HEADER OXIDOREDUCTASE 10-OCT-19 6L39 TITLE CYTOCHROME P450 107G1 (RAPN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RAPN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES RAPAMYCINICUS (STRAIN ATCC 29253 / SOURCE 3 DSM 41530 / NRRL 5491 / AYB-994); SOURCE 4 ORGANISM_TAXID: 1343740; SOURCE 5 STRAIN: ATCC 29253 / DSM 41530 / NRRL 5491 / AYB-994; SOURCE 6 GENE: D3C57_102975; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A+ KEYWDS CYTOCHROME P450, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR V.C.KIM,D.H.KIM,Y.R.LIM,I.H.LEE,J.H.LEE,L.W.KANG REVDAT 2 22-NOV-23 6L39 1 REMARK REVDAT 1 16-SEP-20 6L39 0 JRNL AUTH V.KIM,Y.R.LIM,I.LEE,J.H.LEE,S.HAN,T.V.PHAM,H.KIM,R.LEE, JRNL AUTH 2 L.W.KANG,D.KIM JRNL TITL STRUCTURAL INSIGHTS INTO CYP107G1 FROM RAPAMYCIN-PRODUCING JRNL TITL 2 STREPTOMYCES RAPAMYCINICUS. JRNL REF ARCH.BIOCHEM.BIOPHYS. V. 692 08544 2020 JRNL REFN ESSN 1096-0384 JRNL PMID 32822639 JRNL DOI 10.1016/J.ABB.2020.108544 REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 13728 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.313 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.800 REMARK 3 FREE R VALUE TEST SET COUNT : 997 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 734 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5915 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 4 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.398 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.630 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.000 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.017 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.837 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6L39 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300014083. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97940 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39493 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4Z5P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE PH 8.0 1 M SODIUM REMARK 280 CITRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.89900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 THR A 4 REMARK 465 ASP A 5 REMARK 465 GLN A 6 REMARK 465 GLY A 7 REMARK 465 GLU A 8 REMARK 465 THR A 9 REMARK 465 GLY A 10 REMARK 465 LYS A 11 REMARK 465 ASP A 86 REMARK 465 LEU A 176 REMARK 465 SER A 177 REMARK 465 ASN A 178 REMARK 465 ASP A 208 REMARK 465 THR A 209 REMARK 465 ALA A 219 REMARK 465 ARG A 220 REMARK 465 ASP A 221 REMARK 465 LYS A 222 REMARK 465 ASP A 223 REMARK 465 ASP A 224 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 THR B 3 REMARK 465 THR B 4 REMARK 465 ASP B 5 REMARK 465 GLN B 6 REMARK 465 GLY B 7 REMARK 465 GLU B 8 REMARK 465 THR B 9 REMARK 465 GLY B 10 REMARK 465 LYS B 11 REMARK 465 GLN B 85 REMARK 465 ASP B 86 REMARK 465 LEU B 176 REMARK 465 SER B 177 REMARK 465 ASN B 178 REMARK 465 GLY B 179 REMARK 465 ALA B 180 REMARK 465 ASP B 208 REMARK 465 THR B 209 REMARK 465 ASN B 210 REMARK 465 ASP B 211 REMARK 465 ARG B 220 REMARK 465 ASP B 221 REMARK 465 LYS B 222 REMARK 465 ASP B 223 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 LEU A 81 CG CD1 CD2 REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 ASN A 210 CG OD1 ND2 REMARK 470 GLU A 262 CG CD OE1 OE2 REMARK 470 GLU A 299 CG CD OE1 OE2 REMARK 470 CYS B 13 SG REMARK 470 LEU B 32 CG CD1 CD2 REMARK 470 GLU B 37 CG CD OE1 OE2 REMARK 470 ILE B 90 CG1 CG2 CD1 REMARK 470 MET B 91 CG SD CE REMARK 470 LEU B 239 CG CD1 CD2 REMARK 470 LEU B 358 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB SER B 292 O2 PO4 B 503 1.65 REMARK 500 NH1 ARG A 22 OE2 GLU A 383 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 19 108.56 -56.10 REMARK 500 MET A 20 89.10 -61.32 REMARK 500 ARG A 22 -139.22 71.63 REMARK 500 TYR A 29 -58.44 -25.68 REMARK 500 ALA A 35 -8.15 -55.97 REMARK 500 ALA A 71 21.69 -73.80 REMARK 500 PRO A 78 102.00 -48.63 REMARK 500 LEU A 104 -70.56 -69.05 REMARK 500 ASP A 130 -62.80 -29.58 REMARK 500 LYS A 135 -132.67 -96.75 REMARK 500 ALA A 137 -77.47 -70.72 REMARK 500 PHE A 145 -47.53 -154.20 REMARK 500 ILE A 162 -9.18 -51.11 REMARK 500 PHE A 168 -74.96 -45.59 REMARK 500 GLU A 203 51.39 -91.50 REMARK 500 ARG A 204 -18.65 -159.07 REMARK 500 ASP A 211 -152.50 -94.37 REMARK 500 TYR A 243 -69.89 -102.58 REMARK 500 HIS A 260 59.36 -156.54 REMARK 500 THR A 323 27.23 -143.35 REMARK 500 GLU A 332 30.97 -84.67 REMARK 500 ASP A 335 113.01 -175.77 REMARK 500 ALA A 356 -55.35 -25.43 REMARK 500 LEU A 370 -53.70 -26.95 REMARK 500 PRO A 375 1.12 -69.42 REMARK 500 MET B 20 74.26 63.08 REMARK 500 GLU B 21 -71.58 -54.11 REMARK 500 ARG B 22 -112.20 -86.54 REMARK 500 ALA B 35 -4.65 -57.48 REMARK 500 PHE B 145 -57.44 -146.90 REMARK 500 ILE B 162 -18.96 -37.00 REMARK 500 THR B 170 -56.13 -26.56 REMARK 500 GLN B 183 -37.92 -38.51 REMARK 500 TYR B 243 -85.35 -106.55 REMARK 500 GLN B 290 -161.94 -108.07 REMARK 500 ALA B 291 -102.39 -74.72 REMARK 500 GLU B 299 121.25 101.78 REMARK 500 VAL B 308 97.63 -62.96 REMARK 500 SER B 340 103.44 -160.19 REMARK 500 ALA B 356 -51.84 -27.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 353 SG REMARK 620 2 HEM A 501 NA 98.7 REMARK 620 3 HEM A 501 NB 88.1 87.2 REMARK 620 4 HEM A 501 NC 83.9 174.4 87.9 REMARK 620 5 HEM A 501 ND 94.0 93.0 177.8 91.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 353 SG REMARK 620 2 HEM B 501 NA 94.5 REMARK 620 3 HEM B 501 NB 76.7 88.3 REMARK 620 4 HEM B 501 NC 80.2 173.3 86.5 REMARK 620 5 HEM B 501 ND 99.8 93.2 176.3 91.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 503 DBREF1 6L39 A 1 404 UNP A0A0A0NSZ7_STRRN DBREF2 6L39 A A0A0A0NSZ7 1 404 DBREF1 6L39 B 1 404 UNP A0A0A0NSZ7_STRRN DBREF2 6L39 B A0A0A0NSZ7 1 404 SEQRES 1 A 404 MET SER THR THR ASP GLN GLY GLU THR GLY LYS ALA CYS SEQRES 2 A 404 PRO TYR PRO PHE ALA GLU MET GLU ARG LEU GLU ILE HIS SEQRES 3 A 404 PRO GLU TYR ASN ARG LEU ARG ASP ALA GLY GLU LEU GLY SEQRES 4 A 404 ARG VAL LEU MET PRO TYR GLY GLY GLU THR TRP LEU ALA SEQRES 5 A 404 THR SER TRP GLU ASP VAL ALA LYS VAL PHE VAL ASP PRO SEQRES 6 A 404 ARG PHE SER ARG SER ALA THR LEU GLY LYS ASP VAL PRO SEQRES 7 A 404 ARG VAL LEU PRO ALA ILE GLN ASP GLN PRO VAL ILE MET SEQRES 8 A 404 LEU MET ASP PRO PRO GLU HIS THR ARG LEU ARG ARG LEU SEQRES 9 A 404 ALA THR LYS ALA LEU THR SER ARG ARG MET GLU ALA LEU SEQRES 10 A 404 ARG PRO ARG THR GLN GLU VAL ALA ASP ASP LEU ILE ASP SEQRES 11 A 404 LYS MET LEU ALA LYS GLY ALA PRO ALA ASP LEU MET GLU SEQRES 12 A 404 ASP PHE ALA LEU PRO LEU PRO ILE ILE MET ILE CYS GLU SEQRES 13 A 404 LEU LEU GLY VAL PRO ILE GLU ASP GLN THR LYS PHE ARG SEQRES 14 A 404 THR TRP SER ASP GLN MET LEU SER ASN GLY ALA TYR SER SEQRES 15 A 404 GLN GLU VAL VAL MET ALA ALA GLY GLN SER LEU TYR LEU SEQRES 16 A 404 TYR LEU SER GLU LEU ILE ALA GLU ARG ARG LYS GLN ASP SEQRES 17 A 404 THR ASN ASP LEU LEU GLY SER LEU VAL ARG ALA ARG ASP SEQRES 18 A 404 LYS ASP ASP ARG LEU SER GLU THR GLU LEU VAL GLY PHE SEQRES 19 A 404 ALA VAL THR LEU LEU ILE ALA GLY TYR GLU THR THR ALA SEQRES 20 A 404 ASN ALA ILE GLY ASN SER VAL TYR THR LEU LEU THR HIS SEQRES 21 A 404 PRO GLU LYS LEU ALA GLU LEU ARG LYS ASP LEU SER LEU SEQRES 22 A 404 ILE PRO LYS ALA VAL ASP GLU LEU LEU ARG ILE ILE PRO SEQRES 23 A 404 ILE ALA LYS GLN ALA SER TRP VAL ARG MET ALA VAL GLU SEQRES 24 A 404 ASP VAL GLU LEU SER GLY THR ILE VAL LYS ALA GLY GLU SEQRES 25 A 404 ALA VAL ALA ILE GLN THR HIS SER ALA ASN THR ASP PRO SEQRES 26 A 404 LYS VAL TYR ASP HIS PRO GLU GLU ILE ASP PHE HIS ARG SEQRES 27 A 404 THR SER ASN PRO HIS MET SER LEU GLY HIS GLY ALA HIS SEQRES 28 A 404 HIS CYS MET GLY ALA GLN LEU VAL ARG VAL GLU MET GLN SEQRES 29 A 404 THR ALA LEU GLY SER LEU ILE SER ARG ILE PRO ALA LEU SEQRES 30 A 404 ARG PHE ALA VAL PRO GLU PRO ARG ILE LYS PHE LEU ARG SEQRES 31 A 404 GLY ARG LEU VAL PRO SER LEU GLU ALA LEU PRO LEU THR SEQRES 32 A 404 TRP SEQRES 1 B 404 MET SER THR THR ASP GLN GLY GLU THR GLY LYS ALA CYS SEQRES 2 B 404 PRO TYR PRO PHE ALA GLU MET GLU ARG LEU GLU ILE HIS SEQRES 3 B 404 PRO GLU TYR ASN ARG LEU ARG ASP ALA GLY GLU LEU GLY SEQRES 4 B 404 ARG VAL LEU MET PRO TYR GLY GLY GLU THR TRP LEU ALA SEQRES 5 B 404 THR SER TRP GLU ASP VAL ALA LYS VAL PHE VAL ASP PRO SEQRES 6 B 404 ARG PHE SER ARG SER ALA THR LEU GLY LYS ASP VAL PRO SEQRES 7 B 404 ARG VAL LEU PRO ALA ILE GLN ASP GLN PRO VAL ILE MET SEQRES 8 B 404 LEU MET ASP PRO PRO GLU HIS THR ARG LEU ARG ARG LEU SEQRES 9 B 404 ALA THR LYS ALA LEU THR SER ARG ARG MET GLU ALA LEU SEQRES 10 B 404 ARG PRO ARG THR GLN GLU VAL ALA ASP ASP LEU ILE ASP SEQRES 11 B 404 LYS MET LEU ALA LYS GLY ALA PRO ALA ASP LEU MET GLU SEQRES 12 B 404 ASP PHE ALA LEU PRO LEU PRO ILE ILE MET ILE CYS GLU SEQRES 13 B 404 LEU LEU GLY VAL PRO ILE GLU ASP GLN THR LYS PHE ARG SEQRES 14 B 404 THR TRP SER ASP GLN MET LEU SER ASN GLY ALA TYR SER SEQRES 15 B 404 GLN GLU VAL VAL MET ALA ALA GLY GLN SER LEU TYR LEU SEQRES 16 B 404 TYR LEU SER GLU LEU ILE ALA GLU ARG ARG LYS GLN ASP SEQRES 17 B 404 THR ASN ASP LEU LEU GLY SER LEU VAL ARG ALA ARG ASP SEQRES 18 B 404 LYS ASP ASP ARG LEU SER GLU THR GLU LEU VAL GLY PHE SEQRES 19 B 404 ALA VAL THR LEU LEU ILE ALA GLY TYR GLU THR THR ALA SEQRES 20 B 404 ASN ALA ILE GLY ASN SER VAL TYR THR LEU LEU THR HIS SEQRES 21 B 404 PRO GLU LYS LEU ALA GLU LEU ARG LYS ASP LEU SER LEU SEQRES 22 B 404 ILE PRO LYS ALA VAL ASP GLU LEU LEU ARG ILE ILE PRO SEQRES 23 B 404 ILE ALA LYS GLN ALA SER TRP VAL ARG MET ALA VAL GLU SEQRES 24 B 404 ASP VAL GLU LEU SER GLY THR ILE VAL LYS ALA GLY GLU SEQRES 25 B 404 ALA VAL ALA ILE GLN THR HIS SER ALA ASN THR ASP PRO SEQRES 26 B 404 LYS VAL TYR ASP HIS PRO GLU GLU ILE ASP PHE HIS ARG SEQRES 27 B 404 THR SER ASN PRO HIS MET SER LEU GLY HIS GLY ALA HIS SEQRES 28 B 404 HIS CYS MET GLY ALA GLN LEU VAL ARG VAL GLU MET GLN SEQRES 29 B 404 THR ALA LEU GLY SER LEU ILE SER ARG ILE PRO ALA LEU SEQRES 30 B 404 ARG PHE ALA VAL PRO GLU PRO ARG ILE LYS PHE LEU ARG SEQRES 31 B 404 GLY ARG LEU VAL PRO SER LEU GLU ALA LEU PRO LEU THR SEQRES 32 B 404 TRP HET HEM A 501 43 HET PEG A 502 7 HET PEG A 503 7 HET HEM B 501 43 HET PO4 B 502 5 HET PO4 B 503 5 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PO4 PHOSPHATE ION HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 PEG 2(C4 H10 O3) FORMUL 7 PO4 2(O4 P 3-) FORMUL 9 HOH *4(H2 O) HELIX 1 AA1 PRO A 27 ALA A 35 1 9 HELIX 2 AA2 SER A 54 ASP A 64 1 11 HELIX 3 AA3 ARG A 69 LEU A 73 5 5 HELIX 4 AA4 VAL A 89 MET A 93 5 5 HELIX 5 AA5 PRO A 96 THR A 106 1 11 HELIX 6 AA6 THR A 110 ALA A 116 1 7 HELIX 7 AA7 LEU A 117 LYS A 135 1 19 HELIX 8 AA8 LEU A 141 PHE A 145 1 5 HELIX 9 AA9 LEU A 147 GLY A 159 1 13 HELIX 10 AB1 ASP A 164 GLN A 174 1 11 HELIX 11 AB2 SER A 182 VAL A 185 5 4 HELIX 12 AB3 VAL A 186 GLU A 203 1 18 HELIX 13 AB4 ASP A 211 VAL A 217 1 7 HELIX 14 AB5 SER A 227 GLY A 242 1 16 HELIX 15 AB6 TYR A 243 THR A 259 1 17 HELIX 16 AB7 HIS A 260 ASP A 270 1 11 HELIX 17 AB8 LEU A 273 ILE A 285 1 13 HELIX 18 AB9 GLN A 317 ASN A 322 1 6 HELIX 19 AC1 HIS A 348 HIS A 352 5 5 HELIX 20 AC2 GLY A 355 ILE A 374 1 20 HELIX 21 AC3 PRO A 382 ILE A 386 5 5 HELIX 22 AC4 PRO B 27 ASP B 34 1 8 HELIX 23 AC5 SER B 54 ASP B 64 1 11 HELIX 24 AC6 ARG B 69 LEU B 73 5 5 HELIX 25 AC7 VAL B 89 MET B 93 5 5 HELIX 26 AC8 PRO B 96 LYS B 107 1 12 HELIX 27 AC9 THR B 110 ALA B 116 1 7 HELIX 28 AD1 LEU B 117 LYS B 135 1 19 HELIX 29 AD2 LEU B 141 PHE B 145 1 5 HELIX 30 AD3 LEU B 147 LEU B 158 1 12 HELIX 31 AD4 GLU B 163 ASP B 173 1 11 HELIX 32 AD5 SER B 182 ARG B 204 1 23 HELIX 33 AD6 GLY B 214 ALA B 219 1 6 HELIX 34 AD7 GLU B 228 TYR B 243 1 16 HELIX 35 AD8 TYR B 243 THR B 259 1 17 HELIX 36 AD9 HIS B 260 ASP B 270 1 11 HELIX 37 AE1 LEU B 273 ILE B 285 1 13 HELIX 38 AE2 GLN B 317 ASN B 322 1 6 HELIX 39 AE3 HIS B 348 HIS B 352 5 5 HELIX 40 AE4 GLY B 355 ILE B 374 1 20 HELIX 41 AE5 PRO B 382 ILE B 386 5 5 SHEET 1 AA1 5 GLY A 39 LEU A 42 0 SHEET 2 AA1 5 GLU A 48 ALA A 52 -1 O THR A 49 N VAL A 41 SHEET 3 AA1 5 ALA A 313 ILE A 316 1 O ALA A 313 N TRP A 50 SHEET 4 AA1 5 ARG A 295 ALA A 297 -1 N ARG A 295 O VAL A 314 SHEET 5 AA1 5 PHE A 67 SER A 68 -1 N SER A 68 O MET A 296 SHEET 1 AA2 3 ALA A 139 ASP A 140 0 SHEET 2 AA2 3 PRO A 401 THR A 403 -1 O LEU A 402 N ALA A 139 SHEET 3 AA2 3 ARG A 378 PHE A 379 -1 N ARG A 378 O THR A 403 SHEET 1 AA3 2 VAL A 301 LEU A 303 0 SHEET 2 AA3 2 THR A 306 VAL A 308 -1 O VAL A 308 N VAL A 301 SHEET 1 AA4 6 CYS B 13 PRO B 14 0 SHEET 2 AA4 6 GLY B 39 LEU B 42 1 O LEU B 42 N CYS B 13 SHEET 3 AA4 6 GLU B 48 ALA B 52 -1 O THR B 49 N VAL B 41 SHEET 4 AA4 6 ALA B 313 ILE B 316 1 O ALA B 313 N TRP B 50 SHEET 5 AA4 6 ARG B 295 ALA B 297 -1 N ARG B 295 O VAL B 314 SHEET 6 AA4 6 PHE B 67 SER B 68 -1 N SER B 68 O MET B 296 SHEET 1 AA5 3 ALA B 139 ASP B 140 0 SHEET 2 AA5 3 PRO B 401 THR B 403 -1 O LEU B 402 N ALA B 139 SHEET 3 AA5 3 ARG B 378 PHE B 379 -1 N ARG B 378 O THR B 403 SHEET 1 AA6 2 VAL B 301 LEU B 303 0 SHEET 2 AA6 2 THR B 306 VAL B 308 -1 O VAL B 308 N VAL B 301 LINK SG CYS A 353 FE HEM A 501 1555 1555 2.46 LINK SG CYS B 353 FE HEM B 501 1555 1555 2.46 CISPEP 1 TYR A 15 PRO A 16 0 -18.45 CISPEP 2 PRO A 95 PRO A 96 0 -0.69 CISPEP 3 TYR B 15 PRO B 16 0 -7.80 CISPEP 4 PRO B 95 PRO B 96 0 5.86 CISPEP 5 ALA B 137 PRO B 138 0 6.32 SITE 1 AC1 19 PHE A 62 ARG A 69 HIS A 98 ARG A 102 SITE 2 AC1 19 LEU A 238 ALA A 241 GLY A 242 THR A 245 SITE 3 AC1 19 THR A 246 ARG A 295 SER A 345 LEU A 346 SITE 4 AC1 19 GLY A 347 HIS A 351 HIS A 352 CYS A 353 SITE 5 AC1 19 MET A 354 VAL A 359 PEG A 502 SITE 1 AC2 3 MET A 91 VAL A 394 HEM A 501 SITE 1 AC3 17 PHE B 62 ARG B 69 HIS B 98 ARG B 102 SITE 2 AC3 17 LEU B 238 GLY B 242 THR B 246 ILE B 287 SITE 3 AC3 17 ARG B 295 SER B 345 LEU B 346 GLY B 347 SITE 4 AC3 17 HIS B 351 CYS B 353 MET B 354 VAL B 359 SITE 5 AC3 17 PO4 B 502 SITE 1 AC4 3 ALA B 241 THR B 245 HEM B 501 SITE 1 AC5 4 ILE B 287 ALA B 291 SER B 292 THR B 318 CRYST1 59.978 99.798 62.684 90.00 89.82 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016673 0.000000 -0.000052 0.00000 SCALE2 0.000000 0.010020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015953 0.00000