HEADER OXIDOREDUCTASE 16-SEP-19 6KY6 TITLE CRYSTAL STRUCTURE OF A THERMOSTABLE ALDO-KETO REDUCTASE TM1743 IN TITLE 2 COMPLEXS WITH INHIBITOR EPALRESTAT IN SPACE GROUP P3221CC COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OXIDOREDUCTASE,ALDO/KETO REDUCTASE FAMILY; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA (STRAIN ATCC 43589 / MSB8 / SOURCE 3 DSM 3109 / JCM 10099); SOURCE 4 ORGANISM_TAXID: 243274; SOURCE 5 STRAIN: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099; SOURCE 6 GENE: TM_1743, TMARI_1751; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET-28A(+) KEYWDS ALDO-KETONE REDUCTASE, TOLRESTAT, EPALRESTAT, COMPETITIVE INHIBITOR, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR C.Y.ZHANG,Z.Z.MIN,X.M.LIU,C.WANG,W.R.TANG REVDAT 4 22-NOV-23 6KY6 1 REMARK REVDAT 3 13-MAY-20 6KY6 1 TITLE REVDAT 2 08-APR-20 6KY6 1 JRNL REVDAT 1 02-OCT-19 6KY6 0 JRNL AUTH C.ZHANG,Z.MIN,X.LIU,C.WANG,Z.WANG,J.SHEN,W.TANG,X.ZHANG, JRNL AUTH 2 D.LIU,X.XU JRNL TITL TOLRESTAT ACTS ATYPICALLY AS A COMPETITIVE INHIBITOR OF THE JRNL TITL 2 THERMOSTABLE ALDO-KETO REDUCTASE TM1743 FROM THERMOTOGA JRNL TITL 3 MARITIMA. JRNL REF FEBS LETT. V. 594 564 2020 JRNL REFN ISSN 0014-5793 JRNL PMID 31573681 JRNL DOI 10.1002/1873-3468.13630 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 44894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2364 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3290 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4412 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 127 REMARK 3 SOLVENT ATOMS : 305 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.54000 REMARK 3 B22 (A**2) : 0.54000 REMARK 3 B33 (A**2) : -1.75000 REMARK 3 B12 (A**2) : 0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.201 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.178 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.713 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4635 ; 0.010 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 4229 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6282 ; 1.460 ; 1.782 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9934 ; 0.449 ; 1.713 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 550 ; 5.880 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;29.888 ;16.753 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 692 ;14.728 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;14.634 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 598 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5097 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 805 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6KY6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1300013824. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97861 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47061 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.6300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.423 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5DAN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 100000, 0.1 M SODIUM ACETATE REMARK 280 TRIHYDRATE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 123.84333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.92167 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.92167 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 123.84333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 26 -93.42 -109.26 REMARK 500 SER A 199 51.34 39.65 REMARK 500 ASN A 238 2.97 82.05 REMARK 500 ILE A 242 77.28 -118.03 REMARK 500 PHE B 26 -93.26 -110.57 REMARK 500 ASN B 238 3.08 82.13 REMARK 500 ILE B 242 78.07 -118.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 EPR A 302 REMARK 610 EPR B 302 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPR A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPR B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6KIY RELATED DB: PDB REMARK 900 THE EPALRESTAT-BOUND TM1743 IN SPACE GROUP P3121. REMARK 900 RELATED ID: 6KIK RELATED DB: PDB REMARK 900 THE TOLRESTAT-BOUND TM1743. DBREF 6KY6 A 1 274 UNP Q9X265 Q9X265_THEMA 1 274 DBREF 6KY6 B 1 274 UNP Q9X265 Q9X265_THEMA 1 274 SEQRES 1 A 274 MET LEU TYR LYS GLU LEU GLY ARG THR GLY GLU GLU ILE SEQRES 2 A 274 PRO ALA LEU GLY LEU GLY THR TRP GLY ILE GLY GLY PHE SEQRES 3 A 274 GLU THR PRO ASP TYR SER ARG ASP GLU GLU MET VAL GLU SEQRES 4 A 274 LEU LEU LYS THR ALA ILE LYS MET GLY TYR THR HIS ILE SEQRES 5 A 274 ASP THR ALA GLU TYR TYR GLY GLY GLY HIS THR GLU GLU SEQRES 6 A 274 LEU ILE GLY LYS ALA ILE LYS ASP PHE ARG ARG GLU ASP SEQRES 7 A 274 LEU PHE ILE VAL SER LYS VAL TRP PRO THR HIS LEU ARG SEQRES 8 A 274 ARG ASP ASP LEU LEU ARG SER LEU GLU ASN THR LEU LYS SEQRES 9 A 274 ARG LEU ASP THR ASP TYR VAL ASP LEU TYR LEU ILE HIS SEQRES 10 A 274 TRP PRO ASN PRO GLU ILE PRO LEU GLU GLU THR LEU SER SEQRES 11 A 274 ALA MET ALA GLU GLY VAL ARG GLN GLY LEU ILE ARG TYR SEQRES 12 A 274 ILE GLY VAL SER ASN PHE ASP ARG ARG LEU LEU GLU GLU SEQRES 13 A 274 ALA ILE SER LYS SER GLN GLU PRO ILE VAL CYS ASP GLN SEQRES 14 A 274 VAL LYS TYR ASN ILE GLU ASP ARG ASP PRO GLU ARG ASP SEQRES 15 A 274 GLY LEU LEU GLU PHE CYS GLN LYS ASN GLY VAL THR LEU SEQRES 16 A 274 VAL ALA TYR SER PRO LEU ARG ARG THR LEU LEU SER GLU SEQRES 17 A 274 LYS THR LYS ARG THR LEU GLU GLU ILE ALA LYS ASN HIS SEQRES 18 A 274 GLY ALA THR ILE TYR GLN ILE MET LEU ALA TRP LEU LEU SEQRES 19 A 274 ALA LYS PRO ASN VAL VAL ALA ILE PRO LYS ALA GLY ARG SEQRES 20 A 274 VAL GLU HIS LEU ARG GLU ASN LEU LYS ALA THR GLU ILE SEQRES 21 A 274 LYS LEU SER GLU GLU GLU MET LYS LEU LEU ASP SER LEU SEQRES 22 A 274 GLY SEQRES 1 B 274 MET LEU TYR LYS GLU LEU GLY ARG THR GLY GLU GLU ILE SEQRES 2 B 274 PRO ALA LEU GLY LEU GLY THR TRP GLY ILE GLY GLY PHE SEQRES 3 B 274 GLU THR PRO ASP TYR SER ARG ASP GLU GLU MET VAL GLU SEQRES 4 B 274 LEU LEU LYS THR ALA ILE LYS MET GLY TYR THR HIS ILE SEQRES 5 B 274 ASP THR ALA GLU TYR TYR GLY GLY GLY HIS THR GLU GLU SEQRES 6 B 274 LEU ILE GLY LYS ALA ILE LYS ASP PHE ARG ARG GLU ASP SEQRES 7 B 274 LEU PHE ILE VAL SER LYS VAL TRP PRO THR HIS LEU ARG SEQRES 8 B 274 ARG ASP ASP LEU LEU ARG SER LEU GLU ASN THR LEU LYS SEQRES 9 B 274 ARG LEU ASP THR ASP TYR VAL ASP LEU TYR LEU ILE HIS SEQRES 10 B 274 TRP PRO ASN PRO GLU ILE PRO LEU GLU GLU THR LEU SER SEQRES 11 B 274 ALA MET ALA GLU GLY VAL ARG GLN GLY LEU ILE ARG TYR SEQRES 12 B 274 ILE GLY VAL SER ASN PHE ASP ARG ARG LEU LEU GLU GLU SEQRES 13 B 274 ALA ILE SER LYS SER GLN GLU PRO ILE VAL CYS ASP GLN SEQRES 14 B 274 VAL LYS TYR ASN ILE GLU ASP ARG ASP PRO GLU ARG ASP SEQRES 15 B 274 GLY LEU LEU GLU PHE CYS GLN LYS ASN GLY VAL THR LEU SEQRES 16 B 274 VAL ALA TYR SER PRO LEU ARG ARG THR LEU LEU SER GLU SEQRES 17 B 274 LYS THR LYS ARG THR LEU GLU GLU ILE ALA LYS ASN HIS SEQRES 18 B 274 GLY ALA THR ILE TYR GLN ILE MET LEU ALA TRP LEU LEU SEQRES 19 B 274 ALA LYS PRO ASN VAL VAL ALA ILE PRO LYS ALA GLY ARG SEQRES 20 B 274 VAL GLU HIS LEU ARG GLU ASN LEU LYS ALA THR GLU ILE SEQRES 21 B 274 LYS LEU SER GLU GLU GLU MET LYS LEU LEU ASP SER LEU SEQRES 22 B 274 GLY HET NAP A 301 48 HET EPR A 302 13 HET CL A 303 1 HET CL A 304 1 HET NAP B 301 48 HET EPR B 302 13 HET CL B 303 1 HET CL B 304 1 HET CL B 305 1 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM EPR {5-[(2E)-2-METHYL-3-PHENYLPROP-2-EN-1-YLIDENE]-4-OXO-2- HETNAM 2 EPR THIOXO-1,3-THIAZOLIDIN-3-YL}ACETIC ACID HETNAM CL CHLORIDE ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN EPR EPALRESTAT FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 4 EPR 2(C15 H13 N O3 S2) FORMUL 5 CL 5(CL 1-) FORMUL 12 HOH *305(H2 O) HELIX 1 AA1 ARG A 33 GLY A 48 1 16 HELIX 2 AA2 TYR A 57 GLY A 60 5 4 HELIX 3 AA3 GLY A 61 ILE A 71 1 11 HELIX 4 AA4 LYS A 72 PHE A 74 5 3 HELIX 5 AA5 ARG A 75 LEU A 79 5 5 HELIX 6 AA6 TRP A 86 LEU A 90 5 5 HELIX 7 AA7 ARG A 91 ASP A 107 1 17 HELIX 8 AA8 PRO A 124 GLN A 138 1 15 HELIX 9 AA9 ASP A 150 SER A 161 1 12 HELIX 10 AB1 ARG A 177 ASP A 182 1 6 HELIX 11 AB2 GLY A 183 GLY A 192 1 10 HELIX 12 AB3 LEU A 201 LEU A 205 5 5 HELIX 13 AB4 SER A 207 HIS A 221 1 15 HELIX 14 AB5 THR A 224 ALA A 235 1 12 HELIX 15 AB6 ARG A 247 ALA A 257 1 11 HELIX 16 AB7 THR A 258 ILE A 260 5 3 HELIX 17 AB8 SER A 263 SER A 272 1 10 HELIX 18 AB9 ARG B 33 GLY B 48 1 16 HELIX 19 AC1 TYR B 57 GLY B 60 5 4 HELIX 20 AC2 GLY B 61 ILE B 71 1 11 HELIX 21 AC3 LYS B 72 PHE B 74 5 3 HELIX 22 AC4 ARG B 75 LEU B 79 5 5 HELIX 23 AC5 TRP B 86 LEU B 90 5 5 HELIX 24 AC6 ARG B 91 ASP B 107 1 17 HELIX 25 AC7 PRO B 124 GLN B 138 1 15 HELIX 26 AC8 ASP B 150 SER B 161 1 12 HELIX 27 AC9 ARG B 177 ASP B 182 1 6 HELIX 28 AD1 GLY B 183 GLY B 192 1 10 HELIX 29 AD2 LEU B 201 LEU B 205 5 5 HELIX 30 AD3 SER B 207 HIS B 221 1 15 HELIX 31 AD4 THR B 224 ALA B 235 1 12 HELIX 32 AD5 ARG B 247 ALA B 257 1 11 HELIX 33 AD6 THR B 258 ILE B 260 5 3 HELIX 34 AD7 SER B 263 SER B 272 1 10 SHEET 1 AA1 2 TYR A 3 GLU A 5 0 SHEET 2 AA1 2 GLU A 12 PRO A 14 -1 O ILE A 13 N LYS A 4 SHEET 1 AA2 8 LEU A 18 GLY A 19 0 SHEET 2 AA2 8 HIS A 51 ASP A 53 1 O ASP A 53 N LEU A 18 SHEET 3 AA2 8 PHE A 80 VAL A 85 1 O VAL A 82 N ILE A 52 SHEET 4 AA2 8 VAL A 111 ILE A 116 1 O LEU A 113 N SER A 83 SHEET 5 AA2 8 ILE A 141 SER A 147 1 O TYR A 143 N TYR A 114 SHEET 6 AA2 8 ILE A 165 LYS A 171 1 O VAL A 166 N ILE A 144 SHEET 7 AA2 8 THR A 194 TYR A 198 1 O TYR A 198 N VAL A 170 SHEET 8 AA2 8 VAL A 239 ILE A 242 1 O VAL A 240 N ALA A 197 SHEET 1 AA3 2 TYR B 3 GLU B 5 0 SHEET 2 AA3 2 GLU B 12 PRO B 14 -1 O ILE B 13 N LYS B 4 SHEET 1 AA4 8 LEU B 18 GLY B 19 0 SHEET 2 AA4 8 HIS B 51 ASP B 53 1 O ASP B 53 N LEU B 18 SHEET 3 AA4 8 PHE B 80 VAL B 85 1 O VAL B 82 N ILE B 52 SHEET 4 AA4 8 VAL B 111 ILE B 116 1 O LEU B 115 N VAL B 85 SHEET 5 AA4 8 ILE B 141 SER B 147 1 O TYR B 143 N TYR B 114 SHEET 6 AA4 8 ILE B 165 LYS B 171 1 O VAL B 166 N ILE B 144 SHEET 7 AA4 8 THR B 194 TYR B 198 1 O TYR B 198 N VAL B 170 SHEET 8 AA4 8 VAL B 239 ILE B 242 1 O VAL B 240 N ALA B 197 SITE 1 AC1 28 GLY A 19 THR A 20 TRP A 21 ASP A 53 SITE 2 AC1 28 TYR A 58 HIS A 117 SER A 147 ASN A 148 SITE 3 AC1 28 GLN A 169 TYR A 198 SER A 199 PRO A 200 SITE 4 AC1 28 LEU A 201 ARG A 202 ARG A 203 THR A 204 SITE 5 AC1 28 TYR A 226 ILE A 242 PRO A 243 LYS A 244 SITE 6 AC1 28 GLY A 246 ARG A 247 HIS A 250 GLU A 253 SITE 7 AC1 28 ASN A 254 EPR A 302 HOH A 437 HOH A 439 SITE 1 AC2 5 TYR A 58 HIS A 117 NAP A 301 HOH A 456 SITE 2 AC2 5 CL B 303 SITE 1 AC3 1 EPR B 302 SITE 1 AC4 4 TYR A 49 PRO A 243 ALA A 245 ASN A 254 SITE 1 AC5 27 GLY B 19 THR B 20 TRP B 21 ASP B 53 SITE 2 AC5 27 TYR B 58 HIS B 117 SER B 147 ASN B 148 SITE 3 AC5 27 GLN B 169 TYR B 198 SER B 199 PRO B 200 SITE 4 AC5 27 LEU B 201 ARG B 203 THR B 204 TYR B 226 SITE 5 AC5 27 ILE B 242 PRO B 243 LYS B 244 GLY B 246 SITE 6 AC5 27 ARG B 247 HIS B 250 GLU B 253 ASN B 254 SITE 7 AC5 27 EPR B 302 HOH B 419 HOH B 454 SITE 1 AC6 5 CL A 303 TYR B 58 HIS B 117 NAP B 301 SITE 2 AC6 5 HOH B 497 SITE 1 AC7 1 EPR A 302 SITE 1 AC8 2 ASN B 120 HOH B 500 SITE 1 AC9 1 MET B 1 CRYST1 84.128 84.128 185.765 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011887 0.006863 0.000000 0.00000 SCALE2 0.000000 0.013726 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005383 0.00000