HEADER TRANSFERASE 29-SEP-19 6L1N TITLE SUBSTRATE BOUND BACF STRUCTURE FROM BACILLUS SUBTILLIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.6.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: B4417_2089; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMINOTRANSFERASE, PLP DEPENDENT ENZYME, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.BALASUBRAMANIAN,A.A.DESHMUKH REVDAT 2 22-NOV-23 6L1N 1 REMARK REVDAT 1 18-MAR-20 6L1N 0 JRNL AUTH A.DESHMUKH,B.GOPAL JRNL TITL STRUCTURAL INSIGHTS INTO THE CATALYTIC MECHANISM OF BACILLUS JRNL TITL 2 SUBTILIS BACF. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 76 145 2020 JRNL REFN ESSN 2053-230X JRNL PMID 32134000 JRNL DOI 10.1107/S2053230X20001636 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 77.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2069 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2989 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2120 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5914 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 244 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.01000 REMARK 3 B22 (A**2) : 1.57000 REMARK 3 B33 (A**2) : -0.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.29000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.233 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.191 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.767 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6123 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5520 ; 0.007 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8345 ; 1.585 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12624 ; 1.036 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 782 ; 6.276 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 260 ;35.359 ;23.769 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 836 ;13.556 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;17.728 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 910 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7066 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1460 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6L1N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300014002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9840 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42411 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 77.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2O1B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 30.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE TRIHYDRATE, 0.1M REMARK 280 CACODYLATE TRIHYDRATE (PH= 6.5), 30% W/V POLYETHYLENE GLYCOL, REMARK 280 MICROBATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.45500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 28 REMARK 465 GLN A 395 REMARK 465 GLU A 396 REMARK 465 THR A 397 REMARK 465 SER A 398 REMARK 465 ARG A 399 REMARK 465 GLY B 31 REMARK 465 ALA B 32 REMARK 465 GLU B 396 REMARK 465 THR B 397 REMARK 465 SER B 398 REMARK 465 ARG B 399 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 2 OE2 REMARK 470 LYS A 10 CG CD CE NZ REMARK 470 LEU A 12 CG CD1 CD2 REMARK 470 ARG A 14 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 17 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 21 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 22 CG CD OE1 NE2 REMARK 470 LYS A 23 CG CD CE NZ REMARK 470 VAL A 24 CG1 CG2 REMARK 470 LYS A 25 CG CD CE NZ REMARK 470 MET A 27 CG SD CE REMARK 470 LYS A 29 CG CD CE NZ REMARK 470 THR A 30 OG1 CG2 REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 GLU A 198 CG CD OE1 OE2 REMARK 470 ASP A 215 CG OD1 OD2 REMARK 470 GLN A 216 CG CD OE1 NE2 REMARK 470 LYS A 217 CG CD CE NZ REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 GLN A 259 CG CD OE1 NE2 REMARK 470 GLU A 300 CG CD OE1 OE2 REMARK 470 LYS A 311 CG CD CE NZ REMARK 470 GLU A 312 CG CD OE1 OE2 REMARK 470 LYS A 316 CG CD CE NZ REMARK 470 GLU A 318 CG CD OE1 OE2 REMARK 470 LYS A 321 CG CD CE NZ REMARK 470 GLU A 356 CG CD OE1 OE2 REMARK 470 GLN A 374 CG CD OE1 NE2 REMARK 470 GLU A 375 CG CD OE1 OE2 REMARK 470 LYS A 386 CG CD CE NZ REMARK 470 MET B 1 CG SD CE REMARK 470 GLU B 2 OE2 REMARK 470 PRO B 5 CG CD REMARK 470 ASP B 7 OD1 OD2 REMARK 470 LYS B 10 CG CD CE NZ REMARK 470 ARG B 14 CZ NH1 NH2 REMARK 470 GLN B 15 CG CD OE1 NE2 REMARK 470 PHE B 17 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE B 21 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 22 CG CD OE1 NE2 REMARK 470 LYS B 23 CG CD CE NZ REMARK 470 VAL B 24 CG1 CG2 REMARK 470 LYS B 25 CG CD CE NZ REMARK 470 LYS B 29 CG CD CE NZ REMARK 470 THR B 30 OG1 CG2 REMARK 470 GLU B 56 CG CD OE1 OE2 REMARK 470 GLU B 77 CG CD OE1 OE2 REMARK 470 LYS B 84 CG CD CE NZ REMARK 470 GLU B 141 CG CD OE1 OE2 REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 GLU B 166 CG CD OE1 OE2 REMARK 470 LYS B 167 CG CD CE NZ REMARK 470 LYS B 169 CG CD CE NZ REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 ASP B 215 CG OD1 OD2 REMARK 470 GLN B 216 CG CD OE1 NE2 REMARK 470 LYS B 217 CG CD CE NZ REMARK 470 LYS B 228 CG CD CE NZ REMARK 470 GLN B 259 CG CD OE1 NE2 REMARK 470 GLU B 300 CG CD OE1 OE2 REMARK 470 LYS B 311 CG CD CE NZ REMARK 470 GLU B 312 CG CD OE1 OE2 REMARK 470 LYS B 316 CG CD CE NZ REMARK 470 GLU B 318 CG CD OE1 OE2 REMARK 470 LYS B 321 CG CD CE NZ REMARK 470 GLU B 356 CG CD OE1 OE2 REMARK 470 LYS B 363 CG CD CE NZ REMARK 470 GLN B 374 CG CD OE1 NE2 REMARK 470 GLU B 375 CG CD OE1 OE2 REMARK 470 LYS B 386 CG CD CE NZ REMARK 470 GLN B 395 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 14 92.24 -60.64 REMARK 500 THR A 30 -111.77 -86.99 REMARK 500 PHE A 212 73.40 -113.81 REMARK 500 GLN A 216 160.37 168.94 REMARK 500 ASP A 226 -11.83 76.81 REMARK 500 ARG A 247 66.38 66.77 REMARK 500 THR A 323 175.44 67.55 REMARK 500 GLU A 335 -140.03 -87.01 REMARK 500 ARG A 364 19.91 57.19 REMARK 500 ARG B 247 70.27 64.89 REMARK 500 VAL B 270 31.01 -70.07 REMARK 500 THR B 323 173.37 63.62 REMARK 500 PHE B 391 62.46 -100.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PLP A 402 REMARK 610 PLP B 401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLY B 402 DBREF1 6L1N A 1 399 UNP A0A164UM01_BACIU DBREF2 6L1N A A0A164UM01 1 399 DBREF1 6L1N B 1 399 UNP A0A164UM01_BACIU DBREF2 6L1N B A0A164UM01 1 399 SEQRES 1 A 399 MET GLU ILE THR PRO SER ASP VAL ILE LYS THR LEU PRO SEQRES 2 A 399 ARG GLN GLU PHE SER LEU VAL PHE GLN LYS VAL LYS GLU SEQRES 3 A 399 MET GLU LYS THR GLY ALA HIS ILE ILE ASN LEU GLY GLN SEQRES 4 A 399 GLY ASN PRO ASP LEU PRO THR PRO PRO HIS ILE VAL GLU SEQRES 5 A 399 ALA LEU ARG GLU ALA SER LEU ASN PRO SER PHE HIS GLY SEQRES 6 A 399 TYR GLY PRO PHE ARG GLY TYR PRO PHE LEU LYS GLU ALA SEQRES 7 A 399 ILE ALA ALA PHE TYR LYS ARG GLU TYR GLY VAL THR ILE SEQRES 8 A 399 ASN PRO GLU THR GLU VAL ALA LEU PHE GLY GLY GLY LYS SEQRES 9 A 399 ALA GLY LEU TYR VAL LEU THR GLN CYS LEU LEU ASN PRO SEQRES 10 A 399 GLY ASP ILE ALA LEU VAL PRO ASN PRO GLY TYR PRO GLU SEQRES 11 A 399 TYR LEU SER GLY ILE THR MET ALA ARG ALA GLU LEU TYR SEQRES 12 A 399 GLU MET PRO LEU TYR GLU GLU ASN GLY TYR LEU PRO ASP SEQRES 13 A 399 PHE GLU LYS ILE ASP PRO ALA VAL LEU GLU LYS ALA LYS SEQRES 14 A 399 LEU MET PHE LEU ASN TYR PRO ASN ASN PRO THR GLY ALA SEQRES 15 A 399 VAL ALA ASP ALA ALA PHE TYR ALA LYS ALA ALA ALA PHE SEQRES 16 A 399 ALA LYS GLU HIS ASN ILE HIS LEU ILE HIS ASP PHE ALA SEQRES 17 A 399 TYR GLY ALA PHE GLU PHE ASP GLN LYS PRO ALA SER PHE SEQRES 18 A 399 LEU GLU ALA GLU ASP ALA LYS THR VAL GLY ALA GLU LEU SEQRES 19 A 399 TYR SER PHE SER LYS THR PHE ASN MET ALA GLY TRP ARG SEQRES 20 A 399 MET ALA PHE ALA VAL GLY ASN GLU LYS ILE ILE GLN ALA SEQRES 21 A 399 VAL ASN GLU PHE GLN ASP HIS VAL PHE VAL GLY MET PHE SEQRES 22 A 399 GLY GLY LEU GLN GLN ALA ALA SER ALA ALA LEU SER GLY SEQRES 23 A 399 ASP PRO GLU HIS THR GLU SER LEU LYS ARG ILE TYR LYS SEQRES 24 A 399 GLU ARG ILE ASP PHE PHE THR ALA LEU CYS GLU LYS GLU SEQRES 25 A 399 LEU GLY TRP LYS MET GLU LYS PRO LYS GLY THR PHE TYR SEQRES 26 A 399 VAL TRP ALA GLU ILE PRO ASN THR PHE GLU THR SER HIS SEQRES 27 A 399 GLN PHE SER ASP TYR LEU LEU GLU HIS ALA HIS VAL VAL SEQRES 28 A 399 VAL THR PRO GLY GLU ILE PHE GLY SER ASN GLY LYS ARG SEQRES 29 A 399 HIS VAL ARG ILE SER MET VAL SER LYS GLN GLU ASP LEU SEQRES 30 A 399 ARG GLU PHE VAL THR ARG ILE GLN LYS LEU ASN LEU PRO SEQRES 31 A 399 PHE GLY SER LEU GLN GLU THR SER ARG SEQRES 1 B 399 MET GLU ILE THR PRO SER ASP VAL ILE LYS THR LEU PRO SEQRES 2 B 399 ARG GLN GLU PHE SER LEU VAL PHE GLN LYS VAL LYS GLU SEQRES 3 B 399 MET GLU LYS THR GLY ALA HIS ILE ILE ASN LEU GLY GLN SEQRES 4 B 399 GLY ASN PRO ASP LEU PRO THR PRO PRO HIS ILE VAL GLU SEQRES 5 B 399 ALA LEU ARG GLU ALA SER LEU ASN PRO SER PHE HIS GLY SEQRES 6 B 399 TYR GLY PRO PHE ARG GLY TYR PRO PHE LEU LYS GLU ALA SEQRES 7 B 399 ILE ALA ALA PHE TYR LYS ARG GLU TYR GLY VAL THR ILE SEQRES 8 B 399 ASN PRO GLU THR GLU VAL ALA LEU PHE GLY GLY GLY LYS SEQRES 9 B 399 ALA GLY LEU TYR VAL LEU THR GLN CYS LEU LEU ASN PRO SEQRES 10 B 399 GLY ASP ILE ALA LEU VAL PRO ASN PRO GLY TYR PRO GLU SEQRES 11 B 399 TYR LEU SER GLY ILE THR MET ALA ARG ALA GLU LEU TYR SEQRES 12 B 399 GLU MET PRO LEU TYR GLU GLU ASN GLY TYR LEU PRO ASP SEQRES 13 B 399 PHE GLU LYS ILE ASP PRO ALA VAL LEU GLU LYS ALA LYS SEQRES 14 B 399 LEU MET PHE LEU ASN TYR PRO ASN ASN PRO THR GLY ALA SEQRES 15 B 399 VAL ALA ASP ALA ALA PHE TYR ALA LYS ALA ALA ALA PHE SEQRES 16 B 399 ALA LYS GLU HIS ASN ILE HIS LEU ILE HIS ASP PHE ALA SEQRES 17 B 399 TYR GLY ALA PHE GLU PHE ASP GLN LYS PRO ALA SER PHE SEQRES 18 B 399 LEU GLU ALA GLU ASP ALA LYS THR VAL GLY ALA GLU LEU SEQRES 19 B 399 TYR SER PHE SER LYS THR PHE ASN MET ALA GLY TRP ARG SEQRES 20 B 399 MET ALA PHE ALA VAL GLY ASN GLU LYS ILE ILE GLN ALA SEQRES 21 B 399 VAL ASN GLU PHE GLN ASP HIS VAL PHE VAL GLY MET PHE SEQRES 22 B 399 GLY GLY LEU GLN GLN ALA ALA SER ALA ALA LEU SER GLY SEQRES 23 B 399 ASP PRO GLU HIS THR GLU SER LEU LYS ARG ILE TYR LYS SEQRES 24 B 399 GLU ARG ILE ASP PHE PHE THR ALA LEU CYS GLU LYS GLU SEQRES 25 B 399 LEU GLY TRP LYS MET GLU LYS PRO LYS GLY THR PHE TYR SEQRES 26 B 399 VAL TRP ALA GLU ILE PRO ASN THR PHE GLU THR SER HIS SEQRES 27 B 399 GLN PHE SER ASP TYR LEU LEU GLU HIS ALA HIS VAL VAL SEQRES 28 B 399 VAL THR PRO GLY GLU ILE PHE GLY SER ASN GLY LYS ARG SEQRES 29 B 399 HIS VAL ARG ILE SER MET VAL SER LYS GLN GLU ASP LEU SEQRES 30 B 399 ARG GLU PHE VAL THR ARG ILE GLN LYS LEU ASN LEU PRO SEQRES 31 B 399 PHE GLY SER LEU GLN GLU THR SER ARG HET GLY A 401 5 HET PLP A 402 15 HET PLP B 401 15 HET GLY B 402 5 HETNAM GLY GLYCINE HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 GLY 2(C2 H5 N O2) FORMUL 4 PLP 2(C8 H10 N O6 P) FORMUL 7 HOH *244(H2 O) HELIX 1 AA1 PRO A 5 ILE A 9 5 5 HELIX 2 AA2 ARG A 14 GLU A 26 1 13 HELIX 3 AA3 PRO A 47 SER A 58 1 12 HELIX 4 AA4 LEU A 59 HIS A 64 5 6 HELIX 5 AA5 TYR A 72 GLY A 88 1 17 HELIX 6 AA6 GLY A 102 LEU A 115 1 14 HELIX 7 AA7 GLU A 130 ALA A 138 1 9 HELIX 8 AA8 TYR A 148 GLY A 152 5 5 HELIX 9 AA9 ASP A 156 ILE A 160 5 5 HELIX 10 AB1 ASP A 161 LYS A 167 1 7 HELIX 11 AB2 ASP A 185 HIS A 199 1 15 HELIX 12 AB3 SER A 220 ALA A 224 5 5 HELIX 13 AB4 ASP A 226 VAL A 230 1 5 HELIX 14 AB5 PHE A 237 PHE A 241 1 5 HELIX 15 AB6 MET A 243 ARG A 247 5 5 HELIX 16 AB7 ASN A 254 ASP A 266 1 13 HELIX 17 AB8 PHE A 273 GLY A 286 1 14 HELIX 18 AB9 PRO A 288 GLY A 314 1 27 HELIX 19 AC1 THR A 336 ALA A 348 1 13 HELIX 20 AC2 GLU A 356 LYS A 363 5 8 HELIX 21 AC3 LYS A 373 LEU A 387 1 15 HELIX 22 AC4 PRO B 5 THR B 11 1 7 HELIX 23 AC5 ARG B 14 LYS B 29 1 16 HELIX 24 AC6 PRO B 47 SER B 58 1 12 HELIX 25 AC7 LEU B 59 HIS B 64 5 6 HELIX 26 AC8 TYR B 72 GLY B 88 1 17 HELIX 27 AC9 GLY B 102 LEU B 115 1 14 HELIX 28 AD1 TYR B 128 ALA B 138 1 11 HELIX 29 AD2 TYR B 148 GLY B 152 5 5 HELIX 30 AD3 ASP B 156 ILE B 160 5 5 HELIX 31 AD4 ASP B 161 LYS B 167 1 7 HELIX 32 AD5 ASP B 185 ASN B 200 1 16 HELIX 33 AD6 SER B 220 ALA B 224 5 5 HELIX 34 AD7 ASP B 226 VAL B 230 1 5 HELIX 35 AD8 PHE B 237 PHE B 241 1 5 HELIX 36 AD9 MET B 243 ARG B 247 5 5 HELIX 37 AE1 ASN B 254 ASP B 266 1 13 HELIX 38 AE2 PHE B 273 GLY B 286 1 14 HELIX 39 AE3 ASP B 287 GLY B 314 1 28 HELIX 40 AE4 THR B 336 HIS B 349 1 14 HELIX 41 AE5 GLU B 356 LYS B 363 5 8 HELIX 42 AE6 LYS B 373 LYS B 386 1 14 SHEET 1 AA1 2 ILE A 35 ASN A 36 0 SHEET 2 AA1 2 VAL A 350 VAL A 351 1 O VAL A 351 N ILE A 35 SHEET 1 AA2 7 VAL A 97 PHE A 100 0 SHEET 2 AA2 7 ALA A 249 GLY A 253 -1 O ALA A 251 N ALA A 98 SHEET 3 AA2 7 GLY A 231 SER A 236 -1 N TYR A 235 O PHE A 250 SHEET 4 AA2 7 HIS A 202 ASP A 206 1 N HIS A 205 O LEU A 234 SHEET 5 AA2 7 ALA A 168 ASN A 174 1 N LEU A 173 O ASP A 206 SHEET 6 AA2 7 ILE A 120 ASN A 125 1 N LEU A 122 O LEU A 170 SHEET 7 AA2 7 GLU A 141 PRO A 146 1 O MET A 145 N VAL A 123 SHEET 1 AA3 3 TYR A 325 GLU A 329 0 SHEET 2 AA3 3 HIS A 365 SER A 369 -1 O ILE A 368 N VAL A 326 SHEET 3 AA3 3 THR A 353 PRO A 354 -1 N THR A 353 O ARG A 367 SHEET 1 AA4 2 ILE B 35 ASN B 36 0 SHEET 2 AA4 2 VAL B 350 VAL B 351 1 O VAL B 351 N ILE B 35 SHEET 1 AA5 7 VAL B 97 PHE B 100 0 SHEET 2 AA5 7 ALA B 249 GLY B 253 -1 O ALA B 251 N ALA B 98 SHEET 3 AA5 7 GLY B 231 SER B 236 -1 N GLU B 233 O VAL B 252 SHEET 4 AA5 7 HIS B 202 ASP B 206 1 N HIS B 205 O LEU B 234 SHEET 5 AA5 7 ALA B 168 LEU B 173 1 N LEU B 173 O ASP B 206 SHEET 6 AA5 7 ILE B 120 ASN B 125 1 N LEU B 122 O LEU B 170 SHEET 7 AA5 7 GLU B 141 PRO B 146 1 O GLU B 141 N ALA B 121 SHEET 1 AA6 3 TYR B 325 GLU B 329 0 SHEET 2 AA6 3 HIS B 365 SER B 369 -1 O ILE B 368 N VAL B 326 SHEET 3 AA6 3 THR B 353 PRO B 354 -1 N THR B 353 O ARG B 367 CISPEP 1 LYS A 29 THR A 30 0 -16.35 CISPEP 2 ASN A 125 PRO A 126 0 11.64 CISPEP 3 TYR A 175 PRO A 176 0 -10.56 CISPEP 4 ASN A 178 PRO A 179 0 8.44 CISPEP 5 ASN B 125 PRO B 126 0 12.73 CISPEP 6 TYR B 175 PRO B 176 0 -8.39 CISPEP 7 ASN B 178 PRO B 179 0 18.39 SITE 1 AC1 9 GLU A 16 GLY A 40 TYR A 128 ASN A 178 SITE 2 AC1 9 TYR A 209 LYS A 239 TYR A 325 ARG A 367 SITE 3 AC1 9 PLP A 402 SITE 1 AC2 13 GLY A 103 LYS A 104 TYR A 128 ASN A 174 SITE 2 AC2 13 ASN A 178 ASP A 206 TYR A 209 SER A 236 SITE 3 AC2 13 SER A 238 LYS A 239 ARG A 247 GLY A 401 SITE 4 AC2 13 TYR B 66 SITE 1 AC3 13 TYR A 66 GLY B 103 LYS B 104 TYR B 128 SITE 2 AC3 13 ASN B 174 ASN B 178 ASP B 206 TYR B 209 SITE 3 AC3 13 SER B 236 SER B 238 LYS B 239 ARG B 247 SITE 4 AC3 13 GLY B 402 SITE 1 AC4 6 TYR A 66 GLY B 40 ASN B 178 TYR B 325 SITE 2 AC4 6 ARG B 367 PLP B 401 CRYST1 71.290 56.910 78.500 90.00 97.86 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014027 0.000000 0.001936 0.00000 SCALE2 0.000000 0.017572 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012860 0.00000