HEADER HYDROLASE 12-SEP-19 6KXM TITLE CRYSTAL STRUCTURE OF D157N MUTANT OF CHITINIPHILUS SHINANONENSIS TITLE 2 CHITINASE CHIL (CSCHIL) COMPLEXED WITH N,N'-DIACETYLCHITOBIOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAMILY 18 CHITINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CSCHIL; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHITINIPHILUS SHINANONENSIS; SOURCE 3 ORGANISM_TAXID: 553088; SOURCE 4 STRAIN: SAY3; SOURCE 5 GENE: CHIL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCOLD-CHIL KEYWDS CHITIN, CHITINASE, CHITINOLYTIC ENZYME, FAMILY 18 GLYCOSIDE HYDROLASE KEYWDS 2 (GH18), N-ACETYLGLUCOSAMINE (GLCNAC), HYDROLYSIS, KEYWDS 3 TRANSGLYCOSYLATION, ENZYME-PRODUCT COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.UEDA,M.SHIMOSAKA,R.ARAI REVDAT 2 22-NOV-23 6KXM 1 REMARK REVDAT 1 16-SEP-20 6KXM 0 JRNL AUTH M.UEDA,N.SONODA,M.SHIMOSAKA,R.ARAI JRNL TITL CRYSTAL STRUCTURE OF CSCHIL, A CHITINASE FROM CHITINIPHILUS JRNL TITL 2 SHINANONENSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.UEDA,M.SHIMOSAKA,R.ARAI REMARK 1 TITL EXPRESSION, PURIFICATION, CRYSTALLIZATION AND X-RAY REMARK 1 TITL 2 DIFFRACTION ANALYSIS OF CHIL, A CHITINASE FROM CHITINIPHILUS REMARK 1 TITL 3 SHINANONENSIS. REMARK 1 REF ACTA CRYSTALLOGR F STRUCT V. 71 1516 2015 REMARK 1 REF 2 BIOL COMMUN REMARK 1 REFN ESSN 2053-230X REMARK 1 PMID 26625294 REMARK 1 DOI 10.1107/S2053230X15022001 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 50006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.298 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2734 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3757 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.3720 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5796 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 369 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.18000 REMARK 3 B22 (A**2) : 5.16000 REMARK 3 B33 (A**2) : -2.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.249 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.211 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.217 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.247 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6016 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5343 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8157 ; 1.494 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12395 ; 1.278 ; 1.601 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 732 ; 7.611 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 326 ;34.774 ;22.883 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 947 ;14.994 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;13.694 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 747 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6847 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1367 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6KXM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1300013779. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 97 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL REMARK 200 OPTICS : FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54922 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.68200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.920 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6KST REMARK 200 REMARK 200 REMARK: PLATE-LIKE CRYSTAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, 0.2 M NACL, 25% W/V REMARK 280 PEG 3350, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.63300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.55650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.67550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.55650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.63300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.67550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 35 REMARK 465 GLY A 36 REMARK 465 SER A 37 REMARK 465 GLY A 38 REMARK 465 GLY A 39 REMARK 465 THR A 406 REMARK 465 GLY B 35 REMARK 465 GLY B 36 REMARK 465 SER B 37 REMARK 465 GLY B 38 REMARK 465 GLY B 39 REMARK 465 THR B 406 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 387 O HOH B 601 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 53 -115.92 -110.71 REMARK 500 ASP A 90 -83.21 -74.91 REMARK 500 ASN A 157 76.20 -103.67 REMARK 500 VAL A 162 -52.53 74.84 REMARK 500 SER A 233 59.68 -91.60 REMARK 500 ALA A 248 68.91 -150.66 REMARK 500 LEU A 333 97.95 -69.77 REMARK 500 TYR B 53 -125.30 -107.02 REMARK 500 PRO B 87 -9.36 -58.61 REMARK 500 ASP B 90 -82.79 -83.73 REMARK 500 ASN B 157 60.13 -112.89 REMARK 500 VAL B 162 -49.19 82.87 REMARK 500 ASP B 211 1.12 -65.48 REMARK 500 GLU B 218 78.19 -119.82 REMARK 500 THR B 317 -68.88 -92.00 REMARK 500 LEU B 333 97.60 -66.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6KST RELATED DB: PDB REMARK 900 THE WILD-TYPE PROTEIN REMARK 900 RELATED ID: 6KXL RELATED DB: PDB REMARK 900 THE WILD-TYPE PROTEIN COMPLEXED WITH DIACETYLCHITOBIOSE REMARK 900 RELATED ID: 6KXN RELATED DB: PDB REMARK 900 THE W50A MUTANT PROTEIN COMPLEXED WITH DIACETYLCHITOBIOSE DBREF 6KXM A 41 406 UNP F8WSX2 F8WSX2_9NEIS 41 406 DBREF 6KXM B 41 406 UNP F8WSX2 F8WSX2_9NEIS 41 406 SEQADV 6KXM GLY A 35 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM GLY A 36 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM SER A 37 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM GLY A 38 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM GLY A 39 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM SER A 40 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM ASN A 157 UNP F8WSX2 ASP 157 ENGINEERED MUTATION SEQADV 6KXM GLY B 35 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM GLY B 36 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM SER B 37 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM GLY B 38 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM GLY B 39 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM SER B 40 UNP F8WSX2 EXPRESSION TAG SEQADV 6KXM ASN B 157 UNP F8WSX2 ASP 157 ENGINEERED MUTATION SEQRES 1 A 372 GLY GLY SER GLY GLY SER TYR ARG VAL VAL ALA TYR TYR SEQRES 2 A 372 ILE SER TRP GLY ALA TYR GLY ARG SER TYR PHE PRO SER SEQRES 3 A 372 ASP ILE ASP TYR SER LYS VAL THR HIS ILE ASN TYR ALA SEQRES 4 A 372 PHE ALA ASN ILE LYS ASP GLY GLU VAL VAL VAL GLY ASP SEQRES 5 A 372 PRO GLY VAL ASP ASP GLY GLY LYS ASN ASN PHE THR ALA SEQRES 6 A 372 LEU ARG LYS ALA LYS LYS ALA HIS PRO HIS LEU ARG ASN SEQRES 7 A 372 LEU ILE SER VAL GLY GLY TRP SER TRP SER SER GLY PHE SEQRES 8 A 372 SER ASP ALA ALA ALA THR PRO GLU ALA ARG LYS ARG PHE SEQRES 9 A 372 ALA ASP SER ALA VAL ALA PHE ILE ARG LYS TYR GLY PHE SEQRES 10 A 372 ASP GLY VAL ASP ILE ASN TRP GLU TYR PRO VAL GLU GLY SEQRES 11 A 372 GLY ALA GLU ASN MET LYS HIS ARG PRO GLU ASP LYS GLN SEQRES 12 A 372 ASN TYR THR LEU LEU THR ARG SER LEU ARG GLU ALA LEU SEQRES 13 A 372 ASP THR ALA GLY LYS ALA ASP GLY LYS TYR TYR GLU LEU SEQRES 14 A 372 THR THR ALA VAL TRP GLY ASN ASP LYS PHE ILE ALA ASN SEQRES 15 A 372 THR GLU MET ASP LYS VAL SER ARG ASP PHE ASP PHE ILE SEQRES 16 A 372 ASN VAL MET SER TYR ASP PHE ASN GLY THR TRP ASN LYS SEQRES 17 A 372 PHE SER GLY HIS ASN ALA PRO PHE VAL ASN ASP PRO ALA SEQRES 18 A 372 TYR ASP LYS PRO GLY ILE GLY LYS THR PHE ASN VAL VAL SEQRES 19 A 372 SER ALA VAL GLU ALA TYR LEU LYS ALA GLY VAL PRO ALA SEQRES 20 A 372 ASP LYS LEU VAL VAL GLY VAL PRO LEU TYR GLY TYR SER SEQRES 21 A 372 TRP LYS GLY CYS ALA ALA GLY GLU ARG ASN GLY GLU TYR SEQRES 22 A 372 GLN ASP CYS ASN GLY LYS GLY ARG GLY THR TRP GLU ASP SEQRES 23 A 372 GLY ASN LEU ASP PHE THR ASP ILE GLU LYS ASN LEU LEU SEQRES 24 A 372 ASN LYS LYS GLY PHE LYS ARG TYR TRP ASN ASP THR ALA SEQRES 25 A 372 LYS ALA ALA TYR LEU TYR ASN ALA GLU THR GLY GLU PHE SEQRES 26 A 372 VAL THR TYR GLU ASP PRO GLN ALA LEU LYS ILE LYS LEU SEQRES 27 A 372 ASP TYR ILE LYS SER LYS GLY LEU GLY GLY ALA MET TYR SEQRES 28 A 372 TRP GLU ILE THR ALA ASP ARG LYS GLN THR LEU VAL ASN SEQRES 29 A 372 LEU ILE ALA ASP GLU LEU LEU THR SEQRES 1 B 372 GLY GLY SER GLY GLY SER TYR ARG VAL VAL ALA TYR TYR SEQRES 2 B 372 ILE SER TRP GLY ALA TYR GLY ARG SER TYR PHE PRO SER SEQRES 3 B 372 ASP ILE ASP TYR SER LYS VAL THR HIS ILE ASN TYR ALA SEQRES 4 B 372 PHE ALA ASN ILE LYS ASP GLY GLU VAL VAL VAL GLY ASP SEQRES 5 B 372 PRO GLY VAL ASP ASP GLY GLY LYS ASN ASN PHE THR ALA SEQRES 6 B 372 LEU ARG LYS ALA LYS LYS ALA HIS PRO HIS LEU ARG ASN SEQRES 7 B 372 LEU ILE SER VAL GLY GLY TRP SER TRP SER SER GLY PHE SEQRES 8 B 372 SER ASP ALA ALA ALA THR PRO GLU ALA ARG LYS ARG PHE SEQRES 9 B 372 ALA ASP SER ALA VAL ALA PHE ILE ARG LYS TYR GLY PHE SEQRES 10 B 372 ASP GLY VAL ASP ILE ASN TRP GLU TYR PRO VAL GLU GLY SEQRES 11 B 372 GLY ALA GLU ASN MET LYS HIS ARG PRO GLU ASP LYS GLN SEQRES 12 B 372 ASN TYR THR LEU LEU THR ARG SER LEU ARG GLU ALA LEU SEQRES 13 B 372 ASP THR ALA GLY LYS ALA ASP GLY LYS TYR TYR GLU LEU SEQRES 14 B 372 THR THR ALA VAL TRP GLY ASN ASP LYS PHE ILE ALA ASN SEQRES 15 B 372 THR GLU MET ASP LYS VAL SER ARG ASP PHE ASP PHE ILE SEQRES 16 B 372 ASN VAL MET SER TYR ASP PHE ASN GLY THR TRP ASN LYS SEQRES 17 B 372 PHE SER GLY HIS ASN ALA PRO PHE VAL ASN ASP PRO ALA SEQRES 18 B 372 TYR ASP LYS PRO GLY ILE GLY LYS THR PHE ASN VAL VAL SEQRES 19 B 372 SER ALA VAL GLU ALA TYR LEU LYS ALA GLY VAL PRO ALA SEQRES 20 B 372 ASP LYS LEU VAL VAL GLY VAL PRO LEU TYR GLY TYR SER SEQRES 21 B 372 TRP LYS GLY CYS ALA ALA GLY GLU ARG ASN GLY GLU TYR SEQRES 22 B 372 GLN ASP CYS ASN GLY LYS GLY ARG GLY THR TRP GLU ASP SEQRES 23 B 372 GLY ASN LEU ASP PHE THR ASP ILE GLU LYS ASN LEU LEU SEQRES 24 B 372 ASN LYS LYS GLY PHE LYS ARG TYR TRP ASN ASP THR ALA SEQRES 25 B 372 LYS ALA ALA TYR LEU TYR ASN ALA GLU THR GLY GLU PHE SEQRES 26 B 372 VAL THR TYR GLU ASP PRO GLN ALA LEU LYS ILE LYS LEU SEQRES 27 B 372 ASP TYR ILE LYS SER LYS GLY LEU GLY GLY ALA MET TYR SEQRES 28 B 372 TRP GLU ILE THR ALA ASP ARG LYS GLN THR LEU VAL ASN SEQRES 29 B 372 LEU ILE ALA ASP GLU LEU LEU THR HET NAG C 1 15 HET NAG C 2 14 HET NAG D 1 15 HET NAG D 2 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 5 HOH *369(H2 O) HELIX 1 AA1 TRP A 50 TYR A 53 5 4 HELIX 2 AA2 PHE A 58 ILE A 62 5 5 HELIX 3 AA3 ASP A 63 VAL A 67 5 5 HELIX 4 AA4 ASN A 95 HIS A 107 1 13 HELIX 5 AA5 GLY A 124 ALA A 130 1 7 HELIX 6 AA6 THR A 131 GLY A 150 1 20 HELIX 7 AA7 GLU A 174 GLY A 198 1 25 HELIX 8 AA8 ASP A 211 ASN A 216 1 6 HELIX 9 AA9 GLU A 218 SER A 223 1 6 HELIX 10 AB1 ASN A 266 GLY A 278 1 13 HELIX 11 AB2 PRO A 280 ASP A 282 5 3 HELIX 12 AB3 PHE A 325 LEU A 332 1 8 HELIX 13 AB4 ASP A 364 GLY A 379 1 16 HELIX 14 AB5 GLU A 387 ASP A 391 5 5 HELIX 15 AB6 GLN A 394 LEU A 405 1 12 HELIX 16 AB7 TRP B 50 TYR B 53 5 4 HELIX 17 AB8 PHE B 58 ILE B 62 5 5 HELIX 18 AB9 ASP B 63 VAL B 67 5 5 HELIX 19 AC1 ASN B 95 HIS B 107 1 13 HELIX 20 AC2 GLY B 124 ALA B 130 1 7 HELIX 21 AC3 THR B 131 GLY B 150 1 20 HELIX 22 AC4 GLU B 174 GLY B 198 1 25 HELIX 23 AC5 ASP B 211 ASN B 216 1 6 HELIX 24 AC6 GLU B 218 PHE B 226 1 9 HELIX 25 AC7 ASN B 266 GLY B 278 1 13 HELIX 26 AC8 PRO B 280 ASP B 282 5 3 HELIX 27 AC9 PHE B 325 LEU B 332 1 8 HELIX 28 AD1 ASP B 364 GLY B 379 1 16 HELIX 29 AD2 GLU B 387 ASP B 391 5 5 HELIX 30 AD3 GLN B 394 LEU B 405 1 12 SHEET 1 AA110 GLU A 81 VAL A 83 0 SHEET 2 AA110 HIS A 69 LYS A 78 -1 N ASN A 76 O VAL A 83 SHEET 3 AA110 ARG A 111 GLY A 117 1 O LEU A 113 N ILE A 70 SHEET 4 AA110 GLY A 153 ASN A 157 1 O ASP A 155 N ILE A 114 SHEET 5 AA110 GLU A 202 VAL A 207 1 O THR A 204 N ILE A 156 SHEET 6 AA110 PHE A 228 VAL A 231 1 O ASN A 230 N THR A 205 SHEET 7 AA110 LEU A 284 PRO A 289 1 O VAL A 285 N ILE A 229 SHEET 8 AA110 GLY A 382 TRP A 386 1 O GLY A 382 N VAL A 286 SHEET 9 AA110 ARG A 42 ILE A 48 1 N TYR A 46 O TYR A 385 SHEET 10 AA110 HIS A 69 LYS A 78 1 O ALA A 73 N TYR A 47 SHEET 1 AA2 5 ASN A 322 ASP A 324 0 SHEET 2 AA2 5 TYR A 291 TRP A 295 -1 N GLY A 292 O LEU A 323 SHEET 3 AA2 5 GLU A 358 THR A 361 -1 O THR A 361 N TYR A 293 SHEET 4 AA2 5 ALA A 348 ASN A 353 -1 N ASN A 353 O GLU A 358 SHEET 5 AA2 5 PHE A 338 ASN A 343 -1 N TYR A 341 O TYR A 350 SHEET 1 AA310 GLU B 81 VAL B 84 0 SHEET 2 AA310 HIS B 69 LYS B 78 -1 N LYS B 78 O GLU B 81 SHEET 3 AA310 ARG B 111 GLY B 118 1 O LEU B 113 N ILE B 70 SHEET 4 AA310 GLY B 153 TRP B 158 1 O ASP B 155 N VAL B 116 SHEET 5 AA310 GLU B 202 TRP B 208 1 O THR B 204 N ILE B 156 SHEET 6 AA310 PHE B 228 MET B 232 1 O MET B 232 N VAL B 207 SHEET 7 AA310 LEU B 284 VAL B 286 1 O VAL B 285 N ILE B 229 SHEET 8 AA310 GLY B 382 TYR B 385 1 O GLY B 382 N VAL B 286 SHEET 9 AA310 ARG B 42 ILE B 48 1 N TYR B 46 O TYR B 385 SHEET 10 AA310 HIS B 69 LYS B 78 1 O ALA B 73 N TYR B 47 SHEET 1 AA4 5 ASN B 322 ASP B 324 0 SHEET 2 AA4 5 TYR B 291 TRP B 295 -1 N GLY B 292 O LEU B 323 SHEET 3 AA4 5 PHE B 359 THR B 361 -1 O THR B 361 N TYR B 293 SHEET 4 AA4 5 ALA B 348 ASN B 353 -1 N LEU B 351 O VAL B 360 SHEET 5 AA4 5 PHE B 338 ASN B 343 -1 N TYR B 341 O TYR B 350 SSBOND 1 CYS A 298 CYS A 310 1555 1555 2.10 SSBOND 2 CYS B 298 CYS B 310 1555 1555 2.06 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 CISPEP 1 ALA A 73 PHE A 74 0 -5.89 CISPEP 2 GLU A 159 TYR A 160 0 -3.44 CISPEP 3 TRP A 386 GLU A 387 0 -18.91 CISPEP 4 ALA B 73 PHE B 74 0 -4.54 CISPEP 5 GLU B 159 TYR B 160 0 6.20 CISPEP 6 TRP B 386 GLU B 387 0 -18.51 CRYST1 69.266 81.351 131.113 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014437 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012292 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007627 0.00000