HEADER OXIDOREDUCTASE 15-OCT-19 6L3W TITLE CRYSTAL STRUCTURE OF BPHC, A HALOTOLERANT CATECHOL DIOXYGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRA-DIOL DIOXYGENASE BPHC; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METAGENOME; SOURCE 3 ORGANISM_TAXID: 256318; SOURCE 4 GENE: 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 8 EXPRESSION_SYSTEM_CELL: BL21-DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS DIOXYGENASE, CATECHOL, METALLOPROTEINS, HALOTOLERANT, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.G.THAKUR,V.SOLANKI REVDAT 3 22-NOV-23 6L3W 1 JRNL REVDAT 2 11-DEC-19 6L3W 1 JRNL REVDAT 1 13-NOV-19 6L3W 0 JRNL AUTH C.SIDHU,V.SOLANKI,A.K.PINNAKA,K.G.THAKUR JRNL TITL STRUCTURE ELUCIDATION AND BIOCHEMICAL CHARACTERIZATION OF JRNL TITL 2 ENVIRONMENTALLY RELEVANT NOVEL EXTRADIOL DIOXYGENASES JRNL TITL 3 DISCOVERED BY A FUNCTIONAL METAGENOMICS APPROACH. JRNL REF MSYSTEMS V. 4 2019 JRNL REFN ESSN 2379-5077 JRNL PMID 31771973 JRNL DOI 10.1128/MSYSTEMS.00316-19 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 11784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 581 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 860 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.45 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.3290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2344 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 151 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.605 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.302 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.214 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.355 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.884 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2412 ; 0.004 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 2102 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3277 ; 0.880 ; 1.644 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4926 ; 0.729 ; 1.629 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 297 ; 7.207 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 133 ;28.126 ;21.053 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 378 ;14.940 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;16.291 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 297 ; 0.043 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2759 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 469 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6L3W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300014146. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 3.3.22 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12365 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 31.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.14100 REMARK 200 R SYM (I) : 0.14100 REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50900 REMARK 200 R SYM FOR SHELL (I) : 0.03900 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.7 REMARK 200 STARTING MODEL: 1HAN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE PH 6.0, 2M NACL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 49.32000 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 49.32000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 79.28000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 49.32000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 49.32000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 79.28000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 49.32000 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 49.32000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 79.28000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 49.32000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 49.32000 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 79.28000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 49.32000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 49.32000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 79.28000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 49.32000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 49.32000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 79.28000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 49.32000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 49.32000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 79.28000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 49.32000 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 49.32000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 79.28000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 158.56000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 158.56000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 158.56000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 158.56000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 546 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 44 -155.47 -167.25 REMARK 500 PRO A 132 81.71 -66.82 REMARK 500 THR A 138 -108.63 -125.76 REMARK 500 ASN A 185 -169.36 -175.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 145 NE2 REMARK 620 2 HIS A 205 NE2 107.9 REMARK 620 3 GLU A 256 OE1 93.9 88.7 REMARK 620 4 HOH A 503 O 119.5 108.1 133.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 301 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE NCBI ACCESSION NUMBER IS KX965751 FOR THIS REMARK 999 SEQUENCE. DBREF 6L3W A -19 296 PDB 6L3W 6L3W -19 296 SEQRES 1 A 316 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 316 LEU VAL PRO ARG GLY SER HIS MET ILE ARG SER MET ALA SEQRES 3 A 316 TYR LEU GLY LEU VAL THR PRO ALA VAL ALA GLU TRP ARG SEQRES 4 A 316 ASN PHE GLY SER GLU ILE LEU GLY LEU GLN LEU ILE GLN SEQRES 5 A 316 LEU ILE GLU ASP GLY ALA ALA ARG PHE ARG MET ASP GLU SEQRES 6 A 316 ALA ASP CYS ARG LEU TRP VAL HIS PRO GLY GLU LYS ASN SEQRES 7 A 316 ASP ILE GLY TYR ILE GLY TRP GLN LEU THR GLY GLU LYS SEQRES 8 A 316 GLU ALA ARG GLU LEU GLY ASP VAL ILE ALA ALA ALA GLY SEQRES 9 A 316 PRO VAL ILE THR ARG ALA THR PRO GLU GLU ALA ALA GLU SEQRES 10 A 316 ARG CYS VAL ALA GLY TYR TYR TRP PHE ILE ASP PRO VAL SEQRES 11 A 316 GLY PHE ARG HIS GLU LEU SER TRP GLY GLN TYR VAL THR SEQRES 12 A 316 PRO ASN SER PHE GLN PRO GLY TRP PRO MET SER GLY PHE SEQRES 13 A 316 LYS THR GLY GLU GLN GLY LEU GLY HIS ILE VAL LEU LEU SEQRES 14 A 316 VAL PRO ASP LEU PRO VAL ALA ASP LYS PHE TYR ARG GLU SEQRES 15 A 316 VAL MET GLY PHE HIS GLN SER ASP CYS ILE ARG ASP GLY SEQRES 16 A 316 SER ARG ALA LEU HIS PHE TYR HIS CYS ASN GLY ARG HIS SEQRES 17 A 316 HIS SER LEU ALA ILE GLY SER PRO GLY PRO GLY VAL ARG SEQRES 18 A 316 GLY ALA HIS HIS ILE MET LEU GLU VAL ASN SER ILE HIS SEQRES 19 A 316 ASP VAL GLY LYS ALA VAL ASP ARG CYS GLU LEU LEU ASP SEQRES 20 A 316 VAL PRO VAL SER LYS SER ILE GLY CYS HIS THR ASN ASP SEQRES 21 A 316 ARG MET VAL SER THR TYR ILE PHE SER PRO SER VAL LEU SEQRES 22 A 316 ARG VAL GLU TYR GLY PHE GLY GLY VAL GLU ILE ASP ASP SEQRES 23 A 316 LEU TRP GLU PRO LYS THR TYR SER ARG THR SER ILE TRP SEQRES 24 A 316 GLY HIS LYS GLU LEU ARG PRO ASP LEU PRO PRO ALA MET SEQRES 25 A 316 ILE ILE GLU ASN HET FE A 301 1 HETNAM FE FE (III) ION FORMUL 2 FE FE 3+ FORMUL 3 HOH *151(H2 O) HELIX 1 AA1 ALA A 14 ILE A 25 1 12 HELIX 2 AA2 GLY A 69 GLY A 84 1 16 HELIX 3 AA3 THR A 91 ARG A 98 1 8 HELIX 4 AA4 THR A 138 GLY A 142 5 5 HELIX 5 AA5 ASP A 152 VAL A 163 1 12 HELIX 6 AA6 SER A 212 ASP A 227 1 16 SHEET 1 AA1 8 GLN A 29 LEU A 30 0 SHEET 2 AA1 8 ALA A 39 ARG A 42 -1 O ARG A 42 N GLN A 29 SHEET 3 AA1 8 LEU A 50 PRO A 54 -1 O VAL A 52 N ALA A 39 SHEET 4 AA1 8 SER A 4 THR A 12 1 N LEU A 10 O TRP A 51 SHEET 5 AA1 8 ASP A 59 GLN A 66 -1 O GLN A 66 N SER A 4 SHEET 6 AA1 8 ARG A 113 TRP A 118 1 O GLU A 115 N TRP A 65 SHEET 7 AA1 8 GLY A 102 ILE A 107 -1 N TYR A 104 O LEU A 116 SHEET 8 AA1 8 THR A 88 ARG A 89 -1 N THR A 88 O TRP A 105 SHEET 1 AA210 THR A 272 TYR A 273 0 SHEET 2 AA210 HIS A 167 ARG A 173 1 N ARG A 173 O TYR A 273 SHEET 3 AA210 ALA A 178 HIS A 183 -1 O PHE A 181 N SER A 169 SHEET 4 AA210 LEU A 191 GLY A 194 -1 O LEU A 191 N TYR A 182 SHEET 5 AA210 HIS A 145 LEU A 149 1 N LEU A 148 O ALA A 192 SHEET 6 AA210 ARG A 201 GLU A 209 -1 O GLY A 202 N LEU A 149 SHEET 7 AA210 ARG A 254 PHE A 259 1 O GLU A 256 N ILE A 206 SHEET 8 AA210 VAL A 243 PHE A 248 -1 N THR A 245 O TYR A 257 SHEET 9 AA210 VAL A 230 HIS A 237 -1 N GLY A 235 O SER A 244 SHEET 10 AA210 SER A 277 TRP A 279 -1 O ILE A 278 N CYS A 236 SHEET 1 AA3 7 THR A 272 TYR A 273 0 SHEET 2 AA3 7 HIS A 167 ARG A 173 1 N ARG A 173 O TYR A 273 SHEET 3 AA3 7 ALA A 178 HIS A 183 -1 O PHE A 181 N SER A 169 SHEET 4 AA3 7 LEU A 191 GLY A 194 -1 O LEU A 191 N TYR A 182 SHEET 5 AA3 7 HIS A 145 LEU A 149 1 N LEU A 148 O ALA A 192 SHEET 6 AA3 7 ARG A 201 GLU A 209 -1 O GLY A 202 N LEU A 149 SHEET 7 AA3 7 MET A 292 GLU A 295 -1 O ILE A 294 N ARG A 201 LINK NE2 HIS A 145 FE FE A 301 1555 1555 2.40 LINK NE2 HIS A 205 FE FE A 301 1555 1555 2.33 LINK OE1 GLU A 256 FE FE A 301 1555 1555 2.28 LINK FE FE A 301 O HOH A 503 1555 1555 2.26 SITE 1 AC1 5 HIS A 145 HIS A 189 HIS A 205 GLU A 256 SITE 2 AC1 5 HOH A 503 CRYST1 98.640 98.640 158.560 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010138 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010138 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006307 0.00000