HEADER HYDROLASE 03-NOV-19 6L7W TITLE CRYSTAL STRUCTURE OF CET1 FROM TRYPANOSOMA CRUZI IN COMPLEX WITH TITLE 2 MANGANESE ION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MRNA_TRIPASE DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI STRAIN CL BRENER; SOURCE 3 ORGANISM_TAXID: 353153; SOURCE 4 STRAIN: CL BRENER; SOURCE 5 GENE: TC00.1047053508479.390; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MRNA CAPPING, RNA TRIPHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.KUWABARA,K.HO REVDAT 4 03-APR-24 6L7W 1 REMARK REVDAT 3 27-MAR-24 6L7W 1 REMARK REVDAT 2 15-JUL-20 6L7W 1 JRNL REVDAT 1 03-JUN-20 6L7W 0 JRNL AUTH Y.TAKAGI,N.KUWABARA,T.T.DANG,K.FURUKAWA,C.K.HO JRNL TITL CRYSTAL STRUCTURES OF THE RNA TRIPHOSPHATASE FROMTRYPANOSOMA JRNL TITL 2 CRUZIPROVIDE INSIGHTS INTO HOW IT RECOGNIZES THE 5'-END OF JRNL TITL 3 THE RNA SUBSTRATE. JRNL REF J.BIOL.CHEM. V. 295 9076 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32381506 JRNL DOI 10.1074/JBC.RA119.011811 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 13615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.640 REMARK 3 FREE R VALUE TEST SET COUNT : 632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8900 - 4.4500 0.99 2624 129 0.2023 0.2788 REMARK 3 2 4.4500 - 3.5300 1.00 2606 121 0.2110 0.2440 REMARK 3 3 3.5300 - 3.0800 1.00 2594 125 0.2603 0.2957 REMARK 3 4 3.0800 - 2.8000 1.00 2575 130 0.3073 0.3630 REMARK 3 5 2.8000 - 2.6000 1.00 2584 127 0.3298 0.4038 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.354 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.606 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2894 REMARK 3 ANGLE : 0.570 3911 REMARK 3 CHIRALITY : 0.043 459 REMARK 3 PLANARITY : 0.003 496 REMARK 3 DIHEDRAL : 8.989 1743 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.8129 -11.9745 9.3178 REMARK 3 T TENSOR REMARK 3 T11: 0.4304 T22: 0.6686 REMARK 3 T33: 0.4796 T12: 0.0917 REMARK 3 T13: 0.0684 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 5.0074 L22: 1.9985 REMARK 3 L33: 9.0271 L12: 3.1833 REMARK 3 L13: -0.9120 L23: -0.1456 REMARK 3 S TENSOR REMARK 3 S11: 0.0218 S12: -1.6264 S13: 0.1295 REMARK 3 S21: 0.8382 S22: -0.1316 S23: 0.4509 REMARK 3 S31: 0.4937 S32: -0.9241 S33: -0.1740 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3258 -12.0503 8.5008 REMARK 3 T TENSOR REMARK 3 T11: 0.5719 T22: 0.3230 REMARK 3 T33: 0.4303 T12: 0.0760 REMARK 3 T13: -0.0103 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 5.2429 L22: 2.4568 REMARK 3 L33: 2.2147 L12: -3.5216 REMARK 3 L13: 1.4770 L23: -0.1661 REMARK 3 S TENSOR REMARK 3 S11: -0.5499 S12: -0.7657 S13: 0.1640 REMARK 3 S21: 0.4838 S22: 0.5956 S23: -0.4108 REMARK 3 S31: -0.3144 S32: 0.0184 S33: -0.0334 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0936 -11.7793 1.1174 REMARK 3 T TENSOR REMARK 3 T11: 0.3078 T22: 0.3616 REMARK 3 T33: 0.3472 T12: 0.0259 REMARK 3 T13: -0.0476 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 2.2858 L22: 3.9873 REMARK 3 L33: 3.0639 L12: 0.8389 REMARK 3 L13: -1.8103 L23: 0.0859 REMARK 3 S TENSOR REMARK 3 S11: 0.0490 S12: -0.1239 S13: 0.0338 REMARK 3 S21: 0.2601 S22: 0.0260 S23: -0.5068 REMARK 3 S31: -0.1570 S32: 0.3124 S33: 0.0215 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6095 -13.5566 6.2687 REMARK 3 T TENSOR REMARK 3 T11: 0.4104 T22: 0.2824 REMARK 3 T33: 0.4113 T12: -0.0080 REMARK 3 T13: 0.0351 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.1856 L22: 3.2222 REMARK 3 L33: 3.1221 L12: -1.0938 REMARK 3 L13: -0.6988 L23: -0.2606 REMARK 3 S TENSOR REMARK 3 S11: 0.0140 S12: 0.0619 S13: 0.1145 REMARK 3 S21: 0.0918 S22: -0.1234 S23: -0.2638 REMARK 3 S31: -0.1077 S32: 0.0525 S33: 0.2269 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 190 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1563 -15.6492 3.1297 REMARK 3 T TENSOR REMARK 3 T11: 0.3589 T22: 0.3240 REMARK 3 T33: 0.3027 T12: -0.0145 REMARK 3 T13: 0.0229 T23: 0.0414 REMARK 3 L TENSOR REMARK 3 L11: 8.3236 L22: 4.1158 REMARK 3 L33: 6.9056 L12: -1.6367 REMARK 3 L13: 4.1850 L23: -0.3473 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: 0.2100 S13: 0.0288 REMARK 3 S21: 0.1191 S22: -0.0133 S23: -0.5278 REMARK 3 S31: -0.0488 S32: 0.5650 S33: 0.1997 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1514 -15.8538 1.5737 REMARK 3 T TENSOR REMARK 3 T11: 0.3812 T22: 0.3601 REMARK 3 T33: 0.2657 T12: -0.0463 REMARK 3 T13: -0.0015 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 8.7268 L22: 4.0910 REMARK 3 L33: 5.8289 L12: -3.3350 REMARK 3 L13: 0.9256 L23: -1.5935 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: -0.2006 S13: 0.0084 REMARK 3 S21: -0.0989 S22: 0.0335 S23: 0.0827 REMARK 3 S31: -0.0818 S32: -0.7220 S33: -0.0968 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7727 -17.4651 46.0756 REMARK 3 T TENSOR REMARK 3 T11: 0.6001 T22: 0.4949 REMARK 3 T33: 0.4247 T12: 0.0691 REMARK 3 T13: 0.0607 T23: -0.0758 REMARK 3 L TENSOR REMARK 3 L11: 6.2409 L22: 4.9363 REMARK 3 L33: 5.1134 L12: 0.1455 REMARK 3 L13: 0.5168 L23: 1.3733 REMARK 3 S TENSOR REMARK 3 S11: -0.0244 S12: -0.6657 S13: 0.9130 REMARK 3 S21: 0.1831 S22: 0.5023 S23: 1.1419 REMARK 3 S31: -1.5513 S32: 0.5120 S33: -0.0572 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0277 -19.0091 26.8941 REMARK 3 T TENSOR REMARK 3 T11: 0.3337 T22: 0.3512 REMARK 3 T33: 0.3457 T12: 0.0066 REMARK 3 T13: -0.0140 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 1.9102 L22: 2.7829 REMARK 3 L33: 3.2574 L12: 0.3761 REMARK 3 L13: -1.6755 L23: 0.4355 REMARK 3 S TENSOR REMARK 3 S11: -0.1109 S12: 0.3901 S13: -0.1719 REMARK 3 S21: -0.2608 S22: 0.0411 S23: 0.2186 REMARK 3 S31: 0.1293 S32: -0.4588 S33: 0.0659 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.7482 -26.9841 24.0408 REMARK 3 T TENSOR REMARK 3 T11: 0.6840 T22: 0.4174 REMARK 3 T33: 0.5084 T12: 0.0648 REMARK 3 T13: 0.0991 T23: -0.0853 REMARK 3 L TENSOR REMARK 3 L11: 1.5849 L22: 4.7893 REMARK 3 L33: 7.0619 L12: -0.0183 REMARK 3 L13: 1.2370 L23: 3.2303 REMARK 3 S TENSOR REMARK 3 S11: 0.0078 S12: 0.2691 S13: -0.4515 REMARK 3 S21: -0.5099 S22: -0.3385 S23: 0.4055 REMARK 3 S31: -0.0570 S32: -1.2354 S33: 0.2045 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 147 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2438 -16.4657 37.2718 REMARK 3 T TENSOR REMARK 3 T11: 0.4382 T22: 0.3801 REMARK 3 T33: 0.3114 T12: -0.0917 REMARK 3 T13: 0.1298 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 3.1756 L22: 7.6451 REMARK 3 L33: 2.5912 L12: -3.1141 REMARK 3 L13: 0.1455 L23: -2.2253 REMARK 3 S TENSOR REMARK 3 S11: 0.3763 S12: 0.5727 S13: -0.0741 REMARK 3 S21: -0.6988 S22: -0.6664 S23: -0.3727 REMARK 3 S31: -0.0856 S32: -0.2823 S33: 0.2276 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 164 THROUGH 223 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9389 -19.3023 25.6028 REMARK 3 T TENSOR REMARK 3 T11: 0.4170 T22: 0.4174 REMARK 3 T33: 0.3113 T12: 0.0220 REMARK 3 T13: 0.1256 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 2.3984 L22: 3.7729 REMARK 3 L33: 1.0033 L12: 0.0575 REMARK 3 L13: 0.5153 L23: 1.3695 REMARK 3 S TENSOR REMARK 3 S11: -0.0157 S12: 0.0268 S13: -0.3048 REMARK 3 S21: -0.3088 S22: -0.0738 S23: -0.0329 REMARK 3 S31: 0.0118 S32: -0.2729 S33: 0.0812 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 224 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3706 -11.2578 36.0374 REMARK 3 T TENSOR REMARK 3 T11: 0.4510 T22: 0.3602 REMARK 3 T33: 0.3073 T12: -0.0807 REMARK 3 T13: 0.0627 T23: -0.0572 REMARK 3 L TENSOR REMARK 3 L11: 3.5177 L22: 4.8335 REMARK 3 L33: 5.4692 L12: -1.9420 REMARK 3 L13: 1.6063 L23: -1.4588 REMARK 3 S TENSOR REMARK 3 S11: 0.1678 S12: -0.3000 S13: -0.0228 REMARK 3 S21: -0.4775 S22: -0.1361 S23: -0.1535 REMARK 3 S31: -0.7889 S32: 0.1578 S33: 0.2720 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6L7W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300014195. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 - 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13646 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 47.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.12100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.86000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: D_1300014194 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES-NAOH, PEG 20000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.60400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 14 REMARK 465 PRO A 15 REMARK 465 GLY A 16 REMARK 465 SER A 17 REMARK 465 LYS A 72 REMARK 465 VAL A 73 REMARK 465 GLU A 74 REMARK 465 GLU A 75 REMARK 465 ASP A 76 REMARK 465 ALA A 77 REMARK 465 ASN A 78 REMARK 465 ASP A 166 REMARK 465 LEU A 167 REMARK 465 ARG A 168 REMARK 465 PHE A 169 REMARK 465 SER A 170 REMARK 465 GLY A 171 REMARK 465 ALA A 172 REMARK 465 GLY A 173 REMARK 465 PRO A 174 REMARK 465 ARG A 175 REMARK 465 ALA A 176 REMARK 465 GLY A 177 REMARK 465 ASN A 243 REMARK 465 GLY B 14 REMARK 465 PRO B 15 REMARK 465 GLY B 16 REMARK 465 SER B 17 REMARK 465 ASP B 18 REMARK 465 ALA B 19 REMARK 465 VAL B 73 REMARK 465 GLU B 74 REMARK 465 GLU B 75 REMARK 465 ASP B 76 REMARK 465 ALA B 77 REMARK 465 ASN B 78 REMARK 465 ARG B 115 REMARK 465 GLY B 165 REMARK 465 ASP B 166 REMARK 465 LEU B 167 REMARK 465 ARG B 168 REMARK 465 PHE B 169 REMARK 465 SER B 170 REMARK 465 GLY B 171 REMARK 465 ALA B 172 REMARK 465 GLY B 173 REMARK 465 PRO B 174 REMARK 465 ARG B 175 REMARK 465 ALA B 176 REMARK 465 GLY B 177 REMARK 465 HIS B 178 REMARK 465 THR B 179 REMARK 465 SER B 216 REMARK 465 SER B 217 REMARK 465 HIS B 218 REMARK 465 ASN B 243 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 18 CG OD1 OD2 REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 114 CG CD1 CD2 REMARK 470 ARG A 115 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 131 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 LYS A 202 CG CD CE NZ REMARK 470 LYS A 220 CG CD CE NZ REMARK 470 ARG B 22 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 LYS B 34 CG CD CE NZ REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 GLU B 100 CG CD OE1 OE2 REMARK 470 ARG B 137 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 ARG B 180 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 201 CG CD OE1 OE2 REMARK 470 LYS B 202 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 19 -19.02 78.87 REMARK 500 GLN A 21 -4.84 -59.18 REMARK 500 ARG A 131 142.78 74.22 REMARK 500 THR B 130 -113.86 -107.41 REMARK 500 LEU B 222 92.75 -69.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 42 OE1 REMARK 620 2 GLU A 44 OE2 104.2 REMARK 620 3 GLU A 212 OE2 76.2 92.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 44 OE2 REMARK 620 2 GLU B 212 OE1 84.5 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 301 DBREF 6L7W A 18 243 UNP Q4E2I1 Q4E2I1_TRYCC 18 243 DBREF 6L7W B 18 243 UNP Q4E2I1 Q4E2I1_TRYCC 18 243 SEQADV 6L7W GLY A 14 UNP Q4E2I1 EXPRESSION TAG SEQADV 6L7W PRO A 15 UNP Q4E2I1 EXPRESSION TAG SEQADV 6L7W GLY A 16 UNP Q4E2I1 EXPRESSION TAG SEQADV 6L7W SER A 17 UNP Q4E2I1 EXPRESSION TAG SEQADV 6L7W A UNP Q4E2I1 ASP 55 DELETION SEQADV 6L7W A UNP Q4E2I1 ALA 56 DELETION SEQADV 6L7W A UNP Q4E2I1 LEU 57 DELETION SEQADV 6L7W A UNP Q4E2I1 ARG 58 DELETION SEQADV 6L7W A UNP Q4E2I1 GLU 59 DELETION SEQADV 6L7W A UNP Q4E2I1 ASN 60 DELETION SEQADV 6L7W A UNP Q4E2I1 THR 61 DELETION SEQADV 6L7W A UNP Q4E2I1 SER 62 DELETION SEQADV 6L7W A UNP Q4E2I1 ASP 63 DELETION SEQADV 6L7W A UNP Q4E2I1 GLN 64 DELETION SEQADV 6L7W A UNP Q4E2I1 ASN 65 DELETION SEQADV 6L7W A UNP Q4E2I1 GLY 66 DELETION SEQADV 6L7W A UNP Q4E2I1 ALA 67 DELETION SEQADV 6L7W A UNP Q4E2I1 GLN 68 DELETION SEQADV 6L7W A UNP Q4E2I1 THR 69 DELETION SEQADV 6L7W A UNP Q4E2I1 ASN 70 DELETION SEQADV 6L7W A UNP Q4E2I1 GLY 71 DELETION SEQADV 6L7W A UNP Q4E2I1 LEU 72 DELETION SEQADV 6L7W A UNP Q4E2I1 ARG 73 DELETION SEQADV 6L7W A UNP Q4E2I1 ILE 74 DELETION SEQADV 6L7W A UNP Q4E2I1 VAL 75 DELETION SEQADV 6L7W ASN A 126 UNP Q4E2I1 ASP 126 ENGINEERED MUTATION SEQADV 6L7W GLY B 14 UNP Q4E2I1 EXPRESSION TAG SEQADV 6L7W PRO B 15 UNP Q4E2I1 EXPRESSION TAG SEQADV 6L7W GLY B 16 UNP Q4E2I1 EXPRESSION TAG SEQADV 6L7W SER B 17 UNP Q4E2I1 EXPRESSION TAG SEQADV 6L7W B UNP Q4E2I1 ASP 55 DELETION SEQADV 6L7W B UNP Q4E2I1 ALA 56 DELETION SEQADV 6L7W B UNP Q4E2I1 LEU 57 DELETION SEQADV 6L7W B UNP Q4E2I1 ARG 58 DELETION SEQADV 6L7W B UNP Q4E2I1 GLU 59 DELETION SEQADV 6L7W B UNP Q4E2I1 ASN 60 DELETION SEQADV 6L7W B UNP Q4E2I1 THR 61 DELETION SEQADV 6L7W B UNP Q4E2I1 SER 62 DELETION SEQADV 6L7W B UNP Q4E2I1 ASP 63 DELETION SEQADV 6L7W B UNP Q4E2I1 GLN 64 DELETION SEQADV 6L7W B UNP Q4E2I1 ASN 65 DELETION SEQADV 6L7W B UNP Q4E2I1 GLY 66 DELETION SEQADV 6L7W B UNP Q4E2I1 ALA 67 DELETION SEQADV 6L7W B UNP Q4E2I1 GLN 68 DELETION SEQADV 6L7W B UNP Q4E2I1 THR 69 DELETION SEQADV 6L7W B UNP Q4E2I1 ASN 70 DELETION SEQADV 6L7W B UNP Q4E2I1 GLY 71 DELETION SEQADV 6L7W B UNP Q4E2I1 LEU 72 DELETION SEQADV 6L7W B UNP Q4E2I1 ARG 73 DELETION SEQADV 6L7W B UNP Q4E2I1 ILE 74 DELETION SEQADV 6L7W B UNP Q4E2I1 VAL 75 DELETION SEQADV 6L7W ASN B 126 UNP Q4E2I1 ASP 126 ENGINEERED MUTATION SEQRES 1 A 209 GLY PRO GLY SER ASP ALA GLU GLN ARG ALA VAL ALA LYS SEQRES 2 A 209 ALA LEU PHE ASP ALA VAL ASN LYS HIS LEU SER ASN PRO SEQRES 3 A 209 PHE ILE GLU VAL GLU MET ARG LEU GLY GLN PHE LYS VAL SEQRES 4 A 209 GLU GLU ASP ALA ASN PHE THR ALA CYS VAL SER THR GLU SEQRES 5 A 209 ASP TYR GLU ARG ILE LYS THR TYR LEU MET THR GLU MET SEQRES 6 A 209 GLU ASN SER SER MET THR ARG SER VAL THR HIS ASP VAL SEQRES 7 A 209 SER LEU ARG GLY TRP ARG HIS THR TYR ALA THR ASP GLU SEQRES 8 A 209 ASN GLY ASN PRO THR ARG CYS VAL SER ILE VAL ARG LYS SEQRES 9 A 209 LYS ARG LEU PHE VAL LYS ASN ILE VAL VAL PRO LEU GLY SEQRES 10 A 209 ALA TYR ASN LEU ARG PHE ALA VAL SER THR GLU THR PRO SEQRES 11 A 209 GLY ASP LEU ARG PHE SER GLY ALA GLY PRO ARG ALA GLY SEQRES 12 A 209 HIS THR ARG LEU LYS ASP ARG LEU SER ILE THR ASP GLY SEQRES 13 A 209 MET PHE ARG TYR ASP MET THR GLN VAL THR GLU LYS GLY SEQRES 14 A 209 VAL LEU MET HIS GLU VAL GLU ILE GLU GLY VAL PHE SER SEQRES 15 A 209 SER HIS GLU LYS GLN LEU THR GLU SER TRP LEU GLU GLU SEQRES 16 A 209 LEU LEU ARG ARG ALA MET ARG LEU ALA THR LEU ARG THR SEQRES 17 A 209 ASN SEQRES 1 B 209 GLY PRO GLY SER ASP ALA GLU GLN ARG ALA VAL ALA LYS SEQRES 2 B 209 ALA LEU PHE ASP ALA VAL ASN LYS HIS LEU SER ASN PRO SEQRES 3 B 209 PHE ILE GLU VAL GLU MET ARG LEU GLY GLN PHE LYS VAL SEQRES 4 B 209 GLU GLU ASP ALA ASN PHE THR ALA CYS VAL SER THR GLU SEQRES 5 B 209 ASP TYR GLU ARG ILE LYS THR TYR LEU MET THR GLU MET SEQRES 6 B 209 GLU ASN SER SER MET THR ARG SER VAL THR HIS ASP VAL SEQRES 7 B 209 SER LEU ARG GLY TRP ARG HIS THR TYR ALA THR ASP GLU SEQRES 8 B 209 ASN GLY ASN PRO THR ARG CYS VAL SER ILE VAL ARG LYS SEQRES 9 B 209 LYS ARG LEU PHE VAL LYS ASN ILE VAL VAL PRO LEU GLY SEQRES 10 B 209 ALA TYR ASN LEU ARG PHE ALA VAL SER THR GLU THR PRO SEQRES 11 B 209 GLY ASP LEU ARG PHE SER GLY ALA GLY PRO ARG ALA GLY SEQRES 12 B 209 HIS THR ARG LEU LYS ASP ARG LEU SER ILE THR ASP GLY SEQRES 13 B 209 MET PHE ARG TYR ASP MET THR GLN VAL THR GLU LYS GLY SEQRES 14 B 209 VAL LEU MET HIS GLU VAL GLU ILE GLU GLY VAL PHE SER SEQRES 15 B 209 SER HIS GLU LYS GLN LEU THR GLU SER TRP LEU GLU GLU SEQRES 16 B 209 LEU LEU ARG ARG ALA MET ARG LEU ALA THR LEU ARG THR SEQRES 17 B 209 ASN HET MN A 301 1 HET MN B 301 1 HETNAM MN MANGANESE (II) ION FORMUL 3 MN 2(MN 2+) FORMUL 5 HOH *41(H2 O) HELIX 1 AA1 GLU A 20 ASN A 33 1 14 HELIX 2 AA2 LYS A 34 LEU A 36 5 3 HELIX 3 AA3 SER A 84 MET A 99 1 16 HELIX 4 AA4 SER A 217 LEU A 222 1 6 HELIX 5 AA5 THR A 223 THR A 239 1 17 HELIX 6 AA6 GLN B 21 ALA B 31 1 11 HELIX 7 AA7 SER B 84 MET B 99 1 16 HELIX 8 AA8 THR B 223 THR B 239 1 17 SHEET 1 AA118 PRO A 129 ILE A 146 0 SHEET 2 AA118 TRP A 117 THR A 123 -1 N ARG A 118 O VAL A 136 SHEET 3 AA118 SER A 103 LEU A 114 -1 N VAL A 112 O HIS A 119 SHEET 4 AA118 ARG A 180 ASP A 189 -1 O THR A 188 N SER A 103 SHEET 5 AA118 PHE A 192 GLU A 201 -1 O TYR A 194 N ILE A 187 SHEET 6 AA118 VAL A 204 GLY A 213 -1 O GLU A 210 N ASP A 195 SHEET 7 AA118 ILE A 41 GLY A 48 -1 N LEU A 47 O VAL A 209 SHEET 8 AA118 ASN A 154 PRO A 164 -1 O SER A 160 N GLU A 42 SHEET 9 AA118 PRO A 129 ILE A 146 -1 N PHE A 142 O VAL A 159 SHEET 10 AA118 SER B 103 VAL B 112 1 O MET B 104 N ASN A 145 SHEET 11 AA118 LEU B 181 ASP B 189 -1 O SER B 186 N THR B 105 SHEET 12 AA118 PHE B 192 GLU B 201 -1 O MET B 196 N LEU B 185 SHEET 13 AA118 VAL B 204 GLY B 213 -1 O MET B 206 N VAL B 199 SHEET 14 AA118 ILE B 41 GLY B 48 -1 N MET B 45 O ILE B 211 SHEET 15 AA118 ASN B 154 THR B 163 -1 O ARG B 156 N ARG B 46 SHEET 16 AA118 PRO B 129 ILE B 146 -1 N ILE B 146 O LEU B 155 SHEET 17 AA118 TRP B 117 THR B 123 -1 N ARG B 118 O VAL B 136 SHEET 18 AA118 SER B 103 VAL B 112 -1 N HIS B 110 O TYR B 121 LINK OE1 GLU A 42 MN MN A 301 1555 1555 2.20 LINK OE2 GLU A 44 MN MN A 301 1555 1555 2.13 LINK OE2 GLU A 212 MN MN A 301 1555 1555 2.13 LINK OE2 GLU B 44 MN MN B 301 1555 1555 2.15 LINK OE1 GLU B 212 MN MN B 301 1555 1555 2.15 SITE 1 AC1 3 GLU A 42 GLU A 44 GLU A 212 SITE 1 AC2 4 GLU B 42 GLU B 44 GLU B 212 HOH B 422 CRYST1 52.445 73.208 63.747 90.00 114.06 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019068 0.000000 0.008515 0.00000 SCALE2 0.000000 0.013660 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017180 0.00000