HEADER HYDROLASE 21-OCT-19 6L4W TITLE TURNING AN ASPARAGINYL ENDOPEPTIDASE INTO A PEPTIDE LIGASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARAGINYL ENDOPEPTIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BUTELASE 2A; COMPND 5 EC: 3.4.22.34; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLITORIA TERNATEA; SOURCE 3 ORGANISM_COMMON: BUTTERFLY PEA; SOURCE 4 ORGANISM_TAXID: 43366; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA AFF. FRUGIPERDA 1 BOLD-2017; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 2449148 KEYWDS AEP, ASPARAGINYL ENDOPEPTIDASE, PEPTIDE ASPARAGINYL LIGASE, PAL, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.EL SAHILI,J.LESCAR REVDAT 3 22-NOV-23 6L4W 1 REMARK REVDAT 2 15-NOV-23 6L4W 1 LINK ATOM REVDAT 1 07-OCT-20 6L4W 0 JRNL AUTH X.HEMU,A.EL SAHILI,S.HU,X.ZHANG,A.SERRA,B.C.GOH,D.A.DARWIS, JRNL AUTH 2 M.W.CHEN,S.K.SZE,C.F.LIU,J.LESCAR,J.P.TAM JRNL TITL TURNING AN ASPARAGINYL ENDOPEPTIDASE INTO A PEPTIDE LIGASE JRNL REF ACS CATALYSIS V. 10 8825 2020 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.0C02078 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (3-OCT-2019) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 56398 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2821 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.97 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3242 REMARK 3 BIN FREE R VALUE : 0.4279 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 57 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3199 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 392 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.14850 REMARK 3 B22 (A**2) : 1.18380 REMARK 3 B33 (A**2) : -2.33240 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.290 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.108 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.104 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.101 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.099 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3325 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4495 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1145 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 565 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3325 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 417 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3355 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.96 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.24 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.49 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6L4W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1300014201. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918820 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56975 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 22.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.07842 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.72 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.72200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6L4V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM FORMATE; 0.1M AMMONIUM REMARK 280 ACETATE; 0.1M SODIUM CITRATE TRIBASIC DIHYDRATE; 0.1M POTASSIUM REMARK 280 SODIUM TARTRATE TETRAHYDRATE; 0.1M SODIUM OXAMATE 0.1M HEPES, REMARK 280 0.1M MOPS, 10% ETHYLEN GLYCOL, 8% PEG8000, PH 7.2, EVAPORATION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.57500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 67.79500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.57500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 67.79500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 79.15000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 VAL A -12 REMARK 465 SER A -11 REMARK 465 ALA A -10 REMARK 465 ILE A -9 REMARK 465 VAL A -8 REMARK 465 LEU A -7 REMARK 465 TYR A -6 REMARK 465 VAL A -5 REMARK 465 LEU A -4 REMARK 465 LEU A -3 REMARK 465 ALA A -2 REMARK 465 ALA A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 1 REMARK 465 HIS A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 PHE A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 MET A 9 REMARK 465 GLY A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 HIS A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 SER A 17 REMARK 465 SER A 18 REMARK 465 GLY A 19 REMARK 465 VAL A 20 REMARK 465 ASP A 21 REMARK 465 LEU A 22 REMARK 465 GLY A 23 REMARK 465 THR A 24 REMARK 465 GLU A 25 REMARK 465 ASN A 26 REMARK 465 LEU A 27 REMARK 465 TYR A 28 REMARK 465 PHE A 29 REMARK 465 GLN A 30 REMARK 465 SER A 31 REMARK 465 MET A 32 REMARK 465 ALA A 33 REMARK 465 ARG A 34 REMARK 465 LEU A 35 REMARK 465 ASN A 36 REMARK 465 PRO A 37 REMARK 465 GLN A 38 REMARK 465 LYS A 39 REMARK 465 GLU A 40 REMARK 465 TRP A 41 REMARK 465 ASP A 42 REMARK 465 SER A 43 REMARK 465 VAL A 44 REMARK 465 ILE A 45 REMARK 465 ARG A 46 REMARK 465 LEU A 47 REMARK 465 PRO A 48 REMARK 465 THR A 49 REMARK 465 GLU A 50 REMARK 465 PRO A 51 REMARK 465 VAL A 52 REMARK 465 ASP A 53 REMARK 465 ALA A 54 REMARK 465 ASP A 55 REMARK 465 THR A 56 REMARK 465 ASP A 57 REMARK 465 GLU A 58 REMARK 465 VAL A 59 REMARK 465 PRO A 343 REMARK 465 HIS A 344 REMARK 465 ASN A 345 REMARK 465 GLY A 346 REMARK 465 ARG A 347 REMARK 465 ILE A 348 REMARK 465 GLU A 349 REMARK 465 HIS A 374 REMARK 465 LEU A 375 REMARK 465 LEU A 376 REMARK 465 GLY A 377 REMARK 465 LYS A 378 REMARK 465 GLY A 481 REMARK 465 GLY A 482 REMARK 465 HIS A 483 REMARK 465 ASP A 484 REMARK 465 ALA A 485 REMARK 465 GLY A 486 REMARK 465 HIS A 487 REMARK 465 LEU A 488 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 373 CG OD1 ND2 REMARK 470 LYS A 379 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 703 O HOH A 743 1554 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SNN A 179 CA - C - N ANGL. DEV. = -15.4 DEGREES REMARK 500 SNN A 179 O - C - N ANGL. DEV. = 12.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 105 33.31 71.12 REMARK 500 SNN A 179 -130.69 175.20 REMARK 500 ASN A 190 65.99 65.45 REMARK 500 PRO A 260 -98.92 0.35 REMARK 500 SER A 261 78.35 132.09 REMARK 500 MET A 311 41.78 -145.76 REMARK 500 ASN A 340 -162.85 -103.71 REMARK 500 LEU A 341 175.68 71.57 REMARK 500 ARG A 371 40.52 -85.32 REMARK 500 SER A 372 14.29 170.40 REMARK 500 THR A 449 171.76 63.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 990 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH A 991 DISTANCE = 7.87 ANGSTROMS REMARK 525 HOH A 992 DISTANCE = 8.29 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6L4V RELATED DB: PDB REMARK 900 RELATED ID: 6L4X RELATED DB: PDB REMARK 900 RELATED ID: 6L4Y RELATED DB: PDB DBREF1 6L4W A 33 488 UNP A0A0P0QM28_CLITE DBREF2 6L4W A A0A0P0QM28 33 488 SEQADV 6L4W MET A -13 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W VAL A -12 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W SER A -11 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A -10 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ILE A -9 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W VAL A -8 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W LEU A -7 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W TYR A -6 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W VAL A -5 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W LEU A -4 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W LEU A -3 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A -2 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A -1 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A 0 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A 1 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W HIS A 2 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W SER A 3 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A 4 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W PHE A 5 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A 6 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A 7 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ALA A 8 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W MET A 9 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W GLY A 10 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W HIS A 11 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W HIS A 12 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W HIS A 13 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W HIS A 14 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W HIS A 15 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W HIS A 16 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W SER A 17 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W SER A 18 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W GLY A 19 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W VAL A 20 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ASP A 21 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W LEU A 22 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W GLY A 23 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W THR A 24 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W GLU A 25 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W ASN A 26 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W LEU A 27 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W TYR A 28 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W PHE A 29 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W GLN A 30 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W SER A 31 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W MET A 32 UNP A0A0P0QM2 EXPRESSION TAG SEQADV 6L4W SNN A 179 UNP A0A0P0QM2 ASP 179 MODIFIED RESIDUE SEQADV 6L4W VAL A 252 UNP A0A0P0QM2 GLY 252 ENGINEERED MUTATION SEQRES 1 A 502 MET VAL SER ALA ILE VAL LEU TYR VAL LEU LEU ALA ALA SEQRES 2 A 502 ALA ALA HIS SER ALA PHE ALA ALA ALA MET GLY HIS HIS SEQRES 3 A 502 HIS HIS HIS HIS SER SER GLY VAL ASP LEU GLY THR GLU SEQRES 4 A 502 ASN LEU TYR PHE GLN SER MET ALA ARG LEU ASN PRO GLN SEQRES 5 A 502 LYS GLU TRP ASP SER VAL ILE ARG LEU PRO THR GLU PRO SEQRES 6 A 502 VAL ASP ALA ASP THR ASP GLU VAL GLY THR ARG TRP ALA SEQRES 7 A 502 VAL LEU VAL ALA GLY SER ASN GLY TYR GLU ASN TYR ARG SEQRES 8 A 502 HIS GLN ALA ASP VAL CYS HIS ALA TYR GLN LEU LEU ILE SEQRES 9 A 502 LYS GLY GLY LEU LYS GLU GLU ASN ILE VAL VAL PHE MET SEQRES 10 A 502 TYR ASP ASP ILE ALA TRP HIS GLU LEU ASN PRO ARG PRO SEQRES 11 A 502 GLY VAL ILE ILE ASN ASN PRO ARG GLY GLU ASP VAL TYR SEQRES 12 A 502 ALA GLY VAL PRO LYS ASP TYR THR GLY GLU ASP VAL THR SEQRES 13 A 502 ALA GLU ASN LEU PHE ALA VAL ILE LEU GLY ASP ARG SER SEQRES 14 A 502 LYS VAL LYS GLY GLY SER GLY LYS VAL ILE ASN SER LYS SEQRES 15 A 502 PRO GLU ASP ARG ILE PHE ILE PHE TYR SER SNN HIS GLY SEQRES 16 A 502 GLY PRO GLY VAL LEU GLY MET PRO ASN GLU GLN ILE LEU SEQRES 17 A 502 TYR ALA MET ASP PHE ILE ASP VAL LEU LYS LYS LYS HIS SEQRES 18 A 502 ALA SER GLY GLY TYR ARG GLU MET VAL ILE TYR VAL GLU SEQRES 19 A 502 ALA CYS GLU SER GLY SER LEU PHE GLU GLY ILE MET PRO SEQRES 20 A 502 LYS ASP LEU ASN VAL PHE VAL THR THR ALA SER ASN ALA SEQRES 21 A 502 GLN GLU ASN SER TRP VAL THR TYR CYS PRO GLY THR GLU SEQRES 22 A 502 PRO SER PRO PRO PRO GLU TYR THR THR CYS LEU GLY ASP SEQRES 23 A 502 LEU TYR SER VAL ALA TRP MET GLU ASP SER GLU SER HIS SEQRES 24 A 502 ASN LEU ARG ARG GLU THR VAL ASN GLN GLN TYR ARG SER SEQRES 25 A 502 VAL LYS GLU ARG THR SER ASN PHE LYS ASP TYR ALA MET SEQRES 26 A 502 GLY SER HIS VAL MET GLN TYR GLY ASP THR ASN ILE THR SEQRES 27 A 502 ALA GLU LYS LEU TYR LEU PHE GLN GLY PHE ASP PRO ALA SEQRES 28 A 502 THR VAL ASN LEU PRO PRO HIS ASN GLY ARG ILE GLU ALA SEQRES 29 A 502 LYS MET GLU VAL VAL HIS GLN ARG ASP ALA GLU LEU LEU SEQRES 30 A 502 PHE MET TRP GLN MET TYR GLN ARG SER ASN HIS LEU LEU SEQRES 31 A 502 GLY LYS LYS THR HIS ILE LEU LYS GLN ILE ALA GLU THR SEQRES 32 A 502 VAL LYS HIS ARG ASN HIS LEU ASP GLY SER VAL GLU LEU SEQRES 33 A 502 ILE GLY VAL LEU LEU TYR GLY PRO GLY LYS GLY SER PRO SEQRES 34 A 502 VAL LEU GLN SER VAL ARG ASP PRO GLY LEU PRO LEU VAL SEQRES 35 A 502 ASP ASN TRP ALA CYS LEU LYS SER MET VAL ARG VAL PHE SEQRES 36 A 502 GLU SER HIS CYS GLY SER LEU THR GLN TYR GLY MET LYS SEQRES 37 A 502 HIS MET ARG ALA PHE ALA ASN ILE CYS ASN SER GLY VAL SEQRES 38 A 502 SER GLU SER SER MET GLU GLU ALA CYS MET VAL ALA CYS SEQRES 39 A 502 GLY GLY HIS ASP ALA GLY HIS LEU MODRES 6L4W SNN A 179 ASP MODIFIED RESIDUE HET SNN A 179 7 HET NAG A 501 14 HET EDO A 502 4 HET PEG A 503 7 HETNAM SNN L-3-AMINOSUCCINIMIDE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 SNN C4 H6 N2 O2 FORMUL 2 NAG C8 H15 N O6 FORMUL 3 EDO C2 H6 O2 FORMUL 4 PEG C4 H10 O3 FORMUL 5 HOH *392(H2 O) HELIX 1 AA1 GLY A 72 GLU A 74 5 3 HELIX 2 AA2 ASN A 75 GLY A 92 1 18 HELIX 3 AA3 LYS A 95 GLU A 97 5 3 HELIX 4 AA4 THR A 137 VAL A 141 5 5 HELIX 5 AA5 THR A 142 GLY A 152 1 11 HELIX 6 AA6 ASP A 153 VAL A 157 5 5 HELIX 7 AA7 ALA A 196 SER A 209 1 14 HELIX 8 AA8 GLU A 223 PHE A 228 5 6 HELIX 9 AA9 LEU A 273 SER A 284 1 12 HELIX 10 AB1 THR A 291 ASN A 305 1 15 HELIX 11 AB2 THR A 321 LYS A 327 5 7 HELIX 12 AB3 LEU A 328 GLY A 333 1 6 HELIX 13 AB4 ASP A 335 VAL A 339 5 5 HELIX 14 AB5 ASP A 359 ARG A 371 1 13 HELIX 15 AB6 THR A 380 GLY A 409 1 30 HELIX 16 AB7 LYS A 412 SER A 419 1 8 HELIX 17 AB8 ASN A 430 GLY A 446 1 17 HELIX 18 AB9 LEU A 448 MET A 453 1 6 HELIX 19 AC1 HIS A 455 SER A 465 1 11 HELIX 20 AC2 SER A 468 CYS A 480 1 13 SHEET 1 AA1 6 ILE A 99 PHE A 102 0 SHEET 2 AA1 6 ARG A 62 ALA A 68 1 N LEU A 66 O VAL A 100 SHEET 3 AA1 6 ARG A 172 SER A 178 1 O PHE A 176 N VAL A 67 SHEET 4 AA1 6 GLU A 214 VAL A 219 1 O TYR A 218 N ILE A 175 SHEET 5 AA1 6 VAL A 238 THR A 242 1 O PHE A 239 N MET A 215 SHEET 6 AA1 6 MET A 316 GLY A 319 -1 O TYR A 318 N VAL A 240 SHEET 1 AA2 3 GLY A 181 GLY A 182 0 SHEET 2 AA2 3 VAL A 185 MET A 188 -1 O VAL A 185 N GLY A 182 SHEET 3 AA2 3 GLN A 192 TYR A 195 -1 O LEU A 194 N LEU A 186 SHEET 1 AA3 3 GLY A 271 ASP A 272 0 SHEET 2 AA3 3 TRP A 251 THR A 253 -1 N THR A 253 O GLY A 271 SHEET 3 AA3 3 VAL A 355 HIS A 356 -1 O VAL A 355 N VAL A 252 SSBOND 1 CYS A 445 CYS A 480 1555 1555 2.92 LINK C SER A 178 N SNN A 179 1555 1555 1.39 LINK C SNN A 179 N HIS A 180 1555 1555 1.35 LINK C5 SNN A 179 N HIS A 180 1555 1555 1.37 CISPEP 1 GLU A 259 PRO A 260 0 0.85 CRYST1 79.150 135.590 44.610 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012634 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007375 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022416 0.00000