HEADER STRUCTURAL PROTEIN/INHIBITOR 19-OCT-19 6L4Q TITLE CRYSTAL STRUCTURE OF LYSYL-TRNA SYNTHETASE FROM PLASMODIUM FALCIPARUM TITLE 2 COMPLEXED WITH L-LYSINE AND CLADO-B COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE--TRNA LIGASE; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: LYSYL-TRNA SYNTHETASE; COMPND 5 EC: 6.1.1.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM 3D7; SOURCE 3 ORGANISM_TAXID: 36329; SOURCE 4 STRAIN: ISOLATE 3D7; SOURCE 5 GENE: PF3D7_1350100; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CLADOSPORIN ANALOG, STEREOCHEMISTRY, AMINO-ACYL TRNA SYNTHETASE, KEYWDS 2 STRUCTURAL PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR P.BABBAR,A.SHARMA,Y.MANICKAM,S.MISHRA,K.HARLOS REVDAT 2 22-NOV-23 6L4Q 1 REMARK REVDAT 1 19-MAY-21 6L4Q 0 JRNL AUTH P.BABBAR,M.SATO,Y.MANICKAM,S.MISHRA,K.HARLOS,S.GUPTA, JRNL AUTH 2 S.PARVEZ,H.KIKUCHI,A.SHARMA JRNL TITL CRYSTAL STRUCTURE OF LYSYL-TRNA SYNTHETASE FROM PLASMODIUM JRNL TITL 2 FALCIPARUM COMPLEXED WITH L-LYSINE AND CLADOSPORIN JRNL TITL 3 INHIBITOR, CLA-B JRNL REF CHEMBIOCHEM 2021 JRNL REFN ESSN 1439-7633 JRNL DOI 10.1002/CBIC.202100212 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.KHAN,A.SHARMA,H.BELRHALI,M.YOGAVEL,A.SHARMA REMARK 1 TITL STRUCTURAL BASIS OF MALARIA PARASITE LYSYL-TRNA SYNTHETASE REMARK 1 TITL 2 INHIBITION BY CLADOSPORIN. REMARK 1 REF J. STRUCT. FUNCT. GENOMICS V. 15 63 2014 REMARK 1 REFN ISSN 1570-0267 REMARK 1 PMID 24935905 REMARK 1 DOI 10.1007/S10969-014-9182-1 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15RC1_3423 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 21514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1046 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.6900 - 5.9283 1.00 3122 138 0.2172 0.2468 REMARK 3 2 5.9283 - 4.7062 1.00 2926 167 0.2188 0.2635 REMARK 3 3 4.7062 - 4.1115 1.00 2938 139 0.1905 0.2437 REMARK 3 4 4.1115 - 3.7356 1.00 2874 157 0.2323 0.3230 REMARK 3 5 3.7356 - 3.4679 1.00 2873 169 0.2629 0.3169 REMARK 3 6 3.4679 - 3.2635 1.00 2863 148 0.2916 0.3613 REMARK 3 7 3.2635 - 3.1000 0.99 2872 128 0.3231 0.3966 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6L4Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300014192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 293.14 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23834 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 59.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4PG3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CARBOXYLIC ACIDS-0.2M SODIUM REMARK 280 FORMATE; 0.2M AMMONIUM ACETATE; 0.2M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE; 0.2M SODIUM POTASSIUM TARTRATE TETRAHYDRATE; 0.2M REMARK 280 SODIUM OXAMATE BUFFER SYSTEM- IMIDAZOLE; MES MONOHYDRATE (ACID) REMARK 280 50% V/V PRECIPITANT MIX25% V/V MPD; 25% PEG 1000; 25% W/V PEG REMARK 280 3350, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.09050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.84750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.91650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.84750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.09050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.91650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU B 77 REMARK 465 VAL B 78 REMARK 465 LYS B 224 REMARK 465 TYR B 225 REMARK 465 LYS B 519 REMARK 465 LEU B 520 REMARK 465 GLN B 521 REMARK 465 GLN B 522 REMARK 465 LYS B 523 REMARK 465 ASP B 524 REMARK 465 ARG B 525 REMARK 465 GLU B 526 REMARK 465 LYS B 527 REMARK 465 GLY B 528 REMARK 465 ASP B 529 REMARK 465 THR B 530 REMARK 465 GLU B 531 REMARK 465 ALA B 532 REMARK 465 ALA B 533 REMARK 465 GLN B 534 REMARK 465 ALA B 582 REMARK 465 ASN B 583 REMARK 465 GLU A 77 REMARK 465 VAL A 78 REMARK 465 LYS A 519 REMARK 465 LEU A 520 REMARK 465 GLN A 521 REMARK 465 GLN A 522 REMARK 465 LYS A 523 REMARK 465 ASP A 524 REMARK 465 ARG A 525 REMARK 465 GLU A 526 REMARK 465 LYS A 527 REMARK 465 GLY A 528 REMARK 465 ASP A 529 REMARK 465 THR A 530 REMARK 465 GLU A 531 REMARK 465 ALA A 532 REMARK 465 ALA A 533 REMARK 465 GLN A 534 REMARK 465 ALA A 582 REMARK 465 ASN A 583 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO B 80 -142.36 -79.55 REMARK 500 ASP B 121 52.50 -90.97 REMARK 500 LEU B 128 67.96 -116.40 REMARK 500 SER B 145 83.26 -153.90 REMARK 500 GLN B 147 5.26 59.34 REMARK 500 PRO B 196 -166.94 -75.54 REMARK 500 ASP B 229 44.18 -73.62 REMARK 500 THR B 230 -157.20 -102.14 REMARK 500 ALA B 285 -159.60 -150.96 REMARK 500 GLU B 332 -155.98 -156.66 REMARK 500 ASP B 335 -163.52 -122.96 REMARK 500 ASP B 353 -163.69 -110.98 REMARK 500 LYS B 436 74.07 60.25 REMARK 500 PRO B 443 80.17 -63.37 REMARK 500 THR B 484 -30.26 -136.30 REMARK 500 GLU B 490 54.42 -94.13 REMARK 500 PRO A 80 -81.29 -64.23 REMARK 500 ASP A 121 40.02 -100.14 REMARK 500 SER A 145 79.59 -166.75 REMARK 500 GLN A 147 -14.28 65.03 REMARK 500 LYS A 174 75.49 -116.83 REMARK 500 MET A 223 -166.58 -79.93 REMARK 500 ASP A 229 -52.99 -126.32 REMARK 500 ASP A 353 -161.44 -104.60 REMARK 500 ASN A 381 94.00 -67.95 REMARK 500 ASP A 383 50.13 -102.94 REMARK 500 PHE A 394 52.95 -101.78 REMARK 500 SER A 421 -167.77 -79.81 REMARK 500 ASN A 509 31.93 -96.70 REMARK 500 PRO A 549 96.37 -59.15 REMARK 500 THR A 565 10.40 -142.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 727 DISTANCE = 5.99 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PG3 RELATED DB: PDB DBREF 6L4Q B 77 583 UNP Q8IDJ8 Q8IDJ8_PLAF7 77 583 DBREF 6L4Q A 77 583 UNP Q8IDJ8 Q8IDJ8_PLAF7 77 583 SEQRES 1 B 507 GLU VAL ASP PRO ARG LEU TYR PHE GLU ASN ARG SER LYS SEQRES 2 B 507 PHE ILE GLN ASP GLN LYS ASP LYS GLY ILE ASN PRO TYR SEQRES 3 B 507 PRO HIS LYS PHE GLU ARG THR ILE SER ILE PRO GLU PHE SEQRES 4 B 507 ILE GLU LYS TYR LYS ASP LEU GLY ASN GLY GLU HIS LEU SEQRES 5 B 507 GLU ASP THR ILE LEU ASN ILE THR GLY ARG ILE MET ARG SEQRES 6 B 507 VAL SER ALA SER GLY GLN LYS LEU ARG PHE PHE ASP LEU SEQRES 7 B 507 VAL GLY ASP GLY GLU LYS ILE GLN VAL LEU ALA ASN TYR SEQRES 8 B 507 SER PHE HIS ASN HIS GLU LYS GLY ASN PHE ALA GLU CYS SEQRES 9 B 507 TYR ASP LYS ILE ARG ARG GLY ASP ILE VAL GLY ILE VAL SEQRES 10 B 507 GLY PHE PRO GLY LYS SER LYS LYS GLY GLU LEU SER ILE SEQRES 11 B 507 PHE PRO LYS GLU THR ILE LEU LEU SER ALA CYS LEU HIS SEQRES 12 B 507 MET LEU PRO MET LYS TYR GLY LEU LYS ASP THR GLU ILE SEQRES 13 B 507 ARG TYR ARG GLN ARG TYR LEU ASP LEU LEU ILE ASN GLU SEQRES 14 B 507 SER SER ARG HIS THR PHE VAL THR ARG THR LYS ILE ILE SEQRES 15 B 507 ASN PHE LEU ARG ASN PHE LEU ASN GLU ARG GLY PHE PHE SEQRES 16 B 507 GLU VAL GLU THR PRO MET MET ASN LEU ILE ALA GLY GLY SEQRES 17 B 507 ALA ASN ALA ARG PRO PHE ILE THR HIS HIS ASN ASP LEU SEQRES 18 B 507 ASP LEU ASP LEU TYR LEU ARG ILE ALA THR GLU LEU PRO SEQRES 19 B 507 LEU LYS MET LEU ILE VAL GLY GLY ILE ASP LYS VAL TYR SEQRES 20 B 507 GLU ILE GLY LYS VAL PHE ARG ASN GLU GLY ILE ASP ASN SEQRES 21 B 507 THR HIS ASN PRO GLU PHE THR SER CYS GLU PHE TYR TRP SEQRES 22 B 507 ALA TYR ALA ASP TYR ASN ASP LEU ILE LYS TRP SER GLU SEQRES 23 B 507 ASP PHE PHE SER GLN LEU VAL TYR HIS LEU PHE GLY THR SEQRES 24 B 507 TYR LYS ILE SER TYR ASN LYS ASP GLY PRO GLU ASN GLN SEQRES 25 B 507 PRO ILE GLU ILE ASP PHE THR PRO PRO TYR PRO LYS VAL SEQRES 26 B 507 SER ILE VAL GLU GLU ILE GLU LYS VAL THR ASN THR ILE SEQRES 27 B 507 LEU GLU GLN PRO PHE ASP SER ASN GLU THR ILE GLU LYS SEQRES 28 B 507 MET ILE ASN ILE ILE LYS GLU HIS LYS ILE GLU LEU PRO SEQRES 29 B 507 ASN PRO PRO THR ALA ALA LYS LEU LEU ASP GLN LEU ALA SEQRES 30 B 507 SER HIS PHE ILE GLU ASN LYS TYR ASN ASP LYS PRO PHE SEQRES 31 B 507 PHE ILE VAL GLU HIS PRO GLN ILE MET SER PRO LEU ALA SEQRES 32 B 507 LYS TYR HIS ARG THR LYS PRO GLY LEU THR GLU ARG LEU SEQRES 33 B 507 GLU MET PHE ILE CYS GLY LYS GLU VAL LEU ASN ALA TYR SEQRES 34 B 507 THR GLU LEU ASN ASP PRO PHE LYS GLN LYS GLU CYS PHE SEQRES 35 B 507 LYS LEU GLN GLN LYS ASP ARG GLU LYS GLY ASP THR GLU SEQRES 36 B 507 ALA ALA GLN LEU ASP SER ALA PHE CYS THR SER LEU GLU SEQRES 37 B 507 TYR GLY LEU PRO PRO THR GLY GLY LEU GLY LEU GLY ILE SEQRES 38 B 507 ASP ARG ILE THR MET PHE LEU THR ASN LYS ASN SER ILE SEQRES 39 B 507 LYS ASP VAL ILE LEU PHE PRO THR MET ARG PRO ALA ASN SEQRES 1 A 507 GLU VAL ASP PRO ARG LEU TYR PHE GLU ASN ARG SER LYS SEQRES 2 A 507 PHE ILE GLN ASP GLN LYS ASP LYS GLY ILE ASN PRO TYR SEQRES 3 A 507 PRO HIS LYS PHE GLU ARG THR ILE SER ILE PRO GLU PHE SEQRES 4 A 507 ILE GLU LYS TYR LYS ASP LEU GLY ASN GLY GLU HIS LEU SEQRES 5 A 507 GLU ASP THR ILE LEU ASN ILE THR GLY ARG ILE MET ARG SEQRES 6 A 507 VAL SER ALA SER GLY GLN LYS LEU ARG PHE PHE ASP LEU SEQRES 7 A 507 VAL GLY ASP GLY GLU LYS ILE GLN VAL LEU ALA ASN TYR SEQRES 8 A 507 SER PHE HIS ASN HIS GLU LYS GLY ASN PHE ALA GLU CYS SEQRES 9 A 507 TYR ASP LYS ILE ARG ARG GLY ASP ILE VAL GLY ILE VAL SEQRES 10 A 507 GLY PHE PRO GLY LYS SER LYS LYS GLY GLU LEU SER ILE SEQRES 11 A 507 PHE PRO LYS GLU THR ILE LEU LEU SER ALA CYS LEU HIS SEQRES 12 A 507 MET LEU PRO MET LYS TYR GLY LEU LYS ASP THR GLU ILE SEQRES 13 A 507 ARG TYR ARG GLN ARG TYR LEU ASP LEU LEU ILE ASN GLU SEQRES 14 A 507 SER SER ARG HIS THR PHE VAL THR ARG THR LYS ILE ILE SEQRES 15 A 507 ASN PHE LEU ARG ASN PHE LEU ASN GLU ARG GLY PHE PHE SEQRES 16 A 507 GLU VAL GLU THR PRO MET MET ASN LEU ILE ALA GLY GLY SEQRES 17 A 507 ALA ASN ALA ARG PRO PHE ILE THR HIS HIS ASN ASP LEU SEQRES 18 A 507 ASP LEU ASP LEU TYR LEU ARG ILE ALA THR GLU LEU PRO SEQRES 19 A 507 LEU LYS MET LEU ILE VAL GLY GLY ILE ASP LYS VAL TYR SEQRES 20 A 507 GLU ILE GLY LYS VAL PHE ARG ASN GLU GLY ILE ASP ASN SEQRES 21 A 507 THR HIS ASN PRO GLU PHE THR SER CYS GLU PHE TYR TRP SEQRES 22 A 507 ALA TYR ALA ASP TYR ASN ASP LEU ILE LYS TRP SER GLU SEQRES 23 A 507 ASP PHE PHE SER GLN LEU VAL TYR HIS LEU PHE GLY THR SEQRES 24 A 507 TYR LYS ILE SER TYR ASN LYS ASP GLY PRO GLU ASN GLN SEQRES 25 A 507 PRO ILE GLU ILE ASP PHE THR PRO PRO TYR PRO LYS VAL SEQRES 26 A 507 SER ILE VAL GLU GLU ILE GLU LYS VAL THR ASN THR ILE SEQRES 27 A 507 LEU GLU GLN PRO PHE ASP SER ASN GLU THR ILE GLU LYS SEQRES 28 A 507 MET ILE ASN ILE ILE LYS GLU HIS LYS ILE GLU LEU PRO SEQRES 29 A 507 ASN PRO PRO THR ALA ALA LYS LEU LEU ASP GLN LEU ALA SEQRES 30 A 507 SER HIS PHE ILE GLU ASN LYS TYR ASN ASP LYS PRO PHE SEQRES 31 A 507 PHE ILE VAL GLU HIS PRO GLN ILE MET SER PRO LEU ALA SEQRES 32 A 507 LYS TYR HIS ARG THR LYS PRO GLY LEU THR GLU ARG LEU SEQRES 33 A 507 GLU MET PHE ILE CYS GLY LYS GLU VAL LEU ASN ALA TYR SEQRES 34 A 507 THR GLU LEU ASN ASP PRO PHE LYS GLN LYS GLU CYS PHE SEQRES 35 A 507 LYS LEU GLN GLN LYS ASP ARG GLU LYS GLY ASP THR GLU SEQRES 36 A 507 ALA ALA GLN LEU ASP SER ALA PHE CYS THR SER LEU GLU SEQRES 37 A 507 TYR GLY LEU PRO PRO THR GLY GLY LEU GLY LEU GLY ILE SEQRES 38 A 507 ASP ARG ILE THR MET PHE LEU THR ASN LYS ASN SER ILE SEQRES 39 A 507 LYS ASP VAL ILE LEU PHE PRO THR MET ARG PRO ALA ASN HET E5R B 601 21 HET LYS B 602 10 HET E5R A 601 21 HET LYS A 602 10 HETNAM E5R (3R)-3-[[(3R)-3-METHYLPIPERIDIN-1-YL]METHYL]-6,8- HETNAM 2 E5R BIS(OXIDANYL)-3,4-DIHYDROISOCHROMEN-1-ONE HETNAM LYS LYSINE FORMUL 3 E5R 2(C16 H21 N O4) FORMUL 4 LYS 2(C6 H15 N2 O2 1+) FORMUL 7 HOH *50(H2 O) HELIX 1 AA1 ARG B 81 GLY B 98 1 18 HELIX 2 AA2 SER B 111 LYS B 120 1 10 HELIX 3 AA3 SER B 168 HIS B 170 5 3 HELIX 4 AA4 ASN B 171 GLY B 175 5 5 HELIX 5 AA5 ALA B 178 LYS B 183 1 6 HELIX 6 AA6 GLU B 231 GLN B 236 1 6 HELIX 7 AA7 GLN B 236 ASN B 244 1 9 HELIX 8 AA8 ASN B 244 GLU B 267 1 24 HELIX 9 AA9 THR B 307 GLY B 317 1 11 HELIX 10 AB1 ASP B 353 GLY B 374 1 22 HELIX 11 AB2 ILE B 403 ASN B 412 1 10 HELIX 12 AB3 SER B 421 HIS B 435 1 15 HELIX 13 AB4 THR B 444 HIS B 455 1 12 HELIX 14 AB5 PRO B 472 SER B 476 5 5 HELIX 15 AB6 ASP B 536 GLU B 544 1 9 HELIX 16 AB7 ILE B 557 THR B 565 1 9 HELIX 17 AB8 SER B 569 VAL B 573 5 5 HELIX 18 AB9 LEU A 82 GLY A 98 1 17 HELIX 19 AC1 ILE A 112 TYR A 119 1 8 HELIX 20 AC2 SER A 168 HIS A 170 5 3 HELIX 21 AC3 ASN A 176 ASP A 182 1 7 HELIX 22 AC4 MET A 223 LEU A 227 5 5 HELIX 23 AC5 GLU A 231 GLN A 236 1 6 HELIX 24 AC6 GLN A 236 LEU A 241 1 6 HELIX 25 AC7 ASN A 244 ARG A 268 1 25 HELIX 26 AC8 THR A 307 GLY A 317 1 11 HELIX 27 AC9 ASP A 353 GLY A 374 1 22 HELIX 28 AD1 ILE A 403 THR A 411 1 9 HELIX 29 AD2 MET A 428 LYS A 433 1 6 HELIX 30 AD3 THR A 444 HIS A 455 1 12 HELIX 31 AD4 ILE A 457 TYR A 461 5 5 HELIX 32 AD5 ASP A 536 TYR A 545 1 10 HELIX 33 AD6 ILE A 557 LEU A 564 1 8 SHEET 1 AA1 6 LEU B 133 SER B 145 0 SHEET 2 AA1 6 LEU B 149 GLY B 156 -1 O ASP B 153 N MET B 140 SHEET 3 AA1 6 GLU B 159 ASN B 166 -1 O ILE B 161 N LEU B 154 SHEET 4 AA1 6 SER B 205 SER B 215 1 O ILE B 206 N LEU B 164 SHEET 5 AA1 6 ILE B 189 PHE B 195 -1 N VAL B 193 O LYS B 209 SHEET 6 AA1 6 LEU B 133 SER B 145 -1 N LEU B 133 O GLY B 194 SHEET 1 AA2 8 PHE B 271 GLU B 272 0 SHEET 2 AA2 8 LYS B 321 PHE B 329 1 O LYS B 321 N PHE B 271 SHEET 3 AA2 8 GLU B 341 ALA B 350 -1 O TYR B 348 N VAL B 322 SHEET 4 AA2 8 THR B 550 GLY B 556 -1 O LEU B 555 N CYS B 345 SHEET 5 AA2 8 LYS B 499 THR B 506 -1 N ASN B 503 O GLY B 554 SHEET 6 AA2 8 ARG B 491 ILE B 496 -1 N LEU B 492 O ALA B 504 SHEET 7 AA2 8 PHE B 466 VAL B 469 -1 N ILE B 468 O GLU B 493 SHEET 8 AA2 8 LYS B 400 SER B 402 1 N VAL B 401 O VAL B 469 SHEET 1 AA3 3 MET B 278 ASN B 279 0 SHEET 2 AA3 3 ASP B 300 LEU B 303 -1 O TYR B 302 N ASN B 279 SHEET 3 AA3 3 ILE B 291 HIS B 293 -1 N THR B 292 O LEU B 301 SHEET 1 AA4 2 LYS B 377 TYR B 380 0 SHEET 2 AA4 2 ILE B 390 ASP B 393 -1 O ILE B 390 N TYR B 380 SHEET 1 AA5 6 LEU A 133 ALA A 144 0 SHEET 2 AA5 6 LEU A 149 GLY A 156 -1 O ASP A 153 N MET A 140 SHEET 3 AA5 6 GLU A 159 ASN A 166 -1 O ALA A 165 N ARG A 150 SHEET 4 AA5 6 LEU A 204 SER A 215 1 O ILE A 206 N GLN A 162 SHEET 5 AA5 6 ILE A 189 LYS A 198 -1 N ILE A 189 O SER A 215 SHEET 6 AA5 6 LEU A 133 ALA A 144 -1 N LEU A 133 O GLY A 194 SHEET 1 AA6 8 PHE A 271 GLU A 272 0 SHEET 2 AA6 8 LYS A 321 PHE A 329 1 O TYR A 323 N PHE A 271 SHEET 3 AA6 8 GLU A 341 ALA A 350 -1 O SER A 344 N GLY A 326 SHEET 4 AA6 8 THR A 550 GLY A 556 -1 O GLY A 551 N TRP A 349 SHEET 5 AA6 8 LYS A 499 THR A 506 -1 N TYR A 505 O GLY A 552 SHEET 6 AA6 8 LEU A 492 ILE A 496 -1 N LEU A 492 O ALA A 504 SHEET 7 AA6 8 PHE A 466 VAL A 469 -1 N ILE A 468 O GLU A 493 SHEET 8 AA6 8 LYS A 400 SER A 402 1 N VAL A 401 O VAL A 469 SHEET 1 AA7 3 MET A 278 ASN A 279 0 SHEET 2 AA7 3 LEU A 299 LEU A 303 -1 O TYR A 302 N ASN A 279 SHEET 3 AA7 3 ILE A 291 HIS A 294 -1 N THR A 292 O LEU A 301 SHEET 1 AA8 2 LYS A 377 TYR A 380 0 SHEET 2 AA8 2 ILE A 390 ASP A 393 -1 O ILE A 392 N ILE A 378 SSBOND 1 CYS B 517 CYS B 540 1555 1555 2.03 SSBOND 2 CYS A 517 CYS A 540 1555 1555 2.03 CISPEP 1 PRO B 396 PRO B 397 0 1.10 CISPEP 2 GLN B 417 PRO B 418 0 0.50 CISPEP 3 ASN B 441 PRO B 442 0 -1.30 CISPEP 4 PRO A 396 PRO A 397 0 -1.22 CISPEP 5 GLN A 417 PRO A 418 0 -0.49 CISPEP 6 ASN A 441 PRO A 442 0 -1.47 CRYST1 52.181 121.833 179.695 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019164 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008208 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005565 0.00000