 CYS B 45 CYS B 75 SITE 1 AC5 7 GLU B 15 PRO B 17 GLN B 66 LEU B 93 SITE 2 AC5 7 TYR B 94 HOH B 234 HOH B 242 SITE 1 AC6 5 ALA B 0 ALA B 65 ASN B 69 PHE B 71 SITE 2 AC6 5 NA B 106 SITE 1 AC7 4 LYS B 2 THR B 4 CYS B 83 HOH B 294 SITE 1 AC8 5 BEN A 102 BEN A 103 ALA B 18 TYR B 78 SITE 2 AC8 5 PRO B 79 SITE 1 AC9 6 ALA B 0 LYS B 2 GLU B 15 SCN B 103 SITE 2 AC9 6 HOH B 204 HOH B 215 CRYST1 25.878 32.326 49.915 72.38 78.06 72.39 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.038644 -0.012266 -0.005189 0.00000 SCALE2 0.000000 0.032456 -0.008650 0.00000 SCALE3 0.000000 0.000000 0.021192 0.00000