HEADER TRANSFERASE 29-SEP-19 6L1L TITLE APO-BACF STRUCTURE FROM BACILLUS SUBTILLIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.6.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: B4417_2089; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMINOTRANSFERASE, PLP DEPENDENT ENZYME, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.BALASUBRAMANIAN,A.A.DESHMUKH REVDAT 2 22-NOV-23 6L1L 1 REMARK REVDAT 1 18-MAR-20 6L1L 0 JRNL AUTH A.DESHMUKH,B.GOPAL JRNL TITL STRUCTURAL INSIGHTS INTO THE CATALYTIC MECHANISM OF BACILLUS JRNL TITL 2 SUBTILIS BACF. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 76 145 2020 JRNL REFN ESSN 2053-230X JRNL PMID 32134000 JRNL DOI 10.1107/S2053230X20001636 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 53052 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2762 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3933 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 204 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5818 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.82000 REMARK 3 B22 (A**2) : -0.92000 REMARK 3 B33 (A**2) : 2.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.96000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.203 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.194 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.975 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6018 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5441 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8207 ; 1.504 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12462 ; 1.017 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 765 ; 6.292 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 261 ;34.787 ;23.946 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 839 ;15.183 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;16.954 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 888 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6964 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1433 ; 0.009 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6L1L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300013994. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55815 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 82.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2O1B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE TRIHYDRATE, 0.1M REMARK 280 SODIUM CACODYLATE TRIHYDRATE AT PH 6.5, 30% W/V POLYETHYLENE REMARK 280 GLYCOL 8000, MICROBATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.72000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 17 REMARK 465 SER A 18 REMARK 465 LEU A 19 REMARK 465 VAL A 20 REMARK 465 PHE A 21 REMARK 465 GLN A 22 REMARK 465 LYS A 23 REMARK 465 VAL A 24 REMARK 465 LYS A 25 REMARK 465 GLU A 26 REMARK 465 MET A 27 REMARK 465 GLU A 28 REMARK 465 LYS A 29 REMARK 465 THR A 30 REMARK 465 GLY A 31 REMARK 465 ALA A 32 REMARK 465 HIS A 33 REMARK 465 SER A 393 REMARK 465 LEU A 394 REMARK 465 GLN A 395 REMARK 465 GLU A 396 REMARK 465 THR A 397 REMARK 465 SER A 398 REMARK 465 ARG A 399 REMARK 465 LEU B 394 REMARK 465 GLN B 395 REMARK 465 GLU B 396 REMARK 465 THR B 397 REMARK 465 SER B 398 REMARK 465 ARG B 399 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ASP A 7 CG OD1 OD2 REMARK 470 LYS A 10 CE NZ REMARK 470 ARG A 14 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 15 CG CD OE1 NE2 REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 GLU A 198 CG CD OE1 OE2 REMARK 470 ASP A 215 CG OD1 OD2 REMARK 470 LYS A 217 CG CD CE NZ REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 GLN A 259 CG CD OE1 NE2 REMARK 470 GLU A 300 CG CD OE1 OE2 REMARK 470 LYS A 311 CG CD CE NZ REMARK 470 LYS A 316 CG CD CE NZ REMARK 470 LYS A 321 CG CD CE NZ REMARK 470 HIS A 349 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 356 CG CD OE1 OE2 REMARK 470 GLN A 374 CG CD OE1 NE2 REMARK 470 GLU A 375 CG CD OE1 OE2 REMARK 470 LYS A 386 CG CD CE NZ REMARK 470 MET B 1 CG SD CE REMARK 470 PRO B 5 CG CD REMARK 470 ASP B 7 CG OD1 OD2 REMARK 470 LYS B 10 CG CD CE NZ REMARK 470 LEU B 12 CG CD1 CD2 REMARK 470 ARG B 14 NE CZ NH1 NH2 REMARK 470 PHE B 17 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE B 21 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 22 CG CD OE1 NE2 REMARK 470 LYS B 23 CG CD CE NZ REMARK 470 LYS B 25 CG CD CE NZ REMARK 470 GLU B 28 CG CD OE1 OE2 REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 THR B 30 OG1 CG2 REMARK 470 GLU B 56 CG CD OE1 OE2 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 GLU B 141 CG CD OE1 OE2 REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 GLU B 166 CG CD OE1 OE2 REMARK 470 LYS B 167 CG CD CE NZ REMARK 470 LYS B 169 CG CD CE NZ REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 ASP B 215 CG OD1 OD2 REMARK 470 GLN B 216 CG CD OE1 NE2 REMARK 470 LYS B 217 CG CD CE NZ REMARK 470 LYS B 228 CG CD CE NZ REMARK 470 GLN B 259 CG CD OE1 NE2 REMARK 470 VAL B 270 CG1 CG2 REMARK 470 ARG B 296 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 300 CG CD OE1 OE2 REMARK 470 LYS B 311 CG CD CE NZ REMARK 470 GLU B 312 CG CD OE1 OE2 REMARK 470 LYS B 316 CG CD CE NZ REMARK 470 GLU B 318 CG CD OE1 OE2 REMARK 470 LYS B 321 CG CD CE NZ REMARK 470 GLU B 356 CG CD OE1 OE2 REMARK 470 LYS B 363 CG CD CE NZ REMARK 470 GLN B 374 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 161 109.81 -38.95 REMARK 500 ARG A 247 66.50 66.71 REMARK 500 THR A 323 175.70 60.51 REMARK 500 LYS A 386 1.72 -64.81 REMARK 500 THR B 30 -130.02 -77.92 REMARK 500 PHE B 212 66.90 -119.72 REMARK 500 ASP B 226 -6.53 80.72 REMARK 500 ARG B 247 63.90 64.58 REMARK 500 PHE B 269 -70.94 -132.79 REMARK 500 VAL B 270 35.93 72.08 REMARK 500 THR B 323 174.33 68.04 REMARK 500 ASN B 388 85.94 31.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PLP A 401 REMARK 610 PLP B 401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP B 401 DBREF1 6L1L A 1 399 UNP A0A164UM01_BACIU DBREF2 6L1L A A0A164UM01 1 399 DBREF1 6L1L B 1 399 UNP A0A164UM01_BACIU DBREF2 6L1L B A0A164UM01 1 399 SEQRES 1 A 399 MET GLU ILE THR PRO SER ASP VAL ILE LYS THR LEU PRO SEQRES 2 A 399 ARG GLN GLU PHE SER LEU VAL PHE GLN LYS VAL LYS GLU SEQRES 3 A 399 MET GLU LYS THR GLY ALA HIS ILE ILE ASN LEU GLY GLN SEQRES 4 A 399 GLY ASN PRO ASP LEU PRO THR PRO PRO HIS ILE VAL GLU SEQRES 5 A 399 ALA LEU ARG GLU ALA SER LEU ASN PRO SER PHE HIS GLY SEQRES 6 A 399 TYR GLY PRO PHE ARG GLY TYR PRO PHE LEU LYS GLU ALA SEQRES 7 A 399 ILE ALA ALA PHE TYR LYS ARG GLU TYR GLY VAL THR ILE SEQRES 8 A 399 ASN PRO GLU THR GLU VAL ALA LEU PHE GLY GLY GLY LYS SEQRES 9 A 399 ALA GLY LEU TYR VAL LEU THR GLN CYS LEU LEU ASN PRO SEQRES 10 A 399 GLY ASP ILE ALA LEU VAL PRO ASN PRO GLY TYR PRO GLU SEQRES 11 A 399 TYR LEU SER GLY ILE THR MET ALA ARG ALA GLU LEU TYR SEQRES 12 A 399 GLU MET PRO LEU TYR GLU GLU ASN GLY TYR LEU PRO ASP SEQRES 13 A 399 PHE GLU LYS ILE ASP PRO ALA VAL LEU GLU LYS ALA LYS SEQRES 14 A 399 LEU MET PHE LEU ASN TYR PRO ASN ASN PRO THR GLY ALA SEQRES 15 A 399 VAL ALA ASP ALA ALA PHE TYR ALA LYS ALA ALA ALA PHE SEQRES 16 A 399 ALA LYS GLU HIS ASN ILE HIS LEU ILE HIS ASP PHE ALA SEQRES 17 A 399 TYR GLY ALA PHE GLU PHE ASP GLN LYS PRO ALA SER PHE SEQRES 18 A 399 LEU GLU ALA GLU ASP ALA LYS THR VAL GLY ALA GLU LEU SEQRES 19 A 399 TYR SER PHE SER LYS THR PHE ASN MET ALA GLY TRP ARG SEQRES 20 A 399 MET ALA PHE ALA VAL GLY ASN GLU LYS ILE ILE GLN ALA SEQRES 21 A 399 VAL ASN GLU PHE GLN ASP HIS VAL PHE VAL GLY MET PHE SEQRES 22 A 399 GLY GLY LEU GLN GLN ALA ALA SER ALA ALA LEU SER GLY SEQRES 23 A 399 ASP PRO GLU HIS THR GLU SER LEU LYS ARG ILE TYR LYS SEQRES 24 A 399 GLU ARG ILE ASP PHE PHE THR ALA LEU CYS GLU LYS GLU SEQRES 25 A 399 LEU GLY TRP LYS MET GLU LYS PRO LYS GLY THR PHE TYR SEQRES 26 A 399 VAL TRP ALA GLU ILE PRO ASN THR PHE GLU THR SER HIS SEQRES 27 A 399 GLN PHE SER ASP TYR LEU LEU GLU HIS ALA HIS VAL VAL SEQRES 28 A 399 VAL THR PRO GLY GLU ILE PHE GLY SER ASN GLY LYS ARG SEQRES 29 A 399 HIS VAL ARG ILE SER MET VAL SER LYS GLN GLU ASP LEU SEQRES 30 A 399 ARG GLU PHE VAL THR ARG ILE GLN LYS LEU ASN LEU PRO SEQRES 31 A 399 PHE GLY SER LEU GLN GLU THR SER ARG SEQRES 1 B 399 MET GLU ILE THR PRO SER ASP VAL ILE LYS THR LEU PRO SEQRES 2 B 399 ARG GLN GLU PHE SER LEU VAL PHE GLN LYS VAL LYS GLU SEQRES 3 B 399 MET GLU LYS THR GLY ALA HIS ILE ILE ASN LEU GLY GLN SEQRES 4 B 399 GLY ASN PRO ASP LEU PRO THR PRO PRO HIS ILE VAL GLU SEQRES 5 B 399 ALA LEU ARG GLU ALA SER LEU ASN PRO SER PHE HIS GLY SEQRES 6 B 399 TYR GLY PRO PHE ARG GLY TYR PRO PHE LEU LYS GLU ALA SEQRES 7 B 399 ILE ALA ALA PHE TYR LYS ARG GLU TYR GLY VAL THR ILE SEQRES 8 B 399 ASN PRO GLU THR GLU VAL ALA LEU PHE GLY GLY GLY LYS SEQRES 9 B 399 ALA GLY LEU TYR VAL LEU THR GLN CYS LEU LEU ASN PRO SEQRES 10 B 399 GLY ASP ILE ALA LEU VAL PRO ASN PRO GLY TYR PRO GLU SEQRES 11 B 399 TYR LEU SER GLY ILE THR MET ALA ARG ALA GLU LEU TYR SEQRES 12 B 399 GLU MET PRO LEU TYR GLU GLU ASN GLY TYR LEU PRO ASP SEQRES 13 B 399 PHE GLU LYS ILE ASP PRO ALA VAL LEU GLU LYS ALA LYS SEQRES 14 B 399 LEU MET PHE LEU ASN TYR PRO ASN ASN PRO THR GLY ALA SEQRES 15 B 399 VAL ALA ASP ALA ALA PHE TYR ALA LYS ALA ALA ALA PHE SEQRES 16 B 399 ALA LYS GLU HIS ASN ILE HIS LEU ILE HIS ASP PHE ALA SEQRES 17 B 399 TYR GLY ALA PHE GLU PHE ASP GLN LYS PRO ALA SER PHE SEQRES 18 B 399 LEU GLU ALA GLU ASP ALA LYS THR VAL GLY ALA GLU LEU SEQRES 19 B 399 TYR SER PHE SER LYS THR PHE ASN MET ALA GLY TRP ARG SEQRES 20 B 399 MET ALA PHE ALA VAL GLY ASN GLU LYS ILE ILE GLN ALA SEQRES 21 B 399 VAL ASN GLU PHE GLN ASP HIS VAL PHE VAL GLY MET PHE SEQRES 22 B 399 GLY GLY LEU GLN GLN ALA ALA SER ALA ALA LEU SER GLY SEQRES 23 B 399 ASP PRO GLU HIS THR GLU SER LEU LYS ARG ILE TYR LYS SEQRES 24 B 399 GLU ARG ILE ASP PHE PHE THR ALA LEU CYS GLU LYS GLU SEQRES 25 B 399 LEU GLY TRP LYS MET GLU LYS PRO LYS GLY THR PHE TYR SEQRES 26 B 399 VAL TRP ALA GLU ILE PRO ASN THR PHE GLU THR SER HIS SEQRES 27 B 399 GLN PHE SER ASP TYR LEU LEU GLU HIS ALA HIS VAL VAL SEQRES 28 B 399 VAL THR PRO GLY GLU ILE PHE GLY SER ASN GLY LYS ARG SEQRES 29 B 399 HIS VAL ARG ILE SER MET VAL SER LYS GLN GLU ASP LEU SEQRES 30 B 399 ARG GLU PHE VAL THR ARG ILE GLN LYS LEU ASN LEU PRO SEQRES 31 B 399 PHE GLY SER LEU GLN GLU THR SER ARG HET PLP A 401 15 HET PLP B 401 15 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 PLP 2(C8 H10 N O6 P) FORMUL 5 HOH *268(H2 O) HELIX 1 AA1 PRO A 5 THR A 11 1 7 HELIX 2 AA2 PRO A 47 SER A 58 1 12 HELIX 3 AA3 LEU A 59 HIS A 64 5 6 HELIX 4 AA4 TYR A 72 GLY A 88 1 17 HELIX 5 AA5 GLY A 102 LEU A 115 1 14 HELIX 6 AA6 PRO A 129 ALA A 138 1 10 HELIX 7 AA7 TYR A 148 GLY A 152 5 5 HELIX 8 AA8 ASP A 156 ILE A 160 5 5 HELIX 9 AA9 ASP A 185 HIS A 199 1 15 HELIX 10 AB1 SER A 220 ALA A 224 5 5 HELIX 11 AB2 ASP A 226 VAL A 230 1 5 HELIX 12 AB3 MET A 243 ARG A 247 5 5 HELIX 13 AB4 ASN A 254 PHE A 269 1 16 HELIX 14 AB5 PHE A 273 GLY A 286 1 14 HELIX 15 AB6 PRO A 288 GLY A 314 1 27 HELIX 16 AB7 THR A 336 ALA A 348 1 13 HELIX 17 AB8 GLU A 356 LYS A 363 5 8 HELIX 18 AB9 LYS A 373 LYS A 386 1 14 HELIX 19 AC1 PRO B 5 LYS B 10 1 6 HELIX 20 AC2 ARG B 14 LYS B 29 1 16 HELIX 21 AC3 PRO B 47 SER B 58 1 12 HELIX 22 AC4 LEU B 59 HIS B 64 5 6 HELIX 23 AC5 TYR B 72 TYR B 87 1 16 HELIX 24 AC6 GLY B 102 CYS B 113 1 12 HELIX 25 AC7 TYR B 128 ALA B 138 1 11 HELIX 26 AC8 TYR B 148 GLY B 152 5 5 HELIX 27 AC9 ASP B 156 ILE B 160 5 5 HELIX 28 AD1 ASP B 161 LEU B 165 5 5 HELIX 29 AD2 ASP B 185 HIS B 199 1 15 HELIX 30 AD3 SER B 220 ALA B 224 5 5 HELIX 31 AD4 ASP B 226 VAL B 230 1 5 HELIX 32 AD5 PHE B 237 PHE B 241 1 5 HELIX 33 AD6 MET B 243 ARG B 247 5 5 HELIX 34 AD7 ASN B 254 PHE B 269 1 16 HELIX 35 AD8 PHE B 273 SER B 285 1 13 HELIX 36 AD9 PRO B 288 GLY B 314 1 27 HELIX 37 AE1 THR B 336 ALA B 348 1 13 HELIX 38 AE2 GLU B 356 LYS B 363 5 8 HELIX 39 AE3 LYS B 373 LYS B 386 1 14 SHEET 1 AA1 2 ILE A 35 ASN A 36 0 SHEET 2 AA1 2 VAL A 350 VAL A 351 1 O VAL A 351 N ILE A 35 SHEET 1 AA2 7 VAL A 97 PHE A 100 0 SHEET 2 AA2 7 ALA A 249 GLY A 253 -1 O ALA A 251 N ALA A 98 SHEET 3 AA2 7 GLY A 231 SER A 236 -1 N GLU A 233 O VAL A 252 SHEET 4 AA2 7 HIS A 202 ASP A 206 1 N HIS A 205 O ALA A 232 SHEET 5 AA2 7 ALA A 168 LEU A 173 1 N LEU A 173 O ASP A 206 SHEET 6 AA2 7 ILE A 120 ASN A 125 1 N LEU A 122 O LEU A 170 SHEET 7 AA2 7 GLU A 141 PRO A 146 1 O GLU A 141 N ALA A 121 SHEET 1 AA3 3 TYR A 325 GLU A 329 0 SHEET 2 AA3 3 HIS A 365 SER A 369 -1 O ILE A 368 N VAL A 326 SHEET 3 AA3 3 THR A 353 PRO A 354 -1 N THR A 353 O ARG A 367 SHEET 1 AA4 2 ILE B 35 ASN B 36 0 SHEET 2 AA4 2 VAL B 350 VAL B 351 1 O VAL B 351 N ILE B 35 SHEET 1 AA5 7 VAL B 97 PHE B 100 0 SHEET 2 AA5 7 ALA B 249 GLY B 253 -1 O ALA B 249 N PHE B 100 SHEET 3 AA5 7 GLY B 231 SER B 236 -1 N GLU B 233 O VAL B 252 SHEET 4 AA5 7 HIS B 202 ASP B 206 1 N HIS B 205 O LEU B 234 SHEET 5 AA5 7 ALA B 168 ASN B 174 1 N MET B 171 O ILE B 204 SHEET 6 AA5 7 ILE B 120 ASN B 125 1 N LEU B 122 O LEU B 170 SHEET 7 AA5 7 GLU B 141 PRO B 146 1 O MET B 145 N VAL B 123 SHEET 1 AA6 3 TYR B 325 GLU B 329 0 SHEET 2 AA6 3 HIS B 365 SER B 369 -1 O VAL B 366 N ALA B 328 SHEET 3 AA6 3 THR B 353 PRO B 354 -1 N THR B 353 O ARG B 367 CISPEP 1 ASN A 125 PRO A 126 0 6.30 CISPEP 2 TYR A 175 PRO A 176 0 -6.16 CISPEP 3 ASN A 178 PRO A 179 0 17.96 CISPEP 4 LYS B 29 THR B 30 0 -10.93 CISPEP 5 ASN B 125 PRO B 126 0 7.27 CISPEP 6 TYR B 175 PRO B 176 0 -9.40 CISPEP 7 ASN B 178 PRO B 179 0 14.60 SITE 1 AC1 12 GLY A 103 LYS A 104 TYR A 128 ASN A 174 SITE 2 AC1 12 ASN A 178 ASP A 206 TYR A 209 SER A 236 SITE 3 AC1 12 SER A 238 LYS A 239 ARG A 247 TYR B 66 SITE 1 AC2 12 TYR A 66 GLY B 103 LYS B 104 TYR B 128 SITE 2 AC2 12 ASN B 174 ASN B 178 ASP B 206 TYR B 209 SITE 3 AC2 12 SER B 236 SER B 238 LYS B 239 ARG B 247 CRYST1 73.220 59.440 84.230 90.00 101.78 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013658 0.000000 0.002848 0.00000 SCALE2 0.000000 0.016824 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012128 0.00000