HEADER HYDROLASE/DNA 10-OCT-19 6L3G TITLE STRUCTURAL BASIS FOR DNA UNWINDING AT FORKED DSDNA BY TWO COORDINATING TITLE 2 PIF1 HELICASES COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(P*TP*TP*TP*TP*TP*TP*TP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*TP*TP*TP*T)- COMPND 4 3'); COMPND 5 CHAIN: D; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ATP-DEPENDENT DNA HELICASE; COMPND 9 CHAIN: A, B; COMPND 10 SYNONYM: PIF1; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: BACTEROIDES SP. AF32-8BH; SOURCE 7 ORGANISM_TAXID: 2302925; SOURCE 8 GENE: DWZ47_17845; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ATP DEPENDENT DNA HELICASE, PIF1, DSDNA UNWINDING, HYDROLASE, KEYWDS 2 HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.SU,S.R.BHARATH,H.SONG REVDAT 3 22-NOV-23 6L3G 1 REMARK REVDAT 2 23-MAR-22 6L3G 1 LINK REVDAT 1 11-DEC-19 6L3G 0 JRNL AUTH N.SU,A.K.BYRD,S.R.BHARATH,O.YANG,Y.JIA,X.TANG,T.HA, JRNL AUTH 2 K.D.RANEY,H.SONG JRNL TITL STRUCTURAL BASIS FOR DNA UNWINDING AT FORKED DSDNA BY TWO JRNL TITL 2 COORDINATING PIF1 HELICASES. JRNL REF NAT COMMUN V. 10 5375 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31772234 JRNL DOI 10.1038/S41467-019-13414-9 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 17075 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 835 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.5600 - 5.9874 0.95 2698 130 0.1996 0.2607 REMARK 3 2 5.9874 - 4.7567 0.96 2652 157 0.2416 0.3115 REMARK 3 3 4.7567 - 4.1567 0.97 2688 145 0.2283 0.2850 REMARK 3 4 4.1567 - 3.7772 0.99 2723 129 0.2730 0.3393 REMARK 3 5 3.7772 - 3.5068 0.99 2726 149 0.2980 0.3377 REMARK 3 6 3.5068 - 3.3002 1.00 2753 125 0.3312 0.3755 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.520 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6L3G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300014093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XFIT REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17102 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 43.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.20000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.56 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FHD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 80 MM SODIUM CHLORIDE, 40 MM SODIUM REMARK 280 CACODYLATE PH 6.0, 35% MPD, 12 MM SPERMINE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.06100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 78.12200 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 78.12200 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 39.06100 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 78950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 78.12200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DT D 1 REMARK 465 DT D 2 REMARK 465 DT D 3 REMARK 465 DT D 25 REMARK 465 DT D 26 REMARK 465 DT D 27 REMARK 465 DT D 28 REMARK 465 DT D 29 REMARK 465 DT D 30 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 SER A 223 REMARK 465 SER A 224 REMARK 465 SER A 225 REMARK 465 TYR A 226 REMARK 465 ASP A 227 REMARK 465 GLN A 331 REMARK 465 TYR A 332 REMARK 465 THR A 333 REMARK 465 LEU A 334 REMARK 465 LYS A 335 REMARK 465 ASP A 336 REMARK 465 ASN A 337 REMARK 465 GLU A 338 REMARK 465 ILE A 339 REMARK 465 VAL A 340 REMARK 465 LYS A 341 REMARK 465 ASP A 433 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 SER B 223 REMARK 465 SER B 224 REMARK 465 SER B 225 REMARK 465 TYR B 226 REMARK 465 ASP B 227 REMARK 465 GLN B 331 REMARK 465 TYR B 332 REMARK 465 THR B 333 REMARK 465 LEU B 334 REMARK 465 LYS B 335 REMARK 465 ASP B 336 REMARK 465 ASN B 337 REMARK 465 GLU B 338 REMARK 465 ILE B 339 REMARK 465 VAL B 340 REMARK 465 LYS B 341 REMARK 465 GLU B 342 REMARK 465 ASP B 433 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 LYS A 263 CG CD CE NZ REMARK 470 PHE A 264 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 266 CG CD OE1 OE2 REMARK 470 GLU A 343 CG CD OE1 OE2 REMARK 470 ARG A 419 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 19 CG OD1 OD2 REMARK 470 LYS B 263 CG CD CE NZ REMARK 470 GLU B 343 CG CD OE1 OE2 REMARK 470 ARG B 419 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 145 -148.39 -96.72 REMARK 500 ASP A 262 -135.32 76.20 REMARK 500 PHE A 264 85.43 -170.08 REMARK 500 ALA A 355 26.51 -154.75 REMARK 500 GLN B 18 -33.53 -36.19 REMARK 500 GLU B 21 -3.57 -162.73 REMARK 500 GLN B 145 -148.62 -96.95 REMARK 500 ASP B 262 -135.70 75.97 REMARK 500 PHE B 264 86.18 -170.80 REMARK 500 ALA B 355 26.30 -154.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 35 OG1 REMARK 620 2 ADP A 501 O1B 108.3 REMARK 620 3 ALF A 503 F3 153.7 70.7 REMARK 620 4 HOH A 602 O 78.7 84.1 75.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF A 503 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 501 O3B REMARK 620 2 ALF A 503 F1 94.8 REMARK 620 3 ALF A 503 F2 84.5 179.3 REMARK 620 4 ALF A 503 F3 96.9 90.3 89.6 REMARK 620 5 ALF A 503 F4 82.7 89.6 90.5 179.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 35 OG1 REMARK 620 2 ADP B 501 O3B 100.6 REMARK 620 3 ALF B 503 F3 148.5 93.2 REMARK 620 4 HOH B 602 O 83.0 118.8 114.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF B 503 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B 501 O2B REMARK 620 2 ALF B 503 F1 102.7 REMARK 620 3 ALF B 503 F2 77.7 179.6 REMARK 620 4 ALF B 503 F3 91.9 90.1 89.8 REMARK 620 5 ALF B 503 F4 87.3 89.9 90.2 179.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ALF A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ALF B 503 DBREF 6L3G D 1 30 PDB 6L3G 6L3G 1 30 DBREF1 6L3G A 1 433 UNP A0A373G551_9BACE DBREF2 6L3G A A0A373G551 1 433 DBREF1 6L3G B 1 433 UNP A0A373G551_9BACE DBREF2 6L3G B A0A373G551 1 433 SEQRES 1 D 30 DT DT DT DT DT DT DT DT DT DT DC DG DC SEQRES 2 D 30 DG DC DG DC DG DC DG DT DT DT DT DT DT SEQRES 3 D 30 DT DT DT DT SEQRES 1 A 433 MET GLU ASP MET ILE LEU THR GLU GLU MET GLN LYS ILE SEQRES 2 A 433 MET ASN LEU ILE GLN ASP ASP GLU ASN ASN VAL PHE VAL SEQRES 3 A 433 THR GLY LYS ALA GLY SER GLY LYS THR THR PHE LEU LYS SEQRES 4 A 433 TYR LEU ILE GLU LYS SER GLY LYS ASN CYS ILE VAL ALA SEQRES 5 A 433 ALA PRO THR GLY ILE ALA ALA ILE ASN ALA GLY GLY VAL SEQRES 6 A 433 THR LEU HIS SER LEU PHE GLY ILE PRO PHE GLY PRO ILE SEQRES 7 A 433 THR PRO TYR ASP ARG LEU GLU ASN LYS PHE SER GLU TYR SEQRES 8 A 433 LYS VAL GLU LEU LEU LEU LYS MET GLU LEU LEU ILE ILE SEQRES 9 A 433 ASP GLU ILE SER MET VAL ARG PRO ASP ILE LEU ASP THR SEQRES 10 A 433 ILE ASP ARG LYS LEU ARG TRP VAL TYR GLU SER ASP GLU SEQRES 11 A 433 PRO PHE GLY GLY VAL GLN VAL VAL MET PHE GLY ASP LEU SEQRES 12 A 433 PHE GLN LEU PRO PRO VAL THR LYS LYS GLN GLU ARG GLU SEQRES 13 A 433 ILE LEU SER ASP PHE TYR ASP GLY PHE PHE PHE PHE ASN SEQRES 14 A 433 ALA LEU VAL PHE LYS ARG THR GLY PHE HIS ILE VAL GLU SEQRES 15 A 433 LEU THR LYS ILE PHE ARG GLN THR GLU PRO GLU PHE ILE SEQRES 16 A 433 ASN VAL LEU ASN ASN ILE ARG ASN TYR GLN VAL THR SER SEQRES 17 A 433 ASP GLU LEU ASP LEU LEU SER GLU LEU LYS ASP ARG LYS SEQRES 18 A 433 ILE SER SER SER TYR ASP ASN GLU TYR ILE HIS ILE CYS SEQRES 19 A 433 THR HIS LYS ALA ASP VAL GLU LYS ILE ASN ALA ASP LYS SEQRES 20 A 433 LEU GLY GLU GLN GLU ILE ARG ASN TYR ASP ILE VAL ILE SEQRES 21 A 433 LYS ASP LYS PHE PRO GLU SER SER ILE PRO CYS ASP LEU SEQRES 22 A 433 HIS LEU LYS LEU ARG VAL GLY ALA ARG VAL MET SER LEU SEQRES 23 A 433 VAL ASN ASP SER LEU LYS GLY TYR TYR ASN GLY MET LEU SEQRES 24 A 433 GLY ILE VAL THR ALA LEU GLU ASP ASN VAL ILE THR VAL SEQRES 25 A 433 ARG MET ASP ASN GLY ARG THR ILE LYS PHE GLU ARG TYR SEQRES 26 A 433 THR TRP SER ASN THR GLN TYR THR LEU LYS ASP ASN GLU SEQRES 27 A 433 ILE VAL LYS GLU GLU ILE GLY SER CYS THR GLN PHE PRO SEQRES 28 A 433 LEU THR LEU ALA TRP ALA ILE THR ILE HIS LYS SER GLN SEQRES 29 A 433 GLY LEU THR PHE ASP LYS ILE ILE ILE HIS VAL SER HIS SEQRES 30 A 433 THR PHE CYS PRO GLY GLN LEU TYR VAL ALA LEU SER ARG SEQRES 31 A 433 CYS ARG THR LEU GLU GLY ILE VAL SER ASP ALA PHE ILE SEQRES 32 A 433 THR LYS GLN MET ILE ILE PRO GLU TYR ALA LEU ILE ASP SEQRES 33 A 433 PHE GLU ARG ALA TYR LYS SER GLU GLY ASN TYR TYR GLY SEQRES 34 A 433 LYS ARG LEU ASP SEQRES 1 B 433 MET GLU ASP MET ILE LEU THR GLU GLU MET GLN LYS ILE SEQRES 2 B 433 MET ASN LEU ILE GLN ASP ASP GLU ASN ASN VAL PHE VAL SEQRES 3 B 433 THR GLY LYS ALA GLY SER GLY LYS THR THR PHE LEU LYS SEQRES 4 B 433 TYR LEU ILE GLU LYS SER GLY LYS ASN CYS ILE VAL ALA SEQRES 5 B 433 ALA PRO THR GLY ILE ALA ALA ILE ASN ALA GLY GLY VAL SEQRES 6 B 433 THR LEU HIS SER LEU PHE GLY ILE PRO PHE GLY PRO ILE SEQRES 7 B 433 THR PRO TYR ASP ARG LEU GLU ASN LYS PHE SER GLU TYR SEQRES 8 B 433 LYS VAL GLU LEU LEU LEU LYS MET GLU LEU LEU ILE ILE SEQRES 9 B 433 ASP GLU ILE SER MET VAL ARG PRO ASP ILE LEU ASP THR SEQRES 10 B 433 ILE ASP ARG LYS LEU ARG TRP VAL TYR GLU SER ASP GLU SEQRES 11 B 433 PRO PHE GLY GLY VAL GLN VAL VAL MET PHE GLY ASP LEU SEQRES 12 B 433 PHE GLN LEU PRO PRO VAL THR LYS LYS GLN GLU ARG GLU SEQRES 13 B 433 ILE LEU SER ASP PHE TYR ASP GLY PHE PHE PHE PHE ASN SEQRES 14 B 433 ALA LEU VAL PHE LYS ARG THR GLY PHE HIS ILE VAL GLU SEQRES 15 B 433 LEU THR LYS ILE PHE ARG GLN THR GLU PRO GLU PHE ILE SEQRES 16 B 433 ASN VAL LEU ASN ASN ILE ARG ASN TYR GLN VAL THR SER SEQRES 17 B 433 ASP GLU LEU ASP LEU LEU SER GLU LEU LYS ASP ARG LYS SEQRES 18 B 433 ILE SER SER SER TYR ASP ASN GLU TYR ILE HIS ILE CYS SEQRES 19 B 433 THR HIS LYS ALA ASP VAL GLU LYS ILE ASN ALA ASP LYS SEQRES 20 B 433 LEU GLY GLU GLN GLU ILE ARG ASN TYR ASP ILE VAL ILE SEQRES 21 B 433 LYS ASP LYS PHE PRO GLU SER SER ILE PRO CYS ASP LEU SEQRES 22 B 433 HIS LEU LYS LEU ARG VAL GLY ALA ARG VAL MET SER LEU SEQRES 23 B 433 VAL ASN ASP SER LEU LYS GLY TYR TYR ASN GLY MET LEU SEQRES 24 B 433 GLY ILE VAL THR ALA LEU GLU ASP ASN VAL ILE THR VAL SEQRES 25 B 433 ARG MET ASP ASN GLY ARG THR ILE LYS PHE GLU ARG TYR SEQRES 26 B 433 THR TRP SER ASN THR GLN TYR THR LEU LYS ASP ASN GLU SEQRES 27 B 433 ILE VAL LYS GLU GLU ILE GLY SER CYS THR GLN PHE PRO SEQRES 28 B 433 LEU THR LEU ALA TRP ALA ILE THR ILE HIS LYS SER GLN SEQRES 29 B 433 GLY LEU THR PHE ASP LYS ILE ILE ILE HIS VAL SER HIS SEQRES 30 B 433 THR PHE CYS PRO GLY GLN LEU TYR VAL ALA LEU SER ARG SEQRES 31 B 433 CYS ARG THR LEU GLU GLY ILE VAL SER ASP ALA PHE ILE SEQRES 32 B 433 THR LYS GLN MET ILE ILE PRO GLU TYR ALA LEU ILE ASP SEQRES 33 B 433 PHE GLU ARG ALA TYR LYS SER GLU GLY ASN TYR TYR GLY SEQRES 34 B 433 LYS ARG LEU ASP HET ADP A 501 27 HET MG A 502 1 HET ALF A 503 5 HET ADP B 501 27 HET MG B 502 1 HET ALF B 503 5 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM ALF TETRAFLUOROALUMINATE ION FORMUL 4 ADP 2(C10 H15 N5 O10 P2) FORMUL 5 MG 2(MG 2+) FORMUL 6 ALF 2(AL F4 1-) FORMUL 10 HOH *5(H2 O) HELIX 1 AA1 THR A 7 ASP A 20 1 14 HELIX 2 AA2 GLY A 33 SER A 45 1 13 HELIX 3 AA3 THR A 55 GLY A 63 1 9 HELIX 4 AA4 LEU A 67 GLY A 72 1 6 HELIX 5 AA5 SER A 89 MET A 99 1 11 HELIX 6 AA6 GLU A 106 VAL A 110 5 5 HELIX 7 AA7 ARG A 111 GLU A 127 1 17 HELIX 8 AA8 GLU A 130 VAL A 135 5 6 HELIX 9 AA9 LYS A 151 ASP A 160 1 10 HELIX 10 AB1 PHE A 166 ARG A 175 5 10 HELIX 11 AB2 GLU A 191 ASN A 203 1 13 HELIX 12 AB3 THR A 207 ASP A 212 1 6 HELIX 13 AB4 LEU A 213 LYS A 218 5 6 HELIX 14 AB5 HIS A 236 GLY A 249 1 14 HELIX 15 AB6 PRO A 265 ILE A 269 5 5 HELIX 16 AB7 ASP A 289 GLY A 293 5 5 HELIX 17 AB8 ILE A 360 GLN A 364 1 5 HELIX 18 AB9 GLY A 382 SER A 389 1 8 HELIX 19 AC1 THR A 404 ILE A 408 5 5 HELIX 20 AC2 GLU A 411 SER A 423 1 13 HELIX 21 AC3 THR B 7 GLN B 18 1 12 HELIX 22 AC4 GLY B 33 SER B 45 1 13 HELIX 23 AC5 THR B 55 GLY B 63 1 9 HELIX 24 AC6 LEU B 67 GLY B 72 1 6 HELIX 25 AC7 SER B 89 MET B 99 1 11 HELIX 26 AC8 GLU B 106 VAL B 110 5 5 HELIX 27 AC9 ARG B 111 GLU B 127 1 17 HELIX 28 AD1 GLU B 130 VAL B 135 5 6 HELIX 29 AD2 LYS B 151 SER B 159 1 9 HELIX 30 AD3 PHE B 166 ARG B 175 5 10 HELIX 31 AD4 GLU B 191 ASN B 203 1 13 HELIX 32 AD5 THR B 207 ASP B 212 1 6 HELIX 33 AD6 LEU B 213 LYS B 218 5 6 HELIX 34 AD7 HIS B 236 GLY B 249 1 14 HELIX 35 AD8 PRO B 265 ILE B 269 5 5 HELIX 36 AD9 ASP B 289 GLY B 293 5 5 HELIX 37 AE1 ILE B 360 GLN B 364 1 5 HELIX 38 AE2 GLY B 382 SER B 389 1 8 HELIX 39 AE3 THR B 404 ILE B 408 5 5 HELIX 40 AE4 GLU B 411 SER B 423 1 13 SHEET 1 AA1 7 VAL A 65 THR A 66 0 SHEET 2 AA1 7 CYS A 49 ALA A 53 1 N VAL A 51 O VAL A 65 SHEET 3 AA1 7 LEU A 101 ILE A 104 1 O ILE A 103 N ILE A 50 SHEET 4 AA1 7 GLN A 136 PHE A 140 1 O PHE A 140 N ILE A 104 SHEET 5 AA1 7 ASN A 23 GLY A 28 1 N VAL A 26 O MET A 139 SHEET 6 AA1 7 GLY A 177 LEU A 183 1 O HIS A 179 N PHE A 25 SHEET 7 AA1 7 TYR A 427 GLY A 429 -1 O TYR A 428 N PHE A 178 SHEET 1 AA2 4 ALA A 357 THR A 359 0 SHEET 2 AA2 4 ILE A 231 CYS A 234 1 N CYS A 234 O ILE A 358 SHEET 3 AA2 4 ILE A 371 HIS A 374 1 O ILE A 372 N ILE A 231 SHEET 4 AA2 4 ILE A 397 SER A 399 1 O VAL A 398 N ILE A 373 SHEET 1 AA3 2 ARG A 254 ASP A 257 0 SHEET 2 AA3 2 HIS A 274 LEU A 277 -1 O LEU A 275 N TYR A 256 SHEET 1 AA4 3 VAL A 259 LYS A 261 0 SHEET 2 AA4 3 GLY A 345 GLN A 349 -1 O SER A 346 N LYS A 261 SHEET 3 AA4 3 TYR A 325 ASN A 329 -1 N TYR A 325 O GLN A 349 SHEET 1 AA5 5 THR A 319 PHE A 322 0 SHEET 2 AA5 5 ILE A 310 MET A 314 -1 N ILE A 310 O PHE A 322 SHEET 3 AA5 5 LEU A 299 LEU A 305 -1 N ALA A 304 O THR A 311 SHEET 4 AA5 5 ARG A 282 SER A 285 -1 N VAL A 283 O GLY A 300 SHEET 5 AA5 5 LEU A 352 LEU A 354 -1 O THR A 353 N MET A 284 SHEET 1 AA6 7 VAL B 65 THR B 66 0 SHEET 2 AA6 7 CYS B 49 ALA B 53 1 N VAL B 51 O VAL B 65 SHEET 3 AA6 7 LEU B 101 ILE B 104 1 O ILE B 103 N ILE B 50 SHEET 4 AA6 7 GLN B 136 GLY B 141 1 O PHE B 140 N ILE B 104 SHEET 5 AA6 7 ASN B 23 GLY B 28 1 N VAL B 26 O MET B 139 SHEET 6 AA6 7 GLY B 177 LEU B 183 1 O HIS B 179 N PHE B 25 SHEET 7 AA6 7 TYR B 427 GLY B 429 -1 O TYR B 428 N PHE B 178 SHEET 1 AA7 4 ALA B 357 THR B 359 0 SHEET 2 AA7 4 ILE B 231 CYS B 234 1 N CYS B 234 O ILE B 358 SHEET 3 AA7 4 ILE B 371 HIS B 374 1 O ILE B 372 N ILE B 231 SHEET 4 AA7 4 ILE B 397 SER B 399 1 O VAL B 398 N ILE B 373 SHEET 1 AA8 2 ARG B 254 ASP B 257 0 SHEET 2 AA8 2 HIS B 274 LEU B 277 -1 O LEU B 275 N TYR B 256 SHEET 1 AA9 3 VAL B 259 LYS B 261 0 SHEET 2 AA9 3 GLY B 345 GLN B 349 -1 O SER B 346 N LYS B 261 SHEET 3 AA9 3 TYR B 325 ASN B 329 -1 N ASN B 329 O GLY B 345 SHEET 1 AB1 5 THR B 319 PHE B 322 0 SHEET 2 AB1 5 ILE B 310 MET B 314 -1 N VAL B 312 O ILE B 320 SHEET 3 AB1 5 LEU B 299 LEU B 305 -1 N THR B 303 O THR B 311 SHEET 4 AB1 5 ARG B 282 SER B 285 -1 N VAL B 283 O GLY B 300 SHEET 5 AB1 5 LEU B 352 LEU B 354 -1 O THR B 353 N MET B 284 LINK OG1 THR A 35 MG MG A 502 1555 1555 2.03 LINK O1B ADP A 501 MG MG A 502 1555 1555 2.36 LINK O3B ADP A 501 AL ALF A 503 1555 1555 2.50 LINK MG MG A 502 F3 ALF A 503 1555 1555 1.97 LINK MG MG A 502 O HOH A 602 1555 1555 2.21 LINK OG1 THR B 35 MG MG B 502 1555 1555 2.00 LINK O3B ADP B 501 MG MG B 502 1555 1555 2.15 LINK O2B ADP B 501 AL ALF B 503 1555 1555 2.51 LINK MG MG B 502 F3 ALF B 503 1555 1555 1.92 LINK MG MG B 502 O HOH B 602 1555 1555 2.00 SITE 1 AC1 15 MET A 4 ILE A 5 ALA A 30 GLY A 31 SITE 2 AC1 15 SER A 32 GLY A 33 LYS A 34 THR A 35 SITE 3 AC1 15 THR A 36 PHE A 187 ARG A 188 ARG A 392 SITE 4 AC1 15 MG A 502 ALF A 503 HOH A 602 SITE 1 AC2 4 THR A 35 ADP A 501 ALF A 503 HOH A 602 SITE 1 AC3 9 LYS A 34 GLU A 106 GLN A 145 ARG A 188 SITE 2 AC3 9 GLY A 365 ARG A 390 ADP A 501 MG A 502 SITE 3 AC3 9 HOH A 602 SITE 1 AC4 13 ILE B 5 ALA B 30 GLY B 31 SER B 32 SITE 2 AC4 13 GLY B 33 LYS B 34 THR B 35 THR B 36 SITE 3 AC4 13 PHE B 187 ARG B 188 ARG B 392 MG B 502 SITE 4 AC4 13 ALF B 503 SITE 1 AC5 4 THR B 35 ADP B 501 ALF B 503 HOH B 602 SITE 1 AC6 10 ALA B 30 GLY B 31 LYS B 34 GLU B 106 SITE 2 AC6 10 GLN B 145 ARG B 188 GLY B 365 ARG B 390 SITE 3 AC6 10 ADP B 501 MG B 502 CRYST1 131.265 131.265 117.183 90.00 90.00 120.00 P 31 1 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007618 0.004398 0.000000 0.00000 SCALE2 0.000000 0.008797 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008534 0.00000